Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029233.t1 | XP_003592706.1 | 100 | 606 | 0 | 0 | 47 | 652 | 1 | 606 | 0.00E+00 | 1219.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029233.t1 | Q8LPJ4 | 91.3 | 606 | 52 | 1 | 47 | 652 | 1 | 605 | 0.0e+00 | 1119.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029233.t1 | G7IE72 | 100.0 | 606 | 0 | 0 | 47 | 652 | 1 | 606 | 0.0e+00 | 1219.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56742 | MS.gene029233 | PPI |
| MS.gene029233 | MS.gene68299 | PPI |
| MS.gene44915 | MS.gene029233 | PPI |
| MS.gene029233 | MS.gene20554 | PPI |
| MS.gene43933 | MS.gene029233 | PPI |
| MS.gene027546 | MS.gene029233 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029233.t1 | MTR_1g114170 | 100.000 | 606 | 0 | 0 | 47 | 652 | 1 | 606 | 0.0 | 1259 |
| MS.gene029233.t1 | MTR_1g025075 | 96.046 | 607 | 23 | 1 | 47 | 652 | 1 | 607 | 0.0 | 1214 |
| MS.gene029233.t1 | MTR_4g007890 | 87.043 | 602 | 76 | 2 | 51 | 652 | 1 | 600 | 0.0 | 1085 |
| MS.gene029233.t1 | MTR_1g025075 | 96.869 | 511 | 16 | 0 | 142 | 652 | 17 | 527 | 0.0 | 1029 |
| MS.gene029233.t1 | MTR_1g024860 | 84.699 | 549 | 63 | 4 | 47 | 594 | 1 | 529 | 0.0 | 941 |
| MS.gene029233.t1 | MTR_1g024860 | 28.458 | 253 | 129 | 8 | 420 | 647 | 103 | 328 | 3.45e-22 | 101 |
| MS.gene029233.t1 | MTR_4g113820 | 95.455 | 44 | 2 | 0 | 1 | 44 | 36 | 79 | 3.36e-13 | 66.6 |
| MS.gene029233.t1 | MTR_1567s0010 | 28.571 | 196 | 124 | 6 | 407 | 591 | 245 | 435 | 2.31e-12 | 70.1 |
| MS.gene029233.t1 | MTR_1g007360 | 67.500 | 40 | 13 | 0 | 2 | 41 | 42 | 81 | 4.55e-11 | 60.8 |
| MS.gene029233.t1 | MTR_3g095010 | 29.586 | 169 | 104 | 5 | 423 | 586 | 461 | 619 | 6.42e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029233.t1 | AT4G19210 | 91.254 | 606 | 52 | 1 | 47 | 652 | 1 | 605 | 0.0 | 1156 |
| MS.gene029233.t1 | AT3G13640 | 78.218 | 606 | 129 | 1 | 47 | 652 | 1 | 603 | 0.0 | 1004 |
| MS.gene029233.t1 | AT4G30300 | 66.477 | 176 | 56 | 3 | 401 | 574 | 1 | 175 | 3.53e-70 | 226 |
| MS.gene029233.t1 | AT4G30300 | 29.375 | 160 | 95 | 3 | 150 | 309 | 21 | 162 | 1.84e-12 | 66.6 |
| MS.gene029233.t1 | AT4G33460 | 30.000 | 180 | 113 | 6 | 420 | 591 | 70 | 244 | 4.77e-11 | 64.3 |
Find 158 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCGGCAAGTTGATAATT+TGG | 0.141900 | 1.4:-87217181 | None:intergenic |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 1.4:+87218409 | MS.gene029233:CDS |
| CAAGAGGTTCAGAATCTTTC+TGG | 0.182659 | 1.4:+87220369 | MS.gene029233:CDS |
| ACATGTATATCTCAGCATTT+TGG | 0.193506 | 1.4:-87218471 | None:intergenic |
| CCAAAACTCAAGGCAATTTC+AGG | 0.203901 | 1.4:+87219969 | MS.gene029233:CDS |
| GCAATTCAGATCCTCGAAAA+TGG | 0.208418 | 1.4:-87217586 | None:intergenic |
| GACTTTATTTGCTGTTTATA+TGG | 0.218246 | 1.4:+87218743 | MS.gene029233:CDS |
| GCAAGTGTCTAACAGATAAT+TGG | 0.222574 | 1.4:-87220260 | None:intergenic |
| ACATTCCCTTGCACAGCTTT+TGG | 0.248703 | 1.4:-87218304 | None:intergenic |
| CCTGAAATTGCCTTGAGTTT+TGG | 0.257880 | 1.4:-87219969 | None:intergenic |
| GTGCTTGAGCAGTGGGATTC+AGG | 0.261696 | 1.4:-87215622 | None:intergenic |
| CGAGCACGATCTTAGTGTTT+TGG | 0.269250 | 1.4:+87218709 | MS.gene029233:CDS |
| TATCAACTTGCCGAAGGATT+TGG | 0.275167 | 1.4:+87217187 | MS.gene029233:CDS |
| TGATGAACCTTCCAGTTATC+TGG | 0.286678 | 1.4:+87218495 | MS.gene029233:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 1.4:+87218840 | MS.gene029233:CDS |
| GTCGACTGCACTTAAGGTTT+TGG | 0.295828 | 1.4:+87217408 | MS.gene029233:CDS |
| CAACAGAAAATCTTAGGTTT+CGG | 0.312251 | 1.4:+87218846 | MS.gene029233:CDS |
| TCATCACATCTGATATAAAC+TGG | 0.317044 | 1.4:-87220317 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.326990 | 1.4:+87218847 | MS.gene029233:CDS |
| ACCAAGCACTTGCCCCGGCC+TGG | 0.332750 | 1.4:-87217359 | None:intergenic |
| TAATTATAATTGCAGGTTGC+CGG | 0.348977 | 1.4:+87217333 | MS.gene029233:intron |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.350689 | 1.4:-87217236 | None:intergenic |
| GGGCAAGTGCTTGGTTTGGT+TGG | 0.352472 | 1.4:+87217367 | MS.gene029233:CDS |
| CCCAGGCCGGGGCAAGTGCT+TGG | 0.354601 | 1.4:+87217358 | MS.gene029233:CDS |
| GGCAAGTGCTTGGTTTGGTT+GGG | 0.358646 | 1.4:+87217368 | MS.gene029233:CDS |
| GAAATCGTGCTCAACGATAA+AGG | 0.366245 | 1.4:-87221216 | None:intergenic |
| GGAGGTTTCTCTTACTTTCA+AGG | 0.366509 | 1.4:+87218868 | MS.gene029233:CDS |
| ACTACTTATTGAACAGTTGA+TGG | 0.367488 | 1.4:+87220344 | MS.gene029233:CDS |
| GTCAAAATTTCCTGCCAATC+AGG | 0.370858 | 1.4:-87217563 | None:intergenic |
| CTGTTTCACATCCAGATAAC+TGG | 0.373313 | 1.4:-87218506 | None:intergenic |
| TGGGAAGTCGACTGCACTTA+AGG | 0.380143 | 1.4:+87217402 | MS.gene029233:CDS |
| CAGGTTGCCGGTTCCCAGGC+CGG | 0.381117 | 1.4:+87217345 | MS.gene029233:intron |
| GGAAATTAATCAAACCTATT+GGG | 0.381933 | 1.4:-87218568 | None:intergenic |
| TTGGTTGGGACAAATGGAAT+TGG | 0.383851 | 1.4:+87217382 | MS.gene029233:CDS |
| CTTGGTTTGGTTGGGACAAA+TGG | 0.384149 | 1.4:+87217376 | MS.gene029233:CDS |
| GCCGGGGCAAGTGCTTGGTT+TGG | 0.387478 | 1.4:+87217363 | MS.gene029233:CDS |
| AGGTTGCCGGTTCCCAGGCC+GGG | 0.393335 | 1.4:+87217346 | MS.gene029233:intron |
| ACTTGCCCCGGCCTGGGAAC+CGG | 0.394610 | 1.4:-87217352 | None:intergenic |
| TAACAGATAATTGGGACTTT+GGG | 0.395339 | 1.4:-87220251 | None:intergenic |
| TGGTTGGGACAAATGGAATT+GGG | 0.399770 | 1.4:+87217383 | MS.gene029233:CDS |
| GATTCAAGTTTGTTGATCCT+TGG | 0.400390 | 1.4:-87221540 | None:intergenic |
| ATTCAAGTTTGTTGATCCTT+GGG | 0.401478 | 1.4:-87221539 | None:intergenic |
| TGCAGCAACAATACGCTGTT+CGG | 0.410104 | 1.4:-87221153 | None:intergenic |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.412838 | 1.4:-87221525 | None:intergenic |
