Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027843.t1 | XP_003612954.1 | 99.8 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 2.70E-295 | 1023.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027843.t1 | P34899 | 95.6 | 518 | 23 | 0 | 1 | 518 | 1 | 518 | 1.2e-288 | 993.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027843.t1 | A9YWS0 | 99.8 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 1.9e-295 | 1023.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027843 | MS.gene072040 | PPI |
| MS.gene027843 | MS.gene002066 | PPI |
| MS.gene047182 | MS.gene027843 | PPI |
| MS.gene00638 | MS.gene027843 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027843.t1 | MTR_5g030950 | 99.807 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 0.0 | 1073 |
| MS.gene027843.t1 | MTR_5g067060 | 83.915 | 516 | 74 | 1 | 3 | 518 | 1 | 507 | 0.0 | 897 |
| MS.gene027843.t1 | MTR_2g018290 | 59.825 | 458 | 175 | 2 | 52 | 508 | 83 | 532 | 0.0 | 573 |
| MS.gene027843.t1 | MTR_8g081510 | 58.369 | 466 | 187 | 4 | 53 | 516 | 9 | 469 | 0.0 | 557 |
| MS.gene027843.t1 | MTR_3g084310 | 58.584 | 466 | 186 | 4 | 53 | 516 | 9 | 469 | 0.0 | 555 |
| MS.gene027843.t1 | MTR_2g006570 | 54.140 | 471 | 201 | 6 | 47 | 510 | 130 | 592 | 2.51e-173 | 501 |
| MS.gene027843.t1 | MTR_3g073470 | 53.291 | 471 | 202 | 6 | 46 | 509 | 116 | 575 | 1.17e-170 | 494 |
| MS.gene027843.t1 | MTR_3g084310 | 63.068 | 352 | 128 | 2 | 53 | 402 | 9 | 360 | 2.20e-161 | 462 |
| MS.gene027843.t1 | MTR_2g006570 | 53.991 | 426 | 184 | 5 | 92 | 510 | 1 | 421 | 1.92e-157 | 455 |
| MS.gene027843.t1 | MTR_7g108420 | 52.194 | 433 | 175 | 6 | 83 | 509 | 3 | 409 | 4.92e-149 | 433 |
| MS.gene027843.t1 | MTR_1g073580 | 40.972 | 144 | 84 | 1 | 359 | 501 | 83 | 226 | 2.38e-27 | 110 |
| MS.gene027843.t1 | MTR_1g073580 | 52.273 | 88 | 37 | 2 | 200 | 287 | 1 | 83 | 8.45e-19 | 86.3 |
| MS.gene027843.t1 | MTR_3g062030 | 53.061 | 98 | 34 | 2 | 296 | 393 | 1 | 86 | 1.67e-22 | 96.7 |
| MS.gene027843.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 378 | 452 | 1 | 79 | 2.69e-21 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027843.t1 | AT4G37930 | 88.953 | 516 | 56 | 1 | 1 | 516 | 1 | 515 | 0.0 | 968 |
| MS.gene027843.t1 | AT5G26780 | 85.106 | 517 | 76 | 1 | 3 | 518 | 1 | 517 | 0.0 | 923 |
| MS.gene027843.t1 | AT5G26780 | 85.106 | 517 | 76 | 1 | 3 | 518 | 1 | 517 | 0.0 | 923 |
| MS.gene027843.t1 | AT5G26780 | 82.739 | 533 | 75 | 2 | 3 | 518 | 1 | 533 | 0.0 | 914 |
| MS.gene027843.t1 | AT5G26780 | 82.739 | 533 | 75 | 2 | 3 | 518 | 1 | 533 | 0.0 | 914 |
| MS.gene027843.t1 | AT4G32520 | 58.753 | 497 | 187 | 6 | 22 | 508 | 40 | 528 | 0.0 | 602 |
| MS.gene027843.t1 | AT4G32520 | 58.753 | 497 | 187 | 6 | 22 | 508 | 40 | 528 | 0.0 | 602 |
| MS.gene027843.t1 | AT4G13930 | 58.155 | 466 | 188 | 4 | 53 | 516 | 9 | 469 | 0.0 | 553 |
| MS.gene027843.t1 | AT4G13890 | 56.209 | 459 | 194 | 4 | 53 | 509 | 9 | 462 | 0.0 | 527 |
| MS.gene027843.t1 | AT4G13890 | 59.008 | 383 | 155 | 2 | 53 | 433 | 9 | 391 | 2.54e-165 | 474 |
| MS.gene027843.t1 | AT1G36370 | 49.797 | 492 | 230 | 6 | 21 | 504 | 106 | 588 | 3.92e-165 | 481 |
| MS.gene027843.t1 | AT1G22020 | 49.393 | 494 | 235 | 6 | 24 | 510 | 113 | 598 | 1.27e-163 | 477 |
| MS.gene027843.t1 | AT1G22020 | 49.393 | 494 | 235 | 6 | 24 | 510 | 113 | 598 | 1.27e-163 | 477 |
Find 108 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGTTATGAGCTTGTTTC+TGG | 0.242132 | 5.2:-21025289 | MS.gene027843:CDS |
| TTCGGTTAGATCCAGCTAAA+TGG | 0.242138 | 5.2:-21027336 | MS.gene027843:CDS |
| ATAATTAGGAACAAAATTAA+AGG | 0.266678 | 5.2:-21024530 | MS.gene027843:intron |
| TTTGGTGAATCTCAAGAATA+AGG | 0.268021 | 5.2:-21025245 | MS.gene027843:intron |
| CTATGGTTCCTGGTGGTATC+AGG | 0.288605 | 5.2:-21024874 | MS.gene027843:CDS |
| CCTCACAACCATACCATTAC+TGG | 0.309322 | 5.2:-21025813 | MS.gene027843:CDS |
| AGCTGTGATGTTAGCAGATA+TGG | 0.329731 | 5.2:-21026221 | MS.gene027843:CDS |
| TCAATAATATCAGCAATTTC+AGG | 0.336823 | 5.2:+21028227 | None:intergenic |
| GATGTGTCTGCTATGGTTCC+TGG | 0.354698 | 5.2:-21024884 | MS.gene027843:CDS |
| CAAAGAGAATTCACGTGTTT+CGG | 0.355000 | 5.2:-21028585 | MS.gene027843:intron |
| GTGCTTTCATCCAATCTATA+TGG | 0.358204 | 5.2:+21026623 | None:intergenic |
| ATGCTTCCAAGGCACGCTTT+TGG | 0.362934 | 5.2:+21027359 | None:intergenic |
| TTCTTACCTCCCCATTTAGC+TGG | 0.365927 | 5.2:+21027325 | None:intergenic |
| TGAGACAATGCCATATAGAT+TGG | 0.372179 | 5.2:-21026633 | MS.gene027843:CDS |
| GACTGAGAATCATCTAGTTT+TGG | 0.372451 | 5.2:-21025263 | MS.gene027843:CDS |
| AGAAATCTGCTACCCTCTTC+AGG | 0.373752 | 5.2:-21026461 | MS.gene027843:CDS |
| TCGGTTAGATCCAGCTAAAT+GGG | 0.380732 | 5.2:-21027335 | MS.gene027843:CDS |
| AGTGGAGAATTCAATTGCTT+TGG | 0.389470 | 5.2:+21028263 | None:intergenic |
| AGGCCAAAACTAATTGTTGC+TGG | 0.397586 | 5.2:-21026441 | MS.gene027843:CDS |
| GCACCAGCAACAATTAGTTT+TGG | 0.398596 | 5.2:+21026438 | None:intergenic |
| AAATACAGTGAAGGTTATCC+TGG | 0.420592 | 5.2:-21027573 | MS.gene027843:CDS |
| CTCAACATCATGACGAAGCT+TGG | 0.426845 | 5.2:+21024459 | None:intergenic |
| ATCAATCAAGCTGTCTTCCC+TGG | 0.430141 | 5.2:-21025849 | MS.gene027843:CDS |
| TGAGGACCACCTTGCAGTCC+AGG | 0.439744 | 5.2:+21025831 | None:intergenic |
| AGCGTGCCTTGGAAGCATTT+CGG | 0.449007 | 5.2:-21027354 | MS.gene027843:CDS |
