Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028308.t1 | XP_003608492.1 | 92.6 | 472 | 33 | 1 | 1 | 472 | 1 | 470 | 9.10E-242 | 845.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028308.t1 | P52410 | 87.0 | 408 | 53 | 0 | 65 | 472 | 66 | 473 | 3.0e-209 | 729.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028308.t1 | G7JDY8 | 92.6 | 472 | 33 | 1 | 1 | 472 | 1 | 470 | 6.6e-242 | 845.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49091 | MS.gene028308 | PPI |
| MS.gene038042 | MS.gene028308 | PPI |
| MS.gene006293 | MS.gene028308 | PPI |
| MS.gene24009 | MS.gene028308 | PPI |
| MS.gene89534 | MS.gene028308 | PPI |
| MS.gene028308 | MS.gene39202 | PPI |
| MS.gene46486 | MS.gene028308 | PPI |
| MS.gene94820 | MS.gene028308 | PPI |
| MS.gene028308 | MS.gene41434 | PPI |
| MS.gene034624 | MS.gene028308 | PPI |
| MS.gene028308 | MS.gene34495 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028308.t1 | MTR_4g096690 | 98.517 | 472 | 5 | 1 | 1 | 472 | 1 | 470 | 0.0 | 954 |
| MS.gene028308.t1 | MTR_1g103020 | 90.105 | 475 | 41 | 4 | 1 | 472 | 1 | 472 | 0.0 | 866 |
| MS.gene028308.t1 | MTR_8g099695 | 71.591 | 440 | 124 | 1 | 33 | 472 | 44 | 482 | 0.0 | 662 |
| MS.gene028308.t1 | MTR_8g099715 | 61.412 | 425 | 113 | 3 | 48 | 472 | 21 | 394 | 0.0 | 530 |
| MS.gene028308.t1 | MTR_2g043530 | 59.398 | 399 | 160 | 2 | 74 | 471 | 91 | 488 | 1.34e-173 | 496 |
| MS.gene028308.t1 | MTR_4g124880 | 59.250 | 400 | 159 | 4 | 74 | 471 | 94 | 491 | 2.57e-170 | 488 |
| MS.gene028308.t1 | MTR_2g043530 | 60.665 | 361 | 141 | 1 | 74 | 434 | 91 | 450 | 1.06e-160 | 462 |
| MS.gene028308.t1 | MTR_4g124880 | 60.519 | 347 | 133 | 4 | 127 | 471 | 1 | 345 | 2.09e-149 | 429 |
| MS.gene028308.t1 | MTR_8g099700 | 63.139 | 274 | 74 | 2 | 26 | 299 | 43 | 289 | 2.72e-117 | 346 |
| MS.gene028308.t1 | MTR_1g069385 | 39.631 | 434 | 235 | 7 | 60 | 468 | 37 | 468 | 1.86e-87 | 276 |
| MS.gene028308.t1 | MTR_1g069385 | 43.149 | 343 | 188 | 4 | 131 | 468 | 5 | 345 | 3.39e-81 | 255 |
| MS.gene028308.t1 | MTR_8g099705 | 74.590 | 122 | 31 | 0 | 329 | 450 | 1 | 122 | 1.37e-55 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028308.t1 | AT5G46290 | 80.882 | 476 | 84 | 2 | 1 | 472 | 1 | 473 | 0.0 | 790 |
| MS.gene028308.t1 | AT5G46290 | 78.252 | 492 | 84 | 3 | 1 | 472 | 1 | 489 | 0.0 | 780 |
| MS.gene028308.t1 | AT5G46290 | 69.748 | 476 | 82 | 4 | 1 | 472 | 1 | 418 | 0.0 | 650 |
| MS.gene028308.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene028308.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene028308.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene028308.t1 | AT2G04540 | 40.230 | 435 | 230 | 12 | 60 | 469 | 31 | 460 | 8.21e-82 | 261 |
Find 139 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTATGCTATTACAAATA+TGG | 0.182977 | 4.2:-17534428 | MS.gene028308:CDS |
| TTGGGATTGATTTAGGTTTC+AGG | 0.183362 | 4.2:-17534393 | MS.gene028308:CDS |
| GCCATTATTCCTATTGGTTT+GGG | 0.188973 | 4.2:-17534253 | MS.gene028308:CDS |
| GGGCACTGCCTTGGCGCAGC+TGG | 0.190007 | 4.2:-17532386 | MS.gene028308:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 4.2:-17534400 | MS.gene028308:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 4.2:+17534367 | None:intergenic |
| CCAGGCATTTCAAATTCTTT+TGG | 0.230083 | 4.2:-17531473 | MS.gene028308:intron |
| GGAGAGTCTCTTTGGGGTTT+TGG | 0.230728 | 4.2:+17535003 | None:intergenic |
| TGCCATTATTCCTATTGGTT+TGG | 0.267531 | 4.2:-17534254 | MS.gene028308:CDS |
| GAGACGACGGAGAGTCTCTT+TGG | 0.301000 | 4.2:+17534995 | None:intergenic |
| TGCGAACCGAGTAGGGAATT+TGG | 0.306727 | 4.2:+17534805 | None:intergenic |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 4.2:-17534192 | MS.gene028308:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 4.2:+17531635 | None:intergenic |
| AGAGATTAATGCTATCAAAA+AGG | 0.331270 | 4.2:-17532581 | MS.gene028308:CDS |
| TTGGGATCCTTCTCTCTTTG+AGG | 0.337127 | 4.2:+17534950 | None:intergenic |
| GTGGGATCACATTGATTGAT+AGG | 0.337601 | 4.2:-17534838 | MS.gene028308:CDS |
| CTGTGATACCAGTCTATGAT+AGG | 0.352309 | 4.2:-17532407 | MS.gene028308:intron |
| GGTGGTGGCGGCGGCGGCAT+TGG | 0.352946 | 4.2:+17535030 | None:intergenic |
| AATATGGCTTCAGCTTTACT+TGG | 0.353169 | 4.2:-17534412 | MS.gene028308:CDS |
| GAAGCTGCCATTATTCCTAT+TGG | 0.362133 | 4.2:-17534259 | MS.gene028308:CDS |
| TGGGATTGATTTAGGTTTCA+GGG | 0.362251 | 4.2:-17534392 | MS.gene028308:CDS |
| ATCTTCAAGTGCTTTCTTCC+CGG | 0.364383 | 4.2:+17534694 | None:intergenic |
| GGGTGAAGGTGCTGGAGTTT+TGG | 0.370027 | 4.2:-17534137 | MS.gene028308:intron |
| TTTGTTATGGGTGAAGGTGC+TGG | 0.375390 | 4.2:-17534145 | MS.gene028308:CDS |
| ACCTATCATTGCTGAATACT+TGG | 0.377637 | 4.2:-17533745 | MS.gene028308:CDS |
| CCCCAAACCAATAGGAATAA+TGG | 0.379340 | 4.2:+17534252 | None:intergenic |
| AGACGACGGAGAGTCTCTTT+GGG | 0.379518 | 4.2:+17534996 | None:intergenic |
| TTTGGCGGTGGTGGTGGCGG+CGG | 0.379701 | 4.2:+17535021 | None:intergenic |
| CTCGCTTCATGGCATGTTCA+AGG | 0.383805 | 4.2:+17533772 | None:intergenic |
| GGCACTGCCTTGGCGCAGCT+GGG | 0.383994 | 4.2:-17532385 | MS.gene028308:CDS |
| AGTGATCACGACACGCTTCT+TGG | 0.384823 | 4.2:+17534931 | None:intergenic |
| CGTACGAATTGATTGATTGA+TGG | 0.387158 | 4.2:+17532311 | None:intergenic |
| TTCCACTCTTGTTGGTGACT+TGG | 0.387671 | 4.2:-17532605 | MS.gene028308:CDS |
| GATAGGTGCACCTCGCTTCA+TGG | 0.393092 | 4.2:+17533761 | None:intergenic |
