AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027972

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027972.t1 MTR_5g028930 67.575 697 149 4 1 697 1 620 0.0 910
MS.gene027972.t1 MTR_5g028450 56.908 304 128 3 398 700 1 302 6.20e-107 327
MS.gene027972.t1 MTR_5g028190 51.622 339 155 5 358 693 200 532 4.21e-106 333
MS.gene027972.t1 MTR_5g028190 40.099 202 105 6 90 284 12 204 1.83e-29 123
MS.gene027972.t1 MTR_5g028130 47.953 342 165 6 358 693 2 336 2.83e-95 298
MS.gene027972.t1 MTR_5g028830 56.134 269 98 8 238 499 33 288 3.82e-81 259
MS.gene027972.t1 MTR_5g028900 76.506 166 28 1 501 666 3 157 2.09e-80 253
MS.gene027972.t1 MTR_5g028690 61.353 207 79 1 495 700 36 242 3.96e-80 255
MS.gene027972.t1 MTR_5g028510 47.945 292 132 8 2 275 38 327 2.52e-71 235
MS.gene027972.t1 MTR_5g028920 66.250 160 46 2 343 502 76 227 4.52e-63 210
MS.gene027972.t1 MTR_2g438740 36.770 291 178 4 389 678 269 554 9.49e-51 186
MS.gene027972.t1 MTR_5g028840 48.223 197 101 1 500 695 2 198 4.42e-50 174
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 94 327 5.13e-45 165
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 157 390 2.73e-44 164
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 209 442 7.13e-44 164
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 237 470 1.11e-43 164
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 235 468 1.52e-43 164
MS.gene027972.t1 MTR_5g028110 45.408 196 83 5 502 696 4 176 2.15e-43 154
MS.gene027972.t1 MTR_3g055310 38.174 241 141 4 435 674 262 495 2.56e-43 164
MS.gene027972.t1 MTR_2g438760 36.475 244 153 2 401 643 273 515 2.96e-43 165
MS.gene027972.t1 MTR_2g438700 33.333 306 191 3 401 697 402 703 1.90e-42 164
MS.gene027972.t1 MTR_6g017215 44.444 189 99 2 496 683 2 185 2.26e-42 154
MS.gene027972.t1 MTR_2g438720 33.904 292 189 2 401 692 404 691 2.97e-42 164
MS.gene027972.t1 MTR_2g438400 31.507 292 195 2 401 692 258 544 4.08e-41 158
MS.gene027972.t1 MTR_5g091220 37.262 263 157 4 435 696 350 605 1.30e-40 157
MS.gene027972.t1 MTR_3g455790 39.726 219 128 3 435 652 345 560 2.53e-40 157
MS.gene027972.t1 MTR_2g438440 34.818 247 160 1 401 647 399 644 1.94e-39 155
MS.gene027972.t1 MTR_2g438640 31.392 309 202 3 396 697 399 704 9.54e-38 150
MS.gene027972.t1 MTR_2g438640 31.068 309 177 3 396 697 399 678 7.45e-34 138
MS.gene027972.t1 MTR_3g452020 25.524 572 343 17 90 652 64 561 3.51e-33 135
MS.gene027972.t1 MTR_3g452020 35.616 219 137 3 435 652 170 385 1.10e-31 128
MS.gene027972.t1 MTR_2g020510 31.667 300 190 7 398 691 390 680 1.12e-31 132
MS.gene027972.t1 MTR_2g020450 32.857 280 176 5 398 674 393 663 3.65e-31 130
MS.gene027972.t1 MTR_2g017930 26.418 617 381 22 81 654 23 609 1.75e-28 122
MS.gene027972.t1 MTR_2g020470 30.605 281 162 7 398 674 392 643 2.09e-28 121
MS.gene027972.t1 MTR_3g050500 28.521 284 192 5 397 674 427 705 4.07e-28 120
MS.gene027972.t1 MTR_2g438640 34.634 205 125 2 500 697 399 601 1.42e-26 115
MS.gene027972.t1 MTR_5g085350 29.720 286 194 3 399 681 425 706 4.90e-25 111
MS.gene027972.t1 MTR_5g085350 29.720 286 194 3 399 681 438 719 5.79e-25 110
MS.gene027972.t1 MTR_3g058570 32.432 259 161 5 394 643 80 333 7.58e-25 107