| GAACTCCTGCTCTTACTTCA+AGG | 0.449715 | 5.2:-21024759 | MS.gene027843:CDS |
| TTGTCATAGACAGCTTCATC+AGG | 0.455623 | 5.2:+21028605 | None:intergenic |
| CTATCTGTTATGCAAGCTGT+TGG | 0.456660 | 5.2:-21027612 | MS.gene027843:CDS |
| TATCCTGGAGCAAGATATTA+CGG | 0.473262 | 5.2:-21027558 | MS.gene027843:CDS |
| CGTCGAGGAGGATTTCGTTA+AGG | 0.474022 | 5.2:-21024731 | MS.gene027843:CDS |
| GTGAACGTGCAGCCTTTGTC+TGG | 0.476132 | 5.2:-21027033 | MS.gene027843:CDS |
| CCTCCGTAATATCTTGCTCC+AGG | 0.483511 | 5.2:+21027555 | None:intergenic |
| GCAAAACAATTCCCAACCAT+TGG | 0.494544 | 5.2:-21024430 | MS.gene027843:CDS |
| TTTAGCTGTTGCGTTGAAGC+AGG | 0.495619 | 5.2:-21025790 | MS.gene027843:intron |
| TGCTTCTTCTGTTTACTACA+AGG | 0.498202 | 5.2:-21029517 | MS.gene027843:intron |
| ACAACTCACAAGTCACTTCG+TGG | 0.500888 | 5.2:-21026127 | MS.gene027843:CDS |
| TCTTGGTATGCTTTATACTC+TGG | 0.501564 | 5.2:+21025468 | None:intergenic |
| GAATTTGGCTTTGAAGATCA+AGG | 0.509614 | 5.2:-21024683 | MS.gene027843:CDS |
| GCTGTCTTCCCTGGACTGCA+AGG | 0.511974 | 5.2:-21025840 | MS.gene027843:CDS |
| GGTTCCTGGTGGTATCAGGA+TGG | 0.513253 | 5.2:-21024870 | MS.gene027843:CDS |
| CGCAACAGCTAAACCAGTAA+TGG | 0.514440 | 5.2:+21025800 | None:intergenic |
| CAAGCTTCGTCATGATGTTG+AGG | 0.517604 | 5.2:-21024458 | MS.gene027843:CDS |
| ACTACATCTGCATAATCAAA+AGG | 0.519854 | 5.2:+21026157 | None:intergenic |
| GCAATTGAATTCTCCACTTG+AGG | 0.521875 | 5.2:-21028258 | MS.gene027843:CDS |
| TCAGGATCAATTTCCTCAAG+TGG | 0.525701 | 5.2:+21028245 | None:intergenic |
| TCCTGGAGATGTGTCTGCTA+TGG | 0.527373 | 5.2:-21024891 | MS.gene027843:CDS |
| ACATCTTTCTCATGGTTACC+AGG | 0.529057 | 5.2:-21026929 | MS.gene027843:intron |
| GGTTATGAGCTTGTTTCTGG+TGG | 0.529989 | 5.2:-21025286 | MS.gene027843:CDS |
| ACTATGCCAAAAGCGTGCCT+TGG | 0.531463 | 5.2:-21027365 | MS.gene027843:CDS |
| GAAGGTGTTCTATGACTATG+AGG | 0.531695 | 5.2:-21025877 | MS.gene027843:intron |
| ACCATAGCAGACACATCTCC+AGG | 0.532051 | 5.2:+21024890 | None:intergenic |
| TTGCAGGCTCTGAGTGAGAA+AGG | 0.532506 | 5.2:-21025307 | MS.gene027843:intron |
| GTATAAAGCATACCAAGAGC+AGG | 0.537001 | 5.2:-21025463 | MS.gene027843:CDS |
| CATGGAGGACATCTTTCTCA+TGG | 0.540963 | 5.2:-21026937 | MS.gene027843:CDS |
| ATGGCACTTGATCTCCCTCA+TGG | 0.541789 | 5.2:-21026955 | MS.gene027843:CDS |
| GAAACCTCATGATAGAATCA+TGG | 0.544843 | 5.2:-21026974 | MS.gene027843:CDS |
| GTTCCTGGTGGTATCAGGAT+GGG | 0.544981 | 5.2:-21024869 | MS.gene027843:intron |
| CAGCTAAACCAGTAATGGTA+TGG | 0.548948 | 5.2:+21025805 | None:intergenic |
| AATTGCTGAGAACCTGCTCT+TGG | 0.549215 | 5.2:+21025451 | None:intergenic |
| ATCAGTGGACTGGTTGCAGC+TGG | 0.551421 | 5.2:-21026193 | MS.gene027843:CDS |
| AGTCAACAAACAAGGAAAAG+AGG | 0.553974 | 5.2:-21026062 | MS.gene027843:intron |
| AACTCCTGCTCTTACTTCAA+GGG | 0.559611 | 5.2:-21024758 | MS.gene027843:CDS |
| CAATTGCGCAAAATTTGCAC+AGG | 0.560674 | 5.2:-21025433 | MS.gene027843:intron |
| GTGTAAACATGAAAATTTGA+AGG | 0.561653 | 5.2:+21027006 | None:intergenic |
| TTCCAACACCTTCTCAACTC+TGG | 0.563616 | 5.2:+21024946 | None:intergenic |
| AAGATCAAGGCAGAGAGCAA+AGG | 0.565204 | 5.2:-21024670 | MS.gene027843:intron |
| GTTATGAGCTTGTTTCTGGT+GGG | 0.566698 | 5.2:-21025285 | MS.gene027843:CDS |
| TGAGAAAGCTAGACAATGGA+AGG | 0.567432 | 5.2:-21028201 | MS.gene027843:intron |
| TATAGATTGGATGAAAGCAC+AGG | 0.570064 | 5.2:-21026620 | MS.gene027843:CDS |
| GACTGAGATGGCAATGGCAA+TGG | 0.570093 | 5.2:-21029592 | None:intergenic |
| TCTGCATAATCAAAAGGTGA+AGG | 0.572432 | 5.2:+21026163 | None:intergenic |
| CTCTGAGACTGAGATGGCAA+TGG | 0.579939 | 5.2:-21029598 | None:intergenic |
| AATCTCTGACTGCACGTAGG+AGG | 0.581158 | 5.2:+21024483 | None:intergenic |
| CTCCAGAGTTGAGAAGGTGT+TGG | 0.584928 | 5.2:-21024948 | MS.gene027843:CDS |
| CAATGGCAATGGCTCTTCGT+AGG | 0.584959 | 5.2:-21029581 | MS.gene027843:CDS |
| TGATGGCTCCAGAGTTGAGA+AGG | 0.585979 | 5.2:-21024954 | MS.gene027843:CDS |
| AATCCCCTTGAAGTAAGAGC+AGG | 0.586622 | 5.2:+21024754 | None:intergenic |
| ACTCCTGCTCTTACTTCAAG+GGG | 0.596470 | 5.2:-21024757 | MS.gene027843:CDS |
| CTGCATAATCAAAAGGTGAA+GGG | 0.596849 | 5.2:+21026164 | None:intergenic |
| CCAGTAATGGTATGGTTGTG+AGG | 0.597553 | 5.2:+21025813 | None:intergenic |
| TATGGCACATATCAGTGGAC+TGG | 0.602613 | 5.2:-21026203 | MS.gene027843:CDS |
| ATCTAACCGAAATGCTTCCA+AGG | 0.608974 | 5.2:+21027348 | None:intergenic |
| TGATTATGCACGCATTCGCA+AGG | 0.614686 | 5.2:-21026394 | MS.gene027843:intron |
| GCAGATATGGCACATATCAG+TGG | 0.614862 | 5.2:-21026208 | MS.gene027843:CDS |
| GAGAAAGATGTCCTCCATGA+GGG | 0.617557 | 5.2:+21026941 | None:intergenic |
| TACTTCAAGGGGATTCGTCG+AGG | 0.620380 | 5.2:-21024746 | MS.gene027843:CDS |
| AGCTTGAGAAAGCTAGACAA+TGG | 0.621507 | 5.2:-21028205 | MS.gene027843:CDS |
| ATAATCATACAGACGTGCAT+AGG | 0.625798 | 5.2:+21026410 | None:intergenic |
| GTCTTCCCTGGACTGCAAGG+TGG | 0.628225 | 5.2:-21025837 | MS.gene027843:CDS |
| TTCAAGGGGATTCGTCGAGG+AGG | 0.629218 | 5.2:-21024743 | MS.gene027843:CDS |
| ATGACAAACAAATACAGTGA+AGG | 0.630108 | 5.2:-21027582 | MS.gene027843:CDS |
| ACAGAAGAAGCACTGAAGAG+AGG | 0.631325 | 5.2:+21029528 | None:intergenic |
| CGGTTAGATCCAGCTAAATG+GGG | 0.632803 | 5.2:-21027334 | MS.gene027843:CDS |
| TTTGAAGGTGAACCAGACAA+AGG | 0.639590 | 5.2:+21027021 | None:intergenic |
