Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53461.t1 | XP_003613199.1 | 99.8 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 2.00E-240 | 841.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53461.t1 | Q9SGY2 | 88.2 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 1.7e-219 | 763.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53461.t1 | G7K076 | 99.8 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 1.5e-240 | 841.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050521 | MS.gene53461 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene050818 | MS.gene53461 | 0.808947 | 2.41E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene53461 | 0.814113 | 1.82E-51 | -1.69E-46 |
| MS.gene058996 | MS.gene53461 | 0.802444 | 5.59E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene53461 | 0.810869 | 9.30E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53461 | MS.gene60924 | PPI |
| MS.gene065831 | MS.gene53461 | PPI |
| MS.gene53461 | MS.gene60923 | PPI |
| MS.gene027658 | MS.gene53461 | PPI |
| MS.gene80717 | MS.gene53461 | PPI |
| MS.gene53461 | MS.gene44351 | PPI |
| MS.gene92246 | MS.gene53461 | PPI |
| MS.gene90397 | MS.gene53461 | PPI |
| MS.gene60924 | MS.gene53461 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53461.t1 | MTR_5g033920 | 99.764 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 0.0 | 866 |
| MS.gene53461.t1 | MTR_5g033920 | 98.140 | 430 | 1 | 1 | 1 | 423 | 1 | 430 | 0.0 | 857 |
| MS.gene53461.t1 | MTR_2g062920 | 91.726 | 423 | 35 | 0 | 1 | 423 | 1 | 423 | 0.0 | 801 |
| MS.gene53461.t1 | MTR_2g062920 | 92.562 | 363 | 27 | 0 | 61 | 423 | 1 | 363 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53461.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene53461.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene53461.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene53461.t1 | AT1G60810 | 87.234 | 423 | 54 | 0 | 1 | 423 | 1 | 423 | 0.0 | 776 |
| MS.gene53461.t1 | AT1G60810 | 87.234 | 423 | 54 | 0 | 1 | 423 | 1 | 423 | 0.0 | 776 |
| MS.gene53461.t1 | AT1G10670 | 84.199 | 443 | 50 | 1 | 1 | 423 | 1 | 443 | 0.0 | 767 |
| MS.gene53461.t1 | AT1G09430 | 81.862 | 419 | 76 | 0 | 1 | 419 | 1 | 419 | 0.0 | 736 |
Find 100 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTTTGTTACAGGTTTA+TGG | 0.135148 | 5.3:-23013625 | MS.gene53461:intron |
| GAGCACTTTAAGAGACTTTC+TGG | 0.142923 | 5.3:-23017929 | MS.gene53461:CDS |
| GTGAAACCTGACATGTTATT+TGG | 0.166150 | 5.3:-23017018 | MS.gene53461:CDS |
| ATGGCTTTCTTCTTCTAAAT+TGG | 0.172223 | 5.3:-23017043 | MS.gene53461:CDS |
| TTTCCATCAACCAATGTAAA+AGG | 0.245174 | 5.3:+23016070 | None:intergenic |
| GCCACTGAGTCTTTCATTCA+TGG | 0.261851 | 5.3:-23015832 | MS.gene53461:CDS |
| TGGTTTGGTTGCCTTGAATT+TGG | 0.268556 | 5.3:-23016980 | MS.gene53461:CDS |
| TGAACCCAAAGGGCCGAATT+TGG | 0.281078 | 5.3:-23014950 | MS.gene53461:CDS |
| CGAATTTGGACAATGGTTGC+TGG | 0.300252 | 5.3:-23014936 | MS.gene53461:CDS |
| GAATCGATATTGAAGAGAAT+TGG | 0.314663 | 5.3:-23016634 | MS.gene53461:CDS |
| ATTGAAAATATAGGTTGAAA+TGG | 0.324243 | 5.3:-23016780 | MS.gene53461:intron |
| TTCAATTAGCTAACCTCAAT+CGG | 0.325607 | 5.3:+23013736 | None:intergenic |
| GATCCAGGAATCAAAGTTAA+AGG | 0.325987 | 5.3:-23013851 | MS.gene53461:intron |
| CGAGCACTTGGAGAGGAAAT+TGG | 0.328982 | 5.3:-23013763 | MS.gene53461:CDS |
| GGTTGCCTTGAATTTGGATT+TGG | 0.332415 | 5.3:-23016974 | MS.gene53461:CDS |
| TTGTCCAAATTCGGCCCTTT+GGG | 0.337602 | 5.3:+23014946 | None:intergenic |
| TTAATACAGGTAGGCGATCT+TGG | 0.342068 | 5.3:-23014794 | MS.gene53461:intron |
| ATTGTCCAAATTCGGCCCTT+TGG | 0.347305 | 5.3:+23014945 | None:intergenic |
| ATACCAGTCATTGTTGCTTC+AGG | 0.359407 | 5.3:+23013601 | None:intergenic |
| CTGCAAAACCTCCTCTTCAT+TGG | 0.362473 | 5.3:+23014727 | None:intergenic |
| TGATGGAAAGCCTTATCCTT+TGG | 0.370162 | 5.3:-23016056 | MS.gene53461:CDS |
| CAGCAACCATTGTCCAAATT+CGG | 0.373694 | 5.3:+23014937 | None:intergenic |
| CTTACTTGTGCAGACTTGAT+AGG | 0.377362 | 5.3:+23017896 | None:intergenic |
| ACTTGTTGCAACCCTTCCCT+TGG | 0.384681 | 5.3:-23016440 | MS.gene53461:CDS |
| CTTGGCTTTGCAAATGAGCT+TGG | 0.386907 | 5.3:-23014776 | MS.gene53461:CDS |
| TTGAAAATATAGGTTGAAAT+GGG | 0.391559 | 5.3:-23016779 | MS.gene53461:intron |
| AATCGATATTGAAGAGAATT+GGG | 0.403789 | 5.3:-23016633 | MS.gene53461:CDS |
| CTTTCACAAATGAAGCAACT+TGG | 0.406529 | 5.3:+23016950 | None:intergenic |
| AGGTAATACTCTTCATTATG+TGG | 0.426783 | 5.3:+23016710 | None:intergenic |
| ATTGAATTTCCATTGCCATT+TGG | 0.427635 | 5.3:-23015868 | MS.gene53461:CDS |
| TCAACAATGAAAGTTGTTAT+CGG | 0.431360 | 5.3:+23016743 | None:intergenic |
| TGAAACCTGACATGTTATTT+GGG | 0.440993 | 5.3:-23017017 | MS.gene53461:CDS |
| CGCTTCCCAAATAACATGTC+AGG | 0.451633 | 5.3:+23017012 | None:intergenic |
| ATAGATCAAGGGAGAAATTG+AGG | 0.459317 | 5.3:-23016296 | MS.gene53461:intron |
| CATTCATGGATTAGATGAAA+AGG | 0.460623 | 5.3:-23015818 | MS.gene53461:intron |
