Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032302.t1 | AEB69786.1 | 96.8 | 250 | 8 | 0 | 1 | 250 | 1 | 250 | 4.50E-139 | 503.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032302.t1 | Q8GUK7 | 51.0 | 241 | 94 | 9 | 15 | 250 | 22 | 243 | 5.3e-48 | 192.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032302.t1 | G9CSC7 | 96.8 | 250 | 8 | 0 | 1 | 250 | 1 | 250 | 3.2e-139 | 503.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene032302 | MS.gene028913 | PPI |
MS.gene31477 | MS.gene032302 | PPI |
MS.gene032302 | MS.gene055816 | PPI |
MS.gene53316 | MS.gene032302 | PPI |
MS.gene032302 | MS.gene31476 | PPI |
MS.gene53923 | MS.gene032302 | PPI |
MS.gene032302 | MS.gene052865 | PPI |
MS.gene055815 | MS.gene032302 | PPI |
MS.gene043442 | MS.gene032302 | PPI |
MS.gene63411 | MS.gene032302 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032302.t1 | MTR_8g465910 | 44.269 | 253 | 102 | 11 | 10 | 250 | 19 | 244 | 1.29e-61 | 194 |
MS.gene032302.t1 | MTR_2g090295 | 40.496 | 242 | 107 | 8 | 10 | 238 | 18 | 235 | 2.88e-51 | 167 |
MS.gene032302.t1 | MTR_4g088875 | 38.793 | 232 | 116 | 7 | 11 | 236 | 6 | 217 | 8.69e-45 | 150 |
MS.gene032302.t1 | MTR_4g088870 | 35.772 | 246 | 100 | 6 | 11 | 250 | 6 | 199 | 1.45e-42 | 144 |
MS.gene032302.t1 | MTR_2g013550 | 42.466 | 219 | 114 | 7 | 21 | 236 | 13 | 222 | 2.26e-42 | 144 |
MS.gene032302.t1 | MTR_2g090330 | 60.674 | 89 | 33 | 1 | 32 | 120 | 30 | 116 | 3.17e-33 | 119 |
MS.gene032302.t1 | MTR_2g090330 | 60.674 | 89 | 33 | 1 | 32 | 120 | 27 | 113 | 3.97e-33 | 118 |
MS.gene032302.t1 | MTR_2g090325 | 48.760 | 121 | 39 | 4 | 35 | 145 | 18 | 125 | 7.84e-30 | 110 |
MS.gene032302.t1 | MTR_1g021895 | 55.814 | 86 | 31 | 2 | 35 | 120 | 30 | 108 | 4.90e-29 | 109 |
MS.gene032302.t1 | MTR_5g019300 | 51.648 | 91 | 37 | 2 | 30 | 120 | 30 | 113 | 2.64e-27 | 105 |
MS.gene032302.t1 | MTR_1g054280 | 41.593 | 113 | 60 | 2 | 8 | 120 | 49 | 155 | 1.06e-23 | 96.7 |
MS.gene032302.t1 | MTR_7g093390 | 43.810 | 105 | 48 | 3 | 16 | 120 | 153 | 246 | 2.38e-22 | 95.5 |
MS.gene032302.t1 | MTR_1g054210 | 35.556 | 135 | 77 | 4 | 8 | 139 | 93 | 220 | 5.33e-21 | 88.6 |
MS.gene032302.t1 | MTR_4g029440 | 38.776 | 98 | 54 | 1 | 23 | 120 | 120 | 211 | 6.48e-21 | 91.3 |
MS.gene032302.t1 | MTR_4g029440 | 38.776 | 98 | 54 | 1 | 23 | 120 | 114 | 205 | 6.57e-21 | 91.3 |
MS.gene032302.t1 | MTR_1g054260 | 37.500 | 128 | 66 | 4 | 19 | 137 | 65 | 187 | 1.07e-20 | 87.0 |
MS.gene032302.t1 | MTR_1g054465 | 35.398 | 113 | 70 | 2 | 11 | 120 | 31 | 143 | 1.65e-19 | 84.0 |
