Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34211.t1 | AEB69786.1 | 96.8 | 250 | 8 | 0 | 1 | 250 | 1 | 250 | 4.50E-139 | 503.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34211.t1 | Q8GUK7 | 51.0 | 241 | 94 | 9 | 15 | 250 | 22 | 243 | 5.3e-48 | 192.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34211.t1 | G9CSC7 | 96.8 | 250 | 8 | 0 | 1 | 250 | 1 | 250 | 3.2e-139 | 503.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043442 | MS.gene34211 | PPI |
| MS.gene63411 | MS.gene34211 | PPI |
| MS.gene53316 | MS.gene34211 | PPI |
| MS.gene34211 | MS.gene055816 | PPI |
| MS.gene31477 | MS.gene34211 | PPI |
| MS.gene34211 | MS.gene028913 | PPI |
| MS.gene53923 | MS.gene34211 | PPI |
| MS.gene055815 | MS.gene34211 | PPI |
| MS.gene34211 | MS.gene31476 | PPI |
| MS.gene34211 | MS.gene052865 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34211.t1 | MTR_8g465910 | 44.269 | 253 | 102 | 11 | 10 | 250 | 19 | 244 | 1.29e-61 | 194 |
| MS.gene34211.t1 | MTR_2g090295 | 40.496 | 242 | 107 | 8 | 10 | 238 | 18 | 235 | 2.88e-51 | 167 |
| MS.gene34211.t1 | MTR_4g088875 | 38.793 | 232 | 116 | 7 | 11 | 236 | 6 | 217 | 8.69e-45 | 150 |
| MS.gene34211.t1 | MTR_4g088870 | 35.772 | 246 | 100 | 6 | 11 | 250 | 6 | 199 | 1.45e-42 | 144 |
| MS.gene34211.t1 | MTR_2g013550 | 42.466 | 219 | 114 | 7 | 21 | 236 | 13 | 222 | 2.26e-42 | 144 |
| MS.gene34211.t1 | MTR_2g090330 | 60.674 | 89 | 33 | 1 | 32 | 120 | 30 | 116 | 3.17e-33 | 119 |
| MS.gene34211.t1 | MTR_2g090330 | 60.674 | 89 | 33 | 1 | 32 | 120 | 27 | 113 | 3.97e-33 | 118 |
| MS.gene34211.t1 | MTR_2g090325 | 48.760 | 121 | 39 | 4 | 35 | 145 | 18 | 125 | 7.84e-30 | 110 |
| MS.gene34211.t1 | MTR_1g021895 | 55.814 | 86 | 31 | 2 | 35 | 120 | 30 | 108 | 4.90e-29 | 109 |
| MS.gene34211.t1 | MTR_5g019300 | 51.648 | 91 | 37 | 2 | 30 | 120 | 30 | 113 | 2.64e-27 | 105 |
| MS.gene34211.t1 | MTR_1g054280 | 41.593 | 113 | 60 | 2 | 8 | 120 | 49 | 155 | 1.06e-23 | 96.7 |
| MS.gene34211.t1 | MTR_7g093390 | 43.810 | 105 | 48 | 3 | 16 | 120 | 153 | 246 | 2.38e-22 | 95.5 |
| MS.gene34211.t1 | MTR_1g054210 | 35.556 | 135 | 77 | 4 | 8 | 139 | 93 | 220 | 5.33e-21 | 88.6 |
| MS.gene34211.t1 | MTR_4g029440 | 38.776 | 98 | 54 | 1 | 23 | 120 | 120 | 211 | 6.48e-21 | 91.3 |
| MS.gene34211.t1 | MTR_4g029440 | 38.776 | 98 | 54 | 1 | 23 | 120 | 114 | 205 | 6.57e-21 | 91.3 |
| MS.gene34211.t1 | MTR_1g054260 | 37.500 | 128 | 66 | 4 | 19 | 137 | 65 | 187 | 1.07e-20 | 87.0 |
| MS.gene34211.t1 | MTR_1g054465 | 35.398 | 113 | 70 | 2 | 11 | 120 | 31 | 143 | 1.65e-19 | 84.0 |