| TGTTGCAACCCTTCCCTTGG+AGG | 0.460679 | 5.3:-23016437 | MS.gene53461:intron |
| TGGCATAATTCGGGCACTAA+AGG | 0.461705 | 5.3:-23013962 | MS.gene53461:CDS |
| TGCAAAACCTCCTCTTCATT+GGG | 0.463887 | 5.3:+23014728 | None:intergenic |
| GAATTTGGACAATGGTTGCT+GGG | 0.465292 | 5.3:-23014935 | MS.gene53461:CDS |
| TTTGGGAAGCGTGGTAAAAG+TGG | 0.468444 | 5.3:-23017000 | MS.gene53461:CDS |
| TAAATTGAATTTACCTCCAA+GGG | 0.486977 | 5.3:+23016424 | None:intergenic |
| AATGACTGGTATATGCAAAC+AGG | 0.488870 | 5.3:-23013590 | MS.gene53461:CDS |
| AATTTCCATTGCCATTTGGA+AGG | 0.489649 | 5.3:-23015864 | MS.gene53461:CDS |
| CCTCTCATATCCAAAGGATA+AGG | 0.491900 | 5.3:+23016046 | None:intergenic |
| TGATTCTAAGAGATTGTTGA+AGG | 0.494704 | 5.3:-23017951 | MS.gene53461:CDS |
| ACTTACATCAATTACAACTC+TGG | 0.505750 | 5.3:+23014700 | None:intergenic |
| TTGGGCCAAATCCAAATTCA+AGG | 0.506250 | 5.3:+23016969 | None:intergenic |
| TTCACTGTGTTGAACCCAAA+GGG | 0.510313 | 5.3:-23014960 | MS.gene53461:CDS |
| GGAAATTGGCATCCCGATTG+AGG | 0.511227 | 5.3:-23013749 | MS.gene53461:intron |
| GTCTGTCAGAGACAATGTTA+AGG | 0.515654 | 5.3:+23016690 | None:intergenic |
| GGAAACTATGCAGAATATAG+TGG | 0.517156 | 5.3:-23014755 | MS.gene53461:CDS |
| GAAGCGTGGTAAAAGTGGTT+TGG | 0.519204 | 5.3:-23016995 | MS.gene53461:CDS |
| TCAATTAGCTAACCTCAATC+GGG | 0.519937 | 5.3:+23013737 | None:intergenic |
| TCTTCATTATGTGGGATGAA+AGG | 0.519980 | 5.3:+23016719 | None:intergenic |
| TTAAATTGAATTTACCTCCA+AGG | 0.523717 | 5.3:+23016423 | None:intergenic |
| TATTGAAGAGAATTGGGATA+AGG | 0.523886 | 5.3:-23016627 | MS.gene53461:intron |
| TTGAATTTACCTCCAAGGGA+AGG | 0.525190 | 5.3:+23016428 | None:intergenic |
| AGGGAAGGGTTGCAACAAGT+GGG | 0.528893 | 5.3:+23016443 | None:intergenic |
| GGTTGAAATGGGTGGATGCA+AGG | 0.529860 | 5.3:-23016768 | MS.gene53461:CDS |
| TTTCACAAATGAAGCAACTT+GGG | 0.530236 | 5.3:+23016951 | None:intergenic |
| GGTAATACTCTTCATTATGT+GGG | 0.530693 | 5.3:+23016711 | None:intergenic |
| AACATTGTCTCTGACAGACT+TGG | 0.532898 | 5.3:-23016686 | MS.gene53461:CDS |
| GAAAGAGCGTCTTGGTAAAG+AGG | 0.535308 | 5.3:-23016932 | MS.gene53461:intron |
| TGCACCTTTATGTGAGGCGA+GGG | 0.535874 | 5.3:-23013819 | MS.gene53461:CDS |
| TGAATTTACCTCCAAGGGAA+GGG | 0.537577 | 5.3:+23016429 | None:intergenic |
| GGACCTGAAGCAACAATGAC+TGG | 0.541528 | 5.3:-23013604 | MS.gene53461:CDS |
| AAGGGAAGGGTTGCAACAAG+TGG | 0.542096 | 5.3:+23016442 | None:intergenic |
| AGGGCTCTTGTTATAGGTGG+AGG | 0.545602 | 5.3:-23014021 | MS.gene53461:CDS |
| GCACTCATAACCCTTCCAAA+TGG | 0.556781 | 5.3:+23015853 | None:intergenic |
| ATTTCCATTGCCATTTGGAA+GGG | 0.562037 | 5.3:-23015863 | MS.gene53461:CDS |
| GTTGAAATGGGTGGATGCAA+GGG | 0.564098 | 5.3:-23016767 | MS.gene53461:CDS |
| TAGTGTCATCTACGCTGATA+CGG | 0.565668 | 5.3:-23014904 | MS.gene53461:intron |
| TCATTTGTGAAAGAGCGTCT+TGG | 0.569120 | 5.3:-23016940 | MS.gene53461:CDS |
| AGAAATTGAGGAATTTCTCA+AGG | 0.569980 | 5.3:-23016284 | MS.gene53461:CDS |
| ATAACCCTTCCAAATGGCAA+TGG | 0.584751 | 5.3:+23015859 | None:intergenic |
| AAAAGGGCTCTTGTTATAGG+TGG | 0.587346 | 5.3:-23014024 | MS.gene53461:CDS |
| AAAATATAGGTTGAAATGGG+TGG | 0.588383 | 5.3:-23016776 | MS.gene53461:intron |
| CCTTATCCTTTGGATATGAG+AGG | 0.593802 | 5.3:-23016046 | MS.gene53461:CDS |
| ACCTGAAATGGATAGTTAAG+CGG | 0.596270 | 5.3:+23013546 | None:intergenic |
| TGTGCAACTGCCGACCCCGA+TGG | 0.600634 | 5.3:-23014051 | MS.gene53461:CDS |
| AGCTCGCCTCTCATATCCAA+AGG | 0.606308 | 5.3:+23016040 | None:intergenic |
| GGGAAGGGTTGCAACAAGTG+GGG | 0.607919 | 5.3:+23016444 | None:intergenic |
| CTTTAAGAGACTTTCTGGCA+AGG | 0.607933 | 5.3:-23017924 | MS.gene53461:CDS |
| AATTCGGGCACTAAAGGAGA+AGG | 0.611871 | 5.3:-23013956 | MS.gene53461:intron |
| CACCTTTATGTGAGGCGAGG+GGG | 0.612540 | 5.3:-23013817 | MS.gene53461:CDS |
| AATTTGGACAATGGTTGCTG+GGG | 0.612808 | 5.3:-23014934 | MS.gene53461:CDS |
| TTTCACTGAGCTGCAAGACA+AGG | 0.614695 | 5.3:-23017070 | MS.gene53461:CDS |
| TAGTGGTGCACCCAATGAAG+AGG | 0.615153 | 5.3:-23014738 | MS.gene53461:CDS |
| ATGCACCTTTATGTGAGGCG+AGG | 0.615319 | 5.3:-23013820 | MS.gene53461:CDS |
| AGCTGCAAGACAAGGAACAA+TGG | 0.615951 | 5.3:-23017062 | MS.gene53461:CDS |
| AAAGGGCCGAATTTGGACAA+TGG | 0.617352 | 5.3:-23014943 | MS.gene53461:CDS |
| GATGTAAGAGACACTCCCGT+TGG | 0.624325 | 5.3:+23016478 | None:intergenic |
| ATTTGGACAATGGTTGCTGG+GGG | 0.626405 | 5.3:-23014933 | MS.gene53461:CDS |
| GACATGTTATTTGGGAAGCG+TGG | 0.630841 | 5.3:-23017009 | MS.gene53461:CDS |
| TGGTGCACCCAATGAAGAGG+AGG | 0.642713 | 5.3:-23014735 | MS.gene53461:CDS |
| CAAGAATGCACCTTTATGTG+AGG | 0.651491 | 5.3:-23013825 | MS.gene53461:CDS |
| ATTCACTGTGTTGAACCCAA+AGG | 0.654553 | 5.3:-23014961 | MS.gene53461:CDS |
| GCACCTTTATGTGAGGCGAG+GGG | 0.663860 | 5.3:-23013818 | MS.gene53461:CDS |
| TTGCAGCTCAGTGAAATCAG+TGG | 0.670844 | 5.3:+23017077 | None:intergenic |