MS.gene032302.t1 | MTR_2g061230 | 40.909 | 88 | 46 | 1 | 33 | 120 | 105 | 186 | 2.46e-18 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032302.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
MS.gene032302.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
MS.gene032302.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
MS.gene032302.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
MS.gene032302.t1 | AT4G27470 | 49.123 | 228 | 90 | 10 | 15 | 236 | 22 | 229 | 2.47e-53 | 172 |
MS.gene032302.t1 | AT4G28270 | 35.685 | 241 | 94 | 8 | 19 | 250 | 5 | 193 | 6.89e-40 | 137 |
MS.gene032302.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
MS.gene032302.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
MS.gene032302.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
MS.gene032302.t1 | AT1G19310 | 58.140 | 86 | 29 | 2 | 35 | 120 | 21 | 99 | 1.07e-29 | 111 |
MS.gene032302.t1 | AT1G74990 | 53.061 | 98 | 36 | 3 | 26 | 120 | 5 | 95 | 2.13e-28 | 105 |
MS.gene032302.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
MS.gene032302.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
MS.gene032302.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
MS.gene032302.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
MS.gene032302.t1 | AT2G42030 | 44.444 | 99 | 41 | 3 | 35 | 131 | 139 | 225 | 1.85e-20 | 90.1 |
MS.gene032302.t1 | AT2G44410 | 40.000 | 90 | 40 | 2 | 35 | 120 | 123 | 202 | 6.14e-18 | 82.8 |
Find 66 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAACCAACCTGTAGTTTAT+TGG | 0.128251 | 8.2:-47814270 | None:intergenic |
ATTTCCTGCCTTCTCATTCT+AGG | 0.172452 | 8.2:-47814605 | None:intergenic |
CACTACATCCCTCACCTTTA+TGG | 0.179900 | 8.2:+47814425 | MS.gene032302:CDS |
AACATAGCATTTAAGTTATA+AGG | 0.203842 | 8.2:-47814314 | None:intergenic |
ATCCTGTGATGGGTTTGTTT+GGG | 0.307382 | 8.2:+47814507 | MS.gene032302:CDS |
ACTTCATTAGTCCCACTTTA+CGG | 0.312481 | 8.2:+47814218 | MS.gene032302:CDS |
GATGGGTTTGTTTGGGGAGA+TGG | 0.320135 | 8.2:+47814514 | MS.gene032302:CDS |
AAAGTGGGACTAATGAAGTA+TGG | 0.333058 | 8.2:-47814214 | None:intergenic |
AATCCTGTGATGGGTTTGTT+TGG | 0.347652 | 8.2:+47814506 | MS.gene032302:CDS |
TCAATGGAATCTACATGCTT+TGG | 0.371719 | 8.2:+47813948 | None:intergenic |
AACCTGTAGTTTATTGGATT+CGG | 0.384366 | 8.2:-47814264 | None:intergenic |
TCCTCGTGATGTAGATTTGA+TGG | 0.387604 | 8.2:-47814350 | None:intergenic |
CCAAAGCTCTTCTGTTGAAC+TGG | 0.390019 | 8.2:+47814151 | MS.gene032302:CDS |
GCCAATGGGTTACATTATCT+TGG | 0.409333 | 8.2:+47814458 | MS.gene032302:CDS |