| CTAACAGATAATTGGGACTT+TGG | 0.418945 | 1.4:-87220252 | None:intergenic |
| TGGAAAATTGAAGCCCAACT+TGG | 0.425877 | 1.4:+87217432 | MS.gene029233:CDS |
| CAAGTGTCTAACAGATAATT+GGG | 0.435174 | 1.4:-87220259 | None:intergenic |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 1.4:-87218797 | None:intergenic |
| GGTCATTGCTCAGGCCCAAT+AGG | 0.438087 | 1.4:+87218554 | MS.gene029233:CDS |
| GGAATTAATATCTTCTTGTC+CGG | 0.438408 | 1.4:+87218815 | MS.gene029233:CDS |
| TTGAAACCTGACACTATAGA+AGG | 0.440943 | 1.4:+87220171 | MS.gene029233:CDS |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 1.4:+87218410 | MS.gene029233:CDS |
| CATTCTAGAGGATGATTTGA+AGG | 0.442384 | 1.4:+87217625 | MS.gene029233:CDS |
| TCCTTGGGCGGAAATTAGTT+GGG | 0.449811 | 1.4:-87221524 | None:intergenic |
| TTCAGGCTTCATGTAGTTGA+AGG | 0.451867 | 1.4:+87219986 | MS.gene029233:CDS |
| CAACCGCAATGGCAAACCTT+TGG | 0.455169 | 1.4:-87218441 | None:intergenic |
| GCAGGAACCGCCTGATTGGC+AGG | 0.457134 | 1.4:+87217553 | MS.gene029233:intron |
| TACTGTGAAACGACCCAAGT+TGG | 0.462614 | 1.4:-87217446 | None:intergenic |
| TTCACAGATTATTGTGATGC+TGG | 0.464457 | 1.4:+87220021 | MS.gene029233:CDS |
| AGTTGTCCTGTCGTCAGAAC+CGG | 0.468418 | 1.4:+87216877 | MS.gene029233:CDS |
| GATCCACCTTCTATAGTGTC+AGG | 0.471777 | 1.4:-87220177 | None:intergenic |
| CAATTCAGATCCTCGAAAAT+GGG | 0.471862 | 1.4:-87217585 | None:intergenic |
| ATATCTGAGGAATTGTGTAT+TGG | 0.475022 | 1.4:+87217026 | MS.gene029233:CDS |
| GAGTATAAACTCAGTCATCT+AGG | 0.476908 | 1.4:-87221605 | None:intergenic |
| CTAGTGTAAGGATGCTACCT+TGG | 0.478144 | 1.4:+87215588 | MS.gene029233:CDS |
| GTATCTTTGTCCAAATCCTT+CGG | 0.478826 | 1.4:-87217197 | None:intergenic |
| AAGTTGTTCGGTCATTGCTC+AGG | 0.479261 | 1.4:+87218545 | MS.gene029233:CDS |
| GGTTGCCGGTTCCCAGGCCG+GGG | 0.481360 | 1.4:+87217347 | MS.gene029233:intron |
| TGAAAGCTGCCCAAGTTGTT+CGG | 0.481445 | 1.4:+87218533 | MS.gene029233:CDS |
| GTTGCGTTATGCCTTTGTCT+TGG | 0.482528 | 1.4:+87220408 | MS.gene029233:CDS |
| TGGATGCGGTATCTGTGTTA+AGG | 0.483465 | 1.4:+87217046 | MS.gene029233:CDS |
| TTTGCAGTACAGTCAATTGA+AGG | 0.484553 | 1.4:-87221287 | None:intergenic |
| ACTGTGAAACGACCCAAGTT+GGG | 0.485280 | 1.4:-87217445 | None:intergenic |
| CCAAGCACTTGCCCCGGCCT+GGG | 0.485916 | 1.4:-87217358 | None:intergenic |
| ATTTGCAGGAACCGCCTGAT+TGG | 0.486998 | 1.4:+87217549 | MS.gene029233:intron |
| TAAACAGAGGGTGTGATGGC+TGG | 0.495287 | 1.4:+87215409 | None:intergenic |
| AGCATAAGTTTGAGCTTCCT+CGG | 0.496954 | 1.4:-87219924 | None:intergenic |
| TACTTACCGGTTCTGACGAC+AGG | 0.500661 | 1.4:-87216883 | None:intergenic |
| ATAATTTGGATAGCTTCAAA+AGG | 0.502077 | 1.4:-87217167 | None:intergenic |
| ATTATGAGTGCTTGAGCAGT+GGG | 0.503205 | 1.4:-87215629 | None:intergenic |
| CGTTGAGCACGATTTCATCA+TGG | 0.508016 | 1.4:+87221223 | MS.gene029233:CDS |
| GGGTGTGATGGCTGGAGCTA+AGG | 0.508105 | 1.4:+87215417 | None:intergenic |
| ATTGCAGGTTGCCGGTTCCC+AGG | 0.508516 | 1.4:+87217341 | MS.gene029233:intron |
| GACGACCTTCATTCGTATGC+TGG | 0.512536 | 1.4:+87220063 | MS.gene029233:CDS |
| CAGAAAGATTCTGAACCTCT+TGG | 0.512923 | 1.4:-87220368 | None:intergenic |
| TGACACTTACAGATAAGAAA+AGG | 0.514344 | 1.4:-87221340 | None:intergenic |
| TTCAGGTTTGCTCTTGCCCA+AGG | 0.514820 | 1.4:-87215605 | None:intergenic |
| TGCTGTTTATATGGCAAACC+TGG | 0.517732 | 1.4:+87218752 | MS.gene029233:CDS |
| ACCAAACCAAGCACTTGCCC+CGG | 0.520624 | 1.4:-87217364 | None:intergenic |
| TGTGCAAGGGAATGTGGGGC+AGG | 0.520706 | 1.4:+87218312 | MS.gene029233:CDS |
| AGTGTCAGGTTTCAACAAAC+CGG | 0.521126 | 1.4:-87220163 | None:intergenic |
| CATCACATCTGATATAAACT+GGG | 0.522285 | 1.4:-87220316 | None:intergenic |
| TATGGCAAACCTGGTGCATA+TGG | 0.523361 | 1.4:+87218761 | MS.gene029233:CDS |
| AAAAGCTGTGCAAGGGAATG+TGG | 0.523524 | 1.4:+87218306 | MS.gene029233:CDS |
| GGAAAATTGAAGCCCAACTT+GGG | 0.525005 | 1.4:+87217433 | MS.gene029233:CDS |
| TGAGCAATGACCGAACAACT+TGG | 0.525619 | 1.4:-87218543 | None:intergenic |
| TAGTGTAAGGATGCTACCTT+GGG | 0.525979 | 1.4:+87215589 | MS.gene029233:CDS |
| TCTATCAGATAGATGTCTGC+AGG | 0.531946 | 1.4:-87221107 | None:intergenic |
| GACAGAGAGCAAAAGAATGC+TGG | 0.532220 | 1.4:+87221570 | MS.gene029233:CDS |
| GAATACCAGCATACGAATGA+AGG | 0.534723 | 1.4:-87220068 | None:intergenic |
| TGTCCACAATCATTGCTGAC+TGG | 0.536125 | 1.4:+87221311 | MS.gene029233:CDS |
| GCTCCAAAGGTTTGCCATTG+CGG | 0.537822 | 1.4:+87218438 | MS.gene029233:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 1.4:+87218397 | MS.gene029233:CDS |
| ATTGTGATGCTGGGTGAGAA+TGG | 0.542652 | 1.4:+87220031 | MS.gene029233:CDS |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 1.4:+87218794 | MS.gene029233:CDS |
| TTGCTGCAAAAGTCATCAAG+AGG | 0.552612 | 1.4:+87221168 | MS.gene029233:CDS |
| GCTTCCTCGGCAGTTTCCTG+TGG | 0.555626 | 1.4:-87219911 | None:intergenic |
| GTTATGCCTTTGTCTTGGAA+AGG | 0.557319 | 1.4:+87220413 | MS.gene029233:CDS |
| AGGAGTGGTTACAGTTGGAA+TGG | 0.561931 | 1.4:-87215467 | None:intergenic |
| CACATTCCAAAAGCTGTGCA+AGG | 0.561951 | 1.4:+87218298 | MS.gene029233:CDS |
| ATGTGCAGCTGGCTAGTGTA+AGG | 0.565754 | 1.4:+87215576 | MS.gene029233:intron |
| GTCCACAATCATTGCTGACT+GGG | 0.565913 | 1.4:+87221312 | MS.gene029233:CDS |
| ATGAGAGAGACATGAAGGAA+AGG | 0.568976 | 1.4:+87218350 | MS.gene029233:CDS |
| CCAAATTATCAACTTGCCGA+AGG | 0.569243 | 1.4:+87217181 | MS.gene029233:CDS |
| TATAGGAAGATTATGTGTTG+AGG | 0.569885 | 1.4:+87216977 | MS.gene029233:intron |
| TTGTATGATACGTTGAACTC+AGG | 0.573498 | 1.4:-87220213 | None:intergenic |
| AAAGCTGTGCAAGGGAATGT+GGG | 0.574699 | 1.4:+87218307 | MS.gene029233:CDS |
| TTGTGATGCTGGGTGAGAAT+GGG | 0.580939 | 1.4:+87220032 | MS.gene029233:CDS |