MS.gene027972.t1 MTR_5g085340 29.252 294 187 4 399 681 444 727 9.86e-25 110
MS.gene027972.t1 MTR_5g085360 31.364 220 139 5 467 682 508 719 1.11e-23 107
MS.gene027972.t1 MTR_3g051060 25.694 288 210 3 399 684 435 720 2.46e-23 105
MS.gene027972.t1 MTR_1g113820 26.950 282 199 5 396 675 274 550 7.04e-22 100
MS.gene027972.t1 MTR_1g113730 29.258 229 154 6 389 614 37 260 1.03e-19 92.0
MS.gene027972.t1 MTR_1g113760 26.103 272 181 5 389 645 231 497 5.12e-18 88.6
MS.gene027972.t1 MTR_2g438580 36.585 82 52 0 514 595 2 83 3.47e-13 65.9
MS.gene027972.t1 MTR_2g438470 30.882 136 93 1 440 575 363 497 4.48e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027972.t1 AT3G18670 29.148 669 388 19 44 691 37 640 2.56e-77 261
MS.gene027972.t1 AT3G18670 36.391 338 206 6 358 691 253 585 2.79e-62 219
MS.gene027972.t1 AT3G18670 26.160 237 134 10 44 264 37 248 7.92e-11 65.9
MS.gene027972.t1 AT5G04690 28.243 609 362 16 95 697 111 650 3.17e-54 197
MS.gene027972.t1 AT5G04690 28.289 608 349 17 95 697 111 636 2.41e-53 195
MS.gene027972.t1 AT5G35810 34.737 285 172 4 373 650 16 293 1.01e-50 180
MS.gene027972.t1 AT5G04700 27.165 589 358 15 110 692 132 655 2.67e-49 184
MS.gene027972.t1 AT5G04730 26.565 655 386 21 72 697 5 593 3.11e-49 182
MS.gene027972.t1 AT5G04690 31.313 396 250 7 304 697 241 616 3.55e-49 183
MS.gene027972.t1 AT5G04680 26.789 601 382 19 110 692 119 679 4.36e-46 175
MS.gene027972.t1 AT5G04680 31.034 319 202 6 386 692 215 527 4.69e-41 158
MS.gene027972.t1 AT5G04680 32.188 320 197 8 386 692 324 636 9.30e-41 159
MS.gene027972.t1 AT5G04680 31.034 319 202 6 386 692 338 650 1.33e-40 158
MS.gene027972.t1 AT3G54065 40.116 172 94 2 487 651 9 178 5.25e-35 133

Find 138 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACATTAAAGGGTTTAA+TGG 0.182928 5.2:+19806562 MS.gene027972:CDS
CATTAAACCCTTTAATGTTT+TGG 0.198298 5.2:-19806561 None:intergenic
TACTTAATCCAAAACATTAA+AGG 0.221375 5.2:+19806553 MS.gene027972:CDS
ATTAAAGGGTTTAATGGTTT+AGG 0.228066 5.2:+19806568 MS.gene027972:CDS
ATATACCACTTATGAACTTA+TGG 0.238461 5.2:+19806519 MS.gene027972:CDS
TGCAGCAGCCTTTACTATTC+CGG 0.246841 5.2:+19807235 MS.gene027972:CDS
GTGTATGGTGGAAAGTAAAA+TGG 0.254253 5.2:+19799305 MS.gene027972:CDS
TGCGCTTAACATGATCTTAA+AGG 0.259010 5.2:+19807493 MS.gene027972:CDS
TATCTTTACTCCAAAACTTC+TGG 0.259962 5.2:+19799414 MS.gene027972:CDS
CGGCTTTCACCAGCTCTTCA+TGG 0.269202 5.2:-19807142 None:intergenic
GAACACTTCTCCAGAAGTTT+TGG 0.270676 5.2:-19799424 None:intergenic
TTAAAGGGTTTAATGGTTTA+GGG 0.271577 5.2:+19806569 MS.gene027972:CDS
AAGAGAAATTCAATGGTTTA+AGG 0.273664 5.2:+19806906 MS.gene027972:CDS
TGTATGGCGGCTGGAGTATT+TGG 0.275828 5.2:+19799486 MS.gene027972:CDS
TCTCTTTGTATTTGCATAAC+AGG 0.278716 5.2:-19806889 None:intergenic
CAAGTGACTCCATGCATCTT+TGG 0.284348 5.2:-19798837 None:intergenic
TTTCAAGTATCTAAATATCT+TGG 0.290313 5.2:+19802147 MS.gene027972:CDS
GGTGAATCACATCCGCTCTA+AGG 0.300197 5.2:+19807514 MS.gene027972:CDS
AACATACCTAGTAGCTTTAT+AGG 0.301270 5.2:-19801975 None:intergenic
AAAGAATTTGAAGACGACTA+TGG 0.302970 5.2:+19801825 MS.gene027972:CDS
CGCTCTAAGGGATTCGTTCT+CGG 0.324313 5.2:+19807527 MS.gene027972:CDS
