Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028913.t1 | XP_013465083.1 | 96.4 | 247 | 9 | 0 | 1 | 247 | 1 | 247 | 5.30E-140 | 506.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028913.t1 | Q6R567 | 48.8 | 250 | 111 | 7 | 11 | 247 | 7 | 252 | 5.6e-58 | 225.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028913.t1 | A0A072VCD2 | 96.4 | 247 | 9 | 0 | 1 | 247 | 1 | 247 | 3.8e-140 | 506.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene032302 | MS.gene028913 | PPI |
MS.gene36072 | MS.gene028913 | PPI |
MS.gene34211 | MS.gene028913 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028913.t1 | MTR_2g090295 | 96.356 | 247 | 9 | 0 | 1 | 247 | 1 | 247 | 0.0 | 504 |
MS.gene028913.t1 | MTR_8g465910 | 57.255 | 255 | 90 | 7 | 1 | 247 | 1 | 244 | 4.25e-98 | 286 |
MS.gene028913.t1 | MTR_2g013550 | 41.038 | 212 | 95 | 5 | 37 | 232 | 24 | 221 | 2.82e-44 | 149 |
MS.gene028913.t1 | MTR_2g090330 | 64.545 | 110 | 29 | 2 | 37 | 146 | 30 | 129 | 6.67e-44 | 146 |
MS.gene028913.t1 | MTR_2g090330 | 64.545 | 110 | 29 | 2 | 37 | 146 | 27 | 126 | 9.20e-44 | 145 |
MS.gene028913.t1 | MTR_2g090325 | 60.630 | 127 | 35 | 4 | 29 | 153 | 7 | 120 | 2.66e-41 | 140 |
MS.gene028913.t1 | MTR_4g088870 | 34.979 | 243 | 105 | 10 | 14 | 247 | 1 | 199 | 5.62e-33 | 119 |
MS.gene028913.t1 | MTR_4g088875 | 39.706 | 204 | 98 | 6 | 38 | 232 | 29 | 216 | 1.39e-32 | 119 |
MS.gene028913.t1 | MTR_1g021895 | 52.128 | 94 | 33 | 3 | 37 | 128 | 27 | 110 | 1.36e-26 | 103 |
MS.gene028913.t1 | MTR_5g019300 | 50.562 | 89 | 36 | 2 | 40 | 128 | 35 | 115 | 9.09e-26 | 101 |
MS.gene028913.t1 | MTR_7g093390 | 41.964 | 112 | 51 | 4 | 15 | 126 | 149 | 246 | 4.03e-23 | 97.4 |
MS.gene028913.t1 | MTR_1g054260 | 30.921 | 152 | 97 | 4 | 3 | 152 | 55 | 200 | 1.20e-21 | 89.7 |
MS.gene028913.t1 | MTR_4g029440 | 38.462 | 130 | 65 | 4 | 8 | 129 | 86 | 208 | 1.80e-21 | 92.8 |
MS.gene028913.t1 | MTR_4g029440 | 38.462 | 130 | 65 | 4 | 8 | 129 | 92 | 214 | 1.94e-21 | 92.8 |
MS.gene028913.t1 | MTR_1g054465 | 40.449 | 89 | 51 | 2 | 40 | 126 | 55 | 143 | 9.35e-21 | 87.0 |
MS.gene028913.t1 | MTR_1g054280 | 38.889 | 108 | 58 | 3 | 19 | 126 | 56 | 155 | 9.46e-21 | 88.6 |
MS.gene028913.t1 | MTR_1g054210 | 43.011 | 93 | 44 | 3 | 36 | 126 | 116 | 201 | 8.18e-19 | 82.8 |
MS.gene028913.t1 | MTR_2g061230 | 36.667 | 90 | 50 | 1 | 40 | 129 | 107 | 189 | 7.18e-16 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028913.t1 | AT4G03510 | 46.047 | 215 | 108 | 4 | 35 | 247 | 41 | 249 | 1.93e-63 | 199 |
MS.gene028913.t1 | AT4G03510 | 46.047 | 215 | 108 | 4 | 35 | 247 | 41 | 249 | 1.93e-63 | 199 |
MS.gene028913.t1 | AT4G03510 | 46.047 | 215 | 108 | 4 | 35 | 247 | 41 | 249 | 1.93e-63 | 199 |