| GGCGGTGGTGGTGGCGGCGG+CGG | 0.396876 | 4.2:+17535024 | None:intergenic |
| ATGCAGCCACCCTGTTGTTA+TGG | 0.398709 | 4.2:+17532334 | None:intergenic |
| TAAAGAACGTGCTGGTGTTT+TGG | 0.402018 | 4.2:-17534542 | MS.gene028308:CDS |
| ACAATAAAAGCCATAACAAC+AGG | 0.409441 | 4.2:-17532344 | MS.gene028308:CDS |
| GTCAGGAATGGGTGGTTTAA+CGG | 0.413571 | 4.2:-17534515 | MS.gene028308:CDS |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 4.2:-17534186 | MS.gene028308:CDS |
| GTGATCACGACACGCTTCTT+GGG | 0.422936 | 4.2:+17534932 | None:intergenic |
| CACTGCCTTGGCGCAGCTGG+GGG | 0.431565 | 4.2:-17532383 | MS.gene028308:CDS |
| CGGAGTGGTTCGAGTGGTGA+AGG | 0.433580 | 4.2:+17535064 | None:intergenic |
| CTCTCTTTGAGGAGCGGCAG+TGG | 0.435852 | 4.2:+17534961 | None:intergenic |
| GGTGGCGGCGGCGGCATTGG+AGG | 0.445582 | 4.2:+17535033 | None:intergenic |
| GCCATATTTGTAATAGCATA+AGG | 0.446803 | 4.2:+17534427 | None:intergenic |
| GTTAAGAATCTGATTGAAAA+GGG | 0.449404 | 4.2:-17534478 | MS.gene028308:CDS |
| CATGCAACTTCCACTCTTGT+TGG | 0.451361 | 4.2:-17532613 | MS.gene028308:CDS |
| GCACTGCCTTGGCGCAGCTG+GGG | 0.451754 | 4.2:-17532384 | MS.gene028308:CDS |
| ACGCCAAGCCCATCAGATCT+TGG | 0.452089 | 4.2:+17533684 | None:intergenic |
| AGTTAAGAATCTGATTGAAA+AGG | 0.455234 | 4.2:-17534479 | MS.gene028308:CDS |
| CTCCGGTACTGCAATGTCGC+CGG | 0.463407 | 4.2:-17534713 | MS.gene028308:CDS |
| TCCCGGCGACATTGCAGTAC+CGG | 0.468002 | 4.2:+17534711 | None:intergenic |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 4.2:-17534185 | MS.gene028308:CDS |
| CCCACCCGCAATCATCAAAT+CGG | 0.469221 | 4.2:+17534285 | None:intergenic |
| GGTGAAGGGCGGAGAGTGAA+GGG | 0.471647 | 4.2:+17535079 | None:intergenic |
| TTGGTTGGGTCAGGAATGGG+TGG | 0.473581 | 4.2:-17534523 | MS.gene028308:CDS |
| CCATTATTCCTATTGGTTTG+GGG | 0.476862 | 4.2:-17534252 | MS.gene028308:CDS |
| CTGCTGCCAATCACATTCGT+AGG | 0.477416 | 4.2:-17534315 | MS.gene028308:CDS |
| ATGACTGATCCAAGATCTGA+TGG | 0.479018 | 4.2:-17533693 | MS.gene028308:CDS |
| CATTATTCCTATTGGTTTGG+GGG | 0.482868 | 4.2:-17534251 | MS.gene028308:CDS |
| GAGGCCGATTTGATGATTGC+GGG | 0.483517 | 4.2:-17534289 | MS.gene028308:CDS |
| CCCAAGTATTCAGCAATGAT+AGG | 0.484502 | 4.2:+17533744 | None:intergenic |
| AAATTCCCTACTCGGTTCGC+AGG | 0.490002 | 4.2:-17534803 | MS.gene028308:CDS |
| CTCACCCCTACGAATGTGAT+TGG | 0.491901 | 4.2:+17534309 | None:intergenic |
| GATCCAAGATCTGATGGGCT+TGG | 0.498358 | 4.2:-17533687 | MS.gene028308:CDS |
| TGCTGCCAATCACATTCGTA+GGG | 0.501866 | 4.2:-17534314 | MS.gene028308:CDS |
| TCTGACCTGCGAACCGAGTA+GGG | 0.504912 | 4.2:+17534798 | None:intergenic |
| GCACTTGAAGATGCTGGTCT+CGG | 0.506363 | 4.2:-17534683 | MS.gene028308:CDS |
| TCCGGTACTGCAATGTCGCC+GGG | 0.507162 | 4.2:-17534712 | MS.gene028308:CDS |
| TTGAGGAGCGGCAGTGGTGA+CGG | 0.507766 | 4.2:+17534967 | None:intergenic |
| AAGAAGCGTGTCGTGATCAC+TGG | 0.508002 | 4.2:-17534929 | MS.gene028308:CDS |
| GAGTAAGACAATACCTCCTC+GGG | 0.513068 | 4.2:+17533618 | None:intergenic |
| ATGCTTCCAAATTCCCTACT+CGG | 0.516081 | 4.2:-17534811 | MS.gene028308:CDS |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 4.2:-17531593 | MS.gene028308:intron |
| AGCTTCTCGCCGGTGAGAGT+GGG | 0.518796 | 4.2:-17534856 | MS.gene028308:CDS |
| TGAGGCCGATTTGATGATTG+CGG | 0.522914 | 4.2:-17534290 | MS.gene028308:CDS |
| AAGAAAGCACTTGAAGATGC+TGG | 0.527588 | 4.2:-17534689 | MS.gene028308:CDS |
| AGCTCTGAGGGTTACATCGA+CGG | 0.529142 | 4.2:-17534764 | MS.gene028308:CDS |
| CGGCGTCTACAAGACTGCTC+TGG | 0.531158 | 4.2:+17533649 | None:intergenic |
| CGGGAAGAATGACCGGAGAC+AGG | 0.533743 | 4.2:-17534744 | MS.gene028308:CDS |
| ATCCGTGGGTTTAGCTCTGA+GGG | 0.533824 | 4.2:-17534776 | MS.gene028308:CDS |
| AAGCTTCTCGCCGGTGAGAG+TGG | 0.533893 | 4.2:-17534857 | MS.gene028308:CDS |
| ATATGGCTTCAGCTTTACTT+GGG | 0.536843 | 4.2:-17534411 | MS.gene028308:CDS |
| ATTATTCCTATTGGTTTGGG+GGG | 0.537089 | 4.2:-17534250 | MS.gene028308:CDS |
| CAATGTGATCCCACTCTCAC+CGG | 0.537398 | 4.2:+17534847 | None:intergenic |
| GCTCTGAGGGTTACATCGAC+GGG | 0.540385 | 4.2:-17534763 | MS.gene028308:CDS |
| GACGACGGAGAGTCTCTTTG+GGG | 0.543879 | 4.2:+17534997 | None:intergenic |
| GATCCGTGGGTTTAGCTCTG+AGG | 0.548499 | 4.2:-17534777 | MS.gene028308:CDS |
| GGTTCGCAGGTCAGATCCGT+GGG | 0.552078 | 4.2:-17534790 | MS.gene028308:CDS |
| CGGTGCCGAAAATCTCGATA+AGG | 0.557505 | 4.2:-17534663 | MS.gene028308:intron |
| CGGTTCGCAGGTCAGATCCG+TGG | 0.558021 | 4.2:-17534791 | MS.gene028308:CDS |
| AGAGTAAGACAATACCTCCT+CGG | 0.558328 | 4.2:+17533617 | None:intergenic |
| GGGATTGATTTAGGTTTCAG+GGG | 0.561124 | 4.2:-17534391 | MS.gene028308:CDS |
| ATGGGTGGCGTCACTGTACA+TGG | 0.561821 | 4.2:-17534905 | MS.gene028308:CDS |
| TGGTGAAGGGCGGAGAGTGA+AGG | 0.562830 | 4.2:+17535078 | None:intergenic |
| GGAGACAATCATCCTGTCTC+CGG | 0.564955 | 4.2:+17534732 | None:intergenic |
| GCCGATTTGATGATTGCGGG+TGG | 0.565161 | 4.2:-17534286 | MS.gene028308:CDS |
| CAATCACATTCGTAGGGGTG+AGG | 0.569075 | 4.2:-17534308 | MS.gene028308:CDS |
| AATCAGATTCTTAACTCCGT+CGG | 0.570042 | 4.2:+17534486 | None:intergenic |
| CCTATCATTGCTGAATACTT+GGG | 0.577362 | 4.2:-17533744 | MS.gene028308:CDS |
| ACGGTATCAAAATCAACTGC+AGG | 0.580461 | 4.2:+17531629 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 4.2:-17534751 | MS.gene028308:CDS |
| TGCCGCTCCTCAAAGAGAGA+AGG | 0.582705 | 4.2:-17534957 | MS.gene028308:CDS |