CCAGTTCAACAGAAGAGCTT+TGG | 0.409537 | 8.2:-47814151 | None:intergenic |
ATATGCATGGCCAGCAATAC+AGG | 0.414858 | 8.2:-47814112 | None:intergenic |
TCTGTGGTCACCTGTATTGC+TGG | 0.419618 | 8.2:+47814102 | MS.gene032302:CDS |
CTTTGATTGCAATATTTGCT+TGG | 0.432126 | 8.2:+47814052 | MS.gene032302:CDS |
CTGCCTTCTCATTCTAGGAC+TGG | 0.437502 | 8.2:-47814600 | None:intergenic |
GGACTGGTACTTCCGTTATG+AGG | 0.441104 | 8.2:-47814584 | None:intergenic |
TGGCACTATGACCTCCATAA+AGG | 0.443573 | 8.2:-47814439 | None:intergenic |
GAGATCACGGCTTTACAAAC+CGG | 0.457250 | 8.2:-47814191 | None:intergenic |
GAATTGGTCGCGATTGTGAC+TGG | 0.479790 | 8.2:-47814394 | None:intergenic |
TAGTTTCGTCAATCCTGTGA+TGG | 0.480852 | 8.2:+47814496 | MS.gene032302:CDS |
ATGGTGTCGACAAGGATGTT+TGG | 0.510014 | 8.2:+47814533 | MS.gene032302:CDS |
GATTTCCCTCGGCCGTAAAG+TGG | 0.513776 | 8.2:-47814230 | None:intergenic |
TATGGAGGTCATAGTGCCAA+TGG | 0.516603 | 8.2:+47814443 | MS.gene032302:CDS |
AACCGAATCCAATAAACTAC+AGG | 0.526244 | 8.2:+47814262 | MS.gene032302:CDS |
AGTTTCGTCAATCCTGTGAT+GGG | 0.527399 | 8.2:+47814497 | MS.gene032302:CDS |
GATTGTGACTGGAAATAGTT+CGG | 0.527943 | 8.2:-47814383 | None:intergenic |
GATTGTTGTATCTTCTGTAG+TGG | 0.527970 | 8.2:-47814009 | None:intergenic |
ATGGAGGTCATAGTGCCAAT+GGG | 0.535195 | 8.2:+47814444 | MS.gene032302:CDS |
GCATTTAAGTTATAAGGAGG+TGG | 0.545819 | 8.2:-47814308 | None:intergenic |
TTTCTGAATTAGATTTCCCT+CGG | 0.545966 | 8.2:-47814241 | None:intergenic |
TTAGTCCCACTTTACGGCCG+AGG | 0.552806 | 8.2:+47814224 | MS.gene032302:CDS |
GCTGGCCATGCATATATAAG+TGG | 0.555073 | 8.2:+47814120 | MS.gene032302:CDS |
AAGTGGGACTAATGAAGTAT+GGG | 0.558591 | 8.2:-47814213 | None:intergenic |
TCCTGTGATGGGTTTGTTTG+GGG | 0.558787 | 8.2:+47814508 | MS.gene032302:CDS |
TTGTTTGCGTACCCTCATAA+CGG | 0.562898 | 8.2:+47814572 | MS.gene032302:CDS |
TCCCCAAACAAACCCATCAC+AGG | 0.565091 | 8.2:-47814509 | None:intergenic |
GCTTTACAAACCGGGCATGT+TGG | 0.566623 | 8.2:-47814182 | None:intergenic |
ATGTAGTGCTGATAATGAAT+TGG | 0.567201 | 8.2:-47814410 | None:intergenic |
AATGGGTTACATTATCTTGG+TGG | 0.568227 | 8.2:+47814461 | MS.gene032302:CDS |
TAGTCCCACTTTACGGCCGA+GGG | 0.568488 | 8.2:+47814225 | MS.gene032302:CDS |
ATTTCCCTCGGCCGTAAAGT+GGG | 0.571345 | 8.2:-47814229 | None:intergenic |
GGATACGCAGCCAACATGCC+CGG | 0.580139 | 8.2:+47814172 | MS.gene032302:CDS |
GACTGGTACTTCCGTTATGA+GGG | 0.589526 | 8.2:-47814583 | None:intergenic |
GAATCCAATAAACTACAGGT+TGG | 0.591477 | 8.2:+47814266 | MS.gene032302:CDS |
