AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027978

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027978.t1 MTR_5g028450 69.580 286 52 2 542 792 1 286 1.10e-129 390
MS.gene027978.t1 MTR_5g028510 63.354 322 103 5 77 394 25 335 4.54e-123 374
MS.gene027978.t1 MTR_5g028190 56.725 342 112 3 484 792 185 523 1.53e-118 370
MS.gene027978.t1 MTR_5g028190 47.907 215 89 3 171 385 5 196 1.29e-50 187
MS.gene027978.t1 MTR_5g028130 51.662 331 117 4 501 792 1 327 3.07e-100 315
MS.gene027978.t1 MTR_5g028930 48.974 341 136 3 489 792 268 607 9.68e-91 299
MS.gene027978.t1 MTR_5g028930 42.812 313 135 10 89 389 1 281 1.61e-48 182
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 18 284 3.32e-51 183
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 81 347 1.37e-50 183
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 133 399 4.56e-50 183
MS.gene027978.t1 MTR_5g028830 42.414 290 120 8 357 642 42 288 5.82e-50 178
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 161 427 5.98e-50 184
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 159 425 8.07e-50 183
MS.gene027978.t1 MTR_3g055310 37.175 269 166 2 504 771 186 452 1.26e-49 183
MS.gene027978.t1 MTR_2g438740 42.797 236 135 0 545 780 279 514 3.39e-49 184
MS.gene027978.t1 MTR_5g028690 48.168 191 63 1 638 792 36 226 1.35e-48 172
MS.gene027978.t1 MTR_5g091220 39.568 278 159 4 498 771 268 540 2.32e-48 182
MS.gene027978.t1 MTR_2g438440 39.676 247 148 1 542 788 396 641 9.35e-44 169
MS.gene027978.t1 MTR_2g438400 37.247 247 154 1 542 788 255 500 4.13e-42 162
MS.gene027978.t1 MTR_3g455790 34.643 280 180 2 493 771 258 535 1.43e-41 161
MS.gene027978.t1 MTR_5g028110 47.486 179 45 2 645 792 4 164 1.59e-41 150
MS.gene027978.t1 MTR_2g438760 37.247 247 152 1 543 786 271 517 1.65e-41 161
MS.gene027978.t1 MTR_2g438720 38.306 248 151 2 542 788 401 647 1.70e-41 163
MS.gene027978.t1 MTR_6g017215 58.915 129 53 0 643 771 6 134 4.33e-41 151
MS.gene027978.t1 MTR_2g438700 37.903 248 152 2 542 788 399 645 6.22e-41 161
MS.gene027978.t1 MTR_2g020450 27.258 631 372 18 176 768 36 617 5.12e-40 158
MS.gene027978.t1 MTR_2g438640 38.865 229 139 1 542 770 401 628 6.30e-40 158
MS.gene027978.t1 MTR_3g452020 34.426 244 157 2 504 746 94 335 4.13e-37 145
MS.gene027978.t1 MTR_3g452020 34.426 244 157 2 504 746 270 511 3.06e-36 145
MS.gene027978.t1 MTR_5g028900 55.118 127 45 2 644 770 3 117 7.34e-36 133
MS.gene027978.t1 MTR_2g438640 37.118 229 117 2 542 770 401 602 3.77e-35 143
MS.gene027978.t1 MTR_2g020510 34.848 264 162 2 542 796 390 652 7.24e-35 142
MS.gene027978.t1 MTR_5g028840 49.612 129 65 0 643 771 2 130 2.63e-34 130
MS.gene027978.t1 MTR_3g058570 35.319 235 142 3 541 768 83 314 1.20e-32 131
MS.gene027978.t1 MTR_5g028920 45.963 161 83 2 486 645 70 227 5.16e-31 122
MS.gene027978.t1 MTR_3g050500 31.765 255 161 6 541 788 427 675 3.93e-28 121
MS.gene027978.t1 MTR_5g085350 33.603 247 159 3 543 785 425 670 1.43e-27 119
MS.gene027978.t1 MTR_5g085350 33.603 247 159 3 543 785 438 683 1.60e-27 119
MS.gene027978.t1 MTR_2g020470 24.578 651 378 22 176 785 36 614 2.64e-27 119
MS.gene027978.t1 MTR_2g017930 36.154 260 159 4 529 788 347 599 3.30e-27 118
MS.gene027978.t1 MTR_5g085340 32.000 250 163 3 542 785 443 691 2.41e-26 116
MS.gene027978.t1 MTR_3g051060 28.740 254 177 3 535 785 427 679 6.69e-24 108
MS.gene027978.t1 MTR_2g438640 43.750 128 71 1 643 770 399 525 9.29e-24 107
MS.gene027978.t1 MTR_5g085360 28.777 278 158 6 540 780 403 677 7.17e-23 105
MS.gene027978.t1 MTR_1g113820 31.132 212 144 2 541 752 275 484 1.49e-22 103
MS.gene027978.t1 MTR_2g438470 39.850 133 79 1 587 719 366 497 1.01e-19 94.0
MS.gene027978.t1 MTR_1g113760 28.959 221 154 3 541 759 239 458 5.41e-16 82.4
MS.gene027978.t1 MTR_1g113730 26.415 212 154 2 541 752 45 254 7.67e-13 71.2
MS.gene027978.t1 MTR_2g438580 40.964 83 48 1 657 739 2 83 8.49e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027978.t1 AT3G18670 43.478 299 164 3 501 795 252 549 7.41e-71 245
MS.gene027978.t1 AT3G18670 26.540 211 135 5 154 354 52 252 1.46e-13 75.1
MS.gene027978.t1 AT3G18670 41.562 320 174 4 480 795 294 604 7.75e-71 246
MS.gene027978.t1 AT3G18670 27.686 242 131 6 154 385 52 259 1.25e-17 88.2
MS.gene027978.t1 AT5G04730 39.159 309 172 6 500 797 254 557 2.39e-53 196
MS.gene027978.t1 AT5G04680 29.442 591 304 17 217 788 140 636 4.31e-52 194
MS.gene027978.t1 AT5G35810 43.265 245 133 3 542 780 35 279 8.49e-52 185
MS.gene027978.t1 AT5G04700 43.600 250 139 2 541 788 362 611 5.52e-50 187
MS.gene027978.t1 AT5G04690 36.424 302 172 5 473 770 266 551 1.12e-47 180
MS.gene027978.t1 AT5G04690 38.768 276 159 4 499 770 302 571 1.73e-47 180
MS.gene027978.t1 AT5G04690 38.828 273 163 3 499 770 316 585 1.99e-47 180
MS.gene027978.t1 AT5G04680 40.664 241 132 3 541 770 226 466 3.34e-43 165
MS.gene027978.t1 AT5G04680 39.382 259 146 3 541 788 335 593 9.23e-43 166
MS.gene027978.t1 AT5G04680 39.382 259 146 3 541 788 349 607 1.18e-42 166