| TGCCAAGTCACCAACAAGAG+TGG | 0.586198 | 4.2:+17532603 | None:intergenic |
| TTCTACGAGAAGCTTCTCGC+CGG | 0.588660 | 4.2:-17534866 | MS.gene028308:CDS |
| TACCTCCTCGGGTGACACAC+CGG | 0.588795 | 4.2:+17533629 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 4.2:-17531447 | MS.gene028308:CDS |
| CTGCTGCTTGACATTTGCCA+CGG | 0.591270 | 4.2:+17531610 | None:intergenic |
| TCTATGATAGGGCACTGCCT+TGG | 0.593139 | 4.2:-17532395 | MS.gene028308:CDS |
| GCGTGTCGTGATCACTGGCA+TGG | 0.595938 | 4.2:-17534924 | MS.gene028308:CDS |
| ATGACATGATAATACCTTGG+TGG | 0.596589 | 4.2:+17532525 | None:intergenic |
| CGTGTCGTGATCACTGGCAT+GGG | 0.597426 | 4.2:-17534923 | MS.gene028308:CDS |
| GTCGTGATCACTGGCATGGG+TGG | 0.597540 | 4.2:-17534920 | MS.gene028308:CDS |
| CCGATTTGATGATTGCGGGT+GGG | 0.602467 | 4.2:-17534285 | MS.gene028308:CDS |
| TGTGATACCAGTCTATGATA+GGG | 0.603213 | 4.2:-17532406 | MS.gene028308:intron |
| ATCCTTCTCTCTTTGAGGAG+CGG | 0.604302 | 4.2:+17534955 | None:intergenic |
| GGAGTGGTTCGAGTGGTGAA+GGG | 0.605118 | 4.2:+17535065 | None:intergenic |
| ATCTGACCTGCGAACCGAGT+AGG | 0.609425 | 4.2:+17534797 | None:intergenic |
| GGAGACAGGATGATTGTCTC+CGG | 0.614203 | 4.2:-17534730 | MS.gene028308:CDS |
| CATCAAAATTAATGCCACCA+AGG | 0.623828 | 4.2:-17532539 | MS.gene028308:intron |
| CCATCACGGTCTTTATCCCA+AGG | 0.625058 | 4.2:+17534169 | None:intergenic |
| CCTTGGGATAAAGACCGTGA+TGG | 0.627148 | 4.2:-17534169 | MS.gene028308:CDS |
| CTTGAACATGCCATGAAGCG+AGG | 0.627955 | 4.2:-17533771 | MS.gene028308:CDS |
| CGCCGGTGTGTCACCCGAGG+AGG | 0.641700 | 4.2:-17533631 | MS.gene028308:intron |
| TGGCAATCAGGGTCTGAAAG+CGG | 0.643041 | 4.2:+17531418 | None:intergenic |
| TAGATTGATAAAGAACGTGC+TGG | 0.644130 | 4.2:-17534550 | MS.gene028308:CDS |
| TGACTGATCCAAGATCTGAT+GGG | 0.646479 | 4.2:-17533692 | MS.gene028308:CDS |
| AGACGCCGGTGTGTCACCCG+AGG | 0.647368 | 4.2:-17533634 | MS.gene028308:CDS |
| AGGAGCGGCAGTGGTGACGG+CGG | 0.651078 | 4.2:+17534970 | None:intergenic |
| ATCATTGCTGAATACTTGGG+AGG | 0.652856 | 4.2:-17533741 | MS.gene028308:CDS |
| CAGAGCAGTCTTGTAGACGC+CGG | 0.652992 | 4.2:-17533648 | MS.gene028308:CDS |
| GTGGTTCGAGTGGTGAAGGG+CGG | 0.658669 | 4.2:+17535068 | None:intergenic |
| GGTGACGGCGGAAGAGACGA+CGG | 0.668181 | 4.2:+17534982 | None:intergenic |
| CACCCATAACAAAACCATCA+CGG | 0.674295 | 4.2:+17534155 | None:intergenic |
| CAATAAAAGCCATAACAACA+GGG | 0.677458 | 4.2:-17532343 | MS.gene028308:CDS |
| AACCCTCAGAGCTAAACCCA+CGG | 0.685542 | 4.2:+17534774 | None:intergenic |
| GCTGCCAATCACATTCGTAG+GGG | 0.729757 | 4.2:-17534313 | MS.gene028308:CDS |
| TAAAAGCCATAACAACAGGG+TGG | 0.762513 | 4.2:-17532340 | MS.gene028308:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTCAATTACATAAATT+AGG | - | chr4.2:17533252-17533271 | MS.gene028308:intron | 10.0% |
| !! | TTTAATAAAAGTTAAATAAC+AGG | + | chr4.2:17534477-17534496 | None:intergenic | 10.0% |
| !!! | AACTTTTATATTGTTAATTA+AGG | + | chr4.2:17532474-17532493 | None:intergenic | 10.0% |
| !!! | AATATATTTAAAACATCAAT+CGG | - | chr4.2:17533608-17533627 | MS.gene028308:intron | 10.0% |
| !! | AAAATATTAATCAGACATTA+AGG | + | chr4.2:17533799-17533818 | None:intergenic | 15.0% |
| !! | ATAAATAAGGTTATATTGAA+CGG | + | chr4.2:17534443-17534462 | None:intergenic | 15.0% |
| !! | ATTAATTATAATTCTTACGA+AGG | + | chr4.2:17534543-17534562 | None:intergenic | 15.0% |
| !! | TTAAATATATTCTAATCACA+AGG | + | chr4.2:17533599-17533618 | None:intergenic | 15.0% |
| !!! | CCTGTTTTTTTTTTTTTTTT+GGG | - | chr4.2:17532670-17532689 | MS.gene028308:intron | 15.0% |
| !!! | GATTTAGAATTATTCTTTTT+TGG | + | chr4.2:17532609-17532628 | None:intergenic | 15.0% |
| !!! | TCCTGTTTTTTTTTTTTTTT+TGG | - | chr4.2:17532669-17532688 | MS.gene028308:intron | 15.0% |
| !!! | TTCAATATAACCTTATTTAT+TGG | - | chr4.2:17534443-17534462 | MS.gene028308:CDS | 15.0% |
| !! | AAAAAAATCCAAATCCAATT+AGG | + | chr4.2:17531948-17531967 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAATCCAATTA+GGG | + | chr4.2:17531947-17531966 | None:intergenic | 20.0% |
| !! | AGAAAAGCAATGAATTAAAT+GGG | + | chr4.2:17532992-17533011 | None:intergenic | 20.0% |
| !! | AGAACAATAACAAATCATTA+AGG | + | chr4.2:17532436-17532455 | None:intergenic | 20.0% |
| !! | ATAAAAGTTAAATAACAGGT+TGG | + | chr4.2:17534473-17534492 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr4.2:17532091-17532110 | None:intergenic | 20.0% |
| !! | CCCAAAAAAAAAAAAAAAAC+AGG | + | chr4.2:17532673-17532692 | None:intergenic | 20.0% |
| !! | TAAAAGTTAAATAACAGGTT+GGG | + | chr4.2:17534472-17534491 | None:intergenic | 20.0% |
| !! | TTAGTAAAATCAAAAACAGT+TGG | + | chr4.2:17533479-17533498 | None:intergenic | 20.0% |
| !!! | AATTCTTGTTTTTCATGATT+AGG | - | chr4.2:17534246-17534265 | MS.gene028308:CDS | 20.0% |
| !!! | ATGATTTGTTATTGTTCTTT+TGG | - | chr4.2:17532438-17532457 | MS.gene028308:intron | 20.0% |
| !!! | ATTTCAAATTCTTTTGGATT+TGG | - | chr4.2:17535060-17535079 | MS.gene028308:CDS | 20.0% |
| ! | AAAAGTTAAATAACAGGTTG+GGG | + | chr4.2:17534471-17534490 | None:intergenic | 25.0% |
| ! | AGAAAACGTAAAAGAAGAAA+AGG | - | chr4.2:17533383-17533402 | MS.gene028308:intron | 25.0% |
| ! | AGAGATTAATGCTATCAAAA+AGG | - | chr4.2:17533946-17533965 | MS.gene028308:intron | 25.0% |
| ! | AGTTAAGAATCTGATTGAAA+AGG | - | chr4.2:17532048-17532067 | MS.gene028308:intron | 25.0% |
| ! | ATTTAGTGGTATGATAAAAC+TGG | - | chr4.2:17533360-17533379 | MS.gene028308:intron | 25.0% |