| MS.gene34211.t1 | MTR_2g061230 | 40.909 | 88 | 46 | 1 | 33 | 120 | 105 | 186 | 2.46e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34211.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
| MS.gene34211.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
| MS.gene34211.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
| MS.gene34211.t1 | AT4G03510 | 43.860 | 228 | 100 | 6 | 31 | 250 | 42 | 249 | 3.27e-59 | 188 |
| MS.gene34211.t1 | AT4G27470 | 49.123 | 228 | 90 | 10 | 15 | 236 | 22 | 229 | 2.47e-53 | 172 |
| MS.gene34211.t1 | AT4G28270 | 35.685 | 241 | 94 | 8 | 19 | 250 | 5 | 193 | 6.89e-40 | 137 |
| MS.gene34211.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
| MS.gene34211.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
| MS.gene34211.t1 | AT2G23780 | 34.733 | 262 | 111 | 11 | 9 | 248 | 3 | 226 | 2.67e-31 | 115 |
| MS.gene34211.t1 | AT1G19310 | 58.140 | 86 | 29 | 2 | 35 | 120 | 21 | 99 | 1.07e-29 | 111 |
| MS.gene34211.t1 | AT1G74990 | 53.061 | 98 | 36 | 3 | 26 | 120 | 5 | 95 | 2.13e-28 | 105 |
| MS.gene34211.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
| MS.gene34211.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
| MS.gene34211.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
| MS.gene34211.t1 | AT3G58030 | 35.766 | 137 | 73 | 5 | 24 | 155 | 125 | 251 | 1.44e-22 | 95.9 |
| MS.gene34211.t1 | AT2G42030 | 44.444 | 99 | 41 | 3 | 35 | 131 | 139 | 225 | 1.85e-20 | 90.1 |
| MS.gene34211.t1 | AT2G44410 | 40.000 | 90 | 40 | 2 | 35 | 120 | 123 | 202 | 6.14e-18 | 82.8 |
Find 66 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACCAACCTGTAGTTTAT+TGG | 0.128251 | 8.4:-48154250 | None:intergenic |
| ATTTCCTGCCTTCTCATTCT+AGG | 0.172452 | 8.4:-48154585 | None:intergenic |
| CACTACATCCCTCACCTTTA+TGG | 0.179900 | 8.4:+48154405 | MS.gene34211:CDS |
| AACATAGCATTTAAGTTATA+AGG | 0.203842 | 8.4:-48154294 | None:intergenic |
| ATCCTGTGATGGGTTTGTTT+GGG | 0.307382 | 8.4:+48154487 | MS.gene34211:CDS |
| ACTTCATTAGTCCCACTTTA+CGG | 0.312481 | 8.4:+48154198 | MS.gene34211:CDS |
| GATGGGTTTGTTTGGGGAGA+TGG | 0.320135 | 8.4:+48154494 | MS.gene34211:CDS |
| AAAGTGGGACTAATGAAGTA+TGG | 0.333058 | 8.4:-48154194 | None:intergenic |
| AATCCTGTGATGGGTTTGTT+TGG | 0.347652 | 8.4:+48154486 | MS.gene34211:CDS |
| TCAATGGAATCTACATGCTT+TGG | 0.371719 | 8.4:+48153928 | None:intergenic |
| AACCTGTAGTTTATTGGATT+CGG | 0.384366 | 8.4:-48154244 | None:intergenic |
| TCCTCGTGATGTAGATTTGA+TGG | 0.387604 | 8.4:-48154330 | None:intergenic |
| CCAAAGCTCTTCTGTTGAAC+TGG | 0.390019 | 8.4:+48154131 | MS.gene34211:CDS |