| ACGAAGTGACTTGTGAGTTG+TGG | 0.643535 | 5.2:+21026129 | None:intergenic |
| GAGGACCACCTTGCAGTCCA+GGG | 0.648946 | 5.2:+21025832 | None:intergenic |
| AGTGCCATGATTCTATCATG+AGG | 0.654392 | 5.2:+21026970 | None:intergenic |
| ATACCCATCCTGATACCACC+AGG | 0.659126 | 5.2:+21024866 | None:intergenic |
| TTAAAAGAAGTCAACAAACA+AGG | 0.661947 | 5.2:-21026070 | MS.gene027843:CDS |
| AAGTCACTTCGTGGACCACG+TGG | 0.667056 | 5.2:-21026118 | MS.gene027843:CDS |
| TGAGAAAGATGTCCTCCATG+AGG | 0.670745 | 5.2:+21026940 | None:intergenic |
| AGGATACATTGATTATGACC+AGG | 0.672531 | 5.2:-21026600 | MS.gene027843:intron |
| TTAGATCCAGCTAAATGGGG+AGG | 0.684758 | 5.2:-21027331 | MS.gene027843:intron |
| TCATTACAGATATATTGACA+TGG | 0.693044 | 5.2:-21027395 | MS.gene027843:intron |
| GCACTTGATCTCCCTCATGG+AGG | 0.702241 | 5.2:-21026952 | MS.gene027843:CDS |
| GGAAATCTCTGACTGCACGT+AGG | 0.709632 | 5.2:+21024480 | None:intergenic |
| GTGTCTGCTATGGTTCCTGG+TGG | 0.714961 | 5.2:-21024881 | MS.gene027843:CDS |
| CCTGGAGCAAGATATTACGG+AGG | 0.734873 | 5.2:-21027555 | MS.gene027843:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATTTAGAAAATCA+CGG | + | chr5.2:21027633-21027652 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTTCTCAAATAA+GGG | + | chr5.2:21025043-21025062 | None:intergenic | 10.0% |
| !! | AAAAAGAGATATGTTATTAA+TGG | + | chr5.2:21025338-21025357 | None:intergenic | 15.0% |
| !! | AATAAATCGAAAAATAATGA+TGG | - | chr5.2:21028216-21028235 | MS.gene027843:CDS | 15.0% |
| !! | ACATTTAATCATATTAGTAT+TGG | + | chr5.2:21025171-21025190 | None:intergenic | 15.0% |
| !! | ATAATTAGGAACAAAATTAA+AGG | - | chr5.2:21029451-21029470 | MS.gene027843:intron | 15.0% |
| !! | ATACTAATATGATTAAATGT+AGG | - | chr5.2:21025171-21025190 | MS.gene027843:intron | 15.0% |
| !! | ATATATATATATATAGAGAC+AGG | - | chr5.2:21024611-21024630 | MS.gene027843:intron | 15.0% |
| !! | ATTAAGATTATAAAAACGAA+TGG | - | chr5.2:21025196-21025215 | MS.gene027843:intron | 15.0% |
| !! | TATATATATATATATGAGAC+AGG | + | chr5.2:21025269-21025288 | None:intergenic | 15.0% |
| !! | TCTTAATATTTACAATCAAT+AGG | + | chr5.2:21024922-21024941 | None:intergenic | 15.0% |
| !! | TTAATGATTATTTACATGTT+TGG | - | chr5.2:21025455-21025474 | MS.gene027843:CDS | 15.0% |
| !!! | ATAAAAAATGAATTTTGTTC+AGG | + | chr5.2:21027959-21027978 | None:intergenic | 15.0% |
| !!! | ATTCGTTTTTATAATCTTAA+TGG | + | chr5.2:21025197-21025216 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGCTTAAGAAAA+GGG | - | chr5.2:21028345-21028364 | MS.gene027843:intron | 15.0% |
| !!! | GATTTTTTAATATGTTAGAA+TGG | - | chr5.2:21026892-21026911 | MS.gene027843:intron | 15.0% |
| !!! | GTTTTTTTATTTCTCAAATA+AGG | + | chr5.2:21025044-21025063 | None:intergenic | 15.0% |
| !!! | TTTCAAAAAAACTTTTTTCA+GGG | - | chr5.2:21029001-21029020 | MS.gene027843:intron | 15.0% |
| !!! | TTTTCAAAAAAACTTTTTTC+AGG | - | chr5.2:21029000-21029019 | MS.gene027843:intron | 15.0% |
| !! | AAAAACAACAGATTATAAGA+AGG | + | chr5.2:21027659-21027678 | None:intergenic | 20.0% |
| !! | AAATCTGTGATTTAATAGAA+CGG | + | chr5.2:21025980-21025999 | None:intergenic | 20.0% |
| !! | AAGATGCAAAAGATTAATAA+TGG | + | chr5.2:21026087-21026106 | None:intergenic | 20.0% |
| !! | AATAACATTAAATATGTTGC+AGG | - | chr5.2:21028658-21028677 | MS.gene027843:intron | 20.0% |
| !! | AATTCTTCTTACTTATTTGA+AGG | - | chr5.2:21028086-21028105 | MS.gene027843:intron | 20.0% |
| !! | ACAAGAAACATATTAATATC+TGG | + | chr5.2:21025600-21025619 | None:intergenic | 20.0% |
| !! | AGATGCAAAAGATTAATAAT+GGG | + | chr5.2:21026086-21026105 | None:intergenic | 20.0% |
| !! | ATTAAAAAAATTAGACGGAT+AGG | + | chr5.2:21024679-21024698 | None:intergenic | 20.0% |
| !! | GAACTTACATAAATATTTGT+AGG | + | chr5.2:21028041-21028060 | None:intergenic | 20.0% |
| !! | GCAAGATTAAAAAAATTAGA+CGG | + | chr5.2:21024684-21024703 | None:intergenic | 20.0% |
| !! | GTTTCATTCAATTGAAATTA+CGG | + | chr5.2:21025071-21025090 | None:intergenic | 20.0% |
| !! | TGATTGTGTGTTAAAATATT+TGG | - | chr5.2:21026195-21026214 | MS.gene027843:CDS | 20.0% |
| !!! | AATATGTTATTTTTTTGCAG+TGG | - | chr5.2:21025695-21025714 | MS.gene027843:intron | 20.0% |
| !!! | ACTTGGATGTTTTATTATTT+TGG | - | chr5.2:21026305-21026324 | MS.gene027843:intron | 20.0% |
| !!! | ATGTATATATTTGTTGAGTA+TGG | - | chr5.2:21025867-21025886 | MS.gene027843:CDS | 20.0% |
| !!! | ATGTTTTATTATTTTGGTGA+AGG | - | chr5.2:21026311-21026330 | MS.gene027843:intron | 20.0% |
| !!! | CATTTTTTTAGCTTAAGAAA+AGG | - | chr5.2:21028344-21028363 | MS.gene027843:intron | 20.0% |
| !!! | GGTTATTTGATTATATGTTT+TGG | - | chr5.2:21025660-21025679 | MS.gene027843:intron | 20.0% |
| !!! | GTCTAATTTTTTTAATCTTG+CGG | - | chr5.2:21024683-21024702 | MS.gene027843:CDS | 20.0% |
| !!! | TGTTTTATTATTTTGGTGAA+GGG | - | chr5.2:21026312-21026331 | MS.gene027843:intron | 20.0% |
| ! | AAAGCAAATCGATATTGAAA+AGG | + | chr5.2:21024894-21024913 | None:intergenic | 25.0% |
| ! | AAATTCACTGATAAGTTAGT+CGG | - | chr5.2:21025893-21025912 | MS.gene027843:intron | 25.0% |
| ! | AAGCAAATCGATATTGAAAA+GGG | + | chr5.2:21024893-21024912 | None:intergenic | 25.0% |
| ! | AAGTATAATATCGCTTGTTT+GGG | - | chr5.2:21026727-21026746 | MS.gene027843:intron | 25.0% |
| ! | ATAATGCTCATTTCTAAGTT+AGG | - | chr5.2:21027427-21027446 | MS.gene027843:intron | 25.0% |
| ! | ATATAACAGACACAAAAGAA+GGG | + | chr5.2:21029354-21029373 | None:intergenic | 25.0% |