TAATGAAGTATGGGAGATCA+CGG | 0.595278 | 8.2:-47814204 | None:intergenic |
CCTCGTGATGTAGATTTGAT+GGG | 0.597079 | 8.2:-47814349 | None:intergenic |
TTAAGCCACTTATATATGCA+TGG | 0.597413 | 8.2:-47814125 | None:intergenic |
CAGTCCTAGAATGAGAAGGC+AGG | 0.602401 | 8.2:+47814601 | MS.gene032302:CDS |
ACCAAGATAATGTAACCCAT+TGG | 0.617703 | 8.2:-47814459 | None:intergenic |
CCCATCAAATCTACATCACG+AGG | 0.619297 | 8.2:+47814349 | MS.gene032302:CDS |
ATAGCATTTAAGTTATAAGG+AGG | 0.631590 | 8.2:-47814311 | None:intergenic |
TATGACCTCCATAAAGGTGA+GGG | 0.631991 | 8.2:-47814433 | None:intergenic |
CTATGACCTCCATAAAGGTG+AGG | 0.632142 | 8.2:-47814434 | None:intergenic |
GTACCAGTCCTAGAATGAGA+AGG | 0.633102 | 8.2:+47814597 | MS.gene032302:CDS |
GAAGATACAACAATCTCTAG+TGG | 0.636864 | 8.2:+47814017 | MS.gene032302:CDS |
TTATAAGGAGGTGGTCGATG+AGG | 0.637282 | 8.2:-47814299 | None:intergenic |
AGATCACGGCTTTACAAACC+GGG | 0.639253 | 8.2:-47814190 | None:intergenic |
GGAATCAGCAAATGATCCTG+TGG | 0.647430 | 8.2:+47814073 | MS.gene032302:CDS |
TGACCACAGAGTGTAACCAC+AGG | 0.655445 | 8.2:-47814089 | None:intergenic |
TTGGGGAGATGGTGTCGACA+AGG | 0.666430 | 8.2:+47814525 | MS.gene032302:CDS |
TACATCCCTCACCTTTATGG+AGG | 0.669481 | 8.2:+47814428 | MS.gene032302:CDS |
GATCCTGTGGTTACACTCTG+TGG | 0.698699 | 8.2:+47814086 | MS.gene032302:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACATAGCATTTAAGTTATA+AGG | - | chr8.2:47814317-47814336 | None:intergenic | 20.0% |
!! | ATAGCATTTAAGTTATAAGG+AGG | - | chr8.2:47814314-47814333 | None:intergenic | 25.0% |
AACCTGTAGTTTATTGGATT+CGG | - | chr8.2:47814267-47814286 | None:intergenic | 30.0% | |
AAGTCTCACTAAAGCAAAAA+TGG | + | chr8.2:47813982-47814001 | MS.gene032302:CDS | 30.0% | |
CTTTGATTGCAATATTTGCT+TGG | + | chr8.2:47814052-47814071 | MS.gene032302:CDS | 30.0% | |
TAAACCAACCTGTAGTTTAT+TGG | - | chr8.2:47814273-47814292 | None:intergenic | 30.0% | |
TTAAGCCACTTATATATGCA+TGG | - | chr8.2:47814128-47814147 | None:intergenic | 30.0% | |
TTTCTGAATTAGATTTCCCT+CGG | - | chr8.2:47814244-47814263 | None:intergenic | 30.0% | |
!! | ATGTAGTGCTGATAATGAAT+TGG | - | chr8.2:47814413-47814432 | None:intergenic | 30.0% |
AAAGTGGGACTAATGAAGTA+TGG | - | chr8.2:47814217-47814236 | None:intergenic | 35.0% | |
AACCGAATCCAATAAACTAC+AGG | + | chr8.2:47814262-47814281 | MS.gene032302:CDS | 35.0% | |
AAGTGGGACTAATGAAGTAT+GGG | - | chr8.2:47814216-47814235 | None:intergenic | 35.0% | |
ACCAAGATAATGTAACCCAT+TGG | - | chr8.2:47814462-47814481 | None:intergenic | 35.0% | |