| GCCAATGGGTTACATTATCT+TGG | 0.409333 | 8.4:+48154438 | MS.gene34211:CDS |
| CCAGTTCAACAGAAGAGCTT+TGG | 0.409537 | 8.4:-48154131 | None:intergenic |
| ATATGCATGGCCAGCAATAC+AGG | 0.414858 | 8.4:-48154092 | None:intergenic |
| TCTGTGGTCACCTGTATTGC+TGG | 0.419618 | 8.4:+48154082 | MS.gene34211:CDS |
| CTTTGATTGCAATATTTGCT+TGG | 0.432126 | 8.4:+48154032 | MS.gene34211:CDS |
| CTGCCTTCTCATTCTAGGAC+TGG | 0.437502 | 8.4:-48154580 | None:intergenic |
| GGACTGGTACTTCCGTTATG+AGG | 0.441104 | 8.4:-48154564 | None:intergenic |
| TGGCACTATGACCTCCATAA+AGG | 0.443573 | 8.4:-48154419 | None:intergenic |
| GAGATCACGGCTTTACAAAC+CGG | 0.457250 | 8.4:-48154171 | None:intergenic |
| GAATTGGTCGCGATTGTGAC+TGG | 0.479790 | 8.4:-48154374 | None:intergenic |
| TAGTTTCGTCAATCCTGTGA+TGG | 0.480852 | 8.4:+48154476 | MS.gene34211:CDS |
| ATGGTGTCGACAAGGATGTT+TGG | 0.510014 | 8.4:+48154513 | MS.gene34211:CDS |
| GATTTCCCTCGGCCGTAAAG+TGG | 0.513776 | 8.4:-48154210 | None:intergenic |
| TATGGAGGTCATAGTGCCAA+TGG | 0.516603 | 8.4:+48154423 | MS.gene34211:CDS |
| AACCGAATCCAATAAACTAC+AGG | 0.526244 | 8.4:+48154242 | MS.gene34211:CDS |
| AGTTTCGTCAATCCTGTGAT+GGG | 0.527399 | 8.4:+48154477 | MS.gene34211:CDS |
| GATTGTGACTGGAAATAGTT+CGG | 0.527943 | 8.4:-48154363 | None:intergenic |
| GATTGTTGTATCTTCTGTAG+TGG | 0.527970 | 8.4:-48153989 | None:intergenic |
| ATGGAGGTCATAGTGCCAAT+GGG | 0.535195 | 8.4:+48154424 | MS.gene34211:CDS |
| GCATTTAAGTTATAAGGAGG+TGG | 0.545819 | 8.4:-48154288 | None:intergenic |
| TTTCTGAATTAGATTTCCCT+CGG | 0.545966 | 8.4:-48154221 | None:intergenic |
| TTAGTCCCACTTTACGGCCG+AGG | 0.552806 | 8.4:+48154204 | MS.gene34211:CDS |
| GCTGGCCATGCATATATAAG+TGG | 0.555073 | 8.4:+48154100 | MS.gene34211:CDS |
| AAGTGGGACTAATGAAGTAT+GGG | 0.558591 | 8.4:-48154193 | None:intergenic |
| TCCTGTGATGGGTTTGTTTG+GGG | 0.558787 | 8.4:+48154488 | MS.gene34211:CDS |
| TTGTTTGCGTACCCTCATAA+CGG | 0.562898 | 8.4:+48154552 | MS.gene34211:CDS |
| TCCCCAAACAAACCCATCAC+AGG | 0.565091 | 8.4:-48154489 | None:intergenic |
| GCTTTACAAACCGGGCATGT+TGG | 0.566623 | 8.4:-48154162 | None:intergenic |
| ATGTAGTGCTGATAATGAAT+TGG | 0.567201 | 8.4:-48154390 | None:intergenic |
| AATGGGTTACATTATCTTGG+TGG | 0.568227 | 8.4:+48154441 | MS.gene34211:CDS |
| TAGTCCCACTTTACGGCCGA+GGG | 0.568488 | 8.4:+48154205 | MS.gene34211:CDS |
| ATTTCCCTCGGCCGTAAAGT+GGG | 0.571345 | 8.4:-48154209 | None:intergenic |
| GGATACGCAGCCAACATGCC+CGG | 0.580139 | 8.4:+48154152 | MS.gene34211:CDS |
| GACTGGTACTTCCGTTATGA+GGG | 0.589526 | 8.4:-48154563 | None:intergenic |
| GAATCCAATAAACTACAGGT+TGG | 0.591477 | 8.4:+48154246 | MS.gene34211:CDS |