MS.gene027978.t1 AT3G54065 48.993 149 70 1 629 771 8 156 7.25e-40 147
MS.gene027978.t1 AT5G04700 37.143 105 65 1 541 644 362 466 5.24e-11 66.2

Find 164 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCACCTGGCAGCACATT+TGG 0.198170 5.2:-19685632 MS.gene027978:CDS
ATTGCTTACCAACAATATTT+AGG 0.199902 5.2:+19686315 None:intergenic
AGTTGTACATCCCAAGTTTA+AGG 0.201957 5.2:-19685233 MS.gene027978:CDS
CTTTGCTATATCAGTGTTTC+CGG 0.220236 5.2:+19699144 None:intergenic
TACGAACCTTGCTCAATATC+TGG 0.231384 5.2:+19702663 None:intergenic
TGTATCAATGCTGAAATATT+TGG 0.233744 5.2:-19698908 MS.gene027978:intron
AAGAGAAATTCAATGGTTTA+AGG 0.238103 5.2:-19685560 MS.gene027978:intron
CCGATCGGCATGGGAATATT+TGG 0.256936 5.2:-19699612 MS.gene027978:CDS
AGGATCATATGCTGCATTTC+GGG 0.260720 5.2:-19683000 MS.gene027978:CDS
TTAATATCTCCTTCCGTTCA+TGG 0.279585 5.2:+19685686 None:intergenic
TGGTTCTGCTGAGGCTTTAT+TGG 0.287883 5.2:-19702736 MS.gene027978:CDS
TATACCCATTGTGAAGTTAT+AGG 0.297422 5.2:-19685943 MS.gene027978:CDS
CTCATTAGTTGAAGCCTTGT+TGG 0.300830 5.2:+19687858 None:intergenic
CAAAACTCGATTCTGTGAAT+TGG 0.302690 5.2:+19698943 None:intergenic
TTGCAACACTTGTTACATTT+CGG 0.309741 5.2:+19686715 None:intergenic
TGATATGACAAGAAAGATAA+TGG 0.319615 5.2:+19684724 None:intergenic
TTTCATATGCTATTCTATAT+CGG 0.321309 5.2:-19685741 MS.gene027978:CDS
TAGGATCATATGCTGCATTT+CGG 0.327760 5.2:-19683001 MS.gene027978:CDS
GTTGAGAGTGGTAATTATAT+TGG 0.345676 5.2:-19699349 MS.gene027978:CDS
TGGCAACACTTGTTGCATTT+CGG 0.346489 5.2:+19686769 None:intergenic
GTAGTACCAATCATGTCATT+TGG 0.348394 5.2:-19684755 MS.gene027978:intron
TTCCCAAGTGGTACTCGGTT+TGG 0.351558 5.2:-19690898 MS.gene027978:CDS
TTGCACCTGGCAGCACATTT+GGG 0.356003 5.2:-19685631 MS.gene027978:CDS
ATTCTTCTAGCTGCCGCTAA+TGG 0.360168 5.2:-19699034 MS.gene027978:CDS
CACAGTTCCTATGTTGCTTA+GGG 0.368094 5.2:-19691004 MS.gene027978:CDS
TCACAGTTCCTATGTTGCTT+AGG 0.370657 5.2:-19691005 MS.gene027978:CDS
TCTGATTCTGATAGCAAATC+TGG 0.378054 5.2:-19685601 MS.gene027978:CDS
ATCATGTGGACAGCAGATTC+AGG 0.382139 5.2:-19699660 MS.gene027978:CDS
TTCGTTTACCTAAATATTGT+TGG 0.382974 5.2:-19686323 MS.gene027978:intron
GGTTGTGCAGGGTGGTCATT+AGG 0.383561 5.2:-19683020 MS.gene027978:CDS
TTGCCTTGGAAGTTAATGTT+AGG 0.383803 5.2:-19684881 MS.gene027978:intron
TTATATTGGAGACATCATTA+AGG 0.385585 5.2:-19699335 MS.gene027978:CDS
GGAGATATTAAGATCTTCTA+AGG 0.388498 5.2:-19685674 MS.gene027978:CDS
TAGTGAAACTTGGAGAGAAA+TGG 0.395190 5.2:-19685150 MS.gene027978:CDS
TCAACTTGAAATCGAGAATA+GGG 0.395333 5.2:-19699071 MS.gene027978:CDS
CTGTTGCTGATCTTAACATT+TGG 0.399005 5.2:-19686746 MS.gene027978:CDS
GATCTCGATTATTCCATGTT+GGG 0.409304 5.2:+19685831 None:intergenic
AACTAAGCTTGAGAATTTAT+CGG 0.411209 5.2:+19690945 None:intergenic
TTCACAACTCAAAGTGGCTT+TGG 0.415615 5.2:-19685878 MS.gene027978:CDS
AACTTTACACGAAGAAACTT+TGG 0.417460 5.2:+19686669 None:intergenic
AATGTGCTGCCAGGTGCAAC+AGG 0.418915 5.2:+19685635 None:intergenic
GATCTGCTTAAAGTTGTAGA+TGG 0.419203 5.2:-19685781 MS.gene027978:CDS
AGGAAATTCAAAGACGACTA+TGG 0.424810 5.2:-19686816 MS.gene027978:CDS
TTAGCGGCAGCTAGAAGAAT+AGG 0.427359 5.2:+19699037 None:intergenic
TAGTACCAATCATGTCATTT+GGG 0.431612 5.2:-19684754 MS.gene027978:CDS
CAAATATTCCCATGCCGATC+GGG 0.434019 5.2:+19699613 None:intergenic
GCTCTTGTTGCTCGTTATAC+CGG 0.435382 5.2:-19699163 MS.gene027978:CDS
GGTGGAAACGACGACAAAAC+TGG 0.435847 5.2:-19685046 MS.gene027978:CDS
CACAATGAGCTAGTGAAACT+TGG 0.439680 5.2:-19685160 MS.gene027978:CDS
ATTCTCAAGCTTAGTTGCAT+TGG 0.442953 5.2:-19690938 MS.gene027978:CDS
ATCAACTTGAAATCGAGAAT+AGG 0.453957 5.2:-19699072 MS.gene027978:CDS
CAGCTTTCCCAAGTGGTACT+CGG 0.455109 5.2:-19690903 MS.gene027978:CDS
CTTCACGTTGCAGTAATTGC+TGG 0.456840 5.2:-19699271 MS.gene027978:CDS
TCTACAACTTTAAGCAGATC+AGG 0.462720 5.2:+19685784 None:intergenic
TGATCTCGATTATTCCATGT+TGG 0.463370 5.2:+19685830 None:intergenic
AAAGTCTGATAATGATTCCT+TGG 0.463588 5.2:+19691032 None:intergenic
AGTGAAACTTGGAGAGAAAT+GGG 0.464174 5.2:-19685149 MS.gene027978:CDS
GGCAAACTAGATGGATTGCC+AGG 0.466634 5.2:-19699563 MS.gene027978:intron
TGTATATATAACATCTGCTT+CGG 0.467064 5.2:-19699305 MS.gene027978:CDS
CATTAAATTCTCCAACACTT+TGG 0.473130 5.2:+19685902 None:intergenic
ACGAACCTTGCTCAATATCT+GGG 0.477616 5.2:+19702664 None:intergenic
CTCAAAGTGGCTTTGGCGTA+TGG 0.477855 5.2:-19685871 MS.gene027978:CDS
AAGTTGAAAGAGAAGCCTCC+TGG 0.480593 5.2:-19699721 MS.gene027978:CDS
GTAATCGACAGGAGAGACTT+GGG 0.480926 5.2:-19683106 MS.gene027978:intron
GATATGACAAGAAAGATAAT+GGG 0.481804 5.2:+19684725 None:intergenic
TTGTCAGTGAATATTTCATA+AGG 0.484126 5.2:+19685184 None:intergenic
TATCTTTCTTGTCATATCAC+AGG 0.487858 5.2:-19684720 MS.gene027978:intron
CACATGTGTTGATCGTTCCC+TGG 0.491959 5.2:+19683077 None:intergenic
ATTTGTTCAGGTCTACTACT+TGG 0.493682 5.2:-19686386 MS.gene027978:intron
ACTAAGCTTGAGAATTTATC+GGG 0.494368 5.2:+19690946 None:intergenic