GCAGCAGCCTTTACTATTCC+GGG 0.326327 5.2:+19807236 MS.gene027972:CDS
ATACTTCGCAATGTCGGATT+CGG 0.327314 5.2:-19801853 None:intergenic
GCTTCATTAAATAGATCATC+TGG 0.328944 5.2:-19800468 None:intergenic
CTCTAATCGCGTTGGCAGAT+GGG 0.336731 5.2:+19806864 MS.gene027972:CDS
ATTCTCTGTCTTAGTTTCAT+TGG 0.338640 5.2:+19800539 MS.gene027972:CDS
CCATCTGCCAACGCGATTAG+AGG 0.344924 5.2:-19806863 None:intergenic
CATTTCTTTATGTCCTTTAC+CGG 0.346166 5.2:-19799385 None:intergenic
ACTTAATCCAAAACATTAAA+GGG 0.350041 5.2:+19806554 MS.gene027972:CDS
TGGAGAACTCCCCGTTCATT+TGG 0.365899 5.2:+19799359 MS.gene027972:CDS
CTTTCAATGAATACCTCATA+TGG 0.368614 5.2:-19807119 None:intergenic
ATCATGCGGACGACAGATTC+AGG 0.371993 5.2:+19798790 MS.gene027972:CDS
CCTCTAATCGCGTTGGCAGA+TGG 0.376104 5.2:+19806863 MS.gene027972:CDS
TGAAGATGTCAAAATATATC+AGG 0.377702 5.2:+19799092 MS.gene027972:CDS
TACTTCGCAATGTCGGATTC+GGG 0.381041 5.2:-19801852 None:intergenic
TTCAAGTATCTAAATATCTT+GGG 0.385022 5.2:+19802148 MS.gene027972:CDS
TATACCACTTATGAACTTAT+GGG 0.386336 5.2:+19806520 MS.gene027972:CDS
CCGGGTGGAAACAACCAAAC+TGG 0.386661 5.2:+19807254 MS.gene027972:CDS
CCTTGTGCTCCTTCTTCTCT+CGG 0.390186 5.2:+19807442 MS.gene027972:CDS
ATATGCTAGGTGTGGCTTTG+AGG 0.392670 5.2:+19800430 MS.gene027972:intron
CTTGCTTCTTGACCGATGTA+TGG 0.402654 5.2:+19799470 MS.gene027972:CDS
AGTCACTTGTCAACAATATA+CGG 0.418017 5.2:+19798851 MS.gene027972:CDS
AGTAGATGGGTGTCCCAGTT+TGG 0.422395 5.2:-19807268 None:intergenic
AACTGGGACACCCATCTACT+TGG 0.423800 5.2:+19807271 MS.gene027972:CDS
TGTATGGTGGAAAGTAAAAT+GGG 0.424690 5.2:+19799306 MS.gene027972:CDS
AGTCATATGTACATGTCTAT+AGG 0.425893 5.2:-19801892 None:intergenic
CTCGGACCCATCTTGTCCCT+TGG 0.432971 5.2:+19807545 MS.gene027972:CDS
CATCTCAGATACGCTTCATC+TGG 0.433284 5.2:+19807594 MS.gene027972:CDS
GATGCTAGGAGAATGAAAAC+TGG 0.435157 5.2:-19807575 None:intergenic
ACAGTGGTAGAGGAATATTT+TGG 0.442105 5.2:+19806704 MS.gene027972:CDS
TTACCGGCAGCCAAATGAAC+GGG 0.444007 5.2:-19799369 None:intergenic
GTTCATTTGGCTGCCGGTAA+AGG 0.446960 5.2:+19799372 MS.gene027972:CDS
AAAGTGCAGCCATGTGCAAC+AGG 0.447191 5.2:-19806831 None:intergenic
TTTGGTATGCAGTTCTGAAT+CGG 0.453599 5.2:+19806722 MS.gene027972:CDS
ACTTTCCCTAGCATAAAATT+CGG 0.458277 5.2:+19800576 MS.gene027972:CDS
AGTTTATAACAAAGAAAGAT+AGG 0.459538 5.2:+19799223 MS.gene027972:CDS
CTGATGACGCAGAACACAAA+TGG 0.466365 5.2:+19799339 MS.gene027972:CDS
TATTCCTCTACCACTGTTGT+CGG 0.468474 5.2:-19806698 None:intergenic
CTCCCCGTTCATTTGGCTGC+CGG 0.468543 5.2:+19799366 MS.gene027972:CDS
TGGTGAAAGCCGCTGAGAAA+TGG 0.469990 5.2:+19807153 MS.gene027972:CDS
TCTCTCGGTCTGCTCCATGA+TGG 0.470806 5.2:+19807457 MS.gene027972:CDS
TGGAGCAGACCGAGAGAAGA+AGG 0.474060 5.2:-19807451 None:intergenic
AACTAAGACAGAGAATTTGC+TGG 0.476925 5.2:-19800532 None:intergenic
CCAGTTTGGTTGTTTCCACC+CGG 0.477245 5.2:-19807254 None:intergenic
GGATTAGAGAAGGAGATGAT+TGG 0.481955 5.2:+19806781 MS.gene027972:CDS
AAGAATTTGAAGACGACTAT+GGG 0.484117 5.2:+19801826 MS.gene027972:CDS
AATAGATATAGTAAAGTGTA+TGG 0.487770 5.2:+19799290 MS.gene027972:CDS
GAAAATTCGAAGCAAGTATG+AGG 0.492860 5.2:-19801944 None:intergenic
CTTCACATTGCAGTAAATGC+TGG 0.497183 5.2:+19799156 MS.gene027972:CDS