| ! | ATTCTATCTTAAAGAGAACT+TGG | - | chr5.2:21026288-21026307 | MS.gene027843:intron | 25.0% |
| ! | ATTGTAGATTTCACTATAAC+AGG | + | chr5.2:21027103-21027122 | None:intergenic | 25.0% |
| ! | ATTTCAATTGAATGAAACCA+AGG | - | chr5.2:21025073-21025092 | MS.gene027843:intron | 25.0% |
| ! | CTTCAATATCAAGAAAAATG+TGG | + | chr5.2:21028277-21028296 | None:intergenic | 25.0% |
| ! | GATGCAAAAGATTAATAATG+GGG | + | chr5.2:21026085-21026104 | None:intergenic | 25.0% |
| ! | GATTATAAAAACGAATGGAT+AGG | - | chr5.2:21025201-21025220 | MS.gene027843:intron | 25.0% |
| ! | GTGTAAACATGAAAATTTGA+AGG | + | chr5.2:21026978-21026997 | None:intergenic | 25.0% |
| ! | TATAAGTGAGAAATCAATCT+GGG | - | chr5.2:21024943-21024962 | MS.gene027843:CDS | 25.0% |
| ! | TCAATAATATCAGCAATTTC+AGG | + | chr5.2:21025757-21025776 | None:intergenic | 25.0% |
| ! | TCATTACAGATATATTGACA+TGG | - | chr5.2:21026586-21026605 | MS.gene027843:intron | 25.0% |
| ! | TCCTAATTATGAAAGTTCAT+CGG | + | chr5.2:21029441-21029460 | None:intergenic | 25.0% |
| ! | TCTAGTATCACTCAAAAATT+TGG | + | chr5.2:21028400-21028419 | None:intergenic | 25.0% |
| ! | TGCTTGTCTTGAATAATTTA+AGG | - | chr5.2:21026482-21026501 | MS.gene027843:intron | 25.0% |
| ! | TGGGATTGATGTAAATATAT+TGG | + | chr5.2:21024853-21024872 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGTCAACAAACA+AGG | - | chr5.2:21027911-21027930 | MS.gene027843:intron | 25.0% |
| ! | TTAGAGATAATCTTGTAATC+TGG | - | chr5.2:21025953-21025972 | MS.gene027843:intron | 25.0% |
| ! | TTATAAGTGAGAAATCAATC+TGG | - | chr5.2:21024942-21024961 | MS.gene027843:CDS | 25.0% |
| ! | TTATATTTAGAAAATCACGG+TGG | + | chr5.2:21027630-21027649 | None:intergenic | 25.0% |
| !! | ACTGAATAGAGTAATCATTT+TGG | - | chr5.2:21026510-21026529 | MS.gene027843:intron | 25.0% |
| !! | GAAGAATTAGTATCTCTTTT+TGG | + | chr5.2:21028074-21028093 | None:intergenic | 25.0% |
| !! | TATTTACATGTTTGGAATCA+CGG | - | chr5.2:21025463-21025482 | MS.gene027843:CDS | 25.0% |
| !!! | AAGATGCACAATTTTTTAGT+TGG | + | chr5.2:21026564-21026583 | None:intergenic | 25.0% |
| !!! | ATCTTTTGTTTTTCCATTTG+TGG | - | chr5.2:21028475-21028494 | MS.gene027843:intron | 25.0% |
| !!! | ATTTTTCAAAACCAATGGTT+GGG | + | chr5.2:21029565-21029584 | None:intergenic | 25.0% |
| !!! | GTTTTATTATTTTGGTGAAG+GGG | - | chr5.2:21026313-21026332 | MS.gene027843:intron | 25.0% |
| !!! | TCAAATTTTAACAAGCAAAG+CGG | + | chr5.2:21026838-21026857 | None:intergenic | 25.0% |
| !!! | TCTGTTGTTTTTAATTTGAG+CGG | - | chr5.2:21027667-21027686 | MS.gene027843:intron | 25.0% |
| AAAAACGAATGGATAGGATT+TGG | - | chr5.2:21025207-21025226 | MS.gene027843:intron | 30.0% | |
| AAAATTAGACGGATAGGATT+TGG | + | chr5.2:21024673-21024692 | None:intergenic | 30.0% | |
| AAAGATGACAACGTAATTGA+TGG | + | chr5.2:21024803-21024822 | None:intergenic | 30.0% | |
| AACATATTGCAACTTACAAC+AGG | - | chr5.2:21027721-21027740 | MS.gene027843:intron | 30.0% | |
| ACAAAATGAGTTAATCTCTG+TGG | + | chr5.2:21028634-21028653 | None:intergenic | 30.0% | |
| ACCGATGAACTTTCATAATT+AGG | - | chr5.2:21029437-21029456 | MS.gene027843:intron | 30.0% | |
| ACTACATCTGCATAATCAAA+AGG | + | chr5.2:21027827-21027846 | None:intergenic | 30.0% | |
| AGCAAATCGATATTGAAAAG+GGG | + | chr5.2:21024892-21024911 | None:intergenic | 30.0% | |
| ATGACAAACAAATACAGTGA+AGG | - | chr5.2:21026399-21026418 | MS.gene027843:CDS | 30.0% | |
| ATGTTTCATGAGTTCAACTT+AGG | + | chr5.2:21027706-21027725 | None:intergenic | 30.0% | |
| ATTAATATCTGGTGCATCTT+TGG | + | chr5.2:21025589-21025608 | None:intergenic | 30.0% | |
| ATTATCTCTAAACCATACCA+TGG | + | chr5.2:21025944-21025963 | None:intergenic | 30.0% | |
| CAAGACAATAGTTTCTTTGT+TGG | - | chr5.2:21026681-21026700 | MS.gene027843:intron | 30.0% | |
| CAAGTATAATATCGCTTGTT+TGG | - | chr5.2:21026726-21026745 | MS.gene027843:intron | 30.0% | |
| CTAATCATTTGCGTATTAGT+TGG | - | chr5.2:21028833-21028852 | MS.gene027843:intron | 30.0% | |
| GATATAACAGACACAAAAGA+AGG | + | chr5.2:21029355-21029374 | None:intergenic | 30.0% | |
| GTTGATCTTGATAAATCTTG+TGG | - | chr5.2:21029192-21029211 | MS.gene027843:intron | 30.0% | |
| TACATCAATCCCAATGATAA+TGG | - | chr5.2:21024860-21024879 | MS.gene027843:intron | 30.0% | |
| TATAGTCATGAATTCTGTCT+TGG | - | chr5.2:21027230-21027249 | MS.gene027843:intron | 30.0% | |
| TGAAATCTACAATCGATGTA+TGG | - | chr5.2:21027110-21027129 | MS.gene027843:intron | 30.0% | |
| TGATAAATCTTGTGGATTTC+AGG | - | chr5.2:21029200-21029219 | MS.gene027843:intron | 30.0% | |
| TGTTTCATGAGTTCAACTTA+GGG | + | chr5.2:21027705-21027724 | None:intergenic | 30.0% | |
| TTAACACACAATCAAACAGT+TGG | + | chr5.2:21026189-21026208 | None:intergenic | 30.0% | |
| TTATCTCTAAACCATACCAT+GGG | + | chr5.2:21025943-21025962 | None:intergenic | 30.0% | |
| TTTGGTGAATCTCAAGAATA+AGG | - | chr5.2:21028736-21028755 | MS.gene027843:intron | 30.0% | |
| ! | AATCAATCTGGGATATAATG+AGG | - | chr5.2:21024954-21024973 | MS.gene027843:CDS | 30.0% |
| ! | AGACAATGGAAGGTATATAT+AGG | - | chr5.2:21025790-21025809 | MS.gene027843:intron | 30.0% |
| ! | GTAAGATCATTGGACTTTTT+CGG | - | chr5.2:21025095-21025114 | MS.gene027843:intron | 30.0% |
| ! | TTTTGATGCATCTGTGAATT+TGG | - | chr5.2:21029283-21029302 | MS.gene027843:intron | 30.0% |
| !! | AAACATCCATTTTTGTGGAT+CGG | + | chr5.2:21028935-21028954 | None:intergenic | 30.0% |