| ! | CTTTCACTTTGCTAATTTAT+GGG | + | chr4.2:17533854-17533873 | None:intergenic | 25.0% |
| ! | GAGAAAAGCAATGAATTAAA+TGG | + | chr4.2:17532993-17533012 | None:intergenic | 25.0% |
| ! | GCAAACAAAATGATTACATA+TGG | + | chr4.2:17534850-17534869 | None:intergenic | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr4.2:17532163-17532182 | None:intergenic | 25.0% |
| ! | GTTAAGAATCTGATTGAAAA+GGG | - | chr4.2:17532049-17532068 | MS.gene028308:intron | 25.0% |
| ! | TATAAACTGATTATTTGCAG+AGG | + | chr4.2:17533658-17533677 | None:intergenic | 25.0% |
| ! | TATATCTGAATTGAACTGAA+CGG | - | chr4.2:17531919-17531938 | MS.gene028308:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr4.2:17532099-17532118 | MS.gene028308:intron | 25.0% |
| ! | TGTTTGTTTGTTCTGATATA+TGG | - | chr4.2:17534671-17534690 | MS.gene028308:CDS | 25.0% |
| ! | TTAATGATTTCTTTACTGTG+TGG | - | chr4.2:17534558-17534577 | MS.gene028308:intron | 25.0% |
| !! | AAATTTATAGCATTGAGTTC+TGG | - | chr4.2:17533197-17533216 | MS.gene028308:intron | 25.0% |
| !! | AACATATCATATCCTTTTAC+TGG | - | chr4.2:17534802-17534821 | MS.gene028308:CDS | 25.0% |
| !! | TACTATAACTTTAAAGGTGA+TGG | - | chr4.2:17532728-17532747 | MS.gene028308:intron | 25.0% |
| !! | TATATGGACTATCATGTTAT+TGG | - | chr4.2:17534687-17534706 | MS.gene028308:CDS | 25.0% |
| !! | TTAAACCTTATCGAGATTTT+CGG | + | chr4.2:17531872-17531891 | None:intergenic | 25.0% |
| !!! | ATACAGAAATTAACTTGTAG+AGG | + | chr4.2:17532697-17532716 | None:intergenic | 25.0% |
| AAAAATAGAGTAAGCTGGAA+AGG | + | chr4.2:17533031-17533050 | None:intergenic | 30.0% | |
| AAAACATCAATCGGATGTAA+GGG | - | chr4.2:17533617-17533636 | MS.gene028308:intron | 30.0% | |
| AACAGAAAAATAGAGTAAGC+TGG | + | chr4.2:17533036-17533055 | None:intergenic | 30.0% | |
| ACAATAAAAGCCATAACAAC+AGG | - | chr4.2:17534183-17534202 | MS.gene028308:CDS | 30.0% | |
| ACGTGATAAAGACCATAATT+TGG | - | chr4.2:17534999-17535018 | MS.gene028308:CDS | 30.0% | |
| ATAAAGACCATAATTTGGAC+TGG | - | chr4.2:17535004-17535023 | MS.gene028308:CDS | 30.0% | |
| ATTAGAATCAACTGAGAGAA+TGG | - | chr4.2:17534283-17534302 | MS.gene028308:CDS | 30.0% | |
| ATTATTGAAGGGAGAAACTA+AGG | - | chr4.2:17533431-17533450 | MS.gene028308:intron | 30.0% | |
| CAATAAAAGCCATAACAACA+GGG | - | chr4.2:17534184-17534203 | MS.gene028308:CDS | 30.0% | |
| GCCATATTTGTAATAGCATA+AGG | + | chr4.2:17532103-17532122 | None:intergenic | 30.0% | |
| GCTTTCACTTTGCTAATTTA+TGG | + | chr4.2:17533855-17533874 | None:intergenic | 30.0% | |
| GGGTTTCATTTCTAATCATA+TGG | - | chr4.2:17534756-17534775 | MS.gene028308:CDS | 30.0% | |
| GGTTATATTGAACGGAAAAA+AGG | + | chr4.2:17534435-17534454 | None:intergenic | 30.0% | |
| TAAAACATCAATCGGATGTA+AGG | - | chr4.2:17533616-17533635 | MS.gene028308:intron | 30.0% | |
| TCAATGACATGATAATACCT+TGG | + | chr4.2:17534008-17534027 | None:intergenic | 30.0% | |
| TTAGAATCAACTGAGAGAAT+GGG | - | chr4.2:17534284-17534303 | MS.gene028308:CDS | 30.0% | |
| TTAGTTACCAGTCCAAATTA+TGG | + | chr4.2:17535014-17535033 | None:intergenic | 30.0% | |
| ! | AAGTGGAAAGACAATTTGTT+AGG | - | chr4.2:17533735-17533754 | MS.gene028308:CDS | 30.0% |
| ! | ATGAAAGTTAATTTGAGACC+AGG | + | chr4.2:17534379-17534398 | None:intergenic | 30.0% |
| ! | TCAAATTCTTTTGGATTTGG+TGG | - | chr4.2:17535063-17535082 | MS.gene028308:CDS | 30.0% |
| ! | TGTGTGTTTTCAACATCTTT+TGG | - | chr4.2:17533075-17533094 | MS.gene028308:intron | 30.0% |
| ! | TGTTGTTATGGCTTTTATTG+TGG | + | chr4.2:17534184-17534203 | None:intergenic | 30.0% |
| ! | TTTCAACATCTTTTGGTACA+CGG | - | chr4.2:17533082-17533101 | MS.gene028308:intron | 30.0% |
| !! | ATAGTGAGAGCATTATTGAA+GGG | - | chr4.2:17533420-17533439 | MS.gene028308:intron | 30.0% |
| !! | CATGTCATTTGCTTCTTTTT+AGG | - | chr4.2:17533874-17533893 | MS.gene028308:intron | 30.0% |
| !! | CATTAATTTTGATGCCAGAA+GGG | + | chr4.2:17533982-17534001 | None:intergenic | 30.0% |
| !! | CGAGAGTACTATAACTTTAA+AGG | - | chr4.2:17532722-17532741 | MS.gene028308:intron | 30.0% |
| !! | TGATTACATATGGTTCTGAA+AGG | + | chr4.2:17534840-17534859 | None:intergenic | 30.0% |
| !! | TGTAATCATTTTGTTTGCCT+TGG | - | chr4.2:17534852-17534871 | MS.gene028308:CDS | 30.0% |
| !!! | CTTTTTTGGATCATGTACAA+AGG | + | chr4.2:17532595-17532614 | None:intergenic | 30.0% |
| !!! | GTTATTTTTGATTCATTCCC+TGG | - | chr4.2:17534073-17534092 | MS.gene028308:intron | 30.0% |
| AAACATCAATCGGATGTAAG+GGG | - | chr4.2:17533618-17533637 | MS.gene028308:intron | 35.0% | |
| AAACTGATTATTTGCAGAGG+AGG | + | chr4.2:17533655-17533674 | None:intergenic | 35.0% | |
| AAGCTGCTAGCATAAATAAG+TGG | - | chr4.2:17533718-17533737 | MS.gene028308:CDS | 35.0% | |
| AATATGGCTTCAGCTTTACT+TGG | - | chr4.2:17532115-17532134 | MS.gene028308:intron | 35.0% | |
| AATCAGATTCTTAACTCCGT+CGG | + | chr4.2:17532044-17532063 | None:intergenic | 35.0% | |
| ACAGCATATGCATCAGTTAA+TGG | + | chr4.2:17534099-17534118 | None:intergenic | 35.0% | |
| ACCACGTGAGTAAAAAGAAA+AGG | + | chr4.2:17534647-17534666 | None:intergenic | 35.0% | |
| ACCTATCATTGCTGAATACT+TGG | - | chr4.2:17532782-17532801 | MS.gene028308:intron | 35.0% | |
| ACGTGAAATGAAAAATGCAC+TGG | + | chr4.2:17534983-17535002 | None:intergenic | 35.0% | |
| ATAAAACAGAAAGCTTTCGC+TGG | + | chr4.2:17534041-17534060 | None:intergenic | 35.0% | |
| ATATGGCTTCAGCTTTACTT+GGG | - | chr4.2:17532116-17532135 | MS.gene028308:intron | 35.0% | |