MS.gene028913.t1 | AT4G03510 | 46.047 | 215 | 108 | 4 | 35 | 247 | 41 | 249 | 1.93e-63 | 199 |
MS.gene028913.t1 | AT4G28270 | 40.773 | 233 | 88 | 9 | 24 | 247 | 2 | 193 | 1.02e-46 | 154 |
MS.gene028913.t1 | AT4G27470 | 43.137 | 204 | 88 | 10 | 40 | 232 | 42 | 228 | 4.91e-40 | 138 |
MS.gene028913.t1 | AT2G23780 | 36.111 | 216 | 113 | 8 | 40 | 245 | 26 | 226 | 3.49e-27 | 104 |
MS.gene028913.t1 | AT2G23780 | 36.111 | 216 | 113 | 8 | 40 | 245 | 26 | 226 | 3.49e-27 | 104 |
MS.gene028913.t1 | AT2G23780 | 36.111 | 216 | 113 | 8 | 40 | 245 | 26 | 226 | 3.49e-27 | 104 |
MS.gene028913.t1 | AT1G74990 | 44.545 | 110 | 49 | 3 | 30 | 137 | 7 | 106 | 1.46e-26 | 100 |
MS.gene028913.t1 | AT1G19310 | 44.860 | 107 | 49 | 3 | 24 | 128 | 3 | 101 | 2.90e-25 | 99.8 |
MS.gene028913.t1 | AT3G58030 | 32.759 | 232 | 119 | 10 | 27 | 235 | 122 | 339 | 8.02e-23 | 96.7 |
MS.gene028913.t1 | AT3G58030 | 32.759 | 232 | 119 | 10 | 27 | 235 | 122 | 339 | 8.02e-23 | 96.7 |
MS.gene028913.t1 | AT3G58030 | 32.759 | 232 | 119 | 10 | 27 | 235 | 122 | 339 | 8.02e-23 | 96.7 |
MS.gene028913.t1 | AT3G58030 | 32.759 | 232 | 119 | 10 | 27 | 235 | 122 | 339 | 8.02e-23 | 96.7 |
MS.gene028913.t1 | AT2G42030 | 33.880 | 183 | 91 | 6 | 36 | 213 | 133 | 290 | 1.64e-20 | 90.1 |
MS.gene028913.t1 | AT2G44410 | 37.037 | 108 | 51 | 3 | 25 | 126 | 106 | 202 | 2.34e-17 | 80.9 |
MS.gene028913.t1 | AT2G26350 | 37.895 | 95 | 43 | 3 | 8 | 102 | 299 | 377 | 9.50e-11 | 61.6 |
Find 66 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGTAAGATTGTATGAATT+TGG | 0.196085 | 2.3:-10261640 | None:intergenic |
TTTCTTCCATGGAATCAATT+TGG | 0.249281 | 2.3:-10261063 | None:intergenic |
AAAGGCAATGATCACCAATT+AGG | 0.249482 | 2.3:+10261361 | MS.gene028913:CDS |
GTTGAGAATGATTCGGATAA+TGG | 0.278191 | 2.3:-10261489 | None:intergenic |
CTTTGGAAGGCGGCGTAGTT+TGG | 0.290827 | 2.3:-10261342 | None:intergenic |
ATGATATATGCAAGGATCTT+TGG | 0.299279 | 2.3:+10261589 | MS.gene028913:CDS |
CCAAATTCATACAATCTTAC+AGG | 0.303928 | 2.3:+10261640 | MS.gene028913:CDS |
GCAAGTGGTGAAGCAATTTC+TGG | 0.315559 | 2.3:+10261112 | MS.gene028913:CDS |
GAGATTTCTGATTTGCATAC+TGG | 0.331060 | 2.3:-10261286 | None:intergenic |
TATGGAATAGCATTCAAAAT+AGG | 0.331156 | 2.3:-10261762 | None:intergenic |
CTGTAAGATTGTATGAATTT+GGG | 0.342103 | 2.3:-10261639 | None:intergenic |
GATACAAGTTATGGTGTCTT+TGG | 0.352630 | 2.3:+10261562 | MS.gene028913:CDS |
TTGAGAATGATTCGGATAAT+GGG | 0.356464 | 2.3:-10261488 | None:intergenic |
CTAGACCGCTTGGTCCTTCA+TGG | 0.359817 | 2.3:+10261398 | MS.gene028913:CDS |
AAGGCAATGATCACCAATTA+GGG | 0.391729 | 2.3:+10261362 | MS.gene028913:CDS |