| !! | AGATGAAACATCCATTTTTG+TGG | + | chr5.2:21028940-21028959 | None:intergenic | 30.0% |
| !! | GATTTTTCAAAACCAATGGT+TGG | + | chr5.2:21029566-21029585 | None:intergenic | 30.0% |
| !! | GCTTGATTTTTCAAAACCAA+TGG | + | chr5.2:21029570-21029589 | None:intergenic | 30.0% |
| !! | TAAGATCATTGGACTTTTTC+GGG | - | chr5.2:21025096-21025115 | MS.gene027843:intron | 30.0% |
| !! | TAAGGGCATAGCTTTTAATT+TGG | + | chr5.2:21025026-21025045 | None:intergenic | 30.0% |
| !!! | AACTTTTTTCAGGGTATTGA+TGG | - | chr5.2:21029010-21029029 | MS.gene027843:intron | 30.0% |
| !!! | CATAGCTTTTAATTTGGTGA+TGG | + | chr5.2:21025020-21025039 | None:intergenic | 30.0% |
| !!! | TTTTTTAGTTGGATTCAGTC+TGG | + | chr5.2:21026553-21026572 | None:intergenic | 30.0% |
| AAAGAAACTGCAAACATACC+TGG | + | chr5.2:21027402-21027421 | None:intergenic | 35.0% | |
| AAAGAGACTTGTGGATTTGA+TGG | - | chr5.2:21025624-21025643 | MS.gene027843:intron | 35.0% | |
| AAAGTCCAATGATCTTACCT+TGG | + | chr5.2:21025093-21025112 | None:intergenic | 35.0% | |
| AAATACAGTGAAGGTTATCC+TGG | - | chr5.2:21026408-21026427 | MS.gene027843:CDS | 35.0% | |
| AGTCAACAAACAAGGAAAAG+AGG | - | chr5.2:21027919-21027938 | MS.gene027843:intron | 35.0% | |
| AGTGGAGAATTCAATTGCTT+TGG | + | chr5.2:21025721-21025740 | None:intergenic | 35.0% | |
| AGTTCGAGAGAACATTGTTA+TGG | - | chr5.2:21028897-21028916 | MS.gene027843:intron | 35.0% | |
| ATAATCATACAGACGTGCAT+AGG | + | chr5.2:21027574-21027593 | None:intergenic | 35.0% | |
| ATATTAGCTGTATGGTTGCT+TGG | - | chr5.2:21029392-21029411 | MS.gene027843:intron | 35.0% | |
| ATCAAGAAAAATGTGGACAG+TGG | + | chr5.2:21028270-21028289 | None:intergenic | 35.0% | |
| ATCAGAGATGTAGACACTAT+TGG | - | chr5.2:21026054-21026073 | MS.gene027843:intron | 35.0% | |
| ATGTCAGTCAACACAACATA+AGG | - | chr5.2:21028590-21028609 | MS.gene027843:CDS | 35.0% | |
| CAAAGAGAATTCACGTGTTT+CGG | - | chr5.2:21025396-21025415 | MS.gene027843:intron | 35.0% | |
| CAAGATCAACTAGTTGAACA+AGG | + | chr5.2:21029182-21029201 | None:intergenic | 35.0% | |
| CTCGACAATGCTTATATGTA+TGG | + | chr5.2:21028781-21028800 | None:intergenic | 35.0% | |
| CTGCATAATCAAAAGGTGAA+GGG | + | chr5.2:21027820-21027839 | None:intergenic | 35.0% | |
| CTTGTTAGAAAAGAGACTTG+TGG | - | chr5.2:21025615-21025634 | MS.gene027843:intron | 35.0% | |
| GAAACCTCATGATAGAATCA+TGG | - | chr5.2:21027007-21027026 | MS.gene027843:CDS | 35.0% | |
| GATTCAGTCTGGTACTTAAA+AGG | + | chr5.2:21026542-21026561 | None:intergenic | 35.0% | |
| GCTAATAAAAACACTGTTCC+TGG | - | chr5.2:21029073-21029092 | MS.gene027843:intron | 35.0% | |
| GGGAAATAGCCATTATCATT+GGG | + | chr5.2:21024872-21024891 | None:intergenic | 35.0% | |
| GGTAGACGAAATTTCTCATT+AGG | - | chr5.2:21026247-21026266 | MS.gene027843:intron | 35.0% | |
| GTGCTTTCATCCAATCTATA+TGG | + | chr5.2:21027361-21027380 | None:intergenic | 35.0% | |
| TAAGAAAAGGGTTTGTCTGA+GGG | - | chr5.2:21028357-21028376 | MS.gene027843:intron | 35.0% | |
| TATCCTGGAGCAAGATATTA+CGG | - | chr5.2:21026423-21026442 | MS.gene027843:CDS | 35.0% | |
| TCTACAATCGATGTATGGAT+TGG | - | chr5.2:21027115-21027134 | MS.gene027843:intron | 35.0% | |
| TCTGCATAATCAAAAGGTGA+AGG | + | chr5.2:21027821-21027840 | None:intergenic | 35.0% | |
| TCTTGGTATGCTTTATACTC+TGG | + | chr5.2:21028516-21028535 | None:intergenic | 35.0% | |
| TGAAACCAAGGTAAGATCAT+TGG | - | chr5.2:21025085-21025104 | MS.gene027843:intron | 35.0% | |
| TGAGACAATGCCATATAGAT+TGG | - | chr5.2:21027348-21027367 | MS.gene027843:CDS | 35.0% | |
| TGCTTCTTCTGTTTACTACA+AGG | - | chr5.2:21024464-21024483 | MS.gene027843:CDS | 35.0% | |
| TGTCAGTCAACACAACATAA+GGG | - | chr5.2:21028591-21028610 | MS.gene027843:CDS | 35.0% | |
| TTAAGAAAAGGGTTTGTCTG+AGG | - | chr5.2:21028356-21028375 | MS.gene027843:intron | 35.0% | |
| ! | AATCTGGGATATAATGAGGT+AGG | - | chr5.2:21024958-21024977 | MS.gene027843:CDS | 35.0% |
| ! | AGAGAAGTGAAGTTTTCTGA+TGG | + | chr5.2:21026351-21026370 | None:intergenic | 35.0% |
| ! | AGAGACAGCAGATATCTTTT+TGG | + | chr5.2:21027320-21027339 | None:intergenic | 35.0% |
| ! | AGGATACATTGATTATGACC+AGG | - | chr5.2:21027381-21027400 | MS.gene027843:CDS | 35.0% |
| ! | GGTATGTTTGCAGTTTCTTT+TGG | - | chr5.2:21027402-21027421 | MS.gene027843:intron | 35.0% |
| ! | GTTTTTCCATTTGTGGATTC+AGG | - | chr5.2:21028482-21028501 | MS.gene027843:intron | 35.0% |
| ! | TAAGGTTTGAAATCTGCACT+TGG | - | chr5.2:21026812-21026831 | MS.gene027843:intron | 35.0% |
| ! | TATAGATTGGATGAAAGCAC+AGG | - | chr5.2:21027361-21027380 | MS.gene027843:CDS | 35.0% |
| ! | TGTTGTGAAGAAGCATGATA+TGG | - | chr5.2:21026226-21026245 | MS.gene027843:CDS | 35.0% |
| !! | AGCAGATATCTTTTTGGTGT+CGG | + | chr5.2:21027314-21027333 | None:intergenic | 35.0% |
| !! | CAGCTCTAAAGAAAACAGAT+AGG | + | chr5.2:21026121-21026140 | None:intergenic | 35.0% |
| !! | GAATTTGGCTTTGAAGATCA+AGG | - | chr5.2:21029298-21029317 | MS.gene027843:intron | 35.0% |
| !! | GACTGAGAATCATCTAGTTT+TGG | - | chr5.2:21028718-21028737 | MS.gene027843:intron | 35.0% |
| !! | TTTGATGGTTCTGAATGTGA+AGG | - | chr5.2:21025639-21025658 | MS.gene027843:intron | 35.0% |
| !!! | AATTAGTTTTGGCCTGAAGA+GGG | + | chr5.2:21027535-21027554 | None:intergenic | 35.0% |
| !!! | AGCTATGATCTTTTTCAGGA+AGG | - | chr5.2:21027886-21027905 | MS.gene027843:intron | 35.0% |