| TAATGAAGTATGGGAGATCA+CGG | 0.595278 | 8.4:-48154184 | None:intergenic |
| CCTCGTGATGTAGATTTGAT+GGG | 0.597079 | 8.4:-48154329 | None:intergenic |
| TTAAGCCACTTATATATGCA+TGG | 0.597413 | 8.4:-48154105 | None:intergenic |
| CAGTCCTAGAATGAGAAGGC+AGG | 0.602401 | 8.4:+48154581 | MS.gene34211:CDS |
| ACCAAGATAATGTAACCCAT+TGG | 0.617703 | 8.4:-48154439 | None:intergenic |
| CCCATCAAATCTACATCACG+AGG | 0.619297 | 8.4:+48154329 | MS.gene34211:CDS |
| ATAGCATTTAAGTTATAAGG+AGG | 0.631590 | 8.4:-48154291 | None:intergenic |
| TATGACCTCCATAAAGGTGA+GGG | 0.631991 | 8.4:-48154413 | None:intergenic |
| CTATGACCTCCATAAAGGTG+AGG | 0.632142 | 8.4:-48154414 | None:intergenic |
| GTACCAGTCCTAGAATGAGA+AGG | 0.633102 | 8.4:+48154577 | MS.gene34211:CDS |
| GAAGATACAACAATCTCTAG+TGG | 0.636864 | 8.4:+48153997 | MS.gene34211:CDS |
| TTATAAGGAGGTGGTCGATG+AGG | 0.637282 | 8.4:-48154279 | None:intergenic |
| AGATCACGGCTTTACAAACC+GGG | 0.639253 | 8.4:-48154170 | None:intergenic |
| GGAATCAGCAAATGATCCTG+TGG | 0.647430 | 8.4:+48154053 | MS.gene34211:CDS |
| TGACCACAGAGTGTAACCAC+AGG | 0.655445 | 8.4:-48154069 | None:intergenic |
| TTGGGGAGATGGTGTCGACA+AGG | 0.666430 | 8.4:+48154505 | MS.gene34211:CDS |
| TACATCCCTCACCTTTATGG+AGG | 0.669481 | 8.4:+48154408 | MS.gene34211:CDS |
| GATCCTGTGGTTACACTCTG+TGG | 0.698699 | 8.4:+48154066 | MS.gene34211:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATAGCATTTAAGTTATA+AGG | - | chr8.4:48154297-48154316 | None:intergenic | 20.0% |
| !! | ATAGCATTTAAGTTATAAGG+AGG | - | chr8.4:48154294-48154313 | None:intergenic | 25.0% |
| AACCTGTAGTTTATTGGATT+CGG | - | chr8.4:48154247-48154266 | None:intergenic | 30.0% | |
| AAGTCTCACTAAAGCAAAAA+TGG | + | chr8.4:48153962-48153981 | MS.gene34211:CDS | 30.0% | |
| CTTTGATTGCAATATTTGCT+TGG | + | chr8.4:48154032-48154051 | MS.gene34211:CDS | 30.0% | |
| TAAACCAACCTGTAGTTTAT+TGG | - | chr8.4:48154253-48154272 | None:intergenic | 30.0% | |
| TTAAGCCACTTATATATGCA+TGG | - | chr8.4:48154108-48154127 | None:intergenic | 30.0% | |
| TTTCTGAATTAGATTTCCCT+CGG | - | chr8.4:48154224-48154243 | None:intergenic | 30.0% | |
| !! | ATGTAGTGCTGATAATGAAT+TGG | - | chr8.4:48154393-48154412 | None:intergenic | 30.0% |
| AAAGTGGGACTAATGAAGTA+TGG | - | chr8.4:48154197-48154216 | None:intergenic | 35.0% | |
| AACCGAATCCAATAAACTAC+AGG | + | chr8.4:48154242-48154261 | MS.gene34211:CDS | 35.0% | |
| AAGTGGGACTAATGAAGTAT+GGG | - | chr8.4:48154196-48154215 | None:intergenic | 35.0% | |
| ACCAAGATAATGTAACCCAT+TGG | - | chr8.4:48154442-48154461 | None:intergenic | 35.0% | |