GTGGTATGACACTCCCTAAT+TGG | 0.404265 | 2.3:-10261375 | None:intergenic |
ATGTTTCACAACATAATTCT+CGG | 0.420768 | 2.3:+10261455 | MS.gene028913:CDS |
CATGAAGGACCAAGCGGTCT+AGG | 0.421483 | 2.3:-10261397 | None:intergenic |
TTTGCAGCGTCAAGTGATCT+TGG | 0.423758 | 2.3:-10261433 | None:intergenic |
ATCAAATGCCTTCTGATCCT+TGG | 0.432608 | 2.3:-10261673 | None:intergenic |
ATTAAGCCATTTGTAAATGC+AGG | 0.444845 | 2.3:-10261218 | None:intergenic |
GATCCAGTGGTCACTCTTTG+TGG | 0.447780 | 2.3:+10261178 | MS.gene028913:CDS |
TAATTGGTGATCATTGCCTT+TGG | 0.448612 | 2.3:-10261359 | None:intergenic |
GCTGGCCCTGCATTTACAAA+TGG | 0.463384 | 2.3:+10261212 | MS.gene028913:CDS |
CTCCTCAAAATACTGATTGA+AGG | 0.463468 | 2.3:-10261032 | None:intergenic |
TATGAACCAAATTGATTCCA+TGG | 0.475517 | 2.3:+10261057 | MS.gene028913:CDS |
TTTGTGGTCATCTCTACTGC+TGG | 0.480977 | 2.3:+10261194 | MS.gene028913:CDS |
AATCCATTGGATACAAGTTA+TGG | 0.483929 | 2.3:+10261553 | MS.gene028913:CDS |
ATAACTTGTATCCAATGGAT+TGG | 0.489925 | 2.3:-10261551 | None:intergenic |
ATGTATATATGTTTGTCACT+TGG | 0.494265 | 2.3:-10261615 | None:intergenic |
TAACTTGTATCCAATGGATT+GGG | 0.500116 | 2.3:-10261550 | None:intergenic |
CTTTGACTGCAACATATGCT+TGG | 0.503274 | 2.3:+10261144 | MS.gene028913:CDS |
GTTTGGCCGCGGCCGTAGAG+TGG | 0.505416 | 2.3:-10261325 | None:intergenic |
GAAGCAATTTCTGGTTCTAG+TGG | 0.514216 | 2.3:+10261121 | MS.gene028913:CDS |
TGGTGATCATTGCCTTTGGA+AGG | 0.521075 | 2.3:-10261355 | None:intergenic |
TGGTTCACTGCCCAATCCAT+TGG | 0.524258 | 2.3:+10261540 | MS.gene028913:CDS |
TCATCCCTTGTTCCACTCTA+CGG | 0.525770 | 2.3:+10261313 | MS.gene028913:CDS |
AAGGCGGCGTAGTTTGGCCG+CGG | 0.530973 | 2.3:-10261336 | None:intergenic |
GACACAAAACTGTGCAGCAA+AGG | 0.541056 | 2.3:-10261735 | None:intergenic |
CGCGGCCGTAGAGTGGAACA+AGG | 0.543163 | 2.3:-10261318 | None:intergenic |
GTGTATCGTTGAGAATGATT+CGG | 0.543480 | 2.3:-10261496 | None:intergenic |
CAAATTCATACAATCTTACA+GGG | 0.556632 | 2.3:+10261641 | MS.gene028913:CDS |
GTCATACCACCTAGACCGCT+TGG | 0.564556 | 2.3:+10261388 | MS.gene028913:CDS |
CAAACTACGCCGCCTTCCAA+AGG | 0.572732 | 2.3:+10261343 | MS.gene028913:CDS |
GGTAAGTTCGTCATCCATGA+AGG | 0.573904 | 2.3:-10261412 | None:intergenic |
ACACCATAACTTGTATCCAA+TGG | 0.574386 | 2.3:-10261556 | None:intergenic |
ACAAAACTGTGCAGCAAAGG+AGG | 0.577384 | 2.3:-10261732 | None:intergenic |
TGATCATTGCCTTTGGAAGG+CGG | 0.577497 | 2.3:-10261352 | None:intergenic |
TCAGTAATCCAAGGATCAGA+AGG | 0.591994 | 2.3:+10261665 | MS.gene028913:CDS |
TGACCACAAAGAGTGACCAC+TGG | 0.593140 | 2.3:-10261181 | None:intergenic |
TTAAGCCATTTGTAAATGCA+GGG | 0.593204 | 2.3:-10261217 | None:intergenic |