| !!! | AGCTTTTAATTTGGTGATGG+CGG | + | chr5.2:21025017-21025036 | None:intergenic | 35.0% |
| !!! | CTATCTGTTTTCTTTAGAGC+TGG | - | chr5.2:21026119-21026138 | MS.gene027843:CDS | 35.0% |
| !!! | GCTATGATCTTTTTCAGGAA+GGG | - | chr5.2:21027887-21027906 | MS.gene027843:intron | 35.0% |
| AAAAAGATCATAGCTCCACG+TGG | + | chr5.2:21027881-21027900 | None:intergenic | 40.0% | |
| AACTCCTGCTCTTACTTCAA+GGG | - | chr5.2:21029223-21029242 | MS.gene027843:intron | 40.0% | |
| AAGAAAAGGGTTTGTCTGAG+GGG | - | chr5.2:21028358-21028377 | MS.gene027843:intron | 40.0% | |
| ACATCTTTCTCATGGTTACC+AGG | - | chr5.2:21027052-21027071 | MS.gene027843:intron | 40.0% | |
| ACTGATAAGTTAGTCGGAAG+AGG | - | chr5.2:21025899-21025918 | MS.gene027843:intron | 40.0% | |
| AGATGATAGTTGACCATACC+TGG | + | chr5.2:21027073-21027092 | None:intergenic | 40.0% | |
| AGCTGTGATGTTAGCAGATA+TGG | - | chr5.2:21027760-21027779 | MS.gene027843:intron | 40.0% | |
| AGCTTGAGAAAGCTAGACAA+TGG | - | chr5.2:21025776-21025795 | MS.gene027843:intron | 40.0% | |
| AGGCCAAAACTAATTGTTGC+TGG | - | chr5.2:21027540-21027559 | MS.gene027843:intron | 40.0% | |
| AGTGCCATGATTCTATCATG+AGG | + | chr5.2:21027014-21027033 | None:intergenic | 40.0% | |
| ATCTAACCGAAATGCTTCCA+AGG | + | chr5.2:21026636-21026655 | None:intergenic | 40.0% | |
| CAATTGCGCAAAATTTGCAC+AGG | - | chr5.2:21028548-21028567 | MS.gene027843:intron | 40.0% | |
| CACTGCTGATATTAGCTGTA+TGG | - | chr5.2:21029384-21029403 | MS.gene027843:intron | 40.0% | |
| CAGCTAAACCAGTAATGGTA+TGG | + | chr5.2:21028179-21028198 | None:intergenic | 40.0% | |
| CCAGAGCATGATTATTGAGT+AGG | - | chr5.2:21025124-21025143 | MS.gene027843:intron | 40.0% | |
| CCTAAAACAATGTGTGTTGC+AGG | + | chr5.2:21024756-21024775 | None:intergenic | 40.0% | |
| CCTACTCAATAATCATGCTC+TGG | + | chr5.2:21025127-21025146 | None:intergenic | 40.0% | |
| CTATCTGTTATGCAAGCTGT+TGG | - | chr5.2:21026369-21026388 | MS.gene027843:intron | 40.0% | |
| CTGGTGCATCTTTGGATTAA+CGG | + | chr5.2:21025581-21025600 | None:intergenic | 40.0% | |
| GCAAAACAATTCCCAACCAT+TGG | - | chr5.2:21029551-21029570 | MS.gene027843:CDS | 40.0% | |
| GCAAGGTAACACATTCACAA+GGG | - | chr5.2:21027604-21027623 | MS.gene027843:CDS | 40.0% | |
| GCAATTGAATTCTCCACTTG+AGG | - | chr5.2:21025723-21025742 | MS.gene027843:intron | 40.0% | |
| GGGGAAATAGCCATTATCAT+TGG | + | chr5.2:21024873-21024892 | None:intergenic | 40.0% | |
| GTATAAAGCATACCAAGAGC+AGG | - | chr5.2:21028518-21028537 | MS.gene027843:intron | 40.0% | |
| TAGGCAACGAAATAGAGGAA+TGG | - | chr5.2:21024977-21024996 | MS.gene027843:intron | 40.0% | |
| TCAGGATCAATTTCCTCAAG+TGG | + | chr5.2:21025739-21025758 | None:intergenic | 40.0% | |
| TCGGTTAGATCCAGCTAAAT+GGG | - | chr5.2:21026646-21026665 | MS.gene027843:CDS | 40.0% | |
| TGAGAAAGCTAGACAATGGA+AGG | - | chr5.2:21025780-21025799 | MS.gene027843:intron | 40.0% | |
| TGAGGGGTTTATTTGAAGAG+TGG | - | chr5.2:21028374-21028393 | MS.gene027843:intron | 40.0% | |
| TGTATGGTCAAAGAGTTGTC+AGG | + | chr5.2:21028765-21028784 | None:intergenic | 40.0% | |
| TGTGTGTTGCAGGTGATTAA+CGG | + | chr5.2:21024746-21024765 | None:intergenic | 40.0% | |
| TTAATCTCTGTGGTCCAACA+AGG | + | chr5.2:21028624-21028643 | None:intergenic | 40.0% | |
| TTCGGTTAGATCCAGCTAAA+TGG | - | chr5.2:21026645-21026664 | MS.gene027843:CDS | 40.0% | |
| TTGTAGCCTGAATCCACAAA+TGG | + | chr5.2:21028491-21028510 | None:intergenic | 40.0% | |
| TTGTCATAGACAGCTTCATC+AGG | + | chr5.2:21025379-21025398 | None:intergenic | 40.0% | |
| TTGTGTCCGATCCACAAAAA+TGG | - | chr5.2:21028926-21028945 | MS.gene027843:intron | 40.0% | |
| TTTCTCATGGTTACCAGGTA+TGG | - | chr5.2:21027057-21027076 | MS.gene027843:intron | 40.0% | |
| TTTGAAGGTGAACCAGACAA+AGG | + | chr5.2:21026963-21026982 | None:intergenic | 40.0% | |
| ! | AATTTTGTTCAGGCCTTCAG+GGG | + | chr5.2:21027949-21027968 | None:intergenic | 40.0% |
| ! | ACGCAAATGATTAGCACTGA+AGG | + | chr5.2:21028827-21028846 | None:intergenic | 40.0% |
| ! | CCTGCAACACACATTGTTTT+AGG | - | chr5.2:21024753-21024772 | MS.gene027843:CDS | 40.0% |
| ! | GAATTTTGTTCAGGCCTTCA+GGG | + | chr5.2:21027950-21027969 | None:intergenic | 40.0% |
| ! | GACAACGTAATTGATGGCAA+TGG | + | chr5.2:21024797-21024816 | None:intergenic | 40.0% |
| ! | GTGGAGCTATGATCTTTTTC+AGG | - | chr5.2:21027882-21027901 | MS.gene027843:intron | 40.0% |
| ! | TCTCTCATGAGCTTTTCTGA+TGG | - | chr5.2:21026863-21026882 | MS.gene027843:intron | 40.0% |
| ! | TGAATTTTGTTCAGGCCTTC+AGG | + | chr5.2:21027951-21027970 | None:intergenic | 40.0% |
| ! | TTTTGATCAGCAACGAGTAG+AGG | + | chr5.2:21024828-21024847 | None:intergenic | 40.0% |
| !! | GAAGGTGTTCTATGACTATG+AGG | - | chr5.2:21028104-21028123 | MS.gene027843:intron | 40.0% |
| !! | GCACCAGCAACAATTAGTTT+TGG | + | chr5.2:21027546-21027565 | None:intergenic | 40.0% |
| !! | GTTATGAGCTTGTTTCTGGT+GGG | - | chr5.2:21028696-21028715 | MS.gene027843:intron | 40.0% |
| !! | TCGATGTATGGATTGGCTTA+TGG | - | chr5.2:21027122-21027141 | MS.gene027843:intron | 40.0% |
| !!! | CAATTAGTTTTGGCCTGAAG+AGG | + | chr5.2:21027536-21027555 | None:intergenic | 40.0% |
| !!! | TATTATTTTGGTGAAGGGGC+TGG | - | chr5.2:21026317-21026336 | MS.gene027843:intron | 40.0% |
| AACAAAATCACGTGTCACCG+CGG | + | chr5.2:21025503-21025522 | None:intergenic | 45.0% | |
| AAGATCAAGGCAGAGAGCAA+AGG | - | chr5.2:21029311-21029330 | MS.gene027843:intron | 45.0% | |