| ATGACATGATAATACCTTGG+TGG | + | chr4.2:17534005-17534024 | None:intergenic | 35.0% | |
| CAGCAGCATGAAATTAATGT+TGG | - | chr4.2:17534934-17534953 | MS.gene028308:CDS | 35.0% | |
| CATCAAAATTAATGCCACCA+AGG | - | chr4.2:17533988-17534007 | MS.gene028308:intron | 35.0% | |
| CATTCATCAGGTCAAATAGA+GGG | - | chr4.2:17533692-17533711 | MS.gene028308:CDS | 35.0% | |
| CCTATCATTGCTGAATACTT+GGG | - | chr4.2:17532783-17532802 | MS.gene028308:intron | 35.0% | |
| CGTACGAATTGATTGATTGA+TGG | + | chr4.2:17534219-17534238 | None:intergenic | 35.0% | |
| TAGATTGATAAAGAACGTGC+TGG | - | chr4.2:17531977-17531996 | MS.gene028308:intron | 35.0% | |
| TAGTTACTTGCTCATTCATC+AGG | - | chr4.2:17533680-17533699 | MS.gene028308:CDS | 35.0% | |
| TCATTCATCAGGTCAAATAG+AGG | - | chr4.2:17533691-17533710 | MS.gene028308:CDS | 35.0% | |
| TGATGAATGAGCAAGTAACT+AGG | + | chr4.2:17533681-17533700 | None:intergenic | 35.0% | |
| TGCCTGGAAGAAAGAAAAAA+AGG | + | chr4.2:17535041-17535060 | None:intergenic | 35.0% | |
| TGTGATACCAGTCTATGATA+GGG | - | chr4.2:17534121-17534140 | MS.gene028308:intron | 35.0% | |
| ! | ACCTTTTCTTTTTACTCACG+TGG | - | chr4.2:17534643-17534662 | MS.gene028308:intron | 35.0% |
| ! | AGAGAATGGGCTTTCATTAT+TGG | - | chr4.2:17534297-17534316 | MS.gene028308:CDS | 35.0% |
| ! | CCAAAAGAATTTGAAATGCC+TGG | + | chr4.2:17535057-17535076 | None:intergenic | 35.0% |
| ! | CCAGGCATTTCAAATTCTTT+TGG | - | chr4.2:17535054-17535073 | MS.gene028308:CDS | 35.0% |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr4.2:17532127-17532146 | MS.gene028308:intron | 35.0% |
| ! | TCTGTTTTATAGATCATCGC+AGG | - | chr4.2:17534051-17534070 | MS.gene028308:intron | 35.0% |
| ! | TGCCATTATTCCTATTGGTT+TGG | - | chr4.2:17532273-17532292 | MS.gene028308:intron | 35.0% |
| ! | TGGGATTGATTTAGGTTTCA+GGG | - | chr4.2:17532135-17532154 | MS.gene028308:intron | 35.0% |
| ! | TGTCTTGTATTTCTGCATAC+TGG | - | chr4.2:17533514-17533533 | MS.gene028308:intron | 35.0% |
| ! | TTGGGATTGATTTAGGTTTC+AGG | - | chr4.2:17532134-17532153 | MS.gene028308:intron | 35.0% |
| ! | TTTCACGAAGTGTCTATAAG+TGG | - | chr4.2:17532632-17532651 | MS.gene028308:CDS | 35.0% |
| ! | TTTTGGTACACGGTACAATA+GGG | - | chr4.2:17533092-17533111 | MS.gene028308:intron | 35.0% |
| !! | AATTTGGACTGGTAACTAAC+TGG | - | chr4.2:17535015-17535034 | MS.gene028308:CDS | 35.0% |
| !! | ATGGTTCTGAAAGGCAAAAT+AGG | + | chr4.2:17534831-17534850 | None:intergenic | 35.0% |
| !! | ATTATTCCTATTGGTTTGGG+GGG | - | chr4.2:17532277-17532296 | MS.gene028308:intron | 35.0% |
| !! | CATAGTGAGAGCATTATTGA+AGG | - | chr4.2:17533419-17533438 | MS.gene028308:intron | 35.0% |
| !! | CATTATTCCTATTGGTTTGG+GGG | - | chr4.2:17532276-17532295 | MS.gene028308:intron | 35.0% |
| !! | CCATTATTCCTATTGGTTTG+GGG | - | chr4.2:17532275-17532294 | MS.gene028308:intron | 35.0% |
| !! | GCATTAATTTTGATGCCAGA+AGG | + | chr4.2:17533983-17534002 | None:intergenic | 35.0% |
| !! | GCCATTATTCCTATTGGTTT+GGG | - | chr4.2:17532274-17532293 | MS.gene028308:intron | 35.0% |
| AACGGATCCCTAATTGGATT+TGG | - | chr4.2:17531937-17531956 | MS.gene028308:intron | 40.0% | |
| ACGGTATCAAAATCAACTGC+AGG | + | chr4.2:17534901-17534920 | None:intergenic | 40.0% | |
| ACTATGGCGTTAGCATTTAG+TGG | - | chr4.2:17533346-17533365 | MS.gene028308:intron | 40.0% | |
| AGAGTAAGACAATACCTCCT+CGG | + | chr4.2:17532913-17532932 | None:intergenic | 40.0% | |
| ATATGCATCAGTTAATGGCC+AGG | + | chr4.2:17534094-17534113 | None:intergenic | 40.0% | |
| ATCATTGCTGAATACTTGGG+AGG | - | chr4.2:17532786-17532805 | MS.gene028308:intron | 40.0% | |
| ATCTTCAAGTGCTTTCTTCC+CGG | + | chr4.2:17531836-17531855 | None:intergenic | 40.0% | |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr4.2:17532335-17532354 | MS.gene028308:CDS | 40.0% | |
| ATGACTGATCCAAGATCTGA+TGG | - | chr4.2:17532834-17532853 | MS.gene028308:intron | 40.0% | |
| ATGCTTCCAAATTCCCTACT+CGG | - | chr4.2:17531716-17531735 | MS.gene028308:intron | 40.0% | |
| CAAAATAGGAGGCCAGTAAA+AGG | + | chr4.2:17534817-17534836 | None:intergenic | 40.0% | |
| CACCCATAACAAAACCATCA+CGG | + | chr4.2:17532375-17532394 | None:intergenic | 40.0% | |
| CCCAAGTATTCAGCAATGAT+AGG | + | chr4.2:17532786-17532805 | None:intergenic | 40.0% | |
| CCCCAAACCAATAGGAATAA+TGG | + | chr4.2:17532278-17532297 | None:intergenic | 40.0% | |
| CTGTGATACCAGTCTATGAT+AGG | - | chr4.2:17534120-17534139 | MS.gene028308:intron | 40.0% | |
| CTTAGCAACAGCTTTACAAG+AGG | + | chr4.2:17533150-17533169 | None:intergenic | 40.0% | |
| GAAGCTGCCATTATTCCTAT+TGG | - | chr4.2:17532268-17532287 | MS.gene028308:intron | 40.0% | |
| GACAAATCAACATGCAGCAA+TGG | + | chr4.2:17533761-17533780 | None:intergenic | 40.0% | |
| GCTAACATAATGTAGCATCC+TGG | + | chr4.2:17533554-17533573 | None:intergenic | 40.0% | |
| GGAAAGGAAAAACACACTGA+AGG | + | chr4.2:17533015-17533034 | None:intergenic | 40.0% | |
| GTCAAGCCAAGATTTCTTAG+AGG | + | chr4.2:17533457-17533476 | None:intergenic | 40.0% | |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr4.2:17532342-17532361 | MS.gene028308:CDS | 40.0% | |
| TAAAAGCCATAACAACAGGG+TGG | - | chr4.2:17534187-17534206 | MS.gene028308:CDS | 40.0% | |
| TATGCATCAGTTAATGGCCA+GGG | + | chr4.2:17534093-17534112 | None:intergenic | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr4.2:17534895-17534914 | None:intergenic | 40.0% | |
| TGACTGATCCAAGATCTGAT+GGG | - | chr4.2:17532835-17532854 | MS.gene028308:intron | 40.0% | |