| TCCATGAATGAAAGACTCAG+TGG | 0.707219 | 5.3:+23015831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATCTTTAAATTGAT+AGG | + | chr5.3:23016894-23016913 | None:intergenic | 10.0% |
| !! | TCAATTTAAAGATTTAATTA+TGG | - | chr5.3:23016895-23016914 | MS.gene53461:intron | 10.0% |
| !! | AAATATTAATTAATACAGGT+AGG | - | chr5.3:23016735-23016754 | MS.gene53461:CDS | 15.0% |
| !! | AACTTATAAGTTAGTTAATT+TGG | + | chr5.3:23017211-23017230 | None:intergenic | 15.0% |
| !! | TGCTAAATATTAATTAATAC+AGG | - | chr5.3:23016731-23016750 | MS.gene53461:CDS | 15.0% |
| !! | TTGAATAAAATTGTACATTT+AGG | + | chr5.3:23015765-23015784 | None:intergenic | 15.0% |
| !! | TTGTTCAATACAATAAATAA+AGG | + | chr5.3:23017835-23017854 | None:intergenic | 15.0% |
| !!! | TCTATTTCTTAAATTATTAC+TGG | - | chr5.3:23016431-23016450 | MS.gene53461:intron | 15.0% |
| !!! | TTTATTTTGAACTTATCTTA+TGG | + | chr5.3:23014301-23014320 | None:intergenic | 15.0% |
| !!! | TTTTGTGATAAATTTTTAAG+TGG | - | chr5.3:23013765-23013784 | MS.gene53461:CDS | 15.0% |
| !! | AAAATATATCAATGGTTGAA+AGG | + | chr5.3:23014726-23014745 | None:intergenic | 20.0% |
| !! | AAATATATCAATGGTTGAAA+GGG | + | chr5.3:23014725-23014744 | None:intergenic | 20.0% |
| !! | AAATTGGTCCAATAAATTAT+TGG | + | chr5.3:23017163-23017182 | None:intergenic | 20.0% |
| !! | AAGGTAAACTAATATAACTT+TGG | - | chr5.3:23015739-23015758 | MS.gene53461:intron | 20.0% |
| !! | AATCTTAAAAGAAAACAGTA+CGG | + | chr5.3:23015384-23015403 | None:intergenic | 20.0% |
| !! | ACAAAAAATATGTACTTAAC+AGG | + | chr5.3:23015827-23015846 | None:intergenic | 20.0% |
| !! | ATAAGCTGAAAAATATCTTA+TGG | - | chr5.3:23014205-23014224 | MS.gene53461:intron | 20.0% |
| !! | TAAGCTGAAAAATATCTTAT+GGG | - | chr5.3:23014206-23014225 | MS.gene53461:intron | 20.0% |
| !! | TATTGTATTGAACAATCAAA+TGG | - | chr5.3:23017840-23017859 | MS.gene53461:intron | 20.0% |
| !! | TTGTTCGTAAAATAACAAAT+TGG | + | chr5.3:23015144-23015163 | None:intergenic | 20.0% |
| !!! | AATGTTATGTGTTATTTTGA+AGG | - | chr5.3:23015571-23015590 | MS.gene53461:intron | 20.0% |
| !!! | AGCAGTTTATTAATTCTTTT+TGG | - | chr5.3:23017890-23017909 | MS.gene53461:intron | 20.0% |
| !!! | ATCTTTTGCCAATAATTTAT+TGG | - | chr5.3:23017152-23017171 | MS.gene53461:intron | 20.0% |
| !!! | ATTGAAAATATAGGTTGAAA+TGG | - | chr5.3:23014758-23014777 | MS.gene53461:CDS | 20.0% |
| !!! | GTTTTTTTAACTTCTTACTT+GGG | - | chr5.3:23015845-23015864 | MS.gene53461:CDS | 20.0% |
| !!! | TGTTTTTTTAACTTCTTACT+TGG | - | chr5.3:23015844-23015863 | MS.gene53461:CDS | 20.0% |
| !!! | TTCACGACAATTTTTTTAAA+TGG | + | chr5.3:23013909-23013928 | None:intergenic | 20.0% |
| !!! | TTGAAAATATAGGTTGAAAT+GGG | - | chr5.3:23014759-23014778 | MS.gene53461:CDS | 20.0% |
| !!! | TTGTAATTTTGGTTAATTCA+GGG | - | chr5.3:23017292-23017311 | MS.gene53461:intron | 20.0% |
| !!! | TTTCATTGTCTTCATTTTAT+GGG | + | chr5.3:23016026-23016045 | None:intergenic | 20.0% |
| !!! | TTTGTAATTTTGGTTAATTC+AGG | - | chr5.3:23017291-23017310 | MS.gene53461:intron | 20.0% |
| !!! | TTTTTTTAACTTCTTACTTG+GGG | - | chr5.3:23015846-23015865 | MS.gene53461:CDS | 20.0% |
| ! | AATCGATATTGAAGAGAATT+GGG | - | chr5.3:23014905-23014924 | MS.gene53461:CDS | 25.0% |
| ! | AATGTAAGACAATGAATGTA+AGG | + | chr5.3:23014670-23014689 | None:intergenic | 25.0% |
| ! | ACAGAGAATGAAATGATAAT+CGG | - | chr5.3:23016101-23016120 | MS.gene53461:CDS | 25.0% |
| ! | ACGTGACTAAAATATATCAA+TGG | + | chr5.3:23014734-23014753 | None:intergenic | 25.0% |
| ! | ATATCTTTGTTACAGGTTTA+TGG | - | chr5.3:23017913-23017932 | MS.gene53461:CDS | 25.0% |
| ! | ATTATCCATAACCTTCAAAT+TGG | - | chr5.3:23015003-23015022 | MS.gene53461:intron | 25.0% |
| ! | CACGTGTTTATTGAAAATAT+AGG | - | chr5.3:23014749-23014768 | MS.gene53461:CDS | 25.0% |
| ! | TAAATTGAATTTACCTCCAA+GGG | + | chr5.3:23015117-23015136 | None:intergenic | 25.0% |
| ! | TAATAGGAAAAATTGTGTTG+AGG | - | chr5.3:23017867-23017886 | MS.gene53461:intron | 25.0% |
| ! | TCAACAATGAAAGTTGTTAT+CGG | + | chr5.3:23014798-23014817 | None:intergenic | 25.0% |
| ! | TCATCAATAAGTCATTGATA+CGG | + | chr5.3:23016466-23016485 | None:intergenic | 25.0% |
| ! | TCTTGTTAGTTCATACTAAT+GGG | - | chr5.3:23015596-23015615 | MS.gene53461:intron | 25.0% |
| ! | TTAAATTGAATTTACCTCCA+AGG | + | chr5.3:23015118-23015137 | None:intergenic | 25.0% |
| !! | AATAGAGTAAACACTCATTT+TGG | + | chr5.3:23017350-23017369 | None:intergenic | 25.0% |
| !! | GTAGGAGTAAACAATAATTT+TGG | - | chr5.3:23017053-23017072 | MS.gene53461:CDS | 25.0% |
| !! | GTGTAATTTAAAATGTTGCA+AGG | - | chr5.3:23015908-23015927 | MS.gene53461:intron | 25.0% |
| !! | GTTTCATTGTCTTCATTTTA+TGG | + | chr5.3:23016027-23016046 | None:intergenic | 25.0% |
| !! | TAAGAGAAAATTTTATGTGC+AGG | + | chr5.3:23014984-23015003 | None:intergenic | 25.0% |
| !! | TGATGTCTCTAAAAAACTAT+AGG | - | chr5.3:23016945-23016964 | MS.gene53461:CDS | 25.0% |
| !! | TTTTACGAACAAACTAACTT+TGG | - | chr5.3:23015152-23015171 | MS.gene53461:intron | 25.0% |
| !! | TTTTTGGATATCTTTGTTAC+AGG | - | chr5.3:23017906-23017925 | MS.gene53461:CDS | 25.0% |