| ATCCCAGTCAGCAATGATTG+TGG | 0.583341 | 1.4:-87221314 | None:intergenic |
| TTGGATGGCAACAACCGCAA+TGG | 0.587256 | 1.4:-87218452 | None:intergenic |
| AATTATGAGTGCTTGAGCAG+TGG | 0.589258 | 1.4:-87215630 | None:intergenic |
| TTACTTCACTCGCATTCTAG+AGG | 0.589481 | 1.4:+87217613 | MS.gene029233:CDS |
| GAGCAATGACCGAACAACTT+GGG | 0.591716 | 1.4:-87218542 | None:intergenic |
| AAAGATACCACTCATAGATA+CGG | 0.592191 | 1.4:+87217212 | MS.gene029233:CDS |
| TCACAGATTATTGTGATGCT+GGG | 0.595178 | 1.4:+87220022 | MS.gene029233:CDS |
| ACCCAACTAATTTCCGCCCA+AGG | 0.596535 | 1.4:+87221523 | MS.gene029233:CDS |
| GGTTACAGTTGGAATGGCAG+TGG | 0.597023 | 1.4:-87215461 | None:intergenic |
| ATGCTGGGTGAGAATGGGAC+AGG | 0.597656 | 1.4:+87220037 | MS.gene029233:CDS |
| AAAATACCTTTCCAAGACAA+AGG | 0.600861 | 1.4:-87220419 | None:intergenic |
| GAGGTTCAGAATCTTTCTGG+TGG | 0.606749 | 1.4:+87220372 | MS.gene029233:CDS |
| ATCAACTGTTCAATAAGTAG+TGG | 0.606997 | 1.4:-87220342 | None:intergenic |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 1.4:-87221536 | None:intergenic |
| CTAGGTTGCAGAGACTCCAC+AGG | 0.612709 | 1.4:+87219895 | MS.gene029233:intron |
| GCATCTGTCGTTGCTAACGA+TGG | 0.618479 | 1.4:-87216821 | None:intergenic |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 1.4:+87218411 | MS.gene029233:CDS |
| GAAGATTGCTTACATATCTG+AGG | 0.618924 | 1.4:+87217013 | MS.gene029233:CDS |
| TGAACAGTTGATGGACCAAG+AGG | 0.621724 | 1.4:+87220353 | MS.gene029233:CDS |
| TCGGAATCAAGATATGCACT+TGG | 0.628638 | 1.4:-87221134 | None:intergenic |
| GATAGAGTTATTGTTTACGA+GGG | 0.628816 | 1.4:+87221260 | MS.gene029233:CDS |
| GGAATGTGGTCAACATACTG+AGG | 0.630705 | 1.4:-87218283 | None:intergenic |
| AAACCTGACACTATAGAAGG+TGG | 0.635558 | 1.4:+87220174 | MS.gene029233:CDS |
| AAAATTTCCTGCCAATCAGG+CGG | 0.635955 | 1.4:-87217560 | None:intergenic |
| CAACAAACTTGAATCAACAA+AGG | 0.636970 | 1.4:+87221548 | MS.gene029233:CDS |
| TGATAGAGTTATTGTTTACG+AGG | 0.637216 | 1.4:+87221259 | MS.gene029233:CDS |
| AGAAAATCTTAGGTTTCGGG+AGG | 0.637470 | 1.4:+87218850 | MS.gene029233:CDS |
| ACATTCCAAAAGCTGTGCAA+GGG | 0.637987 | 1.4:+87218299 | MS.gene029233:CDS |
| AAGCTGTGCAAGGGAATGTG+GGG | 0.647412 | 1.4:+87218308 | MS.gene029233:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.648487 | 1.4:-87220315 | None:intergenic |
| CGTCGCAGTTGTCAACATGT+CGG | 0.652133 | 1.4:+87216780 | MS.gene029233:intron |
| GTTACAACACCATATGCACC+AGG | 0.652585 | 1.4:-87218770 | None:intergenic |
| TTCACATCCAGATAACTGGA+AGG | 0.653511 | 1.4:-87218502 | None:intergenic |
| GAGGAATTGTGTATTGGATG+CGG | 0.654426 | 1.4:+87217032 | MS.gene029233:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.657607 | 1.4:+87219959 | MS.gene029233:CDS |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 1.4:+87218412 | MS.gene029233:CDS |
| GACTCCACAGGAAACTGCCG+AGG | 0.659331 | 1.4:+87219907 | MS.gene029233:CDS |
| ATTAGGACCGTATCTATGAG+TGG | 0.664710 | 1.4:-87217219 | None:intergenic |
| GTTATCTGGATGTGAAACAG+AGG | 0.693943 | 1.4:+87218509 | MS.gene029233:CDS |
| TCACATCTGATATAAACTGG+GGG | 0.704498 | 1.4:-87220314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATATATTTATTTTAA+TGG | - | chr1.4:87219475-87219494 | None:intergenic | 0.0% |
| !!! | ATTTAATTTAATTTAATTAT+AGG | + | chr1.4:87216960-87216979 | MS.gene029233:intron | 0.0% |
| !! | AAAAAATTAACCAAAATATA+AGG | - | chr1.4:87219510-87219529 | None:intergenic | 10.0% |
| !! | TAAAAAAAATAAAACAATAG+GGG | - | chr1.4:87216114-87216133 | None:intergenic | 10.0% |
| !! | TATTCTAATAAATTAGATAT+TGG | + | chr1.4:87219785-87219804 | MS.gene029233:intron | 10.0% |
| !!! | ATTAGAATATTTTTATTTCA+AGG | - | chr1.4:87219774-87219793 | None:intergenic | 10.0% |
| !! | AAAATGAAATCTGAAAAAAA+GGG | - | chr1.4:87216918-87216937 | None:intergenic | 15.0% |
| !! | AAATAAAAATAGATATGGTT+CGG | + | chr1.4:87219289-87219308 | MS.gene029233:intron | 15.0% |
| !! | AAATCATATATAAACAATGA+TGG | - | chr1.4:87217997-87218016 | None:intergenic | 15.0% |
| !! | AATGTCTTAAATTAAATCTT+TGG | - | chr1.4:87217969-87217988 | None:intergenic | 15.0% |
| !! | ATGTACTTATAATTAAAGAA+TGG | + | chr1.4:87215725-87215744 | MS.gene029233:intron | 15.0% |
| !! | ATGTCTTAAATTAAATCTTT+GGG | - | chr1.4:87217968-87217987 | None:intergenic | 15.0% |
| !! | ATTCATATTTAACTAAATAG+GGG | - | chr1.4:87216050-87216069 | None:intergenic | 15.0% |
| !! | CATTCATATTTAACTAAATA+GGG | - | chr1.4:87216051-87216070 | None:intergenic | 15.0% |
| !! | CTTTCTGTTTAAAAAATTTA+GGG | + | chr1.4:87221388-87221407 | MS.gene029233:intron | 15.0% |
| !! | GAAATAAAATGTATACATTT+AGG | - | chr1.4:87220880-87220899 | None:intergenic | 15.0% |
| !! | TAACCAAATAAAAATAGATA+TGG | + | chr1.4:87219284-87219303 | MS.gene029233:intron | 15.0% |
| !! | TCAAAAAAAAAAAAATCTCA+AGG | - | chr1.4:87220454-87220473 | None:intergenic | 15.0% |
| !! | TCTTTCTGTTTAAAAAATTT+AGG | + | chr1.4:87221387-87221406 | MS.gene029233:intron | 15.0% |
| !! | TTCTTATATTCTATATTAGA+AGG | - | chr1.4:87217721-87217740 | None:intergenic | 15.0% |
| !! | TTGCACTTTATAAAAAAAAT+TGG | - | chr1.4:87216255-87216274 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTATAAAGTGCA+AGG | + | chr1.4:87216254-87216273 | MS.gene029233:intron | 15.0% |
| !!! | CAAAAGTATATTTCTTATAA+TGG | - | chr1.4:87215529-87215548 | None:intergenic | 15.0% |
| !!! | TATTTTTAGTCCTTATATTT+TGG | + | chr1.4:87219497-87219516 | MS.gene029233:intron | 15.0% |
| !!! | TGAGATTTTTTTTTTTTTGA+GGG | + | chr1.4:87220454-87220473 | MS.gene029233:intron | 15.0% |
| !!! | TTGAGATTTTTTTTTTTTTG+AGG | + | chr1.4:87220453-87220472 | MS.gene029233:intron | 15.0% |
| !! | AAAGAATGAACATAAAATGA+AGG | - | chr1.4:87219746-87219765 | None:intergenic | 20.0% |