GGGAACTATTCCAACGGAGG+AGG 0.494998 5.2:+19702848 None:intergenic
TGGACAGACAGAGGTTGTGC+AGG 0.495031 5.2:-19683032 MS.gene027978:CDS
TATTCCTATAACTTCACAAT+GGG 0.495662 5.2:+19685939 None:intergenic
ATCTGATCGGGCAAGGTCTG+TGG 0.496442 5.2:-19702773 MS.gene027978:CDS
AAATGCAAAGAGAAATTCAA+TGG 0.499653 5.2:-19685567 MS.gene027978:CDS
GAATATTTGGCTGATAAATA+CGG 0.500226 5.2:-19699599 MS.gene027978:CDS
TAATTCTTTGTGTCCATTAG+CGG 0.503577 5.2:+19699021 None:intergenic
CCAAATATTCCCATGCCGAT+CGG 0.507059 5.2:+19699612 None:intergenic
TGTAATCGACAGGAGAGACT+TGG 0.507949 5.2:-19683107 MS.gene027978:intron
AGCAGCATCTTATACAATTG+TGG 0.509903 5.2:-19685116 MS.gene027978:CDS
TAAAACAGCCCGATCGGCAT+GGG 0.510308 5.2:-19699621 MS.gene027978:CDS
ATACTCCCAAATGACATGAT+TGG 0.511640 5.2:+19684749 None:intergenic
ACTTTCTCAAGAGCTTGCCT+TGG 0.512356 5.2:-19684895 MS.gene027978:CDS
AATTTCTTCTGCCAAAGTGT+TGG 0.513940 5.2:-19685913 MS.gene027978:CDS
AATGATTCCCTAAGCAACAT+AGG 0.515970 5.2:+19690997 None:intergenic
TGGAAAAGTTGGTGAAAGTA+GGG 0.517135 5.2:-19699234 MS.gene027978:CDS
TAGCGGCAGCTAGAAGAATA+GGG 0.520879 5.2:+19699038 None:intergenic
GAGAGACTTGGGGAACAACC+AGG 0.524711 5.2:-19683095 MS.gene027978:CDS
TACCATGGTCATCAAGGCTA+TGG 0.526948 5.2:+19699389 None:intergenic
TGGAAGAGAATTCTGAAGCA+TGG 0.532374 5.2:-19702716 MS.gene027978:CDS
TTTACACGAAGAAACTTTGG+TGG 0.535992 5.2:+19686672 None:intergenic
ACGAGTGTTCCCTCCTCCGT+TGG 0.536069 5.2:-19702858 MS.gene027978:CDS
AAATAAGTGGTCTAACTCCC+AGG 0.538495 5.2:-19699107 MS.gene027978:CDS
GTGGAAAAGTTGGTGAAAGT+AGG 0.538847 5.2:-19699235 MS.gene027978:CDS
CTGATAATGATTCCTTGGAC+AGG 0.539264 5.2:+19691037 None:intergenic
GCAGCATCTTATACAATTGT+GGG 0.539802 5.2:-19685115 MS.gene027978:CDS
TAATGATTCACAACTCAAAG+TGG 0.539817 5.2:-19685884 MS.gene027978:CDS
AATCCAAACCGAGTACCACT+TGG 0.540435 5.2:+19690895 None:intergenic
TATGTTGTCATGCAAGAAGA+TGG 0.541516 5.2:+19685018 None:intergenic
CCTTTGACAACTATGAAAGA+TGG 0.543254 5.2:-19702815 MS.gene027978:CDS
TGACAATAGCCTGTTGCACC+TGG 0.545256 5.2:-19685644 MS.gene027978:CDS
AAGGCTTCAACTAATGAGAA+AGG 0.545703 5.2:-19687853 MS.gene027978:intron
GTTGTAGATGGTTACAATAG+AGG 0.545720 5.2:-19685769 MS.gene027978:CDS
AGTTGTCAAAGGTCAGTACA+TGG 0.555082 5.2:+19702826 None:intergenic
GTAGTTTACCATGGTCATCA+AGG 0.559723 5.2:+19699383 None:intergenic
GTCGAACAGTACTGTGGAGT+CGG 0.563260 5.2:+19698970 None:intergenic
TCATAGATTGTCTCCATGAA+CGG 0.565673 5.2:-19685699 MS.gene027978:CDS
CAATAGCTGTGTAACCATCT+CGG 0.571145 5.2:+19699185 None:intergenic
CAGTACTGTGGAGTCGGAGG+GGG 0.574133 5.2:+19698976 None:intergenic
TCTGATCGGGCAAGGTCTGT+GGG 0.575828 5.2:-19702772 MS.gene027978:CDS
CCATCTTTCATAGTTGTCAA+AGG 0.576139 5.2:+19702815 None:intergenic
TGACTCACCTCGAGCTAGGA+AGG 0.576429 5.2:-19687890 MS.gene027978:CDS
TTAAAACAGCCCGATCGGCA+TGG 0.578137 5.2:-19699622 MS.gene027978:CDS
AACAGTACTGTGGAGTCGGA+GGG 0.581595 5.2:+19698974 None:intergenic
GGAACTATTCCAACGGAGGA+GGG 0.588081 5.2:+19702849 None:intergenic
AGACCTAACATTAACTTCCA+AGG 0.588204 5.2:+19684878 None:intergenic
CATATCATTCAAATATCATG+TGG 0.590012 5.2:-19699674 MS.gene027978:CDS
GTTGTCAAAGGTCAGTACAT+GGG 0.590046 5.2:+19702827 None:intergenic
ATGCAGATTTGAGCGTGGAA+AGG 0.592237 5.2:-19686836 MS.gene027978:intron
ATGTTGTCATGCAAGAAGAT+GGG 0.592700 5.2:+19685019 None:intergenic
CTGTGGGATGTTATCAGTGG+TGG 0.595599 5.2:-19702756 MS.gene027978:CDS
CAAGTTTCACTAGCTCATTG+TGG 0.596842 5.2:+19685161 None:intergenic
AATGAAAATCAAGACAGAAG+TGG 0.598205 5.2:+19684949 None:intergenic
CGAAGAAGTATGCAATTCCA+CGG 0.600443 5.2:+19686354 None:intergenic
ATGCCTTCAGCTTTCCCAAG+TGG 0.603248 5.2:-19690910 MS.gene027978:CDS
TATCAGTGGTGGTTCTGCTG+AGG 0.603911 5.2:-19702745 MS.gene027978:CDS
GTACCACTTGGGAAAGCTGA+AGG 0.605055 5.2:+19690907 None:intergenic
AAGAACCCAAATGTGCTGCC+AGG 0.606388 5.2:+19685626 None:intergenic
AACTTGACTCACCTCGAGCT+AGG 0.606840 5.2:-19687894 MS.gene027978:CDS
ACGAACGACACTCAACAAAG+TGG 0.607670 5.2:-19683052 MS.gene027978:CDS
TTGTCAAAGGTCAGTACATG+GGG 0.610022 5.2:+19702828 None:intergenic
GAACAGTACTGTGGAGTCGG+AGG 0.613241 5.2:+19698973 None:intergenic
ATCCAAACCGAGTACCACTT+GGG 0.615724 5.2:+19690896 None:intergenic
ACAGTACTGTGGAGTCGGAG+GGG 0.616686 5.2:+19698975 None:intergenic
GATCATAAATGCTATGAGAG+AGG 0.618026 5.2:-19685812 MS.gene027978:CDS
CAGCAATTACTGCAACGTGA+AGG 0.618293 5.2:+19699272 None:intergenic
GCCACCCCAGATATTGAGCA+AGG 0.622814 5.2:-19702669 MS.gene027978:intron
AGATTGTCTCCATGAACGGA+AGG 0.625661 5.2:-19685695 MS.gene027978:CDS
ATATTCCTATAACTTCACAA+TGG 0.628689 5.2:+19685938 None:intergenic
ATGTTGAATGCAGCCCAACA+TGG 0.628886 5.2:-19685844 MS.gene027978:CDS
ACCTTGCTCAATATCTGGGG+TGG 0.632174 5.2:+19702668 None:intergenic
AACGGAGGAGGGAACACTCG+TGG 0.638499 5.2:+19702860 None:intergenic
CTATTCAGTAGCGTTGAGAG+TGG 0.644062 5.2:-19699361 MS.gene027978:CDS
GCGTTTCAAAGACCTGTCCA+AGG 0.645643 5.2:-19691049 MS.gene027978:CDS