TCGCCAATGTTTAACACAGG+TGG | 0.595550 | 2.3:+10261520 | MS.gene028913:CDS |
GATTTGCATACTGGACATTG+TGG | 0.605821 | 2.3:-10261277 | None:intergenic |
GAACCACCTGTGTTAAACAT+TGG | 0.613627 | 2.3:-10261523 | None:intergenic |
ATGCGAGCTGATAAGTCGCT+CGG | 0.619945 | 2.3:+10261694 | MS.gene028913:CDS |
TTACAGGGATCAGTAATCCA+AGG | 0.633705 | 2.3:+10261656 | MS.gene028913:CDS |
CGAAAATCAAGAGAAGCAGA+AGG | 0.635468 | 2.3:+10261249 | MS.gene028913:CDS |
TGAGAATGATTCGGATAATG+GGG | 0.646474 | 2.3:-10261487 | None:intergenic |
TTGGTGAGATGATATATGCA+AGG | 0.649382 | 2.3:+10261581 | MS.gene028913:CDS |
GAAGGACCAAGCGGTCTAGG+TGG | 0.660331 | 2.3:-10261394 | None:intergenic |
ACTTCGCCAATGTTTAACAC+AGG | 0.666429 | 2.3:+10261517 | MS.gene028913:CDS |
GGAGTGTGTGCAAGATCCAG+TGG | 0.671005 | 2.3:+10261165 | MS.gene028913:CDS |
CTTGTTCCACTCTACGGCCG+CGG | 0.675004 | 2.3:+10261319 | MS.gene028913:CDS |
GTCATCCATGAAGGACCAAG+CGG | 0.707584 | 2.3:-10261403 | None:intergenic |
GAAGTGTGGAAATGTGCAAG+TGG | 0.714630 | 2.3:+10261097 | MS.gene028913:CDS |
GCGGCCGTAGAGTGGAACAA+GGG | 0.719279 | 2.3:-10261317 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATGTATATATGTTTGTCACT+TGG | - | chr2.3:10261618-10261637 | None:intergenic | 25.0% |
! | ATGTTTCACAACATAATTCT+CGG | + | chr2.3:10261455-10261474 | MS.gene028913:CDS | 25.0% |
! | CAAATTCATACAATCTTACA+GGG | + | chr2.3:10261641-10261660 | MS.gene028913:CDS | 25.0% |
! | CTGTAAGATTGTATGAATTT+GGG | - | chr2.3:10261642-10261661 | None:intergenic | 25.0% |
AAAAATCATCTCAAGAAGTG+TGG | + | chr2.3:10261083-10261102 | MS.gene028913:CDS | 30.0% | |
AATCCATTGGATACAAGTTA+TGG | + | chr2.3:10261553-10261572 | MS.gene028913:CDS | 30.0% | |
ATGATATATGCAAGGATCTT+TGG | + | chr2.3:10261589-10261608 | MS.gene028913:CDS | 30.0% | |
ATTAAGCCATTTGTAAATGC+AGG | - | chr2.3:10261221-10261240 | None:intergenic | 30.0% | |
CCAAATTCATACAATCTTAC+AGG | + | chr2.3:10261640-10261659 | MS.gene028913:CDS | 30.0% | |
CCTGTAAGATTGTATGAATT+TGG | - | chr2.3:10261643-10261662 | None:intergenic | 30.0% | |
TTAAGCCATTTGTAAATGCA+GGG | - | chr2.3:10261220-10261239 | None:intergenic | 30.0% | |
TTTCTTCCATGGAATCAATT+TGG | - | chr2.3:10261066-10261085 | None:intergenic | 30.0% | |
! | ATAACTTGTATCCAATGGAT+TGG | - | chr2.3:10261554-10261573 | None:intergenic | 30.0% |
! | TAACTTGTATCCAATGGATT+GGG | - | chr2.3:10261553-10261572 | None:intergenic | 30.0% |
! | TATGAACCAAATTGATTCCA+TGG | + | chr2.3:10261057-10261076 | MS.gene028913:CDS | 30.0% |
! | TTGAGAATGATTCGGATAAT+GGG | - | chr2.3:10261491-10261510 | None:intergenic | 30.0% |
! | TTGAGATGATTTTTCTTCCA+TGG | - | chr2.3:10261077-10261096 | None:intergenic | 30.0% |