| !! | AAATATAAATGCAATTTGAG+TGG | + | chr1.4:87218925-87218944 | MS.gene029233:intron | 20.0% |
| !! | AAGAAAATTAAATAGATGGA+AGG | - | chr1.4:87215490-87215509 | None:intergenic | 20.0% |
| !! | AATATAAATGCAATTTGAGT+GGG | + | chr1.4:87218926-87218945 | MS.gene029233:intron | 20.0% |
| !! | AATCAAAACTAAAGTGATTA+TGG | - | chr1.4:87219549-87219568 | None:intergenic | 20.0% |
| !! | ACAATACAAATTTCAAAAAC+AGG | - | chr1.4:87218162-87218181 | None:intergenic | 20.0% |
| !! | ACTACCAAAAAAAAATACAA+TGG | - | chr1.4:87216380-87216399 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAATTAAATAGA+TGG | - | chr1.4:87215494-87215513 | None:intergenic | 20.0% |
| !! | ATATCTTTGAGTGTTAATAA+TGG | + | chr1.4:87217111-87217130 | MS.gene029233:intron | 20.0% |
| !! | ATCAAAACTAAAGTGATTAT+GGG | - | chr1.4:87219548-87219567 | None:intergenic | 20.0% |
| !! | ATTAATGAATCATGAATGTA+AGG | + | chr1.4:87219640-87219659 | MS.gene029233:intron | 20.0% |
| !! | ATTCATATAATATGATTGAC+GGG | - | chr1.4:87215787-87215806 | None:intergenic | 20.0% |
| !! | ATTGAAATAAACATGATTAG+AGG | - | chr1.4:87218235-87218254 | None:intergenic | 20.0% |
| !! | CATTCATATAATATGATTGA+CGG | - | chr1.4:87215788-87215807 | None:intergenic | 20.0% |
| !! | GAAAATGAAATCTGAAAAAA+AGG | - | chr1.4:87216919-87216938 | None:intergenic | 20.0% |
| !! | GACAATGCATAATATATATA+AGG | - | chr1.4:87216424-87216443 | None:intergenic | 20.0% |
| !! | GCATTCATATTTAACTAAAT+AGG | - | chr1.4:87216052-87216071 | None:intergenic | 20.0% |
| !! | GTAATTGTAATTATAATTGC+AGG | + | chr1.4:87217326-87217345 | MS.gene029233:intron | 20.0% |
| !! | TATCTTTGAGTGTTAATAAT+GGG | + | chr1.4:87217112-87217131 | MS.gene029233:intron | 20.0% |
| !! | TTCAATATACGTTATAATAC+AGG | + | chr1.4:87218249-87218268 | MS.gene029233:intron | 20.0% |
| !!! | AACTAAAAAAAGGCTAATTT+TGG | - | chr1.4:87217476-87217495 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTTTTTTTGAGG+GGG | + | chr1.4:87220456-87220475 | MS.gene029233:intron | 20.0% |
| !!! | AGTATATTTCTTATAATGGA+TGG | - | chr1.4:87215525-87215544 | None:intergenic | 20.0% |
| !!! | ATTGTATTTTTTTTTGGTAG+TGG | + | chr1.4:87216379-87216398 | MS.gene029233:intron | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+AGG | + | chr1.4:87219081-87219100 | MS.gene029233:intron | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | + | chr1.4:87219075-87219094 | MS.gene029233:intron | 20.0% |
| !!! | GAACCATATCTATTTTTATT+TGG | - | chr1.4:87219290-87219309 | None:intergenic | 20.0% |
| !!! | GAGATTTTTTTTTTTTTGAG+GGG | + | chr1.4:87220455-87220474 | MS.gene029233:intron | 20.0% |
| !!! | GCATATTTGAAAATTTTACA+GGG | + | chr1.4:87215927-87215946 | MS.gene029233:intron | 20.0% |
| !!! | TACTCCATTGTATTTTTTTT+TGG | + | chr1.4:87216373-87216392 | MS.gene029233:intron | 20.0% |
| !!! | TCTATCTCTTAATTTTTTCA+TGG | + | chr1.4:87215863-87215882 | MS.gene029233:intron | 20.0% |
| !!! | TTTATTTTTTGAGCAATTCA+CGG | - | chr1.4:87216500-87216519 | None:intergenic | 20.0% |
| ! | AAAAAATACAATGGAGTACA+AGG | - | chr1.4:87216371-87216390 | None:intergenic | 25.0% |
| ! | AAGTAATACTCATCCAAAAT+AGG | + | chr1.4:87215976-87215995 | MS.gene029233:intron | 25.0% |
| ! | AATGTATTCAAGAATGTAGA+CGG | - | chr1.4:87220536-87220555 | None:intergenic | 25.0% |
| ! | AATTACAATCAGAAACTGAA+TGG | - | chr1.4:87216736-87216755 | None:intergenic | 25.0% |
| ! | ACATAGCTGAAAAAATAAAG+AGG | - | chr1.4:87218680-87218699 | None:intergenic | 25.0% |
| ! | AGGAAATTAATCAAACCTAT+TGG | - | chr1.4:87218572-87218591 | None:intergenic | 25.0% |
| ! | AGTTTCTGCTTTATATATTG+TGG | + | chr1.4:87218596-87218615 | MS.gene029233:intron | 25.0% |
| ! | ATAATTTGGATAGCTTCAAA+AGG | - | chr1.4:87217170-87217189 | None:intergenic | 25.0% |
| ! | ATATAAAGCAGAAACTAAAG+AGG | - | chr1.4:87218592-87218611 | None:intergenic | 25.0% |
| ! | ATATAAATGCAATTTGAGTG+GGG | + | chr1.4:87218927-87218946 | MS.gene029233:intron | 25.0% |
| ! | ATGATGTGTTTGTTTAAATG+GGG | - | chr1.4:87219411-87219430 | None:intergenic | 25.0% |
| ! | ATGGTGTTTGTGAATATATT+TGG | + | chr1.4:87218982-87219001 | MS.gene029233:intron | 25.0% |
| ! | ATTGCTAACGATATTGAATA+AGG | - | chr1.4:87217663-87217682 | None:intergenic | 25.0% |
| ! | CATAATATATATAAGGTCCA+AGG | - | chr1.4:87216417-87216436 | None:intergenic | 25.0% |
| ! | GATGATGTGTTTGTTTAAAT+GGG | - | chr1.4:87219412-87219431 | None:intergenic | 25.0% |
| ! | GGAAATTAATCAAACCTATT+GGG | - | chr1.4:87218571-87218590 | None:intergenic | 25.0% |
| ! | TAAATATGAATGCTAACCAT+TGG | + | chr1.4:87216059-87216078 | MS.gene029233:intron | 25.0% |
| ! | TCAGTTTCTGATTGTAATTT+GGG | + | chr1.4:87216737-87216756 | MS.gene029233:intron | 25.0% |
| ! | TGCTATATTAAAACTACACA+TGG | - | chr1.4:87217901-87217920 | None:intergenic | 25.0% |
| ! | TTCACGGTATTATTATACAA+TGG | - | chr1.4:87216484-87216503 | None:intergenic | 25.0% |
| ! | TTCAGTTTCTGATTGTAATT+TGG | + | chr1.4:87216736-87216755 | MS.gene029233:intron | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | + | chr1.4:87219213-87219232 | MS.gene029233:intron | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | - | chr1.4:87219202-87219221 | None:intergenic | 25.0% |
| !! | GGCATATTTGAAAATTTTAC+AGG | + | chr1.4:87215926-87215945 | MS.gene029233:intron | 25.0% |
| !! | TGATGATGTGTTTGTTTAAA+TGG | - | chr1.4:87219413-87219432 | None:intergenic | 25.0% |
| !! | TTGAATTTCAGAACCTATTT+TGG | - | chr1.4:87215992-87216011 | None:intergenic | 25.0% |
| !! | TTTAGGGTTTGATATTTAGA+CGG | - | chr1.4:87216587-87216606 | None:intergenic | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | - | chr1.4:87219201-87219220 | None:intergenic | 25.0% |
| !!! | AATTAGCCTTTTTTTAGTTG+TGG | + | chr1.4:87217477-87217496 | MS.gene029233:intron | 25.0% |