| !!! | ATGTCACTTTTACTTAAAGT+AGG | - | chr5.3:23014032-23014051 | MS.gene53461:CDS | 25.0% |
| !!! | GCTTATTGATTTCTGAAAAA+TGG | + | chr5.3:23014353-23014372 | None:intergenic | 25.0% |
| !!! | TAAGACTGTTTTTATTCCAA+CGG | - | chr5.3:23015044-23015063 | MS.gene53461:intron | 25.0% |
| !!! | TTTTTTAACTTCTTACTTGG+GGG | - | chr5.3:23015847-23015866 | MS.gene53461:CDS | 25.0% |
| ACAATCAAATGGTGCTTAAT+AGG | - | chr5.3:23017851-23017870 | MS.gene53461:intron | 30.0% | |
| ACAATGAATGTAAGGTTTGA+AGG | + | chr5.3:23014662-23014681 | None:intergenic | 30.0% | |
| ACTTACATCAATTACAACTC+TGG | + | chr5.3:23016841-23016860 | None:intergenic | 30.0% | |
| AGAAATTGAGGAATTTCTCA+AGG | - | chr5.3:23015254-23015273 | MS.gene53461:intron | 30.0% | |
| AGCATATTAAGCACAATGTA+TGG | + | chr5.3:23014260-23014279 | None:intergenic | 30.0% | |
| AGGTAATACTCTTCATTATG+TGG | + | chr5.3:23014831-23014850 | None:intergenic | 30.0% | |
| ATATGACCAAACCAATTTGA+AGG | + | chr5.3:23015017-23015036 | None:intergenic | 30.0% | |
| ATGGCTTTCTTCTTCTAAAT+TGG | - | chr5.3:23014495-23014514 | MS.gene53461:intron | 30.0% | |
| ATTGAATGCAACTACATGTT+TGG | + | chr5.3:23016407-23016426 | None:intergenic | 30.0% | |
| ATTGAATTTCCATTGCCATT+TGG | - | chr5.3:23015670-23015689 | MS.gene53461:intron | 30.0% | |
| ATTGGCAAAAGATATACTCA+AGG | + | chr5.3:23017145-23017164 | None:intergenic | 30.0% | |
| CGTGTATGCAAGTTTAATAA+AGG | - | chr5.3:23014326-23014345 | MS.gene53461:intron | 30.0% | |
| GAATCGATATTGAAGAGAAT+TGG | - | chr5.3:23014904-23014923 | MS.gene53461:intron | 30.0% | |
| GATATCACTTGACATATTCA+AGG | - | chr5.3:23017323-23017342 | MS.gene53461:intron | 30.0% | |
| GGTAATACTCTTCATTATGT+GGG | + | chr5.3:23014830-23014849 | None:intergenic | 30.0% | |
| GTAGAAAGAACACAATTGAT+TGG | - | chr5.3:23013947-23013966 | MS.gene53461:intron | 30.0% | |
| GTTAATTATGTCCGAATTCA+TGG | - | chr5.3:23013809-23013828 | MS.gene53461:CDS | 30.0% | |
| TAACATATCCTAGAAGAAAG+TGG | + | chr5.3:23016300-23016319 | None:intergenic | 30.0% | |
| TACTACAATGGACATATTCA+AGG | - | chr5.3:23017254-23017273 | MS.gene53461:intron | 30.0% | |
| TATTGAAGAGAATTGGGATA+AGG | - | chr5.3:23014911-23014930 | MS.gene53461:CDS | 30.0% | |
| TATTGGACCAATTTGACTAA+TGG | - | chr5.3:23017169-23017188 | MS.gene53461:intron | 30.0% | |
| TTCAATTAGCTAACCTCAAT+CGG | + | chr5.3:23017805-23017824 | None:intergenic | 30.0% | |
| TTCACAAGTTATGAAACTGA+TGG | - | chr5.3:23015998-23016017 | MS.gene53461:intron | 30.0% | |
| TTGAATATGTCCATTGTAGT+AGG | + | chr5.3:23017255-23017274 | None:intergenic | 30.0% | |
| TTGAATGCAACTACATGTTT+GGG | + | chr5.3:23016406-23016425 | None:intergenic | 30.0% | |
| TTGGCAAAAGATATACTCAA+GGG | + | chr5.3:23017144-23017163 | None:intergenic | 30.0% | |
| TTTCAAGAACTTCAAGAAGT+AGG | - | chr5.3:23015536-23015555 | MS.gene53461:intron | 30.0% | |
| TTTCACAAATGAAGCAACTT+GGG | + | chr5.3:23014590-23014609 | None:intergenic | 30.0% | |
| TTTCCATCAACCAATGTAAA+AGG | + | chr5.3:23015471-23015490 | None:intergenic | 30.0% | |
| ! | AAAATATAGGTTGAAATGGG+TGG | - | chr5.3:23014762-23014781 | MS.gene53461:CDS | 30.0% |
| ! | AAGATGAAAAGTATGTGTTG+TGG | + | chr5.3:23014939-23014958 | None:intergenic | 30.0% |
| ! | AGAGATGAATCCTTTTACAT+TGG | - | chr5.3:23015458-23015477 | MS.gene53461:intron | 30.0% |
| ! | GTCTTGTTAGTTCATACTAA+TGG | - | chr5.3:23015595-23015614 | MS.gene53461:intron | 30.0% |
| ! | TACTTTTAGTGGCATAATTC+GGG | - | chr5.3:23017567-23017586 | MS.gene53461:intron | 30.0% |
| ! | TGAAACCTGACATGTTATTT+GGG | - | chr5.3:23014521-23014540 | MS.gene53461:intron | 30.0% |
| ! | TGATTCTAAGAGATTGTTGA+AGG | - | chr5.3:23013587-23013606 | MS.gene53461:CDS | 30.0% |
| ! | TTGTTGTTGTTGTATTCTGT+AGG | - | chr5.3:23017035-23017054 | MS.gene53461:CDS | 30.0% |
| ! | TTTTATGTGCAGGAAATAGA+TGG | + | chr5.3:23014974-23014993 | None:intergenic | 30.0% |
| ! | TTTTTGAACTATTGTGATCC+AGG | - | chr5.3:23017672-23017691 | MS.gene53461:intron | 30.0% |
| !! | AATCCTTTTACATTGGTTGA+TGG | - | chr5.3:23015465-23015484 | MS.gene53461:intron | 30.0% |
| !! | AATTGGTTTGGTCATATTTC+AGG | - | chr5.3:23015020-23015039 | MS.gene53461:intron | 30.0% |
| !! | ACTTTCTTCTAGGATATGTT+AGG | - | chr5.3:23016299-23016318 | MS.gene53461:intron | 30.0% |
| !! | AGTTTGTTAGCAAATGTGTT+AGG | + | chr5.3:23016168-23016187 | None:intergenic | 30.0% |
| !! | CATTCATGGATTAGATGAAA+AGG | - | chr5.3:23015720-23015739 | MS.gene53461:intron | 30.0% |
| !! | CTACTTTTAGTGGCATAATT+CGG | - | chr5.3:23017566-23017585 | MS.gene53461:intron | 30.0% |
| !! | GAAGTATTGTTGTTTCTGAT+AGG | + | chr5.3:23016328-23016347 | None:intergenic | 30.0% |
| !! | GTGATTTTCACTCTTTTTCA+AGG | - | chr5.3:23015276-23015295 | MS.gene53461:intron | 30.0% |
| !! | TTTTACTTTTCTGTCAGATC+TGG | - | chr5.3:23015422-23015441 | MS.gene53461:intron | 30.0% |
| !!! | AAGACTGTTTTTATTCCAAC+GGG | - | chr5.3:23015045-23015064 | MS.gene53461:intron | 30.0% |