ACTTCATTAGTCCCACTTTA+CGG | + | chr8.2:47814218-47814237 | MS.gene032302:CDS | 35.0% | |
GAAGATACAACAATCTCTAG+TGG | + | chr8.2:47814017-47814036 | MS.gene032302:CDS | 35.0% | |
GAATCCAATAAACTACAGGT+TGG | + | chr8.2:47814266-47814285 | MS.gene032302:CDS | 35.0% | |
GATTGTGACTGGAAATAGTT+CGG | - | chr8.2:47814386-47814405 | None:intergenic | 35.0% | |
GATTGTTGTATCTTCTGTAG+TGG | - | chr8.2:47814012-47814031 | None:intergenic | 35.0% | |
TAATGAAGTATGGGAGATCA+CGG | - | chr8.2:47814207-47814226 | None:intergenic | 35.0% | |
! | GCATTTAAGTTATAAGGAGG+TGG | - | chr8.2:47814311-47814330 | None:intergenic | 35.0% |
!! | AATGGGTTACATTATCTTGG+TGG | + | chr8.2:47814461-47814480 | MS.gene032302:CDS | 35.0% |
AGTTTCGTCAATCCTGTGAT+GGG | + | chr8.2:47814497-47814516 | MS.gene032302:CDS | 40.0% | |
ATTTCCTGCCTTCTCATTCT+AGG | - | chr8.2:47814608-47814627 | None:intergenic | 40.0% | |
CCTCGTGATGTAGATTTGAT+GGG | - | chr8.2:47814352-47814371 | None:intergenic | 40.0% | |
TAGTTTCGTCAATCCTGTGA+TGG | + | chr8.2:47814496-47814515 | MS.gene032302:CDS | 40.0% | |
TATGACCTCCATAAAGGTGA+GGG | - | chr8.2:47814436-47814455 | None:intergenic | 40.0% | |
TCCTCGTGATGTAGATTTGA+TGG | - | chr8.2:47814353-47814372 | None:intergenic | 40.0% | |
TTGTTTGCGTACCCTCATAA+CGG | + | chr8.2:47814572-47814591 | MS.gene032302:CDS | 40.0% | |
!! | AATCCTGTGATGGGTTTGTT+TGG | + | chr8.2:47814506-47814525 | MS.gene032302:CDS | 40.0% |
!! | ATCCTGTGATGGGTTTGTTT+GGG | + | chr8.2:47814507-47814526 | MS.gene032302:CDS | 40.0% |
!! | GCCAATGGGTTACATTATCT+TGG | + | chr8.2:47814458-47814477 | MS.gene032302:CDS | 40.0% |
AGATCACGGCTTTACAAACC+GGG | - | chr8.2:47814193-47814212 | None:intergenic | 45.0% | |
ATATGCATGGCCAGCAATAC+AGG | - | chr8.2:47814115-47814134 | None:intergenic | 45.0% | |
ATGGAGGTCATAGTGCCAAT+GGG | + | chr8.2:47814444-47814463 | MS.gene032302:CDS | 45.0% | |
CACTACATCCCTCACCTTTA+TGG | + | chr8.2:47814425-47814444 | MS.gene032302:CDS | 45.0% | |
CCAAAGCTCTTCTGTTGAAC+TGG | + | chr8.2:47814151-47814170 | MS.gene032302:CDS | 45.0% | |
CCAGTTCAACAGAAGAGCTT+TGG | - | chr8.2:47814154-47814173 | None:intergenic | 45.0% | |
CCCATCAAATCTACATCACG+AGG | + | chr8.2:47814349-47814368 | MS.gene032302:CDS | 45.0% | |
CTATGACCTCCATAAAGGTG+AGG | - | chr8.2:47814437-47814456 | None:intergenic | 45.0% | |
GACTGGTACTTCCGTTATGA+GGG | - | chr8.2:47814586-47814605 | None:intergenic | 45.0% | |
GAGATCACGGCTTTACAAAC+CGG | - | chr8.2:47814194-47814213 | None:intergenic | 45.0% | |
GCTGGCCATGCATATATAAG+TGG | + | chr8.2:47814120-47814139 | MS.gene032302:CDS | 45.0% | |