| !!! | GACTTTATTTGCTGTTTATA+TGG | + | chr1.4:87218743-87218762 | MS.gene029233:CDS | 25.0% |
| !!! | TAAACATGTGTTGATTTTCT+TGG | + | chr1.4:87220818-87220837 | MS.gene029233:intron | 25.0% |
| !!! | TAAGTGTCATTGTTTTTCAA+TGG | + | chr1.4:87221354-87221373 | MS.gene029233:intron | 25.0% |
| !!! | TCTTTGCGCTTTTTTTTATT+TGG | - | chr1.4:87216287-87216306 | None:intergenic | 25.0% |
| !!! | TTATTTTTCTTTCCATTTGC+AGG | + | chr1.4:87217535-87217554 | MS.gene029233:intron | 25.0% |
| !!! | TTCATTACGTTTTGAATAAG+TGG | - | chr1.4:87219696-87219715 | None:intergenic | 25.0% |
| !!! | TTTTTTTAACGGCTAACTAA+CGG | + | chr1.4:87216217-87216236 | MS.gene029233:intron | 25.0% |
| AAAAAATGAGAGAGACATGA+AGG | + | chr1.4:87218345-87218364 | MS.gene029233:CDS | 30.0% | |
| AAAAATTATGTTGTGCTCTC+TGG | + | chr1.4:87221431-87221450 | MS.gene029233:intron | 30.0% | |
| AAAATACCTTTCCAAGACAA+AGG | - | chr1.4:87220422-87220441 | None:intergenic | 30.0% | |
| AAAGATACCACTCATAGATA+CGG | + | chr1.4:87217212-87217231 | MS.gene029233:CDS | 30.0% | |
| AAATTTGACGTATTACGTAC+AGG | - | chr1.4:87219065-87219084 | None:intergenic | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | + | chr1.4:87218847-87218866 | MS.gene029233:CDS | 30.0% | |
| AATGAATCATGAATGTAAGG+CGG | + | chr1.4:87219643-87219662 | MS.gene029233:intron | 30.0% | |
| AATGGAATCGAATTGAATTG+AGG | - | chr1.4:87216713-87216732 | None:intergenic | 30.0% | |
| AATTAAATAGATGGAAGGAG+TGG | - | chr1.4:87215485-87215504 | None:intergenic | 30.0% | |
| ACTACTTATTGAACAGTTGA+TGG | + | chr1.4:87220344-87220363 | MS.gene029233:CDS | 30.0% | |
| ATATCTGAGGAATTGTGTAT+TGG | + | chr1.4:87217026-87217045 | MS.gene029233:CDS | 30.0% | |
| ATCAACTGTTCAATAAGTAG+TGG | - | chr1.4:87220345-87220364 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | - | chr1.4:87220318-87220337 | None:intergenic | 30.0% | |
| ATGGAATCGAATTGAATTGA+GGG | - | chr1.4:87216712-87216731 | None:intergenic | 30.0% | |
| ATGTATTCAAGAATGTAGAC+GGG | - | chr1.4:87220535-87220554 | None:intergenic | 30.0% | |
| CAAAAAATAGTGTAACTGCA+GGG | + | chr1.4:87216314-87216333 | MS.gene029233:intron | 30.0% | |
| CAACAAACTTGAATCAACAA+AGG | + | chr1.4:87221548-87221567 | MS.gene029233:CDS | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | + | chr1.4:87218846-87218865 | MS.gene029233:CDS | 30.0% | |
| CAAGTGTCTAACAGATAATT+GGG | - | chr1.4:87220262-87220281 | None:intergenic | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | + | chr1.4:87218397-87218416 | MS.gene029233:CDS | 30.0% | |
| CAGAGTGATTTACTTTAGAT+TGG | + | chr1.4:87220592-87220611 | MS.gene029233:intron | 30.0% | |
| CATCACATCTGATATAAACT+GGG | - | chr1.4:87220319-87220338 | None:intergenic | 30.0% | |
| CATCCTTAAAATGGTGAAAA+CGG | + | chr1.4:87215838-87215857 | MS.gene029233:intron | 30.0% | |
| GATAGAGTTATTGTTTACGA+GGG | + | chr1.4:87221260-87221279 | MS.gene029233:CDS | 30.0% | |
| GGAATTAATATCTTCTTGTC+CGG | + | chr1.4:87218815-87218834 | MS.gene029233:CDS | 30.0% | |
| GTCTATCCACAACTAAAAAA+AGG | - | chr1.4:87217486-87217505 | None:intergenic | 30.0% | |
| TAAAAGCTTAGATGATGTTC+AGG | + | chr1.4:87219584-87219603 | MS.gene029233:intron | 30.0% | |
| TAACAGATAATTGGGACTTT+GGG | - | chr1.4:87220254-87220273 | None:intergenic | 30.0% | |
| TAATGTTAGACTGTTGTGTT+GGG | - | chr1.4:87218091-87218110 | None:intergenic | 30.0% | |
| TAATTATAATTGCAGGTTGC+CGG | + | chr1.4:87217333-87217352 | MS.gene029233:intron | 30.0% | |
| TATAGGAAGATTATGTGTTG+AGG | + | chr1.4:87216977-87216996 | MS.gene029233:intron | 30.0% | |
| TATCTCCTACATCTCATTTA+CGG | + | chr1.4:87218902-87218921 | MS.gene029233:intron | 30.0% | |
| TATTTCCGTAAATGAGATGT+AGG | - | chr1.4:87218910-87218929 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | - | chr1.4:87220320-87220339 | None:intergenic | 30.0% | |
| TCTGAATATCTATGATGCAT+AGG | + | chr1.4:87219007-87219026 | MS.gene029233:intron | 30.0% | |
| TGACACTTACAGATAAGAAA+AGG | - | chr1.4:87221343-87221362 | None:intergenic | 30.0% | |
| TGATAGAGTTATTGTTTACG+AGG | + | chr1.4:87221259-87221278 | MS.gene029233:CDS | 30.0% | |
| TGATGTGTTTGTTTAAATGG+GGG | - | chr1.4:87219410-87219429 | None:intergenic | 30.0% | |
| TTAATGTTAGACTGTTGTGT+TGG | - | chr1.4:87218092-87218111 | None:intergenic | 30.0% | |
| TTGCTATAGTAGAACAGTAA+TGG | - | chr1.4:87220930-87220949 | None:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | + | chr1.4:87218840-87218859 | MS.gene029233:CDS | 30.0% | |
| ! | AAACCGTTTTCACCATTTTA+AGG | - | chr1.4:87215844-87215863 | None:intergenic | 30.0% |
| ! | AACTAAATAGGGGTTTTCTT+TGG | - | chr1.4:87216040-87216059 | None:intergenic | 30.0% |
| ! | ACATGTATATCTCAGCATTT+TGG | - | chr1.4:87218474-87218493 | None:intergenic | 30.0% |
| ! | ACTAAATAGGGGTTTTCTTT+GGG | - | chr1.4:87216039-87216058 | None:intergenic | 30.0% |
| ! | ATATACTTTTGACATGTAGC+TGG | + | chr1.4:87215538-87215557 | MS.gene029233:intron | 30.0% |
| ! | ATTAGGGTTGTTCTTTTTAG+AGG | - | chr1.4:87216622-87216641 | None:intergenic | 30.0% |
| ! | CAAGCACTCATAATTTTTAC+AGG | + | chr1.4:87215638-87215657 | MS.gene029233:CDS | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | + | chr1.4:87217237-87217256 | MS.gene029233:CDS | 30.0% |
| ! | CTGATTGTAATTTGGGATTT+AGG | + | chr1.4:87216744-87216763 | MS.gene029233:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | - | chr1.4:87219203-87219222 | None:intergenic | 30.0% |
| ! | TTAGGGTTGTTCTTTTTAGA+GGG | - | chr1.4:87216621-87216640 | None:intergenic | 30.0% |
| !! | ATATATTCAGCTTTGAAGCA+TGG | - | chr1.4:87219375-87219394 | None:intergenic | 30.0% |
| !! | ATTCAAGTTTGTTGATCCTT+GGG | - | chr1.4:87221542-87221561 | None:intergenic | 30.0% |