CTTTCATTGTGTCAGGAACA+AGG 0.497530 5.2:+19806479 MS.gene027972:intron
CTTGACCGATGTATGGCGGC+TGG 0.505004 5.2:+19799477 MS.gene027972:CDS
AAATACAAAGAGAAATTCAA+TGG 0.506830 5.2:+19806899 MS.gene027972:CDS
AGGCCGAGTACTAATTTGTA+AGG 0.508118 5.2:-19807422 None:intergenic
AACACTACCAAGGGACAAGA+TGG 0.514768 5.2:-19807552 None:intergenic
CATTGAAAGCCATGAAGAGC+TGG 0.517193 5.2:+19807133 MS.gene027972:CDS
CATTGAGAAAATATATGAGT+TGG 0.517538 5.2:-19806759 None:intergenic
GGTGTTGACCAACGTTTCAC+AGG 0.517748 5.2:-19801915 None:intergenic
CTGCTGCAAACATGATAGTA+AGG 0.528837 5.2:-19807220 None:intergenic
GTGAATCACATCCGCTCTAA+GGG 0.530493 5.2:+19807515 MS.gene027972:CDS
TTGAATTAGCCAAAGATGCA+TGG 0.540504 5.2:+19798828 MS.gene027972:CDS
CATTGCGAAGTATATGCAAT+CGG 0.543536 5.2:+19801863 MS.gene027972:CDS
GTTTCCACCCGGAATAGTAA+AGG 0.543688 5.2:-19807243 None:intergenic
GTCACCGACAACAGTGGTAG+AGG 0.544166 5.2:+19806694 MS.gene027972:CDS
TATTCCCATAAGTTCATAAG+TGG 0.545496 5.2:-19806524 None:intergenic
TTGCATATACTTCGCAATGT+CGG 0.546024 5.2:-19801859 None:intergenic
CGGGTGGAAACAACCAAACT+GGG 0.546270 5.2:+19807255 MS.gene027972:CDS
CTATTTAATGAAGCCGCATA+CGG 0.549799 5.2:+19800477 MS.gene027972:CDS
CCGAGAGAAGAAGGAGCACA+AGG 0.552115 5.2:-19807442 None:intergenic
CTCAGATACGCTTCATCTGG+AGG 0.552778 5.2:+19807597 MS.gene027972:CDS
CCTGCAAAATGTGGAAATGT+TGG 0.558645 5.2:+19799182 MS.gene027972:CDS
CAACAACGAAGATCGATTTG+AGG 0.559148 5.2:+19800506 MS.gene027972:CDS
ATTCTGCCTATAAAGCTACT+AGG 0.560383 5.2:+19801969 MS.gene027972:CDS
ATGCTGTATGCAGCCCAGAA+TGG 0.567786 5.2:+19806619 MS.gene027972:CDS
GAAATCAATGTAGGCAGTGG+AGG 0.567978 5.2:+19807046 MS.gene027972:intron
TTGCCTTACAAATTAGTACT+CGG 0.568242 5.2:+19807419 MS.gene027972:CDS
GGATGGTAAGAAGCCATATG+AGG 0.571500 5.2:+19807106 MS.gene027972:CDS
TCTAATCGCGTTGGCAGATG+GGG 0.571572 5.2:+19806865 MS.gene027972:CDS
AAGCAGCGTCCTAGCTGAAG+TGG 0.573132 5.2:-19799136 None:intergenic
AGATATAGTAAAGTGTATGG+TGG 0.580221 5.2:+19799293 MS.gene027972:CDS
TGCTGGAAACCTGCAAAATG+TGG 0.584189 5.2:+19799173 MS.gene027972:CDS
TAGCATAAAATTCGGACGTG+TGG 0.586378 5.2:+19800584 MS.gene027972:CDS
GTTCCTTCCTCTAATCGCGT+TGG 0.591205 5.2:+19806856 MS.gene027972:CDS
ATTTGTAAGGCAAGACCTTG+AGG 0.592413 5.2:-19807409 None:intergenic
CATGTTTCTCTTAGCAGATG+CGG 0.593931 5.2:+19807310 MS.gene027972:CDS
ATTCTGGGCTGCATACAGCA+TGG 0.599676 5.2:-19806617 None:intergenic
ATTCGAAGCAAGTATGAGGA+AGG 0.599942 5.2:-19801940 None:intergenic
GAAGCAAGTATGAGGAAGGT+AGG 0.600005 5.2:-19801936 None:intergenic
TAACGAGCTATTCAAGATGG+TGG 0.606013 5.2:+19799053 MS.gene027972:CDS
TTTCATTGTGTCAGGAACAA+GGG 0.606341 5.2:+19806480 MS.gene027972:intron
CATATTATTCAACTATCATG+CGG 0.606924 5.2:+19798776 MS.gene027972:CDS
CAGCATGGCTTCATGTGCTG+AGG 0.607585 5.2:-19806602 None:intergenic
ACATAACGAGCTATTCAAGA+TGG 0.607707 5.2:+19799050 MS.gene027972:CDS
CTGCCAACGCGATTAGAGGA+AGG 0.609563 5.2:-19806859 None:intergenic
CTTCATTAAATAGATCATCT+GGG 0.616198 5.2:-19800467 None:intergenic
ATATAACCTCCACTTCAGCT+AGG 0.619476 5.2:+19799127 MS.gene027972:CDS
TTTACCGGCAGCCAAATGAA+CGG 0.622906 5.2:-19799370 None:intergenic