!! | TTCAATCAGTATTTTGAGGA+GGG | + | chr2.3:10261034-10261053 | MS.gene028913:CDS | 30.0% |
AAAGGCAATGATCACCAATT+AGG | + | chr2.3:10261361-10261380 | MS.gene028913:CDS | 35.0% | |
AAGGCAATGATCACCAATTA+GGG | + | chr2.3:10261362-10261381 | MS.gene028913:CDS | 35.0% | |
GATACAAGTTATGGTGTCTT+TGG | + | chr2.3:10261562-10261581 | MS.gene028913:CDS | 35.0% | |
GTGTATCGTTGAGAATGATT+CGG | - | chr2.3:10261499-10261518 | None:intergenic | 35.0% | |
TTGGTGAGATGATATATGCA+AGG | + | chr2.3:10261581-10261600 | MS.gene028913:CDS | 35.0% | |
! | ACACCATAACTTGTATCCAA+TGG | - | chr2.3:10261559-10261578 | None:intergenic | 35.0% |
! | CTCCTCAAAATACTGATTGA+AGG | - | chr2.3:10261035-10261054 | None:intergenic | 35.0% |
! | CTTCTGCTTCTCTTGATTTT+CGG | - | chr2.3:10261251-10261270 | None:intergenic | 35.0% |
! | GAGATTTCTGATTTGCATAC+TGG | - | chr2.3:10261289-10261308 | None:intergenic | 35.0% |
! | GTTGAGAATGATTCGGATAA+TGG | - | chr2.3:10261492-10261511 | None:intergenic | 35.0% |
! | TAATTGGTGATCATTGCCTT+TGG | - | chr2.3:10261362-10261381 | None:intergenic | 35.0% |
! | TGAGAATGATTCGGATAATG+GGG | - | chr2.3:10261490-10261509 | None:intergenic | 35.0% |
!! | CTTCAATCAGTATTTTGAGG+AGG | + | chr2.3:10261033-10261052 | MS.gene028913:CDS | 35.0% |
ACTTCGCCAATGTTTAACAC+AGG | + | chr2.3:10261517-10261536 | MS.gene028913:CDS | 40.0% | |
ATCAAATGCCTTCTGATCCT+TGG | - | chr2.3:10261676-10261695 | None:intergenic | 40.0% | |
CGAAAATCAAGAGAAGCAGA+AGG | + | chr2.3:10261249-10261268 | MS.gene028913:CDS | 40.0% | |
CTTTGACTGCAACATATGCT+TGG | + | chr2.3:10261144-10261163 | MS.gene028913:CDS | 40.0% | |
GAACCACCTGTGTTAAACAT+TGG | - | chr2.3:10261526-10261545 | None:intergenic | 40.0% | |
GATTTGCATACTGGACATTG+TGG | - | chr2.3:10261280-10261299 | None:intergenic | 40.0% | |
TCAGTAATCCAAGGATCAGA+AGG | + | chr2.3:10261665-10261684 | MS.gene028913:CDS | 40.0% | |
TTACAGGGATCAGTAATCCA+AGG | + | chr2.3:10261656-10261675 | MS.gene028913:CDS | 40.0% | |
! | GGCCTTCAATCAGTATTTTG+AGG | + | chr2.3:10261030-10261049 | MS.gene028913:CDS | 40.0% |
!! | GAAGCAATTTCTGGTTCTAG+TGG | + | chr2.3:10261121-10261140 | MS.gene028913:CDS | 40.0% |
ACAAAACTGTGCAGCAAAGG+AGG | - | chr2.3:10261735-10261754 | None:intergenic | 45.0% | |
GAAGTGTGGAAATGTGCAAG+TGG | + | chr2.3:10261097-10261116 | MS.gene028913:CDS | 45.0% | |
GACACAAAACTGTGCAGCAA+AGG | - | chr2.3:10261738-10261757 | None:intergenic | 45.0% | |
GCAAGTGGTGAAGCAATTTC+TGG | + | chr2.3:10261112-10261131 | MS.gene028913:CDS | 45.0% | |
GGTAAGTTCGTCATCCATGA+AGG | - | chr2.3:10261415-10261434 | None:intergenic | 45.0% | |
GTGGTATGACACTCCCTAAT+TGG | - | chr2.3:10261378-10261397 | None:intergenic | 45.0% | |