| !! | ATTGTTTGAAAGCGTTATGT+TGG | + | chr1.4:87217740-87217759 | MS.gene029233:intron | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | - | chr1.4:87217239-87217258 | None:intergenic | 30.0% |
| !! | GTTTTCACCATTTTAAGGAT+GGG | - | chr1.4:87215839-87215858 | None:intergenic | 30.0% |
| !! | TATATTCAGCTTTGAAGCAT+GGG | - | chr1.4:87219374-87219393 | None:intergenic | 30.0% |
| !!! | ACCTTTTACTTTTAAAGCGA+AGG | - | chr1.4:87217931-87217950 | None:intergenic | 30.0% |
| !!! | CTGCAGTTACACTATTTTTT+GGG | - | chr1.4:87216315-87216334 | None:intergenic | 30.0% |
| !!! | GAGTACAAGGTTTTTTTTCT+TGG | - | chr1.4:87216358-87216377 | None:intergenic | 30.0% |
| !!! | GTTACACTATTTTTTGGGTT+TGG | - | chr1.4:87216310-87216329 | None:intergenic | 30.0% |
| !!! | TATTTTTTTTTGGTAGTGGC+CGG | + | chr1.4:87216383-87216402 | MS.gene029233:intron | 30.0% |
| !!! | TCATGTCTCTCTCATTTTTT+TGG | - | chr1.4:87218345-87218364 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTCTTGGAAACT+TGG | + | chr1.4:87220826-87220845 | MS.gene029233:intron | 30.0% |
| !!! | TTTTTTTTGCCTTTTCCTTC+TGG | + | chr1.4:87218209-87218228 | MS.gene029233:intron | 30.0% |
| AAAATTAACTGAGTGCCACA+TGG | - | chr1.4:87216193-87216212 | None:intergenic | 35.0% | |
| AAACACACAACAAAGCTAAG+TGG | - | chr1.4:87221004-87221023 | None:intergenic | 35.0% | |
| AAATATGCCCATTTGCAATC+CGG | - | chr1.4:87215915-87215934 | None:intergenic | 35.0% | |
| AACTCAATTGATCAGTGTTG+TGG | - | chr1.4:87215685-87215704 | None:intergenic | 35.0% | |
| AGCAAAACCCATCCTTAAAA+TGG | + | chr1.4:87215829-87215848 | MS.gene029233:intron | 35.0% | |
| ATATATGTTTGATGTGCAGC+TGG | + | chr1.4:87215565-87215584 | MS.gene029233:intron | 35.0% | |
| ATATCACTGTGAACTGTCAT+TGG | + | chr1.4:87218619-87218638 | MS.gene029233:intron | 35.0% | |
| ATGAATCATGAATGTAAGGC+GGG | + | chr1.4:87219644-87219663 | MS.gene029233:intron | 35.0% | |
| CAACACTGAGATTGATTGAA+TGG | + | chr1.4:87218963-87218982 | MS.gene029233:intron | 35.0% | |
| CAATCAGAAACTGAATGGAA+TGG | - | chr1.4:87216731-87216750 | None:intergenic | 35.0% | |
| CAATTCAGATCCTCGAAAAT+GGG | - | chr1.4:87217588-87217607 | None:intergenic | 35.0% | |
| CATCACAAATAGATGTCTAC+AGG | - | chr1.4:87220953-87220972 | None:intergenic | 35.0% | |
| CCAAAAAATAGTGTAACTGC+AGG | + | chr1.4:87216313-87216332 | MS.gene029233:intron | 35.0% | |
| CTAACAGATAATTGGGACTT+TGG | - | chr1.4:87220255-87220274 | None:intergenic | 35.0% | |
| GAAGATTGCTTACATATCTG+AGG | + | chr1.4:87217013-87217032 | MS.gene029233:CDS | 35.0% | |
| GCAAGTGTCTAACAGATAAT+TGG | - | chr1.4:87220263-87220282 | None:intergenic | 35.0% | |
| GCTACGTTTAATTCTAGTGA+AGG | - | chr1.4:87218037-87218056 | None:intergenic | 35.0% | |
| GGAGCTTATCTCAATTGATA+TGG | - | chr1.4:87216446-87216465 | None:intergenic | 35.0% | |
| GTATCTTTGTCCAAATCCTT+CGG | - | chr1.4:87217200-87217219 | None:intergenic | 35.0% | |
| TAGGGGTCATATTTAACCAA+TGG | - | chr1.4:87216097-87216116 | None:intergenic | 35.0% | |
| TATCTATGATGCATAGGTAC+CGG | + | chr1.4:87219013-87219032 | MS.gene029233:intron | 35.0% | |
| TCACAGATTATTGTGATGCT+GGG | + | chr1.4:87220022-87220041 | MS.gene029233:CDS | 35.0% | |
| TCACATCTGATATAAACTGG+GGG | - | chr1.4:87220317-87220336 | None:intergenic | 35.0% | |
| TCCAACACATTCATTGTGTT+GGG | + | chr1.4:87217833-87217852 | MS.gene029233:intron | 35.0% | |
| TTCACAGATTATTGTGATGC+TGG | + | chr1.4:87220021-87220040 | MS.gene029233:CDS | 35.0% | |
| TTGAAACCTGACACTATAGA+AGG | + | chr1.4:87220171-87220190 | MS.gene029233:CDS | 35.0% | |
| TTGGTAAATGCTAGAACCAT+TGG | + | chr1.4:87216078-87216097 | MS.gene029233:intron | 35.0% | |
| TTGTATGATACGTTGAACTC+AGG | - | chr1.4:87220216-87220235 | None:intergenic | 35.0% | |
| TTGTGGATAGACATGATTTG+AGG | + | chr1.4:87217494-87217513 | MS.gene029233:intron | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | - | chr1.4:87221290-87221309 | None:intergenic | 35.0% | |
| ! | ACATTCTTGACGACACTTTT+TGG | - | chr1.4:87216851-87216870 | None:intergenic | 35.0% |
| ! | ACTGCTGTTTATTTCCTCTA+TGG | + | chr1.4:87220690-87220709 | MS.gene029233:intron | 35.0% |
| ! | ATTTTCTGTTGGAACAAAGC+CGG | - | chr1.4:87218837-87218856 | None:intergenic | 35.0% |
| ! | CATTCTAGAGGATGATTTGA+AGG | + | chr1.4:87217625-87217644 | MS.gene029233:CDS | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | - | chr1.4:87218848-87218867 | None:intergenic | 35.0% |
| ! | GTATATCTCAGCATTTTGGA+TGG | - | chr1.4:87218470-87218489 | None:intergenic | 35.0% |
| ! | TTCACCTTCTCCTTTTATTC+AGG | + | chr1.4:87220140-87220159 | MS.gene029233:intron | 35.0% |
| !! | ATGGTTCTAGCATTTACCAA+TGG | - | chr1.4:87216078-87216097 | None:intergenic | 35.0% |
| !! | CATTCTTGACGACACTTTTT+GGG | - | chr1.4:87216850-87216869 | None:intergenic | 35.0% |
| !! | CGTTTTCACCATTTTAAGGA+TGG | - | chr1.4:87215840-87215859 | None:intergenic | 35.0% |
| !! | GAAATTTTGACCCATTTTCG+AGG | + | chr1.4:87217575-87217594 | MS.gene029233:CDS | 35.0% |
| !! | GATTCAAGTTTGTTGATCCT+TGG | - | chr1.4:87221543-87221562 | None:intergenic | 35.0% |
| !! | GCCTTCGCTTTAAAAGTAAA+AGG | + | chr1.4:87217927-87217946 | MS.gene029233:intron | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | + | chr1.4:87218410-87218429 | MS.gene029233:CDS | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | + | chr1.4:87218411-87218430 | MS.gene029233:CDS | 35.0% |
| !! | TTCTTTTTAGAGGGATGGAA+AGG | - | chr1.4:87216612-87216631 | None:intergenic | 35.0% |
| !!! | AACTGTCATTGGTTTTTGTC+GGG | + | chr1.4:87218630-87218649 | MS.gene029233:intron | 35.0% |
| !!! | ATTTTTTTTTGGTAGTGGCC+GGG | + | chr1.4:87216384-87216403 | MS.gene029233:intron | 35.0% |
| !!! | CCTGCAGTTACACTATTTTT+TGG | - | chr1.4:87216316-87216335 | None:intergenic | 35.0% |
| !!! | GAACTGTCATTGGTTTTTGT+CGG | + | chr1.4:87218629-87218648 | MS.gene029233:intron | 35.0% |