| AATCCCCTTGAAGTAAGAGC+AGG | + | chr5.2:21029230-21029249 | None:intergenic | 45.0% | |
| AATTGCTGAGAACCTGCTCT+TGG | + | chr5.2:21028533-21028552 | None:intergenic | 45.0% | |
| ACAACTCACAAGTCACTTCG+TGG | - | chr5.2:21027854-21027873 | MS.gene027843:intron | 45.0% | |
| ACTCCTGCTCTTACTTCAAG+GGG | - | chr5.2:21029224-21029243 | MS.gene027843:intron | 45.0% | |
| AGAAATCTGCTACCCTCTTC+AGG | - | chr5.2:21027520-21027539 | MS.gene027843:intron | 45.0% | |
| AGTCAACACAACATAAGGGC+TGG | - | chr5.2:21028595-21028614 | MS.gene027843:CDS | 45.0% | |
| ATACCACACACACTCTCAGT+CGG | + | chr5.2:21028427-21028446 | None:intergenic | 45.0% | |
| ATCAATCAAGCTGTCTTCCC+TGG | - | chr5.2:21028132-21028151 | MS.gene027843:intron | 45.0% | |
| CAAGCTTCGTCATGATGTTG+AGG | - | chr5.2:21029523-21029542 | MS.gene027843:CDS | 45.0% | |
| CATGGAGGACATCTTTCTCA+TGG | - | chr5.2:21027044-21027063 | MS.gene027843:intron | 45.0% | |
| CCAGTAATGGTATGGTTGTG+AGG | + | chr5.2:21028171-21028190 | None:intergenic | 45.0% | |
| CCTCACAACCATACCATTAC+TGG | - | chr5.2:21028168-21028187 | MS.gene027843:intron | 45.0% | |
| CGCAACAGCTAAACCAGTAA+TGG | + | chr5.2:21028184-21028203 | None:intergenic | 45.0% | |
| CGCAAGGTAACACATTCACA+AGG | - | chr5.2:21027603-21027622 | MS.gene027843:CDS | 45.0% | |
| CGGTTAGATCCAGCTAAATG+GGG | - | chr5.2:21026647-21026666 | MS.gene027843:CDS | 45.0% | |
| CTCAACATCATGACGAAGCT+TGG | + | chr5.2:21029525-21029544 | None:intergenic | 45.0% | |
| GAACTCCTGCTCTTACTTCA+AGG | - | chr5.2:21029222-21029241 | MS.gene027843:intron | 45.0% | |
| GAGAAAGATGTCCTCCATGA+GGG | + | chr5.2:21027043-21027062 | None:intergenic | 45.0% | |
| GCAGATATGGCACATATCAG+TGG | - | chr5.2:21027773-21027792 | MS.gene027843:intron | 45.0% | |
| GCGGCTGACAATTATTCACA+TGG | - | chr5.2:21024702-21024721 | MS.gene027843:CDS | 45.0% | |
| TATGGCACATATCAGTGGAC+TGG | - | chr5.2:21027778-21027797 | MS.gene027843:intron | 45.0% | |
| TCTCTAAACCATACCATGGG+AGG | + | chr5.2:21025940-21025959 | None:intergenic | 45.0% | |
| TGAATTTAGCATGCCTCCCA+TGG | - | chr5.2:21025924-21025943 | MS.gene027843:intron | 45.0% | |
| TGAGAAAGATGTCCTCCATG+AGG | + | chr5.2:21027044-21027063 | None:intergenic | 45.0% | |
| TGAGGTAGGCAACGAAATAG+AGG | - | chr5.2:21024972-21024991 | MS.gene027843:intron | 45.0% | |
| TGATTATGCACGCATTCGCA+AGG | - | chr5.2:21027587-21027606 | MS.gene027843:CDS | 45.0% | |
| TGCACGTTCACTGCAAATCA+GGG | + | chr5.2:21026939-21026958 | None:intergenic | 45.0% | |
| TTAGATCCAGCTAAATGGGG+AGG | - | chr5.2:21026650-21026669 | MS.gene027843:CDS | 45.0% | |
| TTCCAACACCTTCTCAACTC+TGG | + | chr5.2:21029038-21029057 | None:intergenic | 45.0% | |
| TTCTTACCTCCCCATTTAGC+TGG | + | chr5.2:21026659-21026678 | None:intergenic | 45.0% | |
| TTTAGCTGTTGCGTTGAAGC+AGG | - | chr5.2:21028191-21028210 | MS.gene027843:intron | 45.0% | |
| ! | AATCAGCAAAGAGCACGCTA+AGG | - | chr5.2:21026794-21026813 | MS.gene027843:intron | 45.0% |
| ! | ACGAAGTGACTTGTGAGTTG+TGG | + | chr5.2:21027855-21027874 | None:intergenic | 45.0% |
| !! | ACAGAAGAAGCACTGAAGAG+AGG | + | chr5.2:21024456-21024475 | None:intergenic | 45.0% |
| !!! | AGTTTTTAAAATTTTTAAAA+TGG | - | chr5.2:21028295-21028314 | MS.gene027843:intron | 5.0% |
| AATCTCTGACTGCACGTAGG+AGG | + | chr5.2:21029501-21029520 | None:intergenic | 50.0% | |
| ACCATAGCAGACACATCTCC+AGG | + | chr5.2:21029094-21029113 | None:intergenic | 50.0% | |
| ATACCCATCCTGATACCACC+AGG | + | chr5.2:21029118-21029137 | None:intergenic | 50.0% | |
| ATGGCACTTGATCTCCCTCA+TGG | - | chr5.2:21027026-21027045 | MS.gene027843:CDS | 50.0% | |
| CAATGGCAATGGCTCTTCGT+AGG | - | chr5.2:21024400-21024419 | MS.gene027843:CDS | 50.0% | |
| CCTCCGTAATATCTTGCTCC+AGG | + | chr5.2:21026429-21026448 | None:intergenic | 50.0% | |
| CCTGGAGCAAGATATTACGG+AGG | - | chr5.2:21026426-21026445 | MS.gene027843:CDS | 50.0% | |
| CGGTGAGTTTGACAAAACCG+CGG | - | chr5.2:21025483-21025502 | MS.gene027843:intron | 50.0% | |
| CGTCGAGGAGGATTTCGTTA+AGG | - | chr5.2:21029250-21029269 | MS.gene027843:intron | 50.0% | |
| CTATGGTTCCTGGTGGTATC+AGG | - | chr5.2:21029107-21029126 | MS.gene027843:intron | 50.0% | |
| CTGCACGTTCACTGCAAATC+AGG | + | chr5.2:21026940-21026959 | None:intergenic | 50.0% | |
| GATGTGTCTGCTATGGTTCC+TGG | - | chr5.2:21029097-21029116 | MS.gene027843:intron | 50.0% | |
| GCACGTTCACTGCAAATCAG+GGG | + | chr5.2:21026938-21026957 | None:intergenic | 50.0% | |
| GGAAATCTCTGACTGCACGT+AGG | + | chr5.2:21029504-21029523 | None:intergenic | 50.0% | |
| GTTCCTGGTGGTATCAGGAT+GGG | - | chr5.2:21029112-21029131 | MS.gene027843:intron | 50.0% | |
| TACTTCAAGGGGATTCGTCG+AGG | - | chr5.2:21029235-21029254 | MS.gene027843:intron | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | - | chr5.2:21025232-21025251 | MS.gene027843:intron | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | + | chr5.2:21025251-21025232 | None:intergenic | 50.0% | |
| TCCTGGAGATGTGTCTGCTA+TGG | - | chr5.2:21029090-21029109 | MS.gene027843:intron | 50.0% | |
| TGATGGCTCCAGAGTTGAGA+AGG | - | chr5.2:21029027-21029046 | MS.gene027843:intron | 50.0% | |
| TTAGCATGCCTCCCATGGTA+TGG | - | chr5.2:21025929-21025948 | MS.gene027843:intron | 50.0% | |
| ! | ACTATGCCAAAAGCGTGCCT+TGG | - | chr5.2:21026616-21026635 | MS.gene027843:CDS | 50.0% |
| ! | ATACCGACTGAGAGTGTGTG+TGG | - | chr5.2:21028421-21028440 | MS.gene027843:intron | 50.0% |