| TTTGGTACACGGTACAATAG+GGG | - | chr4.2:17533093-17533112 | MS.gene028308:intron | 40.0% | |
| TTTGTTTGCCTTGGTCTCTT+TGG | - | chr4.2:17534861-17534880 | MS.gene028308:CDS | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr4.2:17532342-17532361 | None:intergenic | 40.0% |
| ! | ACATTTTATCTGCCACCTCT+TGG | - | chr4.2:17534345-17534364 | MS.gene028308:CDS | 40.0% |
| ! | CTAAGGCCTCTAAGAAATCT+TGG | - | chr4.2:17533448-17533467 | MS.gene028308:intron | 40.0% |
| ! | CTTTTGGTACACGGTACAAT+AGG | - | chr4.2:17533091-17533110 | MS.gene028308:intron | 40.0% |
| ! | GGGATTGATTTAGGTTTCAG+GGG | - | chr4.2:17532136-17532155 | MS.gene028308:intron | 40.0% |
| ! | GGTTGGGGTACCAATAAATA+AGG | + | chr4.2:17534456-17534475 | None:intergenic | 40.0% |
| ! | GTGGGATCACATTGATTGAT+AGG | - | chr4.2:17531689-17531708 | MS.gene028308:intron | 40.0% |
| ! | TTTTGTGGGGTGGATAAAAG+AGG | - | chr4.2:17534727-17534746 | MS.gene028308:CDS | 40.0% |
| !! | AAGAAAGCACTTGAAGATGC+TGG | - | chr4.2:17531838-17531857 | MS.gene028308:intron | 40.0% |
| !! | AAGGTTTTCAAGAACCCTTC+TGG | - | chr4.2:17533965-17533984 | MS.gene028308:intron | 40.0% |
| !! | GGTGGATAAAAGAGGTGTTT+GGG | - | chr4.2:17534735-17534754 | MS.gene028308:CDS | 40.0% |
| !! | GTGGATAAAAGAGGTGTTTG+GGG | - | chr4.2:17534736-17534755 | MS.gene028308:CDS | 40.0% |
| !! | GTTCTGAAAGGCAAAATAGG+AGG | + | chr4.2:17534828-17534847 | None:intergenic | 40.0% |
| !! | TAAAGAACGTGCTGGTGTTT+TGG | - | chr4.2:17531985-17532004 | MS.gene028308:intron | 40.0% |
| !! | TGCAGTTGATTTTGATACCG+TGG | - | chr4.2:17534900-17534919 | MS.gene028308:CDS | 40.0% |
| !!! | AGACCGTGATGGTTTTGTTA+TGG | - | chr4.2:17532369-17532388 | MS.gene028308:CDS | 40.0% |
| !!! | GACCGTGATGGTTTTGTTAT+GGG | - | chr4.2:17532370-17532389 | MS.gene028308:CDS | 40.0% |
| !!! | GATGGTTTTGTTATGGGTGA+AGG | - | chr4.2:17532376-17532395 | MS.gene028308:CDS | 40.0% |
| !!! | GGCCTTTTTTTCTTTCTTCC+AGG | - | chr4.2:17535036-17535055 | MS.gene028308:CDS | 40.0% |
| !!! | TCAAGTCGCGTTGTTTTTGT+GGG | - | chr4.2:17534713-17534732 | MS.gene028308:CDS | 40.0% |
| ACAAAACCCCCCAAACCAAT+AGG | + | chr4.2:17532286-17532305 | None:intergenic | 45.0% | |
| ATTCTGCACCAAAGAGACCA+AGG | + | chr4.2:17534872-17534891 | None:intergenic | 45.0% | |
| CATGCAACTTCCACTCTTGT+TGG | - | chr4.2:17533914-17533933 | MS.gene028308:intron | 45.0% | |
| CATGTAAAGCTGTCTGCACA+CGG | - | chr4.2:17533300-17533319 | MS.gene028308:intron | 45.0% | |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr4.2:17532341-17532360 | MS.gene028308:CDS | 45.0% | |
| GAACTGAACGGATCCCTAAT+TGG | - | chr4.2:17531931-17531950 | MS.gene028308:intron | 45.0% | |
| GAGTAAGACAATACCTCCTC+GGG | + | chr4.2:17532912-17532931 | None:intergenic | 45.0% | |
| GTCAGGAATGGGTGGTTTAA+CGG | - | chr4.2:17532012-17532031 | MS.gene028308:intron | 45.0% | |
| TCTGCCACCTCTTGGAATAA+TGG | - | chr4.2:17534353-17534372 | MS.gene028308:CDS | 45.0% | |
| TGCTGCCAATCACATTCGTA+GGG | - | chr4.2:17532213-17532232 | MS.gene028308:intron | 45.0% | |
| TTGGGATCCTTCTCTCTTTG+AGG | + | chr4.2:17531580-17531599 | None:intergenic | 45.0% | |
| ! | ATCCTTCTCTCTTTGAGGAG+CGG | + | chr4.2:17531575-17531594 | None:intergenic | 45.0% |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr4.2:17532343-17532362 | None:intergenic | 45.0% |
| ! | GGTTTAACGGTGTTTTCCGA+CGG | - | chr4.2:17532025-17532044 | MS.gene028308:intron | 45.0% |
| ! | TTTGTTATGGGTGAAGGTGC+TGG | - | chr4.2:17532382-17532401 | MS.gene028308:CDS | 45.0% |
| !! | CTGGTATCGATATCAGTACC+AGG | - | chr4.2:17533533-17533552 | MS.gene028308:intron | 45.0% |
| !! | GGGTGGATAAAAGAGGTGTT+TGG | - | chr4.2:17534734-17534753 | MS.gene028308:CDS | 45.0% |
| !! | TGAGGCCGATTTGATGATTG+CGG | - | chr4.2:17532237-17532256 | MS.gene028308:intron | 45.0% |
| !! | TTCCACTCTTGTTGGTGACT+TGG | - | chr4.2:17533922-17533941 | MS.gene028308:intron | 45.0% |
| !!! | AACGTGCTGGTGTTTTGGTT+GGG | - | chr4.2:17531990-17532009 | MS.gene028308:intron | 45.0% |
| !!! | AAGGTGCTGGAGTTTTGGTA+AGG | - | chr4.2:17532395-17532414 | MS.gene028308:CDS | 45.0% |
| !!! | CAAGTCGCGTTGTTTTTGTG+GGG | - | chr4.2:17534714-17534733 | MS.gene028308:CDS | 45.0% |
| !!! | CGGCATTGGAGGATTTTTTG+CGG | + | chr4.2:17531486-17531505 | None:intergenic | 45.0% |
| !!! | GTCAAGTCGCGTTGTTTTTG+TGG | - | chr4.2:17534712-17534731 | MS.gene028308:CDS | 45.0% |
| !!! | GTTTTGGTTGGGTCAGGAAT+GGG | - | chr4.2:17532001-17532020 | MS.gene028308:intron | 45.0% |
| !!! | TGTTTTGGTTGGGTCAGGAA+TGG | - | chr4.2:17532000-17532019 | MS.gene028308:intron | 45.0% |
| !!! | TTGGAGGATTTTTTGCGGAG+TGG | + | chr4.2:17531481-17531500 | None:intergenic | 45.0% |
| AAAACAGGACACACGCGACA+TGG | + | chr4.2:17532658-17532677 | None:intergenic | 50.0% | |
| AACCCTCAGAGCTAAACCCA+CGG | + | chr4.2:17531756-17531775 | None:intergenic | 50.0% | |
| ACATCGACGGGAAGAATGAC+CGG | - | chr4.2:17531776-17531795 | MS.gene028308:intron | 50.0% | |
| AGACGACGGAGAGTCTCTTT+GGG | + | chr4.2:17531534-17531553 | None:intergenic | 50.0% | |
| AGTGATCACGACACGCTTCT+TGG | + | chr4.2:17531599-17531618 | None:intergenic | 50.0% | |
| ATGCAGCCACCCTGTTGTTA+TGG | + | chr4.2:17534196-17534215 | None:intergenic | 50.0% | |
| CAATCACATTCGTAGGGGTG+AGG | - | chr4.2:17532219-17532238 | MS.gene028308:intron | 50.0% | |
| CAATGTGATCCCACTCTCAC+CGG | + | chr4.2:17531683-17531702 | None:intergenic | 50.0% | |