| AAAATTTCCTGCCAATCAGG+CGG | - | chr1.4:87217563-87217582 | None:intergenic | 40.0% | |
| AAACATGATTAGAGGCCAGA+AGG | - | chr1.4:87218227-87218246 | None:intergenic | 40.0% | |
| AAACCTGACACTATAGAAGG+TGG | + | chr1.4:87220174-87220193 | MS.gene029233:CDS | 40.0% | |
| AACAAACCGGCCTGAATAAA+AGG | - | chr1.4:87220153-87220172 | None:intergenic | 40.0% | |
| AAGGTGCACAAGTAATCTCA+AGG | - | chr1.4:87220483-87220502 | None:intergenic | 40.0% | |
| AATAGAGAATGGGTCGTTTG+AGG | - | chr1.4:87216663-87216682 | None:intergenic | 40.0% | |
| AATGGGTCGTTTGAGGAAAT+GGG | - | chr1.4:87216656-87216675 | None:intergenic | 40.0% | |
| AATTATGAGTGCTTGAGCAG+TGG | - | chr1.4:87215633-87215652 | None:intergenic | 40.0% | |
| AATTATGTTGTGCTCTCTGG+TGG | + | chr1.4:87221434-87221453 | MS.gene029233:intron | 40.0% | |
| ACATTCCAAAAGCTGTGCAA+GGG | + | chr1.4:87218299-87218318 | MS.gene029233:CDS | 40.0% | |
| ACCACATGGCATGTAATGAT+TGG | + | chr1.4:87216166-87216185 | MS.gene029233:intron | 40.0% | |
| ACCCAACACAATGAATGTGT+TGG | - | chr1.4:87217837-87217856 | None:intergenic | 40.0% | |
| ACGTAATCCGGATTGCAAAT+GGG | + | chr1.4:87215905-87215924 | MS.gene029233:intron | 40.0% | |
| ACTACACATGGCATATCTCT+AGG | - | chr1.4:87217889-87217908 | None:intergenic | 40.0% | |
| AGAAAATCTTAGGTTTCGGG+AGG | + | chr1.4:87218850-87218869 | MS.gene029233:CDS | 40.0% | |
| AGAGCTTACCGAATAGAGAA+TGG | - | chr1.4:87216674-87216693 | None:intergenic | 40.0% | |
| AGAGGGATGGAAAGGAATTT+AGG | - | chr1.4:87216604-87216623 | None:intergenic | 40.0% | |
| AGCATAAGTTTGAGCTTCCT+CGG | - | chr1.4:87219927-87219946 | None:intergenic | 40.0% | |
| AGTGTCAGGTTTCAACAAAC+CGG | - | chr1.4:87220166-87220185 | None:intergenic | 40.0% | |
| ATCTCAAGTCTCAACCATAG+AGG | - | chr1.4:87220707-87220726 | None:intergenic | 40.0% | |
| ATGAGAGAGACATGAAGGAA+AGG | + | chr1.4:87218350-87218369 | MS.gene029233:CDS | 40.0% | |
| ATTAGGACCGTATCTATGAG+TGG | - | chr1.4:87217222-87217241 | None:intergenic | 40.0% | |
| ATTATGAGTGCTTGAGCAGT+GGG | - | chr1.4:87215632-87215651 | None:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | - | chr1.4:87218800-87218819 | None:intergenic | 40.0% | |
| CAAACGACCCATTCTCTATT+CGG | + | chr1.4:87216663-87216682 | MS.gene029233:intron | 40.0% | |
| CAACACAATGAATGTGTTGG+AGG | - | chr1.4:87217834-87217853 | None:intergenic | 40.0% | |
| CAAGAGGTTCAGAATCTTTC+TGG | + | chr1.4:87220369-87220388 | MS.gene029233:CDS | 40.0% | |
| CAGAAAGATTCTGAACCTCT+TGG | - | chr1.4:87220371-87220390 | None:intergenic | 40.0% | |
| CCAAAACTCAAGGCAATTTC+AGG | + | chr1.4:87219969-87219988 | MS.gene029233:CDS | 40.0% | |
| CCAAATTATCAACTTGCCGA+AGG | + | chr1.4:87217181-87217200 | MS.gene029233:CDS | 40.0% | |
| CCACATGGCATGTAATGATT+GGG | + | chr1.4:87216167-87216186 | MS.gene029233:intron | 40.0% | |
| CCTAGATACAACATCAGAGA+AGG | - | chr1.4:87219880-87219899 | None:intergenic | 40.0% | |
| CCTTCTCTGATGTTGTATCT+AGG | + | chr1.4:87219877-87219896 | MS.gene029233:intron | 40.0% | |
| CTCCAACACATTCATTGTGT+TGG | + | chr1.4:87217832-87217851 | MS.gene029233:intron | 40.0% | |
| CTGAAAGAGCTAAATTACGC+TGG | - | chr1.4:87220575-87220594 | None:intergenic | 40.0% | |
| CTGTTTCACATCCAGATAAC+TGG | - | chr1.4:87218509-87218528 | None:intergenic | 40.0% | |
| GAAATCGTGCTCAACGATAA+AGG | - | chr1.4:87221219-87221238 | None:intergenic | 40.0% | |
| GAATACCAGCATACGAATGA+AGG | - | chr1.4:87220071-87220090 | None:intergenic | 40.0% | |
| GAGCTTACCGAATAGAGAAT+GGG | - | chr1.4:87216673-87216692 | None:intergenic | 40.0% | |
| GAGGAATTGTGTATTGGATG+CGG | + | chr1.4:87217032-87217051 | MS.gene029233:CDS | 40.0% | |
| GAGGGATGGAAAGGAATTTA+GGG | - | chr1.4:87216603-87216622 | None:intergenic | 40.0% | |
| GCAATCCGAATTACGTAATC+CGG | + | chr1.4:87215893-87215912 | MS.gene029233:intron | 40.0% | |
| GCAATCCGGATTACGTAATT+CGG | - | chr1.4:87215901-87215920 | None:intergenic | 40.0% | |
| GCAATTCAGATCCTCGAAAA+TGG | - | chr1.4:87217589-87217608 | None:intergenic | 40.0% | |
| GGAAAATTGAAGCCCAACTT+GGG | + | chr1.4:87217433-87217452 | MS.gene029233:CDS | 40.0% | |
| GGAGGTTTCTCTTACTTTCA+AGG | + | chr1.4:87218868-87218887 | MS.gene029233:CDS | 40.0% | |
| GTCAAAATTTCCTGCCAATC+AGG | - | chr1.4:87217566-87217585 | None:intergenic | 40.0% | |
| GTTATCTGGATGTGAAACAG+AGG | + | chr1.4:87218509-87218528 | MS.gene029233:CDS | 40.0% | |
| GTTATGCCTTTGTCTTGGAA+AGG | + | chr1.4:87220413-87220432 | MS.gene029233:CDS | 40.0% | |
| TACGTAATCCGGATTGCAAA+TGG | + | chr1.4:87215904-87215923 | MS.gene029233:intron | 40.0% | |
| TAGACGGGAAAGAAAAGACA+GGG | - | chr1.4:87220520-87220539 | None:intergenic | 40.0% | |
| TAGAGAAGCCAAATCTGTGT+TGG | + | chr1.4:87220743-87220762 | MS.gene029233:intron | 40.0% | |
| TAGTGTAAGGATGCTACCTT+GGG | + | chr1.4:87215589-87215608 | MS.gene029233:CDS | 40.0% | |
| TATCAACTTGCCGAAGGATT+TGG | + | chr1.4:87217187-87217206 | MS.gene029233:CDS | 40.0% | |
| TCATTGTGTTGGGTGTGAAA+GGG | + | chr1.4:87217843-87217862 | MS.gene029233:intron | 40.0% | |
| TCGGAATCAAGATATGCACT+TGG | - | chr1.4:87221137-87221156 | None:intergenic | 40.0% | |
| TCTATCAGATAGATGTCTGC+AGG | - | chr1.4:87221110-87221129 | None:intergenic | 40.0% | |
| TGATGAACCTTCCAGTTATC+TGG | + | chr1.4:87218495-87218514 | MS.gene029233:CDS | 40.0% | |
| TGGAAAATTGAAGCCCAACT+TGG | + | chr1.4:87217432-87217451 | MS.gene029233:CDS | 40.0% | |
| TGGTTGGGACAAATGGAATT+GGG | + | chr1.4:87217383-87217402 | MS.gene029233:CDS | 40.0% | |
| TTACTTCACTCGCATTCTAG+AGG | + | chr1.4:87217613-87217632 | MS.gene029233:CDS | 40.0% | |
| TTCACATCCAGATAACTGGA+AGG | - | chr1.4:87218505-87218524 | None:intergenic | 40.0% | |