| !!! | CTTGAGTATCGAATTTGTTT+TGG | - | chr5.3:23014415-23014434 | MS.gene53461:intron | 30.0% |
| !!! | GCACTGTTTTTATAGATCAA+GGG | - | chr5.3:23015231-23015250 | MS.gene53461:intron | 30.0% |
| !!! | TGCACTGTTTTTATAGATCA+AGG | - | chr5.3:23015230-23015249 | MS.gene53461:intron | 30.0% |
| !!! | TTGTTTTGGTTTGTGCTTTA+AGG | - | chr5.3:23014429-23014448 | MS.gene53461:intron | 30.0% |
| AACTGAACTCTCTGAATTCT+AGG | - | chr5.3:23016238-23016257 | MS.gene53461:intron | 35.0% | |
| AAGCAAAACTCTACTGTTGT+GGG | + | chr5.3:23017612-23017631 | None:intergenic | 35.0% | |
| AATGACTGGTATATGCAAAC+AGG | - | chr5.3:23017948-23017967 | MS.gene53461:CDS | 35.0% | |
| AATGTATATTAACACGCCAC+TGG | - | chr5.3:23015314-23015333 | MS.gene53461:intron | 35.0% | |
| AATTACACCAGATTCCTCTA+AGG | + | chr5.3:23015896-23015915 | None:intergenic | 35.0% | |
| AATTCAGAGAGTTCAGTTAC+AGG | + | chr5.3:23016236-23016255 | None:intergenic | 35.0% | |
| ACTAATGGAAGACACATTCA+AGG | - | chr5.3:23017184-23017203 | MS.gene53461:intron | 35.0% | |
| ACTGAACTCTCTGAATTCTA+GGG | - | chr5.3:23016239-23016258 | MS.gene53461:intron | 35.0% | |
| ATAGATCAAGGGAGAAATTG+AGG | - | chr5.3:23015242-23015261 | MS.gene53461:intron | 35.0% | |
| ATCTTCCCTAACCATGAATT+CGG | + | chr5.3:23013823-23013842 | None:intergenic | 35.0% | |
| ATTACACCAGATTCCTCTAA+GGG | + | chr5.3:23015895-23015914 | None:intergenic | 35.0% | |
| CCAAACCAATTTGAAGGTTA+TGG | + | chr5.3:23015011-23015030 | None:intergenic | 35.0% | |
| CCATAACCTTCAAATTGGTT+TGG | - | chr5.3:23015008-23015027 | MS.gene53461:intron | 35.0% | |
| CCATATGAGAGAAAATGAGT+TGG | + | chr5.3:23016275-23016294 | None:intergenic | 35.0% | |
| CTTTCACAAATGAAGCAACT+TGG | + | chr5.3:23014591-23014610 | None:intergenic | 35.0% | |
| GAATACAACAACAACAACCA+AGG | + | chr5.3:23017032-23017051 | None:intergenic | 35.0% | |
| GATCCAGGAATCAAAGTTAA+AGG | - | chr5.3:23017687-23017706 | MS.gene53461:intron | 35.0% | |
| GGAAACTATGCAGAATATAG+TGG | - | chr5.3:23016783-23016802 | MS.gene53461:intron | 35.0% | |
| GTGAAACCTGACATGTTATT+TGG | - | chr5.3:23014520-23014539 | MS.gene53461:intron | 35.0% | |
| GTGTCTTCCATTAGTCAAAT+TGG | + | chr5.3:23017179-23017198 | None:intergenic | 35.0% | |
| GTTACTTCAAGCTGCAAATA+TGG | + | chr5.3:23016703-23016722 | None:intergenic | 35.0% | |
| GTTAGTGCAGTTCAAATATG+TGG | - | chr5.3:23013787-23013806 | MS.gene53461:CDS | 35.0% | |
| TAAGCAAAACTCTACTGTTG+TGG | + | chr5.3:23017613-23017632 | None:intergenic | 35.0% | |
| TATGTCCATTGTAGTAGGTT+TGG | + | chr5.3:23017250-23017269 | None:intergenic | 35.0% | |
| TATGTCCGAATTCATGGTTA+GGG | - | chr5.3:23013815-23013834 | MS.gene53461:CDS | 35.0% | |
| TCAATTAGCTAACCTCAATC+GGG | + | chr5.3:23017804-23017823 | None:intergenic | 35.0% | |
| TCTTCATTATGTGGGATGAA+AGG | + | chr5.3:23014822-23014841 | None:intergenic | 35.0% | |
| TGAATGTAAGGTTTGAAGGA+CGG | + | chr5.3:23014658-23014677 | None:intergenic | 35.0% | |
| TTATGTCCGAATTCATGGTT+AGG | - | chr5.3:23013814-23013833 | MS.gene53461:CDS | 35.0% | |
| ! | AATTTCCATTGCCATTTGGA+AGG | - | chr5.3:23015674-23015693 | MS.gene53461:intron | 35.0% |
| ! | AGCATAAGCTTTTCAGAATG+TGG | - | chr5.3:23014879-23014898 | MS.gene53461:intron | 35.0% |
| ! | ATAAGCTTTTCAGAATGTGG+AGG | - | chr5.3:23014882-23014901 | MS.gene53461:intron | 35.0% |
| ! | ATTTCCATTGCCATTTGGAA+GGG | - | chr5.3:23015675-23015694 | MS.gene53461:intron | 35.0% |
| ! | CAAAAAAGGGCTCTTGTTAT+AGG | - | chr5.3:23017511-23017530 | MS.gene53461:intron | 35.0% |
| ! | CCAACTCATTTTCTCTCATA+TGG | - | chr5.3:23016272-23016291 | MS.gene53461:CDS | 35.0% |
| ! | TAGGTATTCTGAGAACACTA+TGG | - | chr5.3:23016964-23016983 | MS.gene53461:CDS | 35.0% |
| !! | TGGTTTGTGCTTTAAGGTTA+CGG | - | chr5.3:23014435-23014454 | MS.gene53461:intron | 35.0% |
| !!! | CTATAACAAGAGCCCTTTTT+TGG | + | chr5.3:23017513-23017532 | None:intergenic | 35.0% |
| !!! | GCATTTTTTCTAGACCCTTT+TGG | + | chr5.3:23017756-23017775 | None:intergenic | 35.0% |
| !!! | TCAAGGGTGTTTACGTATTT+TGG | + | chr5.3:23017128-23017147 | None:intergenic | 35.0% |
| AACATTGTCTCTGACAGACT+TGG | - | chr5.3:23014852-23014871 | MS.gene53461:intron | 40.0% | |
| AATTTGGACAATGGTTGCTG+GGG | - | chr5.3:23016604-23016623 | MS.gene53461:intron | 40.0% | |
| ATAACCCTTCCAAATGGCAA+TGG | + | chr5.3:23015682-23015701 | None:intergenic | 40.0% | |
| ATATGGCTCCACTTTCTTCT+AGG | - | chr5.3:23016289-23016308 | MS.gene53461:CDS | 40.0% | |
| ATGAACAGACGTTGTCGTAT+TGG | - | chr5.3:23015631-23015650 | MS.gene53461:intron | 40.0% | |
| ATTCACTGTGTTGAACCCAA+AGG | - | chr5.3:23016577-23016596 | MS.gene53461:intron | 40.0% | |
| CAAGAATGCACCTTTATGTG+AGG | - | chr5.3:23017713-23017732 | MS.gene53461:intron | 40.0% | |
| CAGCAACCATTGTCCAAATT+CGG | + | chr5.3:23016604-23016623 | None:intergenic | 40.0% | |
| CCTCTCATATCCAAAGGATA+AGG | + | chr5.3:23015495-23015514 | None:intergenic | 40.0% | |
| CCTTATCCTTTGGATATGAG+AGG | - | chr5.3:23015492-23015511 | MS.gene53461:intron | 40.0% | |