GGACAGACAGAGGTTGTGCA+GGG 0.645924 5.2:-19683031 MS.gene027978:CDS
AATGTTAAGATCAGCAACAG+TGG 0.649544 5.2:+19686749 None:intergenic
AAAAGCTGCAGCAAACATGA+CGG 0.658540 5.2:+19685078 None:intergenic
ATTGCATGCAGATTTGAGCG+TGG 0.660431 5.2:-19686841 MS.gene027978:intron
TCAACAAAGTGGACAGACAG+AGG 0.662687 5.2:-19683041 MS.gene027978:CDS
AGAGACTTGGGGAACAACCA+GGG 0.664305 5.2:-19683094 MS.gene027978:CDS
GGTACGATATCACTAGCACT+AGG 0.667048 5.2:+19690967 None:intergenic
CTACTTGGTAGAATGTTCCG+TGG 0.670682 5.2:-19686371 MS.gene027978:CDS
GGATTTGTCGAACAGTACTG+TGG 0.672988 5.2:+19698964 None:intergenic
GGTCTGTGGGATGTTATCAG+TGG 0.675496 5.2:-19702759 MS.gene027978:CDS
TCAGTCGCCTTCCTAGCTCG+AGG 0.679086 5.2:+19687883 None:intergenic
ATATGCATGAAAGACCGAGA+TGG 0.679551 5.2:-19699199 MS.gene027978:CDS
TACATGGGGAACTATTCCAA+CGG 0.679591 5.2:+19702842 None:intergenic
TAATCGACAGGAGAGACTTG+GGG 0.682748 5.2:-19683105 MS.gene027978:intron
CGAACCTTGCTCAATATCTG+GGG 0.684426 5.2:+19702665 None:intergenic
TACCATAGCCTTGATGACCA+TGG 0.690835 5.2:-19699391 MS.gene027978:CDS
TACTGAATAGTAGTTTACCA+TGG 0.704601 5.2:+19699374 None:intergenic
CAGACAGAGGTTGTGCAGGG+TGG 0.709413 5.2:-19683028 MS.gene027978:CDS
ATGGGGAACTATTCCAACGG+AGG 0.719621 5.2:+19702845 None:intergenic
GAAGGCGACTGATACCAACA+AGG 0.753545 5.2:-19687872 MS.gene027978:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.2 gene 19682980 19702889 19682980 ID=MS.gene027978
chr5.2 mRNA 19682980 19702889 19682980 ID=MS.gene027978.t1;Parent=MS.gene027978
chr5.2 exon 19702670 19702889 19702670 ID=MS.gene027978.t1.exon1;Parent=MS.gene027978.t1
chr5.2 CDS 19702670 19702889 19702670 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19699564 19699761 19699564 ID=MS.gene027978.t1.exon2;Parent=MS.gene027978.t1
chr5.2 CDS 19699564 19699761 19699564 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19698909 19699427 19698909 ID=MS.gene027978.t1.exon3;Parent=MS.gene027978.t1
chr5.2 CDS 19698909 19699427 19698909 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19690872 19691093 19690872 ID=MS.gene027978.t1.exon4;Parent=MS.gene027978.t1
chr5.2 CDS 19690872 19691093 19690872 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19687854 19687928 19687854 ID=MS.gene027978.t1.exon5;Parent=MS.gene027978.t1
chr5.2 CDS 19687854 19687928 19687854 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19686664 19686852 19686664 ID=MS.gene027978.t1.exon6;Parent=MS.gene027978.t1
chr5.2 CDS 19686664 19686852 19686664 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19686324 19686398 19686324 ID=MS.gene027978.t1.exon7;Parent=MS.gene027978.t1
chr5.2 CDS 19686324 19686398 19686324 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19685561 19685991 19685561 ID=MS.gene027978.t1.exon8;Parent=MS.gene027978.t1
chr5.2 CDS 19685561 19685991 19685561 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19684882 19685266 19684882 ID=MS.gene027978.t1.exon9;Parent=MS.gene027978.t1
chr5.2 CDS 19684882 19685266 19684882 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19684721 19684773 19684721 ID=MS.gene027978.t1.exon10;Parent=MS.gene027978.t1
chr5.2 CDS 19684721 19684773 19684721 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
chr5.2 exon 19682980 19683117 19682980 ID=MS.gene027978.t1.exon11;Parent=MS.gene027978.t1
chr5.2 CDS 19682980 19683117 19682980 ID=cds.MS.gene027978.t1;Parent=MS.gene027978.t1
Gene Sequence

>MS.gene027978

ATGAAAGCCACGAGTGTTCCCTCCTCCGTTGGAATAGTTCCCCATGTACTGACCTTTGACAACTATGAAAGATGGAGTGTTCTTATGAAAAATTATCTGATCGGGCAAGGTCTGTGGGATGTTATCAGTGGTGGTTCTGCTGAGGCTTTATTGGAAGAGAATTCTGAAGCATGGAAGCACTTGAGCAACAAGTTAGAAGCCACCCCAGATATTGAGCAAGGTTCGTATGTAATCTAATCAAATTCTAATTGTAATACAACACTCCAGAAAAGTTATCATCCTCGCTCATGATTTAAATCTTGATTTTAGGGTGTTTAAGAGTTTCTGCGATCAGTTAAGGTTTTTTTTTGGTCAAACTTAAGTTTAACCTAATAACTTTATTTTATTTTTTTTTGTCAAATAGTGTAGTGTGTAGAATTCACTTTTTTTTAAGGTGAACAAGATAAGTGGGGTGTTCTGGGTTCATATAACAATGCATTATCTAAGTTTAACCTAATAACTTTAATTCTGACTTTCTGAGTTTGAACCCCCAACCTTACATATAACAAAGCATTATCTATGAAAATAGTAGTATGCTCACGGAAATACGTGATGATTTAAATATACCCAACAAAGAGTGTTTTGATCCAATTAAGTTTGGGTCTAACATAAACCAACCCATTAAAATATTAAATAATTGTTCCCGTGAGCTTAGCTCAGTTGTTAGGGATATTGCATAATTTATGCAGGGGTCGGGGTTCGAACCTCGGACACCCCACTTCTCCACATTTAATTGTGTGAGCTCTAGCCACTAGGCTACTAGACCAAAAAAAAAATATTAAATAATTTGATTAAGATATTGTGTATATGATTTTAAAACCGTAAACTTACAAATCCAACCCTTAAAAAAAATATTTTGAAAATTCTTTATTTTAATTTTTTTAATTTTATAGAGTTTTTAATTGTTTATGTTAAAACTTTTTTGTTATTAATTACAAGTGTTTCAATTTAACTTAAGTGTTAAAATTTTAAATTGTAAAATTAACATAATTTTATTTTATGTAAACTGGGTATCCTCCACAAGTAACTGCGGAGACTAATCTCTCGAACATTGGAAACCCAAATAAGCGGCAAACTCTTCCTAAAAAATACAGATTTTTTATATAACTCATATTAATGAAATTTTACCCTTATTTAATTTGTTCTTGTATCATTTTGGACCCAAGCCCAGCTAGGTGGGCCTCTTTTTTTTTTCTTCTCTTTTTGCTAATAAATATTTGACTATTACTTTTCCCACTCTATGACAGTCTCACATACCCTGTAAAATTTCTAAAAATGTCTCTTGTAGTTTGGATTTCATAATCCGAACTATGCTTATGTATAATCAACAATCATAATTACTCCCATTTCAACAATTTTGAATTTTGCTTTTAAAAACAATAAAAAATCCAAGTAAAAAAATGACAAAAACCTATCAAATAAAATCATAAAAACACAAGGATGAGAGTTAGGAAGATTAATATTGTCTTAAAATGACAATCCATGTTACAAACATGTTCAAAATTGGTGCTGATGCAGTTTGGATATGTAATCCGAATTGCATCAGCACACTGAAAACAAGGGTCCAAACGTTGGAATTTTGGATTTTGAGGTGTGGAGTCCCGTAAGAAGTCCCTTCTAAGAGAGTATTGATCCAAAAACACAAGGATGATAATTAGGAAGATTAATATTTTTCTTAAAATGACTATCCATGTTACAAACATGTTTAAAATTGGTGTTGGTGCAGTTTGGATTATGTAATCCGAACTGCATCAGCACCATGAAGAAAAAAAAGGGTGTTTAATGGGTGTTCGGATTCTATAATCCAAAAAATAAAATAAAATAGCATGCCCTATTTTTTTGAGGTTTTAGGATTATAAAATCCGAATTGGTGAAAAAAAACTCATTTTTTCACCCTAGGGTGGAAAAAACTCAACTTCGGATTTTATAATCTGAAGGGTATTTTGGGAACAAAATAGGGCGCGCGAAAAACAGACAGGGTGGAAAAAGTAATAGTCTAAATGTTTTAGGTGAGTTGAGTTTCAAAATGCCTCAAGGCGTAAAAATGTGGGCACGACAAAATCTGATTTTATGTGTTTAGTTGGATTGAATGACAATGTAGAATTTTGTTTTTCCAAACTCAAAAAACATAGTTCAATATTATATAATCCGAAATATTTAAAAAAAAATAAGAAACACACTTGAGCAAACATGTTATATATGTCTATATATAACCGACTCAGTCACCCGAACACCAAGTTTTTCTTTTAACTATGAATGTGCACTTCCAAAACTTGAAACATAAGAAGCACATTGGAGCGATCAATTAGGATGGTTAATATGATTCTTCAACAGGTTATCCCTGTCACAAACAAATTCAATTGTGTGTTAGTACAATTTGAATTATATAATCTGAACTTGTTTTTTCCATGATCTTTTTGGCACAATAAGGGTCTATGGAAGTGTTCGGATTCTAAAATCCGGAATGAAAAAAAGCACTTTGGATTTTATAACTCAAACTTGTGATAAAAAAATCCATGGAAAAAATGTGAAATTTAATTTTGACATAGGGGGTGTTCAGATTATAAAATCCGAATTACTTTTTTCTTTCGAATTTAAAATCCGAATAAGTGAAAAATGCATTTTTCCACCAAAAAATATAGGGGAAAATCTCATTTCGGATTATATAATCAGGAAATTTGAGGGTAGTTTTGAGATTTTAGAGGGCACATGAGAAGCTAATAAGTTGAAAAATGAAATTCGCATCACAAGATGTGCAACGATATGGGCTCACTCAACTTAGCCCACTTGCATTTTCGGTTGATTGACTATGTTTGTATCACGCACAAGTGTCTTTCCTAACATTGTATTAAAATGGGAAATTTTACCATATACCCCTACTATGTCAGACATCAAATTGTTAGATCTAACAATTCTTGAGGCTGCAACTAGTAGCTACAGCGAGTCTCTAATGTGCTTTTATTTGGATTTTTAGCGAGCATAAAATGGTAAATGTGTCTCCAGCTCTTTCAATCATGTATATACATGCTCTTTTGTCCTCTACTATATCTACTTAATTACAAGCAATGGATATGAAAAATATTTGAAAGGTTTTGGCGCTGCTAATGAAGTTGAAAGAGAAGCCTCCTGGAAAATGAAAACTGCAAAAGCTTTGCATATCATTCAAATATCATGTGGACAGCAGATTCAGGATGAGCTTTTTCATTTTAAAACAGCCCGATCGGCATGGGAATATTTGGCTGATAAATACGGAGATTTTTCAAATGGCAAACTAGATGGATTGCCAGGTACAATTTTAAAATGTTATTGTTACTTCCTCCTTCTATTTTTATAAGCATCCATTGTATATATTCAATATATTGTTACACTATGTTTATCAAGAGTCTCGTTTCGTTTAATCTACTCATGGAATGTAAATGGCAGCTGTACTATTGCAATACCATAGCCTTGATGACCATGGTAAACTACTATTCAGTAGCGTTGAGAGTGGTAATTATATTGGAGACATCATTAAGGATTCAGATGTATATATAACATCTGCTTCGGATAGAACGCTCCTTCACGTTGCAGTAATTGCTGGAAATTTGAAAAACGTGGAAAAGTTGGTGAAAGTAGGGAAACACAAGTTAATATGCATGAAAGACCGAGATGGTTACACAGCTATTGCTCTTGTTGCTCGTTATACCGGAAACACTGATATAGCAAAGTGCATGATAGAGAAAAATAAGTGGTCTAACTCCCAGGTATCCCGTGAAAATCAACTTGAAATCGAGAATAGGGACAATGTAATCCCTATTCTTCTAGCTGCCGCTAATGGACACAAAGAATTAACTAGCTATCTTTTCTCCAAAACCCCCTCCGACTCCACAGTACTGTTCGACAAATCCAATTCACAGAATCGAGTTTTGCTTCTTTCACTATGTATCAATGCTGAAATATTTGGTAAGCAAAGTTTCTTACGTTATTCTAAAAGTAATGTTATAATCAAGTTGTATAATCACTGTACTTTTAACAGTTGTTTGAGAGTAATAAATAAATAGAACTCATTTGCAAAAAATTAAATCTCAAGACTATTTGAACTTGTTGCGGATTCGATGAAAAAACTCACACCAATAACAACTTGATGTGTGGAGCAAGGGATAATAAAGCAACCAATAATCAAAGTGAATAGAACAGTAATAATCACAAGCCAAAAGTAGAAAACAACACAGCAAGAGAAAAGAAGAAGAGAGAACACAAAGAATCTGTTTACCCAGTTCGGTCCAAATTGACCTAGTCTGGGGGAGAGAGCAGCCCTCCGTTCCACTATATGATGAGTAACGTTACAAAAGAGATTTCAATGGGTTACAAGAATAAGTCTCCCGCCTAATTCTACCCAAATCCCAGCCTCTTCCCGTAACCAAGAGACTCAATCCTAATAGTGTTTCCCAAGGTGAATCAACCTTCAAACCCTAGTTTGTTGCCAAGAGACAAACTCTATACAAACCCTAGTTTGATTTCTAAACCCTTGTTTCAGCCCCCTCTATCTCTCTCAAAATAGTCTGATACAAGGCCTATATTTATAGTAAAAGAAACTCCCATAAAATTGTAACAAATCTGGCCCAAAAATACGTTTCTGAAAAATAACAGCACGCGAAATCGGCCACCGATTTTTCCCAATCGGCCACCGATTTTTCCCGAACAGAAAGCCTCCCAAAAGGCAGCCAAAATCGGCCACCGATTTTCCAAATCGGCCACCGATTTGTACTTTCAGCAAACATCAATTTTGGCCTCCAAACTCCAATTTTGAGTCACTTTCACAACAATCTCCACCTTGACTCCAAATTAGTGATGATGCCCATTTAACATCAACACCTTGCTGCTCTTTCCCTTGCTTCCCACTACACCAAGTAGCTCCACAAGTTTACACCTTAATCTCTTCAATCATCGGAATGCCTTCCGCCCCTTTGAAGATCCTTGTGTCCAAACTACTCAAGGAATTGTAGGTAGTTCCACAAGTACACACCTTAACCTCTTCAGCCATCGGAATGTCTTCCGCCTTCTCGAAGATCCTTGTATCCAAACTACACTAGGAATTTCAGGTAGTTCTACAAGACTACACCATACCTCTTCAATACGAGACATCTCCCGCTTCCTTGAAGATCACCTTGCATCCAATCACCCTTGGACTTTTAGGGTAATTCCACAAGCCGTGCTATACATTCTTCAACCTCCGGAATGCCTTCCGTCTTCATGAAGAAAACCCTTGCTCACCACTAGAGCATAGCACCCAAGGTCCTCCATAGTCGTACCACTCCCGGTGTGTTCAACTCCACCTAAAGCTGAGCTTCCAACCTCTCAACTAGCAAATGAGTACATCCCACTATGTCTTCCTTGAACCTCCACCTCAACCGGTAGATCATGAGTATTCTTACCACCGCCTCTCCAGGCTGATGTTGAGTGTTTAACGTCTCTCCAGACGATCACCGCTCTACCAGGCATCACCCCCAAGGTGAGAAACATCACCTTCATCCTCTAAACAGCACACCATCAAAGCACCTGCATCCTCATAACCCTCAGAGACAATTTGTACGGAATTACCAATCTCCGGACAATCCTTCTTGAAGTGACCCATCTTGTTACACTTAAAGCATTTAAACTTTGTCTTGTTACTACTCTTTCCCCGGTTACCTCTACCTCCACCATTCCCTCTTGAAACACTTAGGCCTTCCCCGTTTTCATCAACTCTCAAGTCCTTCGACTTAGTCAACTCCTTGGTTCTCAAAGCCGCTTGAACTTCTTCCAAGGTAACAGTGCCTTCTTTTCCATAGAGCATGGTATCTTTAAACGATTCAAAAGATCTAGGTAGAGCACACAACAAGAGTATAGCTTTATCTTCATCCTCAAGATTCACCTCAATATTCTCCAAGTCATCAAGGATTTTGTTGAACTCCGTAAGTTGCTCCATGATGGCCTTTGACTCCACCATCTTGAATGAGTAGAGTTGTTGCTTTAGGAATTGCCGATGAGCCAAAGACTTTGTCATATACAAAGATTCCAACTTTGCCCACATCGATGCCGCGGTTGGTTCCTTTGCTACTTCTCTCAAAACTTTATCTCCGAGGCACAAGACAATGGCACTCCTGGCCTTGTCCACCATCTCGGTCTTCTCCGCTCGTGTCATGGTGACCGGTAACGAACCTTCACCCTTCAAAGCTTTCTCACACTTTTGCTGTATTAACACCGCTTCCATCTTTACCTTCCATAACCCAAAATCGTTATCTCCGGTAAACTTCTCAATATCCCACTTCGAACCCATGGTACTTGATTATCCTTTGACCTTTGCCCCACGGTGGGCGCCAATTGTTGCGGATTCGATGAAAAAACTCACACCAATAACAACTTGATGTGTGGAGCAAGGGATAATAAAGCAACCAATAATCAAAGTGAATAGAACAGTAATAATCACAAGCCAAAAGTAGAAAACAACACAGCAAGAGAAAAGAAGAAGAGAGAACACAAAGAATCTGTTTACCCAGTTCGGTCCAAATTGACCTAGTCTGGGGGAGAGAGCAGCCCTCCGTTCCACTATATGATGAGTAACGTTACAAAAGAGATTTCAATGGGTTACAAGAATAAGTCTCCCGCCTAATTCTACCCAAATCCCAGCCTCTTCCCGTAACCAAGAGACTCAATCCTAATAGTGTTTCCCAAGGTGAATCAACCTTCAAACCCTAGTTTGTTGCCAAGAGACAAACTCTATACAAACCCTAGTTTGATTTCTAAACCCTTGTTTCAGCCCCCTCTATCTCTCTCAAAATAGTCTGATACAAGGCCTATATTTATAGTAAAAGAAACTCCCATAAAATTGTAACAAATCTGGCCCAAAAATACGTTTCTGAAAAATAACAGCACGCGAAATCGGCCACCGATTTTTCCCAATCGGCCACCGATTTTTCCCGAACAGAAAGCCTCCCAAAAGGCAGCCAAAATCGGCCACCGATTTTCCAAATCGGCCACCGATTTGTACTTTCAGCAAACATCAATTTTGGCCTCCAAACTCCAATTTTGAGTCACTTTCACAACAATCTCCACCTTGACTCCAAATTAGTGATGATGCCCATTTAACATCAACACCTTGCTGCTCTTTCCCTTGCTTCCCACTACACCAAGTAGCTCCACAAGTTTACACCTTAATCTCTTCAATCATCGGAATGCCTTCCGCCCCTTTGAAGATCCTTGTGTCCAAACTACTCAAGGAATTGTAGGTAGTTCCACAAGTACACACCTTAACCTCTTCAGCCATCGGAATGTCTTCCGCCTTCTCGAAGATCCTTGTATCCAAACTACACTAGGAATTTCAGGTAGTTCTACAAGACTACACCATACCTCTTCAATACGAGACATCTCCCGCTTCCTTGAAGATCACCTTGCATCCAATCACCCTTGGACTTTTAGGGTAATTCCACAAGCCGTGCTATACATTCTTCAACCTCCGGAATGCCTTCCGTCTTCATGAAGAAAACCCTTGCTCACCACTAGAGCATAGCACCCAAGGTCCTCCATAGTCGTACCACTCCCGGTGTGTTCAACTCCACCTAAAGCTGAGCTTCCAACCTCTCAACTAGCAAATGAGTACATCCCACTATGTCTTCCTTGAACCTCCACCTCAACCGGTAGATCATGAGTATTCTTACCACCGCCTCTCCAGGCTGATGTTGAGTGTTTAACGTCTCTCCAGACGATCACCGCTCTACCAGGCATCACCCCCAAGGTGAGAAACATCACCTTCATCCTCTAAACAGCACACCATCAAAGCACCTGCATCCTCATAACCCTCAGAGACAATTTGTACGGAATTACCAATCTCCGGACAATCCTTCTTGAAGTGACCCATCTTGTTACACTTAAAGCATTTAAACTTTGTCTTGTTACTACTCTTTCCCCGGTTACCTCTACCTCCACCATTCCCTCTTGAAACACTTAGGCCTTCCCCGTTTTCATCAACTCTCAAGTCCTTCGACTTAGTCAACTCCTTGGTTCTCAAAGCCGCTTGAACTTCTTCCAAGGTAACAGTGCCTTCTTTTCCATAGAGCATGGTATCTTTAAACGATTCAAAAGATCTAGGTAGAGCACACAACAAGAGTATAGCTTTATCTTCATCCTCAAGATTCACCTCAATATTCTCCAAGTCATCAAGGATTTTGTTGAACTCCGTAAGTTGCTCCATGATGGCCTTTGACTCCACCATCTTGAATGAGTAGAGTTGTTGCTTTAGGAATTGCCGATGAGCCAAAGACTTTGTCATATACAAAGATTCCAACTTTGCCCACATCGATGCCGCGGTTGGTTCCTTTGCTACTTCTCTCAAAACTTTATCTCCGAGGCACAAGACAATGGCACTCCTGGCCTTGTCCACCATCTCGGTCTTCTCCGCTCGTGTCATGGTGACCGGTAACGAACCTTCACCCTTCAAAGCTTTCTCACACTTTTGCTGTATTAACACCGCTTCCATCTTTACCTTCCATAACCCAAAATCGTTATCTCCGGTAAACTTCTCAATATCCCACTTCGAACCCATGGTACTTGATTATCCTTTGACCTTTGCCCCACGGTGGGCGCCAATTGTTGCGGATTCGATGAAAAAACTCACACCAATAACAACTTGATGTGTGGAGCAAGGGATAATAAAGCAACCAATAATCAAAGTGAATAGAACAGTAATAATCACAAGCCAAAAGTAGAAAACAACACAGCAAGAGAAAAGAAGAAGAGAGAACACAAAGAATCTGTTTACCCAGTTCGGTCCAAATTGACCTAGTCTGGGGGAGAGAGCAGCCCTCCGTTCCACTATATGATGAGTAACGTTACAAAAGAGATTTCAATGGGTTACAAGAATAAGTCTCCCGCCTAATTCTACCCAAATCCCAGCCTCTTCCCGTAACCAAGAGACTCAATCCTAATAGTGTTTCCCAAGGTGAATCAACCTTCAAACCCTAGTTTGTTGCCAAGAGACAAACTCTATACAAACCCTAGTTTGATTTCTAAACCCTTGTTTCAGCCCCCTCTATCTCTCTCAAAATAGTCTGATACAAGGCCTATATTTATAGTAAAAGAAACTCCCATAAAATTGTAACAAATCTGGCCCAAAAATACGTTTCTGAAAAATAACAGCACGCGAAATCGGCCACCGATTTTTCCCAATCGGCCACCGATTTTTCCCGAACAGAAAGCCTCCCAAAAGGCAGCCAAAATCGGCCACCGATTTTCCAAATCGGCCACCGATTTGTACTTTCAGCAAACATCAATTTTGGCCTCCAAACTCCAATTTTGAGTCACTTTCACAACAATCTCCACCTTGACTCCAAATTAGTGATGATGCCCATTTAACATCAACACCTTGCTGCTCTTTCCCTTGCTTCCCACTACACCAAGTAGCTCCACAAGTTTACACCTTAATCTCTTCAATCATCGGAATGCCTTCCGCCCCTTTGAAGATCCTTGTGTCCAAACTACTCAAGGAATTGTAGGTAGTTCCACAAGTACACACCTTAACCTCTTCAGCCATCGGAATGTCTTCCGCCTTCTCGAAGATCCTTGTATCCAAACTACACTAGGAATTTCAGGTAGTTCTACAAGACTACACCATACCTCTTCAATACGAGACATCTCCCGCTTCCTTGAAGATCACCTTGCATCCAATCACCCTTGGACTTTTAGGGTAATTCCACAAGCCGTGCTATACATTCTTCAACCTCCGGAATGCCTTCCGTCTTCATGAAGAAAACCCTTGCTCACCACTAGAGCATAGCACCCAAGGTCCTCCATAGTCGTACCACTCCCGGTGTGTTCAACTCCACCTAAAGCTGAGCTTCCAACCTCTCAACTAGCAAATGAGTACATCCCACTATGTCTTCCTTGAACCTCCACCTCAACCGGTAGATCATGAGTATTCTTACCACCGCCTCTCCAGGCTGATGTTGAGTGTTTAACGTCTCTCCAGACGATCACCGCTCTACCAGGCATCACCCCCAAGGTGAGAAACATCACCTTCATCCTCTAAACAGCACACCATCAAAGCACCTGCATCCTCATAACCCTCAGAGACAATTTGTACGGAATTACCAATCTCCGGACAATCCTTCTTGAAGTGACCCATCTTGTTACACTTAAAGCATTTAAACTTTGTCTTGTTACTACTCTTTCCCCGGTTACCTCTACCTCCACCATTCCCTCTTGAAACACTTAGGCCTTCCCCGTTTTCATCAACTCTCAAGTCCTTCGACTTAGTCAACTCCTTGGTTCTCAAAGCCGCTTGAACTTCTTCCAAGGTAACAGTGCCTTCTTTTCCATAGAGCATGGTATCTTTAAACGATTCAAAAGATCTAGGTAGAGCACACAACAAGAGTATAGCTTTATCTTCATCCTCAAGATTCACCTCAATATTCTCCAAGTCATCAAGGATTTTGTTGAACTCCGTAAGTTGCTCCATGATGGCCTTTGACTCCACCATCTTGAATGAGTAGAGTTGTTGCTTTAGGAATTGCCGATGAGCCAAAGACTTTGTCATATACAAAGATTCCAACTTTGCCCACATCGATGCCGCGGTTGGTTCCTTTGCTACTTCTCTCAAAACTTTATCTCCGAGGCACAAGACAATGGCACTCCTGGCCTTGTCCACCATCTCGGTCTTCTCCGCTCGTGTCATGGTGACCGGTAACGAACCTTCACCCTTCAAAGCTTTCTCACACTTTTGCTGTATTAACACCGCTTCCATCTTTACCTTCCATAACCCAAAATCGTTATCTCCGGTAAACTTCTCAATATCCCACTTCGAACCCATGGTACTTGATTATCCTTTGACCTTTGCCCCACGGTGGGCGCCAATTGTTGCGGATTCGATGAAAAAACTCACACCAATAACAACTTGATGTGTGGAGCAAGGGATAATAAAGCAACCAATAATCAAAGTGAATAGAACAGTAATAATCACAAGCCAAAAGTAGAAAACAACACAGCAAGAGAAAAGAAGAAGAGAGAACACAAAGAATCTGTTTACCCAGTTCGGTCCAAATTGACCTAGTCTGGGGGAGAGAGCAGCCCTCCGTTCCACTATATGATGAGTAACGTTACAAAAGAGATTTCAATGGGTTACAAGAATAAGTCTCCCGCCTAATTCTACCCAAATCCCAGCCTCTTCCCGTAACCAAGAGACTCAATCCTAATAGTGTTTCCCAAGGTGAATCAACCTTCAAACCCTAGTTTGTTGCCAAGAGACAAACTCTATACAAACCCTAGTTTGATTTCTAAACCCTTGTTTCAGCCCCCTCTATCTCTCTCAAAATAGTCTGATACAAGGCCTATATTTATAGTAAAAGAAACTCCCATAAAATTGTAACAAATCTGGCCCAAAAATACGTTTCTGAAAAATAACAGCACGCGAAATCGGCCACCGATTTTTCCCAATCGGCCACCGATTTTTCCCGAACAGAAAGCCTCCCAAAAGGCAGCCAAAATCGGCCACCGATTTTCCAAATCGGCCACCGATTTGTACTTTCAGCAAACATCAATTTTGGCCTCCAAACTCCAATTTTGAGTCACTTTCACAACAGAACTTTCATTTAATAGGCTATTTTTTTAGAGAAATTTTGTCTTGAAAATAGAAATAAAAAACATGTAAAAGTTATAAATTTGCAATTTTCTAATATCTCTATTCAAAAAACATTTGTTAGTATTCTCCATTATTGAAATGTGTTGTTTGATTTTGTCTATGATCAGATGTGGCTTTGAAATTACTCAAGCGTTTCAAAGACCTGTCCAAGGAATCATTATCAGACTTTAATTTCACAGTTCCTATGTTGCTTAGGGAATCATTATCATTACCTAGTGCTAGTGATATCGTACCCGATAAATTCTCAAGCTTAGTTGCATTGGCTAAAATGCCTTCAGCTTTCCCAAGTGGTACTCGGTTTGGATTTCTTCAACAAATCATTTACGACCGTAAGTTTTTAAACTTTTCTGTGTTGGTAATATAATATCAAAAATGTTTTATGAAGATTCAATTTTCTCTACACCGACACATCAACTTAATCACCCGTCTCAGTGAAATTCAGAACATAGAACTAGCAAGAATAATTTTAGTACCAGGATGATATAACCCAAAAGTTGTAGTGTGAGGAGGGTATATTTTGTGTAATAAACTGTGCGAGAATTGCTTTAGTTTTGTTACTGAACATGGGCAAGTAAAAATGCGTTCTTTTATTAATTCACTCAAAGAAAAAATATATGGACTCTCCAAGTGAAAAGACTCGTGGTTCTATTTTAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTAACAAGCCAAGCATTATACAATACACCTTCCGATCACTGTTATAAGCAAAACTTTATATTTTAGATTCATTTATTAAATGATGTATATGGCCTATAATAAAGAGCATACACATCATTAAATAAATGAATCTAAAATGCAAAGTTTTGCTTATAATATTGACCGGAGAGTGTAGCTAACAAATACATCACTTTCTAAAGAGAGAGGGATATGCCTTGACTCAGTAAAACAATAACAACAATGGTCAAAGATAACAAACAAGTACAGGTAGTTATCTAAAAGAGAGAGAGAGAAAAGGGTTAGTTGTTTAATAGGCTAAGACAAAATCATAAGAGACAATAAAACTATTTCTCTAGTAAAAATATCTTTCCAAATTTCTCACTTAAAATAATATGATACTAAAACTTTTGGACTATATATAAACGGAAATGCTATGTACAGCGAACATGTATTCGCAATTGGTTCCTGAATGATGTGGCAGATTACTATTCCTTGGATTTCATACTTTTTTTTTTCTACTGCTTCATCAAAACAATATATGACCCACCATCCCATGATTTTCGATCAGGCAAAATTTTTACCGGCTAACATTCAATTCGTGAACGTTTCGTGGTACAATCATTTGGGATATATAGCACTACTCATATATAAAATTTACAATACCGAAGGGCTCGTGATCAATATTTACGATGCCAAAATACATCTTTGCCCTACAAACCCTCTATCGAGCAGAGGCACAGTCGTAAGAGGGTCCAAATGTAGCATACATCACACGTTCAACAAAGATACCTTAGCCCTACACACAACAATAAGAAACTTAGGATTCCCCAAAATTTGTAATGCTTTCCACCACCAATATTACTCTCTAACGTTTGACAAAAACTCATCGTTGTAAAAGCCTTCCAACGTCTATTTCGACAACTACCATGCTAGTTGTATACAAAGGTCTTTTGACACAACCTTAGGTACACAACTCCTTTCAATAATTGTCACTCTCGCTCTCTCACTTACTTGAGCATTAGAGTGTTAGTAAGGTATTCTGCAAATCGCATCTCGACTGCTCGGCAAAGGCCATTATTCTGATCACCCAGATCAATGGCGCTATCAGCGGGGATTAAGTTTTCCCCATCTAATTTTTTAAAAGATCTGAGCTCCTAGAAAATTCAAAAACTTTCAATGGGTAATAACGATAAGAACTTCCCCAAAAACCTCATCTGTCACATCAATCCTGATGACGGAAGGACTGCTTCGGATTCACACTGGAAAATACTCAATGACTAGAAAGGTCACCACAACTGCCAATAATATATAACACGACTGACACATGTGATAAGGATGGAAGACATCTTGATCAACCTTCTCCAATCCATCCAAAACTAAAATCGATTCATTGAAGATCAAAATATATGTCGTCAACAAGTGGAAAGCATTTGATATTCTTCCGGACGAACAAGCAACATTGCTAAGATCTAGCATTCGGCCATATCAAATTGATGGAACGAATCTCCTTCTCCACAATCACGTAGAATAAGGAACAACATCTTTGAGATATCTAGGTCCCTACAACCTTCTCTCGTGGATCGCCCCTCGAGGTCCCGATAACATGTTGTAGTTGAACGTCCATTTCATCAACCGCATAAATAAGTACCCCTTTATTCCAGATCATCCATCCCCGTTGACATCCCAATTGTATTAGAGAAACCACCACCATTGGACTCGTATGATGGAATCACATATCCAGACGAAGACATTTAGAACATTGAAGTTATACTTGACTACAGGAGAGTACGGGTAGTGGTGAAGTGTAGTCTCTTTAACACAACATCGAGGAAAGACATAATAACTTTGTAAAAAAGTCTTCACCGAGAGTTGATTAACTCGTGGGAGAAACTATATCATCAACTCACTGCACACTTCACAAACATTTCAACATCACCCAAAGACAGTAGAAAACCTCAGAAGCTATTGTCCAAGAAAAAAACTAGTCTCTTATAGGGAATACATTGAACATTTTAACAAAGATGTTGTTCATGTTTGAGGAAGCGACGAGAGAATTATGATGTACCTATTGGAAAGAAATCTCAATAAAGGAAGTGACTTCACCAAAGCCATCAACTTCGAGAAACCAATATATCTTAATAATTTCTTCAATAAAGCCAAAACCTACATAAGATACAAGGAGAAAATTAGCACTCTGGAAGTCAGGAAGCCTTGGCAAGGAGAAGAATCGCAAGTCGAGTCCTCAAGGATAAATAATCAAGGAAAACGCAGGGATGATAAATGTTCAAAAGAAAGTTAGGGATCTGTTGGCCGATGTGGTGAATATACACCTCTTTTGTCATCAAGGGAGTGTATCCTCAAGGAGTGTGTGGCAGAAGAATTCAAAGAAGCAGGAATCAAATTTCCAAAACCTTTTACGCAAAATACTGAAGTTGACAAAACCATTACTGCCGATTTCATAAATGCCATGTGCATAATACTAAGGATTTTTTCCACCTCAAAGATTACCGAGATCATCATAAAACGAGGAGAAAAACTTTACACCAGGAAGAAGAAATAAACTTGACTCACCTCGAGCTAGGAAGGCGACTGATACCAACAAGGCTTCAACTAATGAGAAAGGTGAAAAAAAGTGAAGGCAAAGGCTTACAAGTAGTTATAACAATAATTATACCTTACGGTTTGGATATCTCTCTAGCAATAATGGAAAAGTTAAGAAATCATTTCCTCAGCTTGTAGGAAAACTTCCATGCCACTTTGGGCATATCTGGTGGAGGACTAATTTGCACAACCATCACACAACTCTTAAATTATGTACAATAACATAAACTAGAGATAGATTTGAAGTTCTAAATTAAAGAAAGAGCCTAAAGGAGATAACATGATAACATTATGTAATTTATATTCAAATATGTACTAAGATGTGATTTTCATCCATCTCAATTGAAAAAATAACTAGATTCTTGTCTATTGTCATGAAAGACATTTTTTTGGGGACATAACAGTGTTTTGTCGTGGCGGTAAAGACATTTTATAGTTAATTTTGTTCACTTTGTAAAAATGGGGAAAAACAGTAACGTCGACTACCTATACTTTTTTGTTACAATCTTTTTCTCAATAACAGACTGTTTTTAAAACCGGTCAAGGTGTTTTATGCCTTGTATGAATAGAATTCAGTACCTTGGGCCAATTCAGAACAAGTCCTAGCATATATTCACATATATCTGCATCGTACTTTGATTGGATGCATGTGTAATAAATTTCTATATATATTGTAGTGTTAATATTGTTTTACCCCCCTGTAATATATGCAATATCCAGTTTTCCCCTTGTAATTTTTTTAGATCATGTCATTGTAATTTGATGATTTTTGGTTTTGGACCTTCATGAATTTTGACTGTACAAAATCGATGATATGGCAGGGGATAAACCGAAATTTGTTCAAATTAACAGGAAGTAAACCGAAATTTACTCAAATTACAGGGGGCGAAATTTGCCATGAAGGTTCAAAACAAAAAAATCTTCAAATTACAAGCACGAAATCTAAAAAAAAAGATTACAGGGGAACTGGAAATGACCTATATTATAGGAGGTAAAACACTATTAACCTATATTGCATGCAGATTTGAGCGTGGAAAGGAAATTCAAAGACGACTATGGTATTTCTGATATTTTGAAATTAGTCCGAAATGCAACAAGTGTTGCCACTGTTGCTGATCTTAACATTTGGAAATTAGTCCGAAATGTAACAAGTGTTGCAAGTACTGCTGCTGATAAAAGACCACCAAAGTTTCTTCGTGTAAAGTTTTCAAGTAAGTTCTTCCTCTCTCATAAGACAAAGAAAAACATTTCTTTTTTTATTACCAGCATAATATGTATATATGATTAAATGGTTCAGAGCTTTTCTTTAGGTTGCCTCTTCTGGAAATTATTGATTTCAATATTTCTCGTTTGGCCCATAAAGCTTTTGGGTATGTCGTGTTCTGTCTCCTTGATGGCTATATGTGCTTTAATCATTTTAAATTTCTTCAGTAATTTTATTTATTTATTTCTACACTGATTTGCTGATTTGTTCAGGTCTACTACTTGGTAGAATGTTCCGTGGAATTGCATACTTCTTCGTTCAAATTTTCGTTTACCTAAATATTGTTGGTAAGCAATTAATGATTAATGTTCAAGACTTGAGTCCGGTCATAAAGCTTATTAACAACTTGAGTCCGGATAATATTATTATACTATATCAAGGATTTATTATATTCTTATACAATTTGTCAAAAACAAATATTAGATGAGTTGTGCATTTTATTATAATAAGTAATCTTACAATCGATAGTTGCTCGGTTTACAAAATTAGTTAAGAGTTTATTTTGATATAAAGATTTGTATTGTCAAAATTTCATAATGATTAATATTTGCAAGTGCGACTTAAGAAGTAGTTATGATTAAAACATCAAGACTAATGAAATCTATTCAATTTTTGTCAGGAATAGGAAAAATATATGAACAGAAATATACCCATTGTGAAGTTATAGGAATATTGAATTTCTTCTGCCAAAGTGTTGGAGAATTTAATGATTCACAACTCAAAGTGGCTTTGGCGTATGGTGCAATGTTGAATGCAGCCCAACATGGAATAATCGAGATCATAAATGCTATGAGAGAGGCTAATCCTGATCTGCTTAAAGTTGTAGATGGTTACAATAGAGGCATATTTTCATATGCTATTCTATATCGGAAAAAAAAAGTATTTCAACTCATAGATTGTCTCCATGAACGGAAGGAGATATTAAGATCTTCTAAGGATGTGTTTGACAATAGCCTGTTGCACCTGGCAGCACATTTGGGTTCTTCATCTGATTCTGATAGCAAATCTGGTGCTGCTCTGCAAATGCAAAGAGAAATTCAATGGTTTAAGGTCACCTATCTTATCTCTGTATACTATTGAATGTATTTAATTATTTATTTCACACATTCAATATTAGATGTGCAAAATAATTTATGTAATTTTTTAAAATTGGAGAATGAAGAAACTATTATTATGATTATTATACTATTCAAAGTGGTAATATTATAATATAAGCATATGTAGTTTGTGTCAACTTAATGCCAACACAATGTGATTCAGTCAATCCAGATACGCACTTTTTATCGGTACATATATGTTGTCCATTGCTTCTTCATTATAAGTTAATTGCTTCTAAAATCGCAGGCAGTGGAAAAAGTTGTACATCCCAAGTTTAAGGAAGCCAAAAATTCCGATGGTAAAAAGCCTTATGAAATATTCACTGACAACCACAATGAGCTAGTGAAACTTGGAGAGAAATGGGCAAAAGACACAGCAGCATCTTATACAATTGTGGGCACTCTCATTACTACCGTCATGTTTGCTGCAGCTTTTACAGTCCCAGGTGGAAACGACGACAAAACTGGTTTGCCCATCTTCTTGCATGACAACATATTCACTGCATTTCTCTTAGCAGATGCAATATCTCTCTTCGCATCTGCCACTTCTGTCTTGATTTTCATTGGGATTCTCACGTCGCGTTATGCTGAGAAAGACTTTCTCAAGAGCTTGCCTTGGAAGTTAATGTTAGGTCTTTTTTTCCTTTTTCTCTCGGTTTGTTCCATGATAGTTGCATTTTGCGCTGCCATTATTGATATGATCTTAAAGGGATATGAAACCCATAAGTGGTTCATTGTAGTACCAATCATGTCATTTGGGAGTATTCCCATTATCTTTCTTGTCATATCACAGGTGAGCTTCATGTATGAAATCTTCCGCTGCACATGGAAAAATCCCATCCATTCTACCAAAAAATGACGACAGTAATATGTATGCTTCAAGAGAGGGTAATCACTCGTGAGAACAATAGAGATTGTAGCAATTGCAGAAAAATTTACAGTCTTTCTTTCTATTGTTTCATGAATTTGTAATTTTTCATTAAGAGAAAGAATAATCTTGTACTTCTAATTATTAATGCCACTGTTTTTTTTTTCAAGTAAAACAATAATATTACATACTATGTTGCTTTCATTCACAGCCAAAAGACCAAGAGATACGGGGAATGTGACAGCCATTTCAGAATTTAATTAGAAAAGTCACTTTGGATAAAAATTTCTTCATATTTTGCAACTTACCAAGTCTAGTGATTTGAGATTTCCTTTTAACCAAATTGAAATTTGATCATAACTTAAAATATTCTCAATCTTTAGACTTCTTGCTCTCTCATCATTGATTCAAGGTGTAAATTTTCAAAGGTAAACAAGAGCAAATTCAAGCAAAAGACATCTCCAAAACCAAGAGAAAATATTCAAATAATCTGGAAATGTATTTAACTCACATAGTTTAGGAAAAAATGTGTGTTGAATAATGAGATGGCTCAGTTAATCTGTTACCAACTTAATCGATAGTTTAATGGACTGGAACACTTAAATTGATTATGAGCAAGACTTCTACTCGATCGATTTTGCCTCTCTTTTGTTAAGTCTGTGTGTCATTAAATTGGGTTAGGAATGAGAAAGTGAGGGGAGAGAAAGATGATAAAAAATGGAGTTTTCCTTGTTTAGAAGATAAACAAGGAAATTAACTTGGTGTGACCCACATTAAAGAACCTTTCCTCACTAATCTGAATGAAAAAAAAAAAAAAAAGCATTACTTTTATTATTTAATCCACATATTTTTGTCTCTCACAAGCTGAATCATGGGATCATTGTGTTTGTCAGAATGTGGATGGTCTGGTTTCCCAACAACCACTTTACTTTCCACGATCACTAAACGTACATGCCTTTGATGCAAATTCTCAGAATATTTCTGTGACAGTCATCATTTTTCTACTATACTGTCATTATGTCCACAAAGACTTATTTTTGCAGTAATTATAAACTAGAAGTAGAGTATGTAAGAATGAAATTGAAGAGAATGGGGAAACTCTCTCTATTCATGTAATATTGTCACCCGTGTGTGACTATTTGACAACACTTTTGTAATAAATAGCATATAGCAATCTGTTCAAATTCTACTACGTTACAGTGTTGCTCTTTGACAACTGGTTTGTAGTCAAAAAACTTAAGGAGTTATATGCTTGGTGCAAGTTTTTGTCATAAAATAACATAAAGTACTAGATGGTTATTTCCCAATAGCTATTTGTCAATATAATTTGGGTGAAAAATATAATTGCTTATGCTATAAACAACTTAAACTGTTTATCAAGATAGAGCCTAATTAAATAGATAGGTTTTGATGGAATTTGGCTTCCAACTAAACAAACTACACCATTTTTAGATTTCCTTAATATCATAAAGTATTTATGTGAAGGCTTTCCATAATTATTTGACTAACATAATGATGTAATCGACAGGAGAGACTTGGGGAACAACCAGGGAACGATCAACACATGTGTAACGAACGACACTCAACAAAGTGGACAGACAGAGGTTGTGCAGGGTGGTCATTAGGATCATATGCTGCATTTCGGGAAGATAAGCTAACTCAATAG
Protein sequence

>MS.gene027978.t1

MKATSVPSSVGIVPHVLTFDNYERWSVLMKNYLIGQGLWDVISGGSAEALLEENSEAWKHLSNKLEATPDIEQGFGAANEVEREASWKMKTAKALHIIQISCGQQIQDELFHFKTARSAWEYLADKYGDFSNGKLDGLPAVLLQYHSLDDHGKLLFSSVESGNYIGDIIKDSDVYITSASDRTLLHVAVIAGNLKNVEKLVKVGKHKLICMKDRDGYTAIALVARYTGNTDIAKCMIEKNKWSNSQVSRENQLEIENRDNVIPILLAAANGHKELTSYLFSKTPSDSTVLFDKSNSQNRVLLLSLCINAEIFDVALKLLKRFKDLSKESLSDFNFTVPMLLRESLSLPSASDIVPDKFSSLVALAKMPSAFPSGTRFGFLQQIIYDRRRNKLDSPRARKATDTNKASTNEKDLSVERKFKDDYGISDILKLVRNATSVATVADLNIWKLVRNVTSVASTAADKRPPKFLRVKFSSLLLGRMFRGIAYFFVQIFVYLNIVGIGKIYEQKYTHCEVIGILNFFCQSVGEFNDSQLKVALAYGAMLNAAQHGIIEIINAMREANPDLLKVVDGYNRGIFSYAILYRKKKVFQLIDCLHERKEILRSSKDVFDNSLLHLAAHLGSSSDSDSKSGAALQMQREIQWFKAVEKVVHPKFKEAKNSDGKKPYEIFTDNHNELVKLGEKWAKDTAASYTIVGTLITTVMFAAAFTVPGGNDDKTGLPIFLHDNIFTAFLLADAISLFASATSVLIFIGILTSRYAEKDFLKSLPWKLMLVPIMSFGSIPIIFLVISQERLGEQPGNDQHMCNERHSTKWTDRGCAGWSLGSYAAFREDKLTQ