| ! | ATGCTTCCAAGGCACGCTTT+TGG | + | chr5.2:21026625-21026644 | None:intergenic | 50.0% |
| ! | CTCCAGAGTTGAGAAGGTGT+TGG | - | chr5.2:21029033-21029052 | MS.gene027843:intron | 50.0% |
| !! | AGCGTGCCTTGGAAGCATTT+CGG | - | chr5.2:21026627-21026646 | MS.gene027843:CDS | 50.0% |
| !! | ATAAGGGCTGGTCTCCTTGT+TGG | - | chr5.2:21028607-21028626 | MS.gene027843:CDS | 50.0% |
| AAGTCACTTCGTGGACCACG+TGG | - | chr5.2:21027863-21027882 | MS.gene027843:intron | 55.0% | |
| AGACAGGATCCGTTGACACC+AGG | - | chr5.2:21024627-21024646 | MS.gene027843:intron | 55.0% | |
| AGACAGGATCCGTTGACACC+AGG | + | chr5.2:21024646-21024627 | None:intergenic | 55.0% | |
| CCGTTGACACCAGGTGTCAA+CGG | - | chr5.2:21024636-21024655 | MS.gene027843:intron | 55.0% | |
| CCGTTGACACCAGGTGTCAA+CGG | + | chr5.2:21024655-21024636 | None:intergenic | 55.0% | |
| GCACTTGATCTCCCTCATGG+AGG | - | chr5.2:21027029-21027048 | MS.gene027843:CDS | 55.0% | |
| GGTTCCTGGTGGTATCAGGA+TGG | - | chr5.2:21029111-21029130 | MS.gene027843:intron | 55.0% | |
| GTGAACGTGCAGCCTTTGTC+TGG | - | chr5.2:21026948-21026967 | MS.gene027843:CDS | 55.0% | |
| GTGTCTGCTATGGTTCCTGG+TGG | - | chr5.2:21029100-21029119 | MS.gene027843:intron | 55.0% | |
| TTCAAGGGGATTCGTCGAGG+AGG | - | chr5.2:21029238-21029257 | MS.gene027843:intron | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | - | chr5.2:21025241-21025260 | MS.gene027843:intron | 55.0% |
| ! | CCGTTGACACCTGGTGTCAA+CGG | + | chr5.2:21025260-21025241 | None:intergenic | 55.0% |
| ! | GAAAAGAGGTGCACCCCTGA+AGG | - | chr5.2:21027933-21027952 | MS.gene027843:intron | 55.0% |
| !! | ATCAGTGGACTGGTTGCAGC+TGG | - | chr5.2:21027788-21027807 | MS.gene027843:intron | 55.0% |
| GAGGACCACCTTGCAGTCCA+GGG | + | chr5.2:21028152-21028171 | None:intergenic | 60.0% | |
| GCTGTCTTCCCTGGACTGCA+AGG | - | chr5.2:21028141-21028160 | MS.gene027843:intron | 60.0% | |
| GTCTTCCCTGGACTGCAAGG+TGG | - | chr5.2:21028144-21028163 | MS.gene027843:intron | 60.0% | |
| TGAGGACCACCTTGCAGTCC+AGG | + | chr5.2:21028153-21028172 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 21024396 | 21029607 | 21024396 | ID=MS.gene027843 |
| chr5.2 | mRNA | 21024396 | 21029607 | 21024396 | ID=MS.gene027843.t1;Parent=MS.gene027843 |
| chr5.2 | exon | 21029518 | 21029607 | 21029518 | ID=MS.gene027843.t1.exon1;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21029518 | 21029607 | 21029518 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21028586 | 21028636 | 21028586 | ID=MS.gene027843.t1.exon2;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21028586 | 21028636 | 21028586 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21028202 | 21028288 | 21028202 | ID=MS.gene027843.t1.exon3;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21028202 | 21028288 | 21028202 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21027549 | 21027670 | 21027549 | ID=MS.gene027843.t1.exon4;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21027549 | 21027670 | 21027549 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21027332 | 21027408 | 21027332 | ID=MS.gene027843.t1.exon5;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21027332 | 21027408 | 21027332 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21026930 | 21027054 | 21026930 | ID=MS.gene027843.t1.exon6;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21026930 | 21027054 | 21026930 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21026601 | 21026693 | 21026601 | ID=MS.gene027843.t1.exon7;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21026601 | 21026693 | 21026601 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21026395 | 21026487 | 21026395 | ID=MS.gene027843.t1.exon8;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21026395 | 21026487 | 21026395 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21026063 | 21026260 | 21026063 | ID=MS.gene027843.t1.exon9;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21026063 | 21026260 | 21026063 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21025791 | 21025895 | 21025791 | ID=MS.gene027843.t1.exon10;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21025791 | 21025895 | 21025791 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21025434 | 21025499 | 21025434 | ID=MS.gene027843.t1.exon11;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21025434 | 21025499 | 21025434 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21025246 | 21025323 | 21025246 | ID=MS.gene027843.t1.exon12;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21025246 | 21025323 | 21025246 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21024870 | 21024981 | 21024870 | ID=MS.gene027843.t1.exon13;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21024870 | 21024981 | 21024870 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21024671 | 21024781 | 21024671 | ID=MS.gene027843.t1.exon14;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21024671 | 21024781 | 21024671 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| chr5.2 | exon | 21024396 | 21024544 | 21024396 | ID=MS.gene027843.t1.exon15;Parent=MS.gene027843.t1 |
| chr5.2 | CDS | 21024396 | 21024544 | 21024396 | ID=cds.MS.gene027843.t1;Parent=MS.gene027843.t1 |
| Gene Sequence |
| Protein sequence |