| CTAGAAAAAATGCGAGCACT+TGG | - | chr5.3:23017763-23017782 | MS.gene53461:intron | 40.0% | |
| CTTACTTGTGCAGACTTGAT+AGG | + | chr5.3:23013645-23013664 | None:intergenic | 40.0% | |
| GAATTTGGACAATGGTTGCT+GGG | - | chr5.3:23016603-23016622 | MS.gene53461:intron | 40.0% | |
| GAGAACCAAACCTACTACAA+TGG | - | chr5.3:23017242-23017261 | MS.gene53461:intron | 40.0% | |
| GGTTGCCTTGAATTTGGATT+TGG | - | chr5.3:23014564-23014583 | MS.gene53461:intron | 40.0% | |
| GTCTGTCAGAGACAATGTTA+AGG | + | chr5.3:23014851-23014870 | None:intergenic | 40.0% | |
| GTTACAGGTTCGCTATATGA+AGG | + | chr5.3:23016221-23016240 | None:intergenic | 40.0% | |
| TAGTGTCATCTACGCTGATA+CGG | - | chr5.3:23016634-23016653 | MS.gene53461:CDS | 40.0% | |
| TATGGCATAAGCACTTGCAA+AGG | + | chr5.3:23014283-23014302 | None:intergenic | 40.0% | |
| TCCATGAATGAAAGACTCAG+TGG | + | chr5.3:23015710-23015729 | None:intergenic | 40.0% | |
| TGAATTTACCTCCAAGGGAA+GGG | + | chr5.3:23015112-23015131 | None:intergenic | 40.0% | |
| TGCAAAACCTCCTCTTCATT+GGG | + | chr5.3:23016813-23016832 | None:intergenic | 40.0% | |
| TTAATACAGGTAGGCGATCT+TGG | - | chr5.3:23016744-23016763 | MS.gene53461:CDS | 40.0% | |
| TTACACCAGATTCCTCTAAG+GGG | + | chr5.3:23015894-23015913 | None:intergenic | 40.0% | |
| TTCACTGTGTTGAACCCAAA+GGG | - | chr5.3:23016578-23016597 | MS.gene53461:intron | 40.0% | |
| TTGAATTTACCTCCAAGGGA+AGG | + | chr5.3:23015113-23015132 | None:intergenic | 40.0% | |
| TTGGGCCAAATCCAAATTCA+AGG | + | chr5.3:23014572-23014591 | None:intergenic | 40.0% | |
| ! | AAAAGGGCTCTTGTTATAGG+TGG | - | chr5.3:23017514-23017533 | MS.gene53461:intron | 40.0% |
| ! | ATACCAGTCATTGTTGCTTC+AGG | + | chr5.3:23017940-23017959 | None:intergenic | 40.0% |
| ! | CTGCCTTTAACTTTGATTCC+TGG | + | chr5.3:23017693-23017712 | None:intergenic | 40.0% |
| ! | CTTTAAGAGACTTTCTGGCA+AGG | - | chr5.3:23013614-23013633 | MS.gene53461:intron | 40.0% |
| ! | GAGCACTTTAAGAGACTTTC+TGG | - | chr5.3:23013609-23013628 | MS.gene53461:CDS | 40.0% |
| ! | GAGTAACAAGAGCCCTTTTT+CGG | + | chr5.3:23017429-23017448 | None:intergenic | 40.0% |
| ! | TATGGTGCTAACGTGAACAA+CGG | - | chr5.3:23016913-23016932 | MS.gene53461:intron | 40.0% |
| ! | TGATGGAAAGCCTTATCCTT+TGG | - | chr5.3:23015482-23015501 | MS.gene53461:intron | 40.0% |
| !! | TCATTTGTGAAAGAGCGTCT+TGG | - | chr5.3:23014598-23014617 | MS.gene53461:intron | 40.0% |
| !! | TCTAGACCCTTTTGGTAGTT+CGG | + | chr5.3:23017748-23017767 | None:intergenic | 40.0% |
| !! | TGGTTTGGTTGCCTTGAATT+TGG | - | chr5.3:23014558-23014577 | MS.gene53461:intron | 40.0% |
| AAAAATGCGAGCACTTGGAG+AGG | - | chr5.3:23017768-23017787 | MS.gene53461:intron | 45.0% | |
| AAAGGGCCGAATTTGGACAA+TGG | - | chr5.3:23016595-23016614 | MS.gene53461:intron | 45.0% | |
| AAGGCTTATCCCACTAAGTG+GGG | + | chr5.3:23017013-23017032 | None:intergenic | 45.0% | |
| AATTCGGGCACTAAAGGAGA+AGG | - | chr5.3:23017582-23017601 | MS.gene53461:intron | 45.0% | |
| AGCTGCAAGACAAGGAACAA+TGG | - | chr5.3:23014476-23014495 | MS.gene53461:intron | 45.0% | |
| ATGCACGCTACAGTGAATCA+AGG | + | chr5.3:23014389-23014408 | None:intergenic | 45.0% | |
| ATTGTCCAAATTCGGCCCTT+TGG | + | chr5.3:23016596-23016615 | None:intergenic | 45.0% | |
| ATTTGGACAATGGTTGCTGG+GGG | - | chr5.3:23016605-23016624 | MS.gene53461:intron | 45.0% | |
| CAAGGCTTATCCCACTAAGT+GGG | + | chr5.3:23017014-23017033 | None:intergenic | 45.0% | |
| CGAATTTGGACAATGGTTGC+TGG | - | chr5.3:23016602-23016621 | MS.gene53461:intron | 45.0% | |
| CGCTTCCCAAATAACATGTC+AGG | + | chr5.3:23014529-23014548 | None:intergenic | 45.0% | |
| CTGCAAAACCTCCTCTTCAT+TGG | + | chr5.3:23016814-23016833 | None:intergenic | 45.0% | |
| GAAGCGTGGTAAAAGTGGTT+TGG | - | chr5.3:23014543-23014562 | MS.gene53461:intron | 45.0% | |
| GCACTCATAACCCTTCCAAA+TGG | + | chr5.3:23015688-23015707 | None:intergenic | 45.0% | |
| GCCACTGAGTCTTTCATTCA+TGG | - | chr5.3:23015706-23015725 | MS.gene53461:intron | 45.0% | |
| GTTAGGAGAGAATGTCTCTC+TGG | + | chr5.3:23016151-23016170 | None:intergenic | 45.0% | |
| GTTGAAATGGGTGGATGCAA+GGG | - | chr5.3:23014771-23014790 | MS.gene53461:CDS | 45.0% | |
| TAACCCTGATGGCCGAAAAA+GGG | - | chr5.3:23017414-23017433 | MS.gene53461:intron | 45.0% | |
| TGGCATAATTCGGGCACTAA+AGG | - | chr5.3:23017576-23017595 | MS.gene53461:intron | 45.0% | |
| TGTAAGGTTTGAAGGACGGA+CGG | + | chr5.3:23014654-23014673 | None:intergenic | 45.0% | |
| TTGCAGCTCAGTGAAATCAG+TGG | + | chr5.3:23014464-23014483 | None:intergenic | 45.0% | |
| TTGTCCAAATTCGGCCCTTT+GGG | + | chr5.3:23016595-23016614 | None:intergenic | 45.0% | |
| TTTCACTGAGCTGCAAGACA+AGG | - | chr5.3:23014468-23014487 | MS.gene53461:intron | 45.0% | |
| ! | ATGGTGCTAACGTGAACAAC+GGG | - | chr5.3:23016914-23016933 | MS.gene53461:intron | 45.0% |
| ! | CTGTTTTGCCACCATTGTAG+AGG | + | chr5.3:23016085-23016104 | None:intergenic | 45.0% |
| ! | GACATGTTATTTGGGAAGCG+TGG | - | chr5.3:23014529-23014548 | MS.gene53461:intron | 45.0% |