| CACCTCTTGGAATAATGGCC+TGG | - | chr4.2:17534358-17534377 | MS.gene028308:CDS | 50.0% | |
| CAGGCCATTATTCCAAGAGG+TGG | + | chr4.2:17534360-17534379 | None:intergenic | 50.0% | |
| CCATCACGGTCTTTATCCCA+AGG | + | chr4.2:17532361-17532380 | None:intergenic | 50.0% | |
| CCCACCCGCAATCATCAAAT+CGG | + | chr4.2:17532245-17532264 | None:intergenic | 50.0% | |
| CCTTGGGATAAAGACCGTGA+TGG | - | chr4.2:17532358-17532377 | MS.gene028308:CDS | 50.0% | |
| CTCACCCCTACGAATGTGAT+TGG | + | chr4.2:17532221-17532240 | None:intergenic | 50.0% | |
| CTCGCTTCATGGCATGTTCA+AGG | + | chr4.2:17532758-17532777 | None:intergenic | 50.0% | |
| CTGCTGCCAATCACATTCGT+AGG | - | chr4.2:17532212-17532231 | MS.gene028308:intron | 50.0% | |
| CTTGAACATGCCATGAAGCG+AGG | - | chr4.2:17532756-17532775 | MS.gene028308:intron | 50.0% | |
| GACCAGGCCATTATTCCAAG+AGG | + | chr4.2:17534363-17534382 | None:intergenic | 50.0% | |
| GCTGCCAATCACATTCGTAG+GGG | - | chr4.2:17532214-17532233 | MS.gene028308:intron | 50.0% | |
| GGAGACAATCATCCTGTCTC+CGG | + | chr4.2:17531798-17531817 | None:intergenic | 50.0% | |
| GGAGACAGGATGATTGTCTC+CGG | - | chr4.2:17531797-17531816 | MS.gene028308:intron | 50.0% | |
| GTACACGGTACAATAGGGGA+TGG | - | chr4.2:17533097-17533116 | MS.gene028308:intron | 50.0% | |
| GTGATCACGACACGCTTCTT+GGG | + | chr4.2:17531598-17531617 | None:intergenic | 50.0% | |
| TAAAGCTGTCTGCACACGGT+GGG | - | chr4.2:17533304-17533323 | MS.gene028308:intron | 50.0% | |
| TGCCAAGTCACCAACAAGAG+TGG | + | chr4.2:17533927-17533946 | None:intergenic | 50.0% | |
| TGCGAACCGAGTAGGGAATT+TGG | + | chr4.2:17531725-17531744 | None:intergenic | 50.0% | |
| TGTGGGAAGGAGTAGCACTA+TGG | - | chr4.2:17533330-17533349 | MS.gene028308:intron | 50.0% | |
| TTCTACGAGAAGCTTCTCGC+CGG | - | chr4.2:17531661-17531680 | MS.gene028308:intron | 50.0% | |
| ! | AAATTCCCTACTCGGTTCGC+AGG | - | chr4.2:17531724-17531743 | MS.gene028308:intron | 50.0% |
| ! | AAGAAGCGTGTCGTGATCAC+TGG | - | chr4.2:17531598-17531617 | MS.gene028308:CDS | 50.0% |
| ! | CCGATTTGATGATTGCGGGT+GGG | - | chr4.2:17532242-17532261 | MS.gene028308:intron | 50.0% |
| ! | CGGTGCCGAAAATCTCGATA+AGG | - | chr4.2:17531864-17531883 | MS.gene028308:intron | 50.0% |
| ! | CTGCTGCTTGACATTTGCCA+CGG | + | chr4.2:17534920-17534939 | None:intergenic | 50.0% |
| ! | GCACTTGAAGATGCTGGTCT+CGG | - | chr4.2:17531844-17531863 | MS.gene028308:intron | 50.0% |
| ! | TTTTTGCGGAGTGGTTCGAG+TGG | + | chr4.2:17531472-17531491 | None:intergenic | 50.0% |
| !! | AGCTCTGAGGGTTACATCGA+CGG | - | chr4.2:17531763-17531782 | MS.gene028308:intron | 50.0% |
| !! | ATCCGTGGGTTTAGCTCTGA+GGG | - | chr4.2:17531751-17531770 | MS.gene028308:intron | 50.0% |
| !! | GAGGCCGATTTGATGATTGC+GGG | - | chr4.2:17532238-17532257 | MS.gene028308:intron | 50.0% |
| !! | GATCCAAGATCTGATGGGCT+TGG | - | chr4.2:17532840-17532859 | MS.gene028308:intron | 50.0% |
| !! | TCTATGATAGGGCACTGCCT+TGG | - | chr4.2:17534132-17534151 | MS.gene028308:intron | 50.0% |
| !!! | GAACGTGCTGGTGTTTTGGT+TGG | - | chr4.2:17531989-17532008 | MS.gene028308:intron | 50.0% |
| !!! | GAGTCTCTTTGGGGTTTTGG+CGG | + | chr4.2:17531524-17531543 | None:intergenic | 50.0% |
| !!! | GGAGAGTCTCTTTGGGGTTT+TGG | + | chr4.2:17531527-17531546 | None:intergenic | 50.0% |
| AAAGCTGTCTGCACACGGTG+GGG | - | chr4.2:17533305-17533324 | MS.gene028308:intron | 55.0% | |
| ACGCCAAGCCCATCAGATCT+TGG | + | chr4.2:17532846-17532865 | None:intergenic | 55.0% | |
| ATCTGACCTGCGAACCGAGT+AGG | + | chr4.2:17531733-17531752 | None:intergenic | 55.0% | |
| ATGGGTGGCGTCACTGTACA+TGG | - | chr4.2:17531622-17531641 | MS.gene028308:CDS | 55.0% | |
| CGGTACAATAGGGGATGGCA+TGG | - | chr4.2:17533102-17533121 | MS.gene028308:intron | 55.0% | |
| CGTGTCGTGATCACTGGCAT+GGG | - | chr4.2:17531604-17531623 | MS.gene028308:CDS | 55.0% | |
| GACGACGGAGAGTCTCTTTG+GGG | + | chr4.2:17531533-17531552 | None:intergenic | 55.0% | |
| GAGACGACGGAGAGTCTCTT+TGG | + | chr4.2:17531535-17531554 | None:intergenic | 55.0% | |
| GATAGGTGCACCTCGCTTCA+TGG | + | chr4.2:17532769-17532788 | None:intergenic | 55.0% | |
| GGAGTGGTTCGAGTGGTGAA+GGG | + | chr4.2:17531465-17531484 | None:intergenic | 55.0% | |
| GGCAGTGCCCTATCATAGAC+TGG | + | chr4.2:17534131-17534150 | None:intergenic | 55.0% | |
| GTAAAGCTGTCTGCACACGG+TGG | - | chr4.2:17533303-17533322 | MS.gene028308:intron | 55.0% | |
| TCGGATGTAAGGGGCCAAGT+TGG | - | chr4.2:17533627-17533646 | MS.gene028308:intron | 55.0% | |
| TCTGACCTGCGAACCGAGTA+GGG | + | chr4.2:17531732-17531751 | None:intergenic | 55.0% | |
| TGCCGCTCCTCAAAGAGAGA+AGG | - | chr4.2:17531570-17531589 | MS.gene028308:intron | 55.0% | |
| TTGGTTGGGTCAGGAATGGG+TGG | - | chr4.2:17532004-17532023 | MS.gene028308:intron | 55.0% | |
| ! | CAGAGCAGTCTTGTAGACGC+CGG | - | chr4.2:17532879-17532898 | MS.gene028308:intron | 55.0% |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr4.2:17535080-17535099 | MS.gene028308:CDS | 55.0% |
| !! | GATCCGTGGGTTTAGCTCTG+AGG | - | chr4.2:17531750-17531769 | MS.gene028308:intron | 55.0% |
| !! | GCCGATTTGATGATTGCGGG+TGG | - | chr4.2:17532241-17532260 | MS.gene028308:intron | 55.0% |
| !! | GCTCTGAGGGTTACATCGAC+GGG | - | chr4.2:17531764-17531783 | MS.gene028308:intron | 55.0% |
| !! | TTGCAGAGGAGGCACCAACT+TGG | + | chr4.2:17533644-17533663 | None:intergenic | 55.0% |
| !!! | GCTGGTGTTTTGGTTGGGTC+AGG | - | chr4.2:17531995-17532014 | MS.gene028308:intron | 55.0% |