TCATCCCTTGTTCCACTCTA+CGG | + | chr2.3:10261313-10261332 | MS.gene028913:CDS | 45.0% | |
TCGCCAATGTTTAACACAGG+TGG | + | chr2.3:10261520-10261539 | MS.gene028913:CDS | 45.0% | |
TGGTGATCATTGCCTTTGGA+AGG | - | chr2.3:10261358-10261377 | None:intergenic | 45.0% | |
TTTGCAGCGTCAAGTGATCT+TGG | - | chr2.3:10261436-10261455 | None:intergenic | 45.0% | |
TTTGTGGTCATCTCTACTGC+TGG | + | chr2.3:10261194-10261213 | MS.gene028913:CDS | 45.0% | |
! | GCTTCTCTTGATTTTCGGCA+TGG | - | chr2.3:10261246-10261265 | None:intergenic | 45.0% |
! | TGATCATTGCCTTTGGAAGG+CGG | - | chr2.3:10261355-10261374 | None:intergenic | 45.0% |
ATGCGAGCTGATAAGTCGCT+CGG | + | chr2.3:10261694-10261713 | MS.gene028913:CDS | 50.0% | |
GATCCAGTGGTCACTCTTTG+TGG | + | chr2.3:10261178-10261197 | MS.gene028913:CDS | 50.0% | |
GCTGGCCCTGCATTTACAAA+TGG | + | chr2.3:10261212-10261231 | MS.gene028913:CDS | 50.0% | |
GTCATCCATGAAGGACCAAG+CGG | - | chr2.3:10261406-10261425 | None:intergenic | 50.0% | |
TGACCACAAAGAGTGACCAC+TGG | - | chr2.3:10261184-10261203 | None:intergenic | 50.0% | |
TGGTTCACTGCCCAATCCAT+TGG | + | chr2.3:10261540-10261559 | MS.gene028913:CDS | 50.0% | |
CAAACTACGCCGCCTTCCAA+AGG | + | chr2.3:10261343-10261362 | MS.gene028913:CDS | 55.0% | |
CATGAAGGACCAAGCGGTCT+AGG | - | chr2.3:10261400-10261419 | None:intergenic | 55.0% | |
CTAGACCGCTTGGTCCTTCA+TGG | + | chr2.3:10261398-10261417 | MS.gene028913:CDS | 55.0% | |
GGAGTGTGTGCAAGATCCAG+TGG | + | chr2.3:10261165-10261184 | MS.gene028913:CDS | 55.0% | |
GTCATACCACCTAGACCGCT+TGG | + | chr2.3:10261388-10261407 | MS.gene028913:CDS | 55.0% | |
! | CTTTGGAAGGCGGCGTAGTT+TGG | - | chr2.3:10261345-10261364 | None:intergenic | 55.0% |
CTTGTTCCACTCTACGGCCG+CGG | + | chr2.3:10261319-10261338 | MS.gene028913:CDS | 60.0% | |
GAAGGACCAAGCGGTCTAGG+TGG | - | chr2.3:10261397-10261416 | None:intergenic | 60.0% | |
GCGGCCGTAGAGTGGAACAA+GGG | - | chr2.3:10261320-10261339 | None:intergenic | 60.0% | |
AAGGCGGCGTAGTTTGGCCG+CGG | - | chr2.3:10261339-10261358 | None:intergenic | 65.0% | |
CGCGGCCGTAGAGTGGAACA+AGG | - | chr2.3:10261321-10261340 | None:intergenic | 65.0% | |
GTTTGGCCGCGGCCGTAGAG+TGG | - | chr2.3:10261328-10261347 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 10261028 | 10261771 | 10261028 | ID=MS.gene028913 |
chr2.3 | mRNA | 10261028 | 10261771 | 10261028 | ID=MS.gene028913.t1;Parent=MS.gene028913 |
chr2.3 | exon | 10261028 | 10261771 | 10261028 | ID=MS.gene028913.t1.exon1;Parent=MS.gene028913.t1 |
chr2.3 | CDS | 10261028 | 10261771 | 10261028 | ID=cds.MS.gene028913.t1;Parent=MS.gene028913.t1 |
Gene Sequence |
Protein sequence |