GCTTCTTGACCGATGTATGG+CGG 0.623108 5.2:+19799473 MS.gene027972:CDS
TGAAGCGTATCTGAGATGCT+AGG 0.626094 5.2:-19807589 None:intergenic
ATCTAGCTGTTACATAGCTG+TGG 0.626520 5.2:+19807187 MS.gene027972:CDS
ATACTCCAGCCGCCATACAT+CGG 0.628248 5.2:-19799482 None:intergenic
TGAAAACTGGAACACTACCA+AGG 0.630318 5.2:-19807562 None:intergenic
CTATTCAAGATGGTGGAGAG+AGG 0.633545 5.2:+19799060 MS.gene027972:CDS
ACACTACCAAGGGACAAGAT+GGG 0.634544 5.2:-19807551 None:intergenic
GAAAACTGGAACACTACCAA+GGG 0.638165 5.2:-19807561 None:intergenic
TGATAATAACCTGTTGCACA+TGG 0.638237 5.2:+19806822 MS.gene027972:CDS
CAGCGTCCTAGCTGAAGTGG+AGG 0.646016 5.2:-19799133 None:intergenic
ATATGACTCCTGTGAAACGT+TGG 0.655522 5.2:+19801907 MS.gene027972:CDS
TCGGTGACTGACAGTAGATG+AGG 0.658644 5.2:-19806679 None:intergenic
AACTTTGATCAAGTGCAACA+AGG 0.659158 5.2:+19798890 MS.gene027972:CDS
GTATGGTGGAAAGTAAAATG+GGG 0.659563 5.2:+19799307 MS.gene027972:CDS
ATAACAAAGAAAGATAGGCA+TGG 0.659570 5.2:+19799228 MS.gene027972:CDS
CTGTCAGTCACCGACAACAG+TGG 0.668199 5.2:+19806688 MS.gene027972:CDS
CTATGCAATAGATTTCCTCA+AGG 0.668242 5.2:+19807394 MS.gene027972:CDS
TATGGTGGAAAGTAAAATGG+GGG 0.669153 5.2:+19799308 MS.gene027972:CDS
GCAGCCTTTACTATTCCGGG+TGG 0.673934 5.2:+19807239 MS.gene027972:CDS
TACCGGCAGCCAAATGAACG+GGG 0.683425 5.2:-19799368 None:intergenic
AGTTGTGCATCCCATGTGCA+AGG 0.686942 5.2:+19807070 MS.gene027972:CDS
CGAGAACGAATCCCTTAGAG+CGG 0.698529 5.2:-19807526 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.2 gene 19798755 19807661 19798755 ID=MS.gene027972
chr5.2 mRNA 19798755 19807661 19798755 ID=MS.gene027972.t1;Parent=MS.gene027972
chr5.2 exon 19798755 19798911 19798755 ID=MS.gene027972.t1.exon1;Parent=MS.gene027972.t1
chr5.2 CDS 19798755 19798911 19798755 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19799025 19799507 19799025 ID=MS.gene027972.t1.exon2;Parent=MS.gene027972.t1
chr5.2 CDS 19799025 19799507 19799025 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19800439 19800624 19800439 ID=MS.gene027972.t1.exon3;Parent=MS.gene027972.t1
chr5.2 CDS 19800439 19800624 19800439 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19801814 19801990 19801814 ID=MS.gene027972.t1.exon4;Parent=MS.gene027972.t1
chr5.2 CDS 19801814 19801990 19801814 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19802107 19802169 19802107 ID=MS.gene027972.t1.exon5;Parent=MS.gene027972.t1
chr5.2 CDS 19802107 19802169 19802107 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19806494 19806927 19806494 ID=MS.gene027972.t1.exon6;Parent=MS.gene027972.t1
chr5.2 CDS 19806494 19806927 19806494 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
chr5.2 exon 19807059 19807661 19807059 ID=MS.gene027972.t1.exon7;Parent=MS.gene027972.t1
chr5.2 CDS 19807059 19807661 19807059 ID=cds.MS.gene027972.t1;Parent=MS.gene027972.t1
Gene Sequence

>MS.gene027972