| TTCAGGCTTCATGTAGTTGA+AGG | + | chr1.4:87219986-87220005 | MS.gene029233:CDS | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+AGG | + | chr1.4:87217842-87217861 | MS.gene029233:intron | 40.0% | |
| TTGCTGCAAAAGTCATCAAG+AGG | + | chr1.4:87221168-87221187 | MS.gene029233:CDS | 40.0% | |
| TTGGTTGGGACAAATGGAAT+TGG | + | chr1.4:87217382-87217401 | MS.gene029233:CDS | 40.0% | |
| TTTGAGGAAATGGGAGAGTT+GGG | - | chr1.4:87216647-87216666 | None:intergenic | 40.0% | |
| TTTGGTTATTGCGTCGTAGT+TGG | - | chr1.4:87219272-87219291 | None:intergenic | 40.0% | |
| ! | AAATGAAGGTACAGGTACGT+TGG | + | chr1.4:87219089-87219108 | MS.gene029233:intron | 40.0% |
| ! | AGATTTGGCTTCTCTAGTGT+GGG | - | chr1.4:87220739-87220758 | None:intergenic | 40.0% |
| ! | CCTGAAATTGCCTTGAGTTT+TGG | - | chr1.4:87219972-87219991 | None:intergenic | 40.0% |
| ! | GACTTTGGGCTAATTTTCTG+AGG | - | chr1.4:87220240-87220259 | None:intergenic | 40.0% |
| ! | TGACGTTGAAGCAAGCTTTT+TGG | + | chr1.4:87220971-87220990 | MS.gene029233:intron | 40.0% |
| ! | TGCTGTTTATATGGCAAACC+TGG | + | chr1.4:87218752-87218771 | MS.gene029233:CDS | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | + | chr1.4:87218412-87218431 | MS.gene029233:CDS | 40.0% |
| !! | ATTGCCTTGAGTTTTGGTCA+TGG | - | chr1.4:87219966-87219985 | None:intergenic | 40.0% |
| !! | CAAATCTGTGTTGGTGATGT+CGG | + | chr1.4:87220752-87220771 | MS.gene029233:intron | 40.0% |
| !! | CCTTCGGCAAGTTGATAATT+TGG | - | chr1.4:87217184-87217203 | None:intergenic | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | + | chr1.4:87218409-87218428 | MS.gene029233:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | - | chr1.4:87219961-87219980 | None:intergenic | 40.0% |
| !! | GGTTGTTCTTTTTAGAGGGA+TGG | - | chr1.4:87216617-87216636 | None:intergenic | 40.0% |
| !! | TCTTTTTGCTATGCACCACA+TGG | + | chr1.4:87216152-87216171 | MS.gene029233:intron | 40.0% |
| AAAAGCTGTGCAAGGGAATG+TGG | + | chr1.4:87218306-87218325 | MS.gene029233:CDS | 45.0% | |
| AAAGCTGTGCAAGGGAATGT+GGG | + | chr1.4:87218307-87218326 | MS.gene029233:CDS | 45.0% | |
| AAGCATGGGTACTCCAAACA+TGG | - | chr1.4:87219360-87219379 | None:intergenic | 45.0% | |
| AAGCTACACAGGTTTGTGTG+CGG | + | chr1.4:87217248-87217267 | MS.gene029233:intron | 45.0% | |
| AAGGTCCAAGGTTCAAATCC+CGG | - | chr1.4:87216405-87216424 | None:intergenic | 45.0% | |
| AAGTTGTTCGGTCATTGCTC+AGG | + | chr1.4:87218545-87218564 | MS.gene029233:CDS | 45.0% | |
| ACTGTGAAACGACCCAAGTT+GGG | - | chr1.4:87217448-87217467 | None:intergenic | 45.0% | |
| AGGAGTGGTTACAGTTGGAA+TGG | - | chr1.4:87215470-87215489 | None:intergenic | 45.0% | |
| AGGGTGCGTGAGAAATCAAT+AGG | + | chr1.4:87215946-87215965 | MS.gene029233:intron | 45.0% | |
| ATCCCAGTCAGCAATGATTG+TGG | - | chr1.4:87221317-87221336 | None:intergenic | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | - | chr1.4:87221528-87221547 | None:intergenic | 45.0% | |
| ATGGAAGGAGTGGTTACAGT+TGG | - | chr1.4:87215475-87215494 | None:intergenic | 45.0% | |
| ATTGTGATGCTGGGTGAGAA+TGG | + | chr1.4:87220031-87220050 | MS.gene029233:CDS | 45.0% | |
| CAATTGAGATAAGCTCCACG+AGG | + | chr1.4:87216449-87216468 | MS.gene029233:intron | 45.0% | |
| CACATTCCAAAAGCTGTGCA+AGG | + | chr1.4:87218298-87218317 | MS.gene029233:CDS | 45.0% | |
| CAGGGCAGACACAATAACTA+AGG | - | chr1.4:87220502-87220521 | None:intergenic | 45.0% | |
| CATGTAATGATTGGGCCATG+TGG | + | chr1.4:87216175-87216194 | MS.gene029233:intron | 45.0% | |
| CATTGTGTTGGGTGTGAAAG+GGG | + | chr1.4:87217844-87217863 | MS.gene029233:intron | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | + | chr1.4:87219959-87219978 | MS.gene029233:CDS | 45.0% | |
| CCCAATCATTACATGCCATG+TGG | - | chr1.4:87216170-87216189 | None:intergenic | 45.0% | |
| CGACATCACCAACACAGATT+TGG | - | chr1.4:87220754-87220773 | None:intergenic | 45.0% | |
| CGTTGAGCACGATTTCATCA+TGG | + | chr1.4:87221223-87221242 | MS.gene029233:CDS | 45.0% | |
| CTAGTGTAAGGATGCTACCT+TGG | + | chr1.4:87215588-87215607 | MS.gene029233:CDS | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | + | chr1.4:87218794-87218813 | MS.gene029233:CDS | 45.0% | |
| GAATGGGTCGTTTGAGGAAA+TGG | - | chr1.4:87216657-87216676 | None:intergenic | 45.0% | |
| GACAGAGAGCAAAAGAATGC+TGG | + | chr1.4:87221570-87221589 | MS.gene029233:CDS | 45.0% | |
| GAGCAATGACCGAACAACTT+GGG | - | chr1.4:87218545-87218564 | None:intergenic | 45.0% | |
| GAGGTTCAGAATCTTTCTGG+TGG | + | chr1.4:87220372-87220391 | MS.gene029233:CDS | 45.0% | |
| GATCCACCTTCTATAGTGTC+AGG | - | chr1.4:87220180-87220199 | None:intergenic | 45.0% | |
| GATTAGAGGCCAGAAGGAAA+AGG | - | chr1.4:87218221-87218240 | None:intergenic | 45.0% | |
| GCGTGAGAAATCAATAGGGT+GGG | + | chr1.4:87215951-87215970 | MS.gene029233:intron | 45.0% | |
| GGAATGTGGTCAACATACTG+AGG | - | chr1.4:87218286-87218305 | None:intergenic | 45.0% | |
| GGGTGCGTGAGAAATCAATA+GGG | + | chr1.4:87215947-87215966 | MS.gene029233:intron | 45.0% | |
| GTAGACGGGAAAGAAAAGAC+AGG | - | chr1.4:87220521-87220540 | None:intergenic | 45.0% | |
| GTTACAACACCATATGCACC+AGG | - | chr1.4:87218773-87218792 | None:intergenic | 45.0% | |
| GTTGCGTTATGCCTTTGTCT+TGG | + | chr1.4:87220408-87220427 | MS.gene029233:CDS | 45.0% | |
| GTTTGAGGAAATGGGAGAGT+TGG | - | chr1.4:87216648-87216667 | None:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | + | chr1.4:87219344-87219363 | MS.gene029233:intron | 45.0% | |
| TACTGTGAAACGACCCAAGT+TGG | - | chr1.4:87217449-87217468 | None:intergenic | 45.0% | |
| TATGGCAAACCTGGTGCATA+TGG | + | chr1.4:87218761-87218780 | MS.gene029233:CDS | 45.0% | |
| TCCTTGGGCGGAAATTAGTT+GGG | - | chr1.4:87221527-87221546 | None:intergenic | 45.0% | |
| TGAAAGCTGCCCAAGTTGTT+CGG | + | chr1.4:87218533-87218552 | MS.gene029233:CDS | 45.0% | |
| TGAGCAATGACCGAACAACT+