| ! | TTTGGGAAGCGTGGTAAAAG+TGG | - | chr5.3:23014538-23014557 | MS.gene53461:intron | 45.0% |
| !! | CTTGGCTTTGCAAATGAGCT+TGG | - | chr5.3:23016762-23016781 | MS.gene53461:CDS | 45.0% |
| !! | GAAAGAGCGTCTTGGTAAAG+AGG | - | chr5.3:23014606-23014625 | MS.gene53461:intron | 45.0% |
| !! | TTGTCGTATTGGTTGCAGGT+GGG | - | chr5.3:23015642-23015661 | MS.gene53461:intron | 45.0% |
| !!! | AAGAGCCCTTTTTTGGCCAT+CGG | + | chr5.3:23017506-23017525 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTGTAATTT+TGG | - | chr5.3:23017281-23017300 | MS.gene53461:intron | 5.0% |
| AAGGGAAGGGTTGCAACAAG+TGG | + | chr5.3:23015099-23015118 | None:intergenic | 50.0% | |
| ACACCCGCTTCACGCATTTA+GGG | + | chr5.3:23017080-23017099 | None:intergenic | 50.0% | |
| AGCTCGCCTCTCATATCCAA+AGG | + | chr5.3:23015501-23015520 | None:intergenic | 50.0% | |
| AGGGAAGGGTTGCAACAAGT+GGG | + | chr5.3:23015098-23015117 | None:intergenic | 50.0% | |
| ATGCACCTTTATGTGAGGCG+AGG | - | chr5.3:23017718-23017737 | MS.gene53461:intron | 50.0% | |
| CCAAGGCTTATCCCACTAAG+TGG | + | chr5.3:23017015-23017034 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGCCT+TGG | - | chr5.3:23017012-23017031 | MS.gene53461:CDS | 50.0% | |
| CGAGCACTTGGAGAGGAAAT+TGG | - | chr5.3:23017775-23017794 | MS.gene53461:intron | 50.0% | |
| CGAGCGTACAACCTCTACAA+TGG | - | chr5.3:23016071-23016090 | MS.gene53461:CDS | 50.0% | |
| CTAACCCTGATGGCCGAAAA+AGG | - | chr5.3:23017413-23017432 | MS.gene53461:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5.3:23017009-23017028 | None:intergenic | 50.0% | |
| GATGTAAGAGACACTCCCGT+TGG | + | chr5.3:23015063-23015082 | None:intergenic | 50.0% | |
| GATTGCACAAGTACAGCCAG+TGG | + | chr5.3:23015333-23015352 | None:intergenic | 50.0% | |
| GCGTACAACCTCTACAATGG+TGG | - | chr5.3:23016074-23016093 | MS.gene53461:CDS | 50.0% | |
| GGAAATTGGCATCCCGATTG+AGG | - | chr5.3:23017789-23017808 | MS.gene53461:intron | 50.0% | |
| GGACCTGAAGCAACAATGAC+TGG | - | chr5.3:23017934-23017953 | MS.gene53461:CDS | 50.0% | |
| GGAGAGAATGTCTCTCTGGT+AGG | + | chr5.3:23016147-23016166 | None:intergenic | 50.0% | |
| GGTTGAAATGGGTGGATGCA+AGG | - | chr5.3:23014770-23014789 | MS.gene53461:CDS | 50.0% | |
| GTCATCTACGCTGATACGGT+GGG | - | chr5.3:23016638-23016657 | MS.gene53461:CDS | 50.0% | |
| GTTCGCTATATGAAGGAGCG+AGG | + | chr5.3:23016214-23016233 | None:intergenic | 50.0% | |
| TAGTGGTGCACCCAATGAAG+AGG | - | chr5.3:23016800-23016819 | MS.gene53461:intron | 50.0% | |
| TGAACCCAAAGGGCCGAATT+TGG | - | chr5.3:23016588-23016607 | MS.gene53461:intron | 50.0% | |
| TGCACCTTTATGTGAGGCGA+GGG | - | chr5.3:23017719-23017738 | MS.gene53461:intron | 50.0% | |
| TGGTCCCTAAATGCGTGAAG+CGG | - | chr5.3:23017073-23017092 | MS.gene53461:CDS | 50.0% | |
| TGTCATCTACGCTGATACGG+TGG | - | chr5.3:23016637-23016656 | MS.gene53461:CDS | 50.0% | |
| TGTCTGACACCGACACATGT+CGG | + | chr5.3:23016373-23016392 | None:intergenic | 50.0% | |
| TGTGCAACTGCTAACCCTGA+TGG | - | chr5.3:23017403-23017422 | MS.gene53461:intron | 50.0% | |
| ! | ACAGGCGCACACACATTTTC+TGG | + | chr5.3:23015809-23015828 | None:intergenic | 50.0% |
| ! | ACCAGATTCCTCTAAGGGGT+AGG | + | chr5.3:23015890-23015909 | None:intergenic | 50.0% |
| ! | ACTTGTTGCAACCCTTCCCT+TGG | - | chr5.3:23015098-23015117 | MS.gene53461:intron | 50.0% |
| ! | AGATTCCTCTAAGGGGTAGG+GGG | + | chr5.3:23015887-23015906 | None:intergenic | 50.0% |
| ! | AGGGCTCTTGTTATAGGTGG+AGG | - | chr5.3:23017517-23017536 | MS.gene53461:intron | 50.0% |
| ! | CAGATTCCTCTAAGGGGTAG+GGG | + | chr5.3:23015888-23015907 | None:intergenic | 50.0% |
| ! | CCAGATTCCTCTAAGGGGTA+GGG | + | chr5.3:23015889-23015908 | None:intergenic | 50.0% |
| ! | TCAGGGTTAGCAGTTGCACA+TGG | + | chr5.3:23017403-23017422 | None:intergenic | 50.0% |
| ! | TCTGGTAGGAGCTTAGCTCT+GGG | + | chr5.3:23016133-23016152 | None:intergenic | 50.0% |
| !! | ACATGTGTCGGTGTCAGACA+CGG | - | chr5.3:23016373-23016392 | MS.gene53461:intron | 50.0% |
| !! | GACGTTGTCGTATTGGTTGC+AGG | - | chr5.3:23015638-23015657 | MS.gene53461:intron | 50.0% |
| !! | GTTGTCGTATTGGTTGCAGG+TGG | - | chr5.3:23015641-23015660 | MS.gene53461:intron | 50.0% |
| !! | TGTCGTATTGGTTGCAGGTG+GGG | - | chr5.3:23015643-23015662 | MS.gene53461:intron | 50.0% |
| !!! | AGAGCCCTTTTTTGGCCATC+GGG | + | chr5.3:23017505-23017524 | None:intergenic | 50.0% |
| !!! | AGGTGTGCTTTTTCCCACTC+TGG | - | chr5.3:23014626-23014645 | MS.gene53461:intron | 50.0% |
| ACCGACACATGTCGGACACT+AGG | + | chr5.3:23016365-23016384 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5.3:23017001-23017020 | None:intergenic | 55.0% | |
| AGGGGGTCCGAACTACCAAA+AGG | - | chr5.3:23017738-23017757 | MS.gene53461:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5.3:23017000-23017019 | MS.gene53461:CDS | 55.0% | |
| CACCTTTATGTGAGGCGAGG+GGG | - | chr5.3:23017721-23017740 | MS.gene53461:intron | 55.0% | |
| CCCTACCCCTTAGAGGAATC+TGG | - | chr5.3:23015886-23015905 | MS.gene53461:intron | 55.0% | |