| ACTTCATTAGTCCCACTTTA+CGG | + | chr8.4:48154198-48154217 | MS.gene34211:CDS | 35.0% | |
| GAAGATACAACAATCTCTAG+TGG | + | chr8.4:48153997-48154016 | MS.gene34211:CDS | 35.0% | |
| GAATCCAATAAACTACAGGT+TGG | + | chr8.4:48154246-48154265 | MS.gene34211:CDS | 35.0% | |
| GATTGTGACTGGAAATAGTT+CGG | - | chr8.4:48154366-48154385 | None:intergenic | 35.0% | |
| GATTGTTGTATCTTCTGTAG+TGG | - | chr8.4:48153992-48154011 | None:intergenic | 35.0% | |
| TAATGAAGTATGGGAGATCA+CGG | - | chr8.4:48154187-48154206 | None:intergenic | 35.0% | |
| ! | GCATTTAAGTTATAAGGAGG+TGG | - | chr8.4:48154291-48154310 | None:intergenic | 35.0% |
| !! | AATGGGTTACATTATCTTGG+TGG | + | chr8.4:48154441-48154460 | MS.gene34211:CDS | 35.0% |
| AGTTTCGTCAATCCTGTGAT+GGG | + | chr8.4:48154477-48154496 | MS.gene34211:CDS | 40.0% | |
| ATTTCCTGCCTTCTCATTCT+AGG | - | chr8.4:48154588-48154607 | None:intergenic | 40.0% | |
| CCTCGTGATGTAGATTTGAT+GGG | - | chr8.4:48154332-48154351 | None:intergenic | 40.0% | |
| TAGTTTCGTCAATCCTGTGA+TGG | + | chr8.4:48154476-48154495 | MS.gene34211:CDS | 40.0% | |
| TATGACCTCCATAAAGGTGA+GGG | - | chr8.4:48154416-48154435 | None:intergenic | 40.0% | |
| TCCTCGTGATGTAGATTTGA+TGG | - | chr8.4:48154333-48154352 | None:intergenic | 40.0% | |
| TTGTTTGCGTACCCTCATAA+CGG | + | chr8.4:48154552-48154571 | MS.gene34211:CDS | 40.0% | |
| !! | AATCCTGTGATGGGTTTGTT+TGG | + | chr8.4:48154486-48154505 | MS.gene34211:CDS | 40.0% |
| !! | ATCCTGTGATGGGTTTGTTT+GGG | + | chr8.4:48154487-48154506 | MS.gene34211:CDS | 40.0% |
| !! | GCCAATGGGTTACATTATCT+TGG | + | chr8.4:48154438-48154457 | MS.gene34211:CDS | 40.0% |
| AGATCACGGCTTTACAAACC+GGG | - | chr8.4:48154173-48154192 | None:intergenic | 45.0% | |
| ATATGCATGGCCAGCAATAC+AGG | - | chr8.4:48154095-48154114 | None:intergenic | 45.0% | |
| ATGGAGGTCATAGTGCCAAT+GGG | + | chr8.4:48154424-48154443 | MS.gene34211:CDS | 45.0% | |
| CACTACATCCCTCACCTTTA+TGG | + | chr8.4:48154405-48154424 | MS.gene34211:CDS | 45.0% | |
| CCAAAGCTCTTCTGTTGAAC+TGG | + | chr8.4:48154131-48154150 | MS.gene34211:CDS | 45.0% | |
| CCAGTTCAACAGAAGAGCTT+TGG | - | chr8.4:48154134-48154153 | None:intergenic | 45.0% | |
| CCCATCAAATCTACATCACG+AGG | + | chr8.4:48154329-48154348 | MS.gene34211:CDS | 45.0% | |
| CTATGACCTCCATAAAGGTG+AGG | - | chr8.4:48154417-48154436 | None:intergenic | 45.0% | |
| GACTGGTACTTCCGTTATGA+GGG | - | chr8.4:48154566-48154585 | None:intergenic | 45.0% | |
| GAGATCACGGCTTTACAAAC+CGG | - | chr8.4:48154174-48154193 | None:intergenic | 45.0% | |
| GCTGGCCATGCATATATAAG+TGG | + | chr8.4:48154100-48154119 | MS.gene34211:CDS | 45.0% | |