ATGAAGAATGCAAAAGCTTTGCATATTATTCAACTATCATGCGGACGACAGATTCAGGATGAGCTTTGTCATTTTGAATTAGCCAAAGATGCATGGAGTCACTTGTCAACAATATACGGCAAAAATTTTGAAATCAACTTTGATCAAGTGCAACAAGGTACGTATTGAAATGTAATTGCTATAATCTAGAGAGAACATAAACACTGCGAGCTGCAATGATTTTCCCTCCAAGATAATATTTATGGATGCATGTATAAACTTAAATGGCAGATGATGATGATCTAGTTAGTGTGAAACATAACGAGCTATTCAAGATGGTGGAGAGAGGTGATTCTATTGAAGATGTCAAAATATATCAGGATGTATATGATGATATAACCTCCACTTCAGCTAGGACGCTGCTTCACATTGCAGTAAATGCTGGAAACCTGCAAAATGTGGAAATGTTGGTGAGAGAAGCGAGCGACGAGTTTATAACAAAGAAAGATAGGCATGGTGACACAGCTCTTGCTCTTGCAGCTTGTTATAACGCAAAAATAGATATAGTAAAGTGTATGGTGGAAAGTAAAATGGGGGAGATGCTGCTGATGACGCAGAACACAAATGGAGAACTCCCCGTTCATTTGGCTGCCGGTAAAGGACATAAAGAAATGACTAGTTATCTTTACTCCAAAACTTCTGGAGAAGTGTTCAAGAAAAACTCACAAAAACGAGTCTTGCTTCTTGACCGATGTATGGCGGCTGGAGTATTTGGTAAGCATATTTAAGAGTTATCTTTTTTATTAATTACACAGAGGGCCTAAGCTTAATTAAGCCCAAGATTTAAGGGTGAGGTCTACGTTACCTTTTGATGAATAAGAAGTAATTTACCCCTAATGACAAATAAGATTATATCTAACTATTTATTGCAAAAAGAAAAAATAAGTGTAATGAAATTAAAAGGGGTTGGCTTTTAAAAATATCCCAATTTGGTAACTACAAAGTGCAAAGACAATGATATGCAGGGATTGGAGTTAAAACTTCAGTTTTTTTCACTTCTCAACACTTAAAGTGTGTGAATCAGGCTACTTAACACAAAAATAAATAAATTAAAAGGCCGTGAAGTCATTTAAATAATAAATGCATCTAAATATTTACAATTTGTTCTTATATTTGAAAATAATATTAAACAATTTCTTATATAGAGAAAATTACTTTTTAATTAAAATGATTTTTTTTATTAGAATGGGTAAAACAATCATTAAAAAACAAGTAATAGAAAAATGGGTAGTGTTAACTTGTGTCCTTAGGGCACATGTTAAGAAACCTAAAATAAATATTGTCTAAAATTTTGTACATTTAAATGATTAAAAAGTTAAATATTAAATGCAATGCACACATTTCAATAAGTTTTTTCTATATTTGAATCATTAACTTGTGCGCACAAGTTAACATTTCCCTAGAAAAATATATACTCTCTCTGATCCTATTTACAAGAGACAATTTACTTTTTAGATACATTAAATAATTTATGTATTTCGTTTAGGTTCTTGACTAGATACATACATTATTCAATGTATCTAAAAAGTCAACTTTCTCTTGTAAATAGGACCGGAGGGAGTTGATTAAATCCTTTTTGGCTAATGTGTAAGAATATAAGATTAAATTAATTTTTAACTTTTCAAATATGTGGTTGATATGCTAGGTGTGGCTTTGAGGTTACTCATGCTTTACCCAGATGATCTATTTAATGAAGCCGCATACGGTAAAATCAACAACGAAGATCGATTTGAGGACTCCAGCAAATTCTCTGTCTTAGTTTCATTGGTTAAATTGCAACCCACTTTCCCTAGCATAAAATTCGGACGTGTGGAATGCTTCATTTACGACTGTAAGTTTCCCAAATTTGACTTAATCGATATAATAACCATACTAATGATCCTCTCCATTTCCCAAAATAAATAAAGGACGTCATTTAAAAAAAGATAGAAACAAAATACACCCTCCGATCACTATTATAAGCAAAAATCAACTTTTTATGTTCATTCAATAAATGATGTATGTGGTCTTTATAATGACTACTTGCATTATTTATTGAAGGGGAATTAGTCACTTTAGTCCCTGAATGGGAGAGGATTCGTCACTTTAGTCCCTGAATGAAGAGAAATTGCAAAACAGTCCCTGCATGGTCAATTTCAGGGACTAAAGTGACTAACGGAGTCTACATTCAGGGACTAAATTGACTAACGAAGTTTGCATTCAGGGACTAAATTGACTAACAAAGTCTACATTCAGGGACTATTTTGCAATTTATCTGCATTCAGGGACTAAAGTGACGAATCCCTTCCGATTCAGGGACTAAAGTGACTAATTCCCCTTTATTGAATGAACCTAAATAATGGATTTTTACTTATAATTGTGACCGGAGGGTGTACTAGATAATACTCCATCCGTTTCAAAATGAGTGTCGTTTTAGTCAAAAAAAATTGTTTCAAAATGAATGTCGCTTTCAGTTTCCAATACAATAATAGCTTTTTTTTTTTTCAATTGTACCCTTCAATTAATACTATATTACACTACTTCCAAAGTATTATTTTTTCTTTAATGTAAAACAAATCAATAGTTGATTAGGATACTTTGGTAAAATTACTATGACATTTAATTACTTTATTTTATTCCTTAATATGTTTGCAATTGACTAAAGCGACACTCATTTTGAAACAGACGGAGTAGGTCATGCCACTAAGTGAGTCCCATAGCTATTATTTATTTTATATTTTTCAAATTTCTTTCTGTGGTTGCCCTTTGGTTCTTTGTGTGTCTTCTTTTAATTGGCTTGACTATTTCAACACACAATCTTGACCTAGGTAGCGCAGCTAAAATAAAAAATTATTTAAAAATTATGTTGCCTGCTCGAGAATTAATTCTATGGCAGACTCGAGGATCTAACTCATCTAAACCCCGAGAATACTTTAACACTTATTGGGGAATGGGAACTATGATCCTAATTACCGTGGATTTGTGAGAAGAATGAAAAAAATAGTACTGATATATGAAATTACGAAAACTGTTTTTTTTAGGTTTAAGCCTAAAAGAATTTGAAGACGACTATGGGATTCCCGAATCCGACATTGCGAAGTATATGCAATCGGTTTTTGCCTATAGACATGTACATATGACTCCTGTGAAACGTTGGTCAACACCTACCTTCCTCATACTTGCTTCGAATTTTCTGATTCTGCCTATAAAGCTACTAGGTATGTTGGTTCCATTCCCTTTACAAATTATCGAATTTCCTATTAGTTACTAGCCTTACTATACTGATGATTCATTTATTTTCCTTACCTTTTCGATGATTTGTTGATTTCTTCAGGTCGACTGCGTCGTGAACTTGCATGCTTGTTAGTTCAACTTTTCAAGTATCTAAATATCTTGGGTAAGTAAAAACCAGGTCGACAATATATTTAGTTTAAATTTAAGTTTGTATACATGTGGGTCTAATGGGTGTCGCTAATTAAGTTGAATAACAACATTGAACTTGCGGGGGAGGAAAACATTTCAATAACCACTAAACACATAATTGGAAGAGGTGCAAGCACCCAAGCTGAATCGTGCCTTGAAGTAGGTGACTATTATGCAATATATTTATTTTTTGAACTCAACAATATCCTTCTTAATTTTATTGCAATTCTTTTTGTTTTTTAACGGCAAAATTTATCAATAATCAAATTTCTGCATAAGACGAATAGAGATCGGAAGACAAACTATAAATAAGTGTCGATATAGGCGGAACACCCAAAAGAAAACCATAACAAAACCACCAACACCAATAAGAAATCTGACTACCAAAATCAAACTCGACACCTAACTCAAAGTTTAACCTCCACACTTCCCCTCGAGTGACCACACAAACAAAATTCAATCACCTATCGCCTACATCTTGCTCGCTATAATCCCTTCAACCGATTAAACCCCCTGAAAACAACAATTCAACTTCTCATCACCATGACTGAGCTCAATTAAACACCCAAAGAATTACTTATTCCAACACTTCTTCGGATTCCACCACACCTCGACTCCCGATACGTAGGAGAAGACACCAATAACACGCCCAAAAACTTGAGTCAAGAGAACTGACTTATGATCTCAAATCAAAAGTAATGGTCCACTAGACTCCAGAAACAAATCACTAAGTCACCCCTCAACCCGATCCACCAAAGAAAACACCAAAACAAGTTAGAAAATTAGGAACTAGACACTAACTCCCGATCTCAAATCAAAAGCAATCTGCCTACTAGAATCCAAGAAACAAATCCCTAAAGCAGTCGATATGTGGAGTAGTAGCACAAACAAAGGAGATCGGAAGAAAAAAGCCAATTGAAGACCAAAAATCGGAGCAAATTAGCGGCATTGAAGATAGACTCATATCTTTTAGCACCCTTCAACCACCCATTAATTAAAGTCACTCCCTCAACCCCAATCTTCACCCTTATGCTACCCTAAAGCAAGATCACTTTGTATGGAGACCGCGAAATACATCGGAAGCAAAACACCCACCGAAACTAGCCACCACCAAACACTAAACTTGCACCGGAAGCTTATCATCCATGTAGAACTCCTATTGCAAAGCTCAAAAGGAAGTTGCTACAACCTGGTTTTATTCCTTGAGCAACTTGGTTTCCTTGACCGTGAGCTCCTACTAGACGCACAACACAACCAATTTGAAGAAAAGTAAATAAATAAATAAAAAGAAAATGAATATGAGCAACATTAACAACACGAACAACATAAACATCACAAACAACACTAGCACAACATCAAAGAGCTGACAACACCCAAAGAGGAGGTGGCGCAAAACAATGAAGACGATTAAGAGATGGGTCTTCATTATACATATGCCAACTATCGTGCATTAGTTCGTTAAAGCTTGGTTCAAATTTCCATGCATTTTGGACACTGAAGCTACGATGGGTACACTGTTTCCTAAAAACTAGGTTACTATTAAGCAAGATCTGGTAAAGATTCGAAGCTGGGGAAATTAGATTATCAAGAGTTGCACTAGGAAAAATATTGAACCAAGCATTATGTTGTGAAAGTGACTTAAAATTGGAGTTTTGAATCTGTTAAAATCGGAGCCCGAATGGTGCTATCCGGGGCCCAAATTTGGCTGTTGTTTTTCAGCCTGTTGGGACGTGAAAATTCGGTGGCCGAATGGAGGAATTCGGGGACCGAATTTGCCAGCAGAAAATATAACAAAATCATATTTTTGGCCTGAGATTTGTTCCAATTTTATGAGAGATACTTTAACTATAAATATAGACTTTGTATCAGAGTAAACCTTGAGATAGAGGGGGCTGAAAACAAGGGTTTAGAAACAAACAACAAACTAGGGTTTGTATAGAGTTTGCTCTTGGCAACAAACATTAGGGTTGGCGTTGATTCACCTTTGGAAACACTATTAGGATTGAGTCTCTTGGTCACGTGAAGAGATTGAGACTTTGGGTAGAATTAGGCATGAGACTTATTCTTGTAACCCATTGATATCTCTTTTGTAAAGTTACTTATCATTATAGTGGAACGGAGAGCTGCTCTCTCCCCCATACTAGCTCAGTATTGGACCGAACTGGGTAAATAAATTTCGTGTGTTCTCTCTTTCTTTTCTCTCGCTGTTTTTCTACTTTTGGCTTGTGTTTATAACTTCCATACACTTTGTTTGGTTGCTTGATTATTACTTACTCCACACATCAAGTATTTTATTGGTGTGATTTTTCATCGAAATCACAACACCTTATTTTCTATATTCCTATCAAGTCTTTCTTCAACTGCACGTGGGGTACCCAAAATTTTAAGATCCCCATCGAGTGAGACCATTTAGGGCTTTTTCAGAATTCGATCTTGTAGCCTGTTGTGAGAACTTACCCATACCACTACCAACATTATGATACTATTATCTACAAGGAATAGGATCATGTAGATATATGTTAGTAGGAGCCGTTCCAATGCGGCGAAAAATATGGTGTAGTGTCTTCTCCCATTCTTTAGTACCATCATCATTCTCAAGCTCAAAGTTTTGAACAACCTTTATCATATTACCTAGCAATCCACATATATAGCAAAACACACCTATCCTTTCGTACATAAACTAACAATTGTAACAAAGCGGCCATCATTTTTTCGTATCTGTTATTCTTTTTCTAAAGGAGCTGTAATATCAATGCGGACCTTCAGCCTCATATAAGAATGTGCACCATGTTTCTATGATCGTGTTCCTTCAAATCGTCAAGTAACTATTCAATTACATGCCATACCCTTGGTTGAATGAAGGCAAAAGGCAAATGATGGACTTGAACCAATATGTCAAGATGATTCAAATCCACACTTGTAGGAACAATACCAGGAGCAATATGCTCCGCCCTAAGGTTGTCATTATCGTGTAACCATGGGCCTTCATCAACAACTTTGGCAGCAACGAGACGATGGTGAAATTGAAACATAAATCAACCTTCCTAAACCTAAAGGAAGGAGACTTTCTTTCCCTGCTTCCATATATGACTTAATCTCTCCTGGAAGTAAGTAGCCTTAATTTGTTTGTATTTTATCTTGCAACCAATAAGACAATGGTCAAGGATTTGGATATCAGCAGAAGCAGTTTCCATATCTAGGGTTAGCCCCTCATCTGACAGTGTTAAGCTTTCGAGGTTCATATCAAAAGCAACCATGGATGCGATGATGATGATCAGGTTGGACATAAATAGTATGGTGAGGGAGAAAAGCAAATTGTATCACATGAAAGTATACTAGCAAGGTTAAGGTTTGTGGTTGTTGTGAAGAGTTACCATGAAGGATGATTTATATAGGCTCGAAAGGATGTATCTAGGTTGTTTTAGTACACCATATGATTGCAAAACACTCATAAGGGTTGGTATACAACAACCCAAATTGGCGGCGGCCCAAAAACCCAGGAAGGAAGCACACACCAAAACCCTAGGAGAGAAATTTTTTATTCAAAAACAGTTTATCTTATAACAAACAATTGTTAGTTCCTTCAAAATTAAAAACATCAATTGTTATATTTTTTTATCAAAAACTATTGTTAGTTACTCTCTCCCTCCAACAAATTTCTATTTCTTTTTTTTTTTTTTAAAGAAAATTCCTATTTTTTTACACTCTATCTTTCTCCTCATTCTTTTTATTCCAATGAGTCTTTCACTCTTTTTCTTTTTAAATATGCAAGAAGTTCTCTATTTTTTTCCATAAGAATTATTTTTCTATTTTGCACTTGAAATTTTTGATAATACCAATGATCTTATTTAAAAAATTTAAACTCTTCATGAACCATTTTATAGGTAACGATATTTTGTGTCATTGAAGTAAGATTTGCGCATAACAAAAAAAACTTTGTGTTTAAAAAAAAAAAACTTAAATTTTACAAATGTATTACATTAATTTGTTTTATTGAAAAAGAGTAAGATTGAGAAATGATATAATTAACAAATTGTATCATTAAACTATGAAAACGATAGTTAAATAGAAACACAAAATTTGTATTCAAATGACACTTGAAAAGTAACAACAAATAAATGATTTTAATTAATGTCAACTTAACATAGTAAATCTAGCACATTTTGTTGATGAATAATGTTGTCACCTTCATTTTTTGGCCGCCAGAGTCAAATATTCATTTCCACATAACTTTTCTGCTAATTTAATTTGATTTTCTGCAACGATTCATGTACTTATATGTCCTTTCATTGTGTCAGGAACAAGGGAAATTTATGATATAAAATATACCACTTATGAACTTATGGGAATATTGAAATACTTAATCCAAAACATTAAAGGGTTTAATGGTTTAGGGCTTAGACAAGCCTCAGCACATGAAGCCATGCTGTATGCAGCCCAGAATGGAAAAACTTCATTCATAAATGCTATGACTGAAGCTAATCCTCATCTACTGTCAGTCACCGACAACAGTGGTAGAGGAATATTTTGGTATGCAGTTCTGAATCGGAACGCATATGTGTTCCAACTCATATATTTTCTCAATGGATTAGAGAAGGAGATGATTGGATATCGCACAGAAACGTTTGATAATAACCTGTTGCACATGGCTGCACTTTCAGTTCCTTCCTCTAATCGCGTTGGCAGATGGGGTCCTGTTATGCAAATACAAAGAGAAATTCAATGGTTTAAGGTCATTTGGCTCATCTTTCTCTATCTATCTATCTACGTCTTTCTCTCAATCTACTATATTTTAAGATAACAAATTGTTTTCTTCGTGAATAGTATTATTTTTAAGATTAAGATTGTTTGAAATCAATGTAGGCAGTGGAGGAAGTTGTGCATCCCATGTGCAAGGATGCAAAAAATGAGGATGGTAAGAAGCCATATGAGGTATTCATTGAAAGCCATGAAGAGCTGGTGAAAGCCGCTGAGAAATGGATAAAAGACACATCTAGCTGTTACATAGCTGTGGCTTCTCTCGTCCTTACTATCATGTTTGCAGCAGCCTTTACTATTCCGGGTGGAAACAACCAAACTGGGACACCCATCTACTTGGATCAAAATATATTTAACATGTTTCTCTTAGCAGATGCGGTGTCTATAATCACTTCCGCTACTTCAGTCTTGTTTTTCATTAGCATTCTCACATCGCGTTGCTATGCAATAGATTTCCTCAAGGTCTTGCCTTACAAATTAGTACTCGGCCTTGTGCTCCTTCTTCTCTCGGTCTGCTCCATGATGGTTGCTTTTTATGCTGCGCTTAACATGATCTTAAAGGTGAATCACATCCGCTCTAAGGGATTCGTTCTCGGACCCATCTTGTCCCTTGGTAGTGTTCCAGTTTTCATTCTCCTAGCATCTCAGATACGCTTCATCTGGAGGATTTTATATTGTACAATAAAAAATCGCATTAGTTCTATTTGA
Protein sequence

>MS.gene027972.t1

MKNAKALHIIQLSCGRQIQDELCHFELAKDAWSHLSTIYGKNFEINFDQVQQDDDDLVSVKHNELFKMVERGDSIEDVKIYQDVYDDITSTSARTLLHIAVNAGNLQNVEMLVREASDEFITKKDRHGDTALALAACYNAKIDIVKCMVESKMGEMLLMTQNTNGELPVHLAAGKGHKEMTSYLYSKTSGEVFKKNSQKRVLLLDRCMAAGVFGVALRLLMLYPDDLFNEAAYGKINNEDRFEDSSKFSVLVSLVKLQPTFPSIKFGRVECFIYDCLSLKEFEDDYGIPESDIAKYMQSVFAYRHVHMTPVKRWSTPTFLILASNFLILPIKLLGRLRRELACLLVQLFKYLNILGTREIYDIKYTTYELMGILKYLIQNIKGFNGLGLRQASAHEAMLYAAQNGKTSFINAMTEANPHLLSVTDNSGRGIFWYAVLNRNAYVFQLIYFLNGLEKEMIGYRTETFDNNLLHMAALSVPSSNRVGRWGPVMQIQREIQWFKAVEEVVHPMCKDAKNEDGKKPYEVFIESHEELVKAAEKWIKDTSSCYIAVASLVLTIMFAAAFTIPGGNNQTGTPIYLDQNIFNMFLLADAVSIITSATSVLFFISILTSRCYAIDFLKVLPYKLVLGLVLLLLSVCSMMVAFYAALNMILKVNHIRSKGFVLGPILSLGSVPVFILLASQIRFIWRILYCTIKNRISSI