| CGACCCCGATGGCCAAAAAA+GGG | - | chr5.3:23017498-23017517 | MS.gene53461:intron | 55.0% | |
| CTCTGGTAGGAGCTTAGCTC+TGG | + | chr5.3:23016134-23016153 | None:intergenic | 55.0% | |
| GAATACCCCCTACCCCTTAG+AGG | - | chr5.3:23015879-23015898 | MS.gene53461:CDS | 55.0% | |
| GACACCCGCTTCACGCATTT+AGG | + | chr5.3:23017081-23017100 | None:intergenic | 55.0% | |
| GCACCTTTATGTGAGGCGAG+GGG | - | chr5.3:23017720-23017739 | MS.gene53461:intron | 55.0% | |
| GCCTAGTGTCCGACATGTGT+CGG | - | chr5.3:23016361-23016380 | MS.gene53461:intron | 55.0% | |
| GGGAAGGGTTGCAACAAGTG+GGG | + | chr5.3:23015097-23015116 | None:intergenic | 55.0% | |
| GGGGGTCCGAACTACCAAAA+GGG | - | chr5.3:23017739-23017758 | MS.gene53461:intron | 55.0% | |
| GGTCCCTAAATGCGTGAAGC+GGG | - | chr5.3:23017074-23017093 | MS.gene53461:CDS | 55.0% | |
| TGGTGCACCCAATGAAGAGG+AGG | - | chr5.3:23016803-23016822 | MS.gene53461:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5.3:23017001-23017020 | MS.gene53461:CDS | 55.0% | |
| TGTTGCAACCCTTCCCTTGG+AGG | - | chr5.3:23015101-23015120 | MS.gene53461:intron | 55.0% | |
| !! | TAGGAGCTTAGCTCTGGGCA+GGG | + | chr5.3:23016128-23016147 | None:intergenic | 55.0% |
| !!! | AGAGCCCTTTTTCGGCCATC+AGG | + | chr5.3:23017421-23017440 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGCCATCGGGGT+CGG | + | chr5.3:23017500-23017519 | None:intergenic | 55.0% |
| !!! | GAGCCCTTTTTCGGCCATCA+GGG | + | chr5.3:23017420-23017439 | None:intergenic | 55.0% |
| !!! | GAGCCCTTTTTTGGCCATCG+GGG | + | chr5.3:23017504-23017523 | None:intergenic | 55.0% |
| CCGACCCCGATGGCCAAAAA+AGG | - | chr5.3:23017497-23017516 | MS.gene53461:intron | 60.0% | |
| GACCCCCTCGCCTCACATAA+AGG | + | chr5.3:23017726-23017745 | None:intergenic | 60.0% | |
| TGGACAATGGTTGCTGGGGG+AGG | - | chr5.3:23016608-23016627 | MS.gene53461:intron | 60.0% | |
| !! | AGGAGCTTAGCTCTGGGCAG+GGG | + | chr5.3:23016127-23016146 | None:intergenic | 60.0% |
| !! | GTAGGAGCTTAGCTCTGGGC+AGG | + | chr5.3:23016129-23016148 | None:intergenic | 60.0% |
| AAGGACGGACGGAGCCAGAG+TGG | + | chr5.3:23014643-23014662 | None:intergenic | 65.0% | |
| AGGACGGACGGAGCCAGAGT+GGG | + | chr5.3:23014642-23014661 | None:intergenic | 65.0% | |
| TGTGCAACTGCCGACCCCGA+TGG | - | chr5.3:23017487-23017506 | MS.gene53461:intron | 65.0% | |
| CGGGGTCGGCAGTTGCACAC+TGG | + | chr5.3:23017486-23017505 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 23013561 | 23017999 | 23013561 | ID=MS.gene53461 |
| chr5.3 | mRNA | 23013561 | 23017999 | 23013561 | ID=MS.gene53461.t1;Parent=MS.gene53461 |
| chr5.3 | exon | 23017901 | 23017999 | 23017901 | ID=MS.gene53461.t1.exon1;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23017901 | 23017999 | 23017901 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23016933 | 23017109 | 23016933 | ID=MS.gene53461.t1.exon2;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23016933 | 23017109 | 23016933 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23016628 | 23016789 | 23016628 | ID=MS.gene53461.t1.exon3;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23016628 | 23016789 | 23016628 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23016438 | 23016518 | 23016438 | ID=MS.gene53461.t1.exon4;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23016438 | 23016518 | 23016438 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23016263 | 23016314 | 23016263 | ID=MS.gene53461.t1.exon5;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23016263 | 23016314 | 23016263 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23016007 | 23016121 | 23016007 | ID=MS.gene53461.t1.exon6;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23016007 | 23016121 | 23016007 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23015819 | 23015900 | 23015819 | ID=MS.gene53461.t1.exon7;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23015819 | 23015900 | 23015819 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23014905 | 23015000 | 23014905 | ID=MS.gene53461.t1.exon8;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23014905 | 23015000 | 23014905 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23014706 | 23014807 | 23014706 | ID=MS.gene53461.t1.exon9;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23014706 | 23014807 | 23014706 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23013957 | 23014073 | 23013957 | ID=MS.gene53461.t1.exon10;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23013957 | 23014073 | 23013957 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23013750 | 23013866 | 23013750 | ID=MS.gene53461.t1.exon11;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23013750 | 23013866 | 23013750 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| chr5.3 | exon | 23013561 | 23013632 | 23013561 | ID=MS.gene53461.t1.exon12;Parent=MS.gene53461.t1 |
| chr5.3 | CDS | 23013561 | 23013632 | 23013561 | ID=cds.MS.gene53461.t1;Parent=MS.gene53461.t1 |
| Gene Sequence |
| Protein sequence |