| !!! | GGGTGAAGGTGCTGGAGTTT+TGG | - | chr4.2:17532390-17532409 | MS.gene028308:CDS | 55.0% |
| !!! | GTCGCGTTGTTTTTGTGGGG+TGG | - | chr4.2:17534717-17534736 | MS.gene028308:CDS | 55.0% |
| !!! | TCTCTTTGGGGTTTTGGCGG+TGG | + | chr4.2:17531521-17531540 | None:intergenic | 55.0% |
| AAGCTTCTCGCCGGTGAGAG+TGG | - | chr4.2:17531670-17531689 | MS.gene028308:intron | 60.0% | |
| AGCTTCTCGCCGGTGAGAGT+GGG | - | chr4.2:17531671-17531690 | MS.gene028308:intron | 60.0% | |
| CGGAGTGGTTCGAGTGGTGA+AGG | + | chr4.2:17531466-17531485 | None:intergenic | 60.0% | |
| CGGCGTCTACAAGACTGCTC+TGG | + | chr4.2:17532881-17532900 | None:intergenic | 60.0% | |
| CGGGAAGAATGACCGGAGAC+AGG | - | chr4.2:17531783-17531802 | MS.gene028308:intron | 60.0% | |
| CTCCGGTACTGCAATGTCGC+CGG | - | chr4.2:17531814-17531833 | MS.gene028308:intron | 60.0% | |
| GCGTGTCGTGATCACTGGCA+TGG | - | chr4.2:17531603-17531622 | MS.gene028308:CDS | 60.0% | |
| GGTGAAGGGCGGAGAGTGAA+GGG | + | chr4.2:17531451-17531470 | None:intergenic | 60.0% | |
| GGTTCGCAGGTCAGATCCGT+GGG | - | chr4.2:17531737-17531756 | MS.gene028308:intron | 60.0% | |
| GTCGTGATCACTGGCATGGG+TGG | - | chr4.2:17531607-17531626 | MS.gene028308:CDS | 60.0% | |
| GTGGTTCGAGTGGTGAAGGG+CGG | + | chr4.2:17531462-17531481 | None:intergenic | 60.0% | |
| TACCTCCTCGGGTGACACAC+CGG | + | chr4.2:17532901-17532920 | None:intergenic | 60.0% | |
| TCCCGGCGACATTGCAGTAC+CGG | + | chr4.2:17531819-17531838 | None:intergenic | 60.0% | |
| TCCGGTACTGCAATGTCGCC+GGG | - | chr4.2:17531815-17531834 | MS.gene028308:intron | 60.0% | |
| TGGTGAAGGGCGGAGAGTGA+AGG | + | chr4.2:17531452-17531471 | None:intergenic | 60.0% | |
| TTGAGGAGCGGCAGTGGTGA+CGG | + | chr4.2:17531563-17531582 | None:intergenic | 60.0% | |
| ! | CTCTCTTTGAGGAGCGGCAG+TGG | + | chr4.2:17531569-17531588 | None:intergenic | 60.0% |
| !!! | CTTTGGGGTTTTGGCGGTGG+TGG | + | chr4.2:17531518-17531537 | None:intergenic | 60.0% |
| ACACGGTGGGGTGTGTGGGA+AGG | - | chr4.2:17533317-17533336 | MS.gene028308:intron | 65.0% | |
| CGGTTCGCAGGTCAGATCCG+TGG | - | chr4.2:17531736-17531755 | MS.gene028308:intron | 65.0% | |
| CTGCACACGGTGGGGTGTGT+GGG | - | chr4.2:17533313-17533332 | MS.gene028308:intron | 65.0% | |
| TCTGCACACGGTGGGGTGTG+TGG | - | chr4.2:17533312-17533331 | MS.gene028308:intron | 65.0% | |
| ! | GGTGACGGCGGAAGAGACGA+CGG | + | chr4.2:17531548-17531567 | None:intergenic | 65.0% |
| !! | TGGGGTTTTGGCGGTGGTGG+TGG | + | chr4.2:17531515-17531534 | None:intergenic | 65.0% |
| !!! | GGTTTTGGCGGTGGTGGTGG+CGG | + | chr4.2:17531512-17531531 | None:intergenic | 65.0% |
| AGACGCCGGTGTGTCACCCG+AGG | - | chr4.2:17532893-17532912 | MS.gene028308:intron | 70.0% | |
| CACTGCCTTGGCGCAGCTGG+GGG | - | chr4.2:17534144-17534163 | MS.gene028308:CDS | 70.0% | |
| CCAAACCCCCAGCTGCGCCA+AGG | + | chr4.2:17534152-17534171 | None:intergenic | 70.0% | |
| CCTTGGCGCAGCTGGGGGTT+TGG | - | chr4.2:17534149-17534168 | MS.gene028308:CDS | 70.0% | |
| GCACTGCCTTGGCGCAGCTG+GGG | - | chr4.2:17534143-17534162 | MS.gene028308:CDS | 70.0% | |
| GGCACTGCCTTGGCGCAGCT+GGG | - | chr4.2:17534142-17534161 | MS.gene028308:CDS | 70.0% | |
| !! | AGGAGCGGCAGTGGTGACGG+CGG | + | chr4.2:17531560-17531579 | None:intergenic | 70.0% |
| !! | TTTGGCGGTGGTGGTGGCGG+CGG | + | chr4.2:17531509-17531528 | None:intergenic | 70.0% |
| CGCCGGTGTGTCACCCGAGG+AGG | - | chr4.2:17532896-17532915 | MS.gene028308:intron | 75.0% | |
| ! | GGGCACTGCCTTGGCGCAGC+TGG | - | chr4.2:17534141-17534160 | MS.gene028308:CDS | 75.0% |
| !! | GGTGGCGGCGGCGGCATTGG+AGG | + | chr4.2:17531497-17531516 | None:intergenic | 80.0% |
| !!! | GGTGGTGGCGGCGGCGGCAT+TGG | + | chr4.2:17531500-17531519 | None:intergenic | 80.0% |
| !!! | GGCGGTGGTGGTGGCGGCGG+CGG | + | chr4.2:17531506-17531525 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 17531424 | 17535125 | 17531424 | ID=MS.gene028308 |
| chr4.2 | mRNA | 17531424 | 17535125 | 17531424 | ID=MS.gene028308.t1;Parent=MS.gene028308 |
| chr4.2 | exon | 17534664 | 17535125 | 17534664 | ID=MS.gene028308.t1.exon1;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17534664 | 17535125 | 17534664 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17534138 | 17534569 | 17534138 | ID=MS.gene028308.t1.exon2;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17534138 | 17534569 | 17534138 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17533632 | 17533805 | 17533632 | ID=MS.gene028308.t1.exon3;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17533632 | 17533805 | 17533632 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17532540 | 17532653 | 17532540 | ID=MS.gene028308.t1.exon4;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17532540 | 17532653 | 17532540 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17532316 | 17532417 | 17532316 | ID=MS.gene028308.t1.exon5;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17532316 | 17532417 | 17532316 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17531594 | 17531660 | 17531594 | ID=MS.gene028308.t1.exon6;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17531594 | 17531660 | 17531594 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| chr4.2 | exon | 17531424 | 17531491 | 17531424 | ID=MS.gene028308.t1.exon7;Parent=MS.gene028308.t1 |
| chr4.2 | CDS | 17531424 | 17531491 | 17531424 | ID=cds.MS.gene028308.t1;Parent=MS.gene028308.t1 |
| Gene Sequence |
| Protein sequence |