GGAATCAGCAAATGATCCTG+TGG | + | chr8.2:47814073-47814092 | MS.gene032302:CDS | 45.0% | |
GTACCAGTCCTAGAATGAGA+AGG | + | chr8.2:47814597-47814616 | MS.gene032302:CDS | 45.0% | |
TACATCCCTCACCTTTATGG+AGG | + | chr8.2:47814428-47814447 | MS.gene032302:CDS | 45.0% | |
TATGGAGGTCATAGTGCCAA+TGG | + | chr8.2:47814443-47814462 | MS.gene032302:CDS | 45.0% | |
TGGCACTATGACCTCCATAA+AGG | - | chr8.2:47814442-47814461 | None:intergenic | 45.0% | |
TTATAAGGAGGTGGTCGATG+AGG | - | chr8.2:47814302-47814321 | None:intergenic | 45.0% | |
!! | ATGGTGTCGACAAGGATGTT+TGG | + | chr8.2:47814533-47814552 | MS.gene032302:CDS | 45.0% |
!! | TCCTGTGATGGGTTTGTTTG+GGG | + | chr8.2:47814508-47814527 | MS.gene032302:CDS | 45.0% |
ATTTCCCTCGGCCGTAAAGT+GGG | - | chr8.2:47814232-47814251 | None:intergenic | 50.0% | |
CAGTCCTAGAATGAGAAGGC+AGG | + | chr8.2:47814601-47814620 | MS.gene032302:CDS | 50.0% | |
GAATTGGTCGCGATTGTGAC+TGG | - | chr8.2:47814397-47814416 | None:intergenic | 50.0% | |
GATCCTGTGGTTACACTCTG+TGG | + | chr8.2:47814086-47814105 | MS.gene032302:CDS | 50.0% | |
GCTTTACAAACCGGGCATGT+TGG | - | chr8.2:47814185-47814204 | None:intergenic | 50.0% | |
TCCCCAAACAAACCCATCAC+AGG | - | chr8.2:47814512-47814531 | None:intergenic | 50.0% | |
TCTGTGGTCACCTGTATTGC+TGG | + | chr8.2:47814102-47814121 | MS.gene032302:CDS | 50.0% | |
TGACCACAGAGTGTAACCAC+AGG | - | chr8.2:47814092-47814111 | None:intergenic | 50.0% | |
! | GATGGGTTTGTTTGGGGAGA+TGG | + | chr8.2:47814514-47814533 | MS.gene032302:CDS | 50.0% |
! | GGACTGGTACTTCCGTTATG+AGG | - | chr8.2:47814587-47814606 | None:intergenic | 50.0% |
!! | CTGCCTTCTCATTCTAGGAC+TGG | - | chr8.2:47814603-47814622 | None:intergenic | 50.0% |
GATTTCCCTCGGCCGTAAAG+TGG | - | chr8.2:47814233-47814252 | None:intergenic | 55.0% | |
TAGTCCCACTTTACGGCCGA+GGG | + | chr8.2:47814225-47814244 | MS.gene032302:CDS | 55.0% | |
TTAGTCCCACTTTACGGCCG+AGG | + | chr8.2:47814224-47814243 | MS.gene032302:CDS | 55.0% | |
!! | TTGGGGAGATGGTGTCGACA+AGG | + | chr8.2:47814525-47814544 | MS.gene032302:CDS | 55.0% |
GGATACGCAGCCAACATGCC+CGG | + | chr8.2:47814172-47814191 | MS.gene032302:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 47813951 | 47814703 | 47813951 | ID=MS.gene032302 |
chr8.2 | mRNA | 47813951 | 47814703 | 47813951 | ID=MS.gene032302.t1;Parent=MS.gene032302 |
chr8.2 | exon | 47813951 | 47814703 | 47813951 | ID=MS.gene032302.t1.exon1;Parent=MS.gene032302.t1 |
chr8.2 | CDS | 47813951 | 47814703 | 47813951 | ID=cds.MS.gene032302.t1;Parent=MS.gene032302.t1 |
Gene Sequence |
Protein sequence |