| GGAATCAGCAAATGATCCTG+TGG | + | chr8.4:48154053-48154072 | MS.gene34211:CDS | 45.0% | |
| GTACCAGTCCTAGAATGAGA+AGG | + | chr8.4:48154577-48154596 | MS.gene34211:CDS | 45.0% | |
| TACATCCCTCACCTTTATGG+AGG | + | chr8.4:48154408-48154427 | MS.gene34211:CDS | 45.0% | |
| TATGGAGGTCATAGTGCCAA+TGG | + | chr8.4:48154423-48154442 | MS.gene34211:CDS | 45.0% | |
| TGGCACTATGACCTCCATAA+AGG | - | chr8.4:48154422-48154441 | None:intergenic | 45.0% | |
| TTATAAGGAGGTGGTCGATG+AGG | - | chr8.4:48154282-48154301 | None:intergenic | 45.0% | |
| !! | ATGGTGTCGACAAGGATGTT+TGG | + | chr8.4:48154513-48154532 | MS.gene34211:CDS | 45.0% |
| !! | TCCTGTGATGGGTTTGTTTG+GGG | + | chr8.4:48154488-48154507 | MS.gene34211:CDS | 45.0% |
| ATTTCCCTCGGCCGTAAAGT+GGG | - | chr8.4:48154212-48154231 | None:intergenic | 50.0% | |
| CAGTCCTAGAATGAGAAGGC+AGG | + | chr8.4:48154581-48154600 | MS.gene34211:CDS | 50.0% | |
| GAATTGGTCGCGATTGTGAC+TGG | - | chr8.4:48154377-48154396 | None:intergenic | 50.0% | |
| GATCCTGTGGTTACACTCTG+TGG | + | chr8.4:48154066-48154085 | MS.gene34211:CDS | 50.0% | |
| GCTTTACAAACCGGGCATGT+TGG | - | chr8.4:48154165-48154184 | None:intergenic | 50.0% | |
| TCCCCAAACAAACCCATCAC+AGG | - | chr8.4:48154492-48154511 | None:intergenic | 50.0% | |
| TCTGTGGTCACCTGTATTGC+TGG | + | chr8.4:48154082-48154101 | MS.gene34211:CDS | 50.0% | |
| TGACCACAGAGTGTAACCAC+AGG | - | chr8.4:48154072-48154091 | None:intergenic | 50.0% | |
| ! | GATGGGTTTGTTTGGGGAGA+TGG | + | chr8.4:48154494-48154513 | MS.gene34211:CDS | 50.0% |
| ! | GGACTGGTACTTCCGTTATG+AGG | - | chr8.4:48154567-48154586 | None:intergenic | 50.0% |
| !! | CTGCCTTCTCATTCTAGGAC+TGG | - | chr8.4:48154583-48154602 | None:intergenic | 50.0% |
| GATTTCCCTCGGCCGTAAAG+TGG | - | chr8.4:48154213-48154232 | None:intergenic | 55.0% | |
| TAGTCCCACTTTACGGCCGA+GGG | + | chr8.4:48154205-48154224 | MS.gene34211:CDS | 55.0% | |
| TTAGTCCCACTTTACGGCCG+AGG | + | chr8.4:48154204-48154223 | MS.gene34211:CDS | 55.0% | |
| !! | TTGGGGAGATGGTGTCGACA+AGG | + | chr8.4:48154505-48154524 | MS.gene34211:CDS | 55.0% |
| GGATACGCAGCCAACATGCC+CGG | + | chr8.4:48154152-48154171 | MS.gene34211:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 48153931 | 48154683 | 48153931 | ID=MS.gene34211 |
| chr8.4 | mRNA | 48153931 | 48154683 | 48153931 | ID=MS.gene34211.t1;Parent=MS.gene34211 |
| chr8.4 | exon | 48153931 | 48154683 | 48153931 | ID=MS.gene34211.t1.exon1;Parent=MS.gene34211.t1 |
| chr8.4 | CDS | 48153931 | 48154683 | 48153931 | ID=cds.MS.gene34211.t1;Parent=MS.gene34211.t1 |
| Gene Sequence |
| Protein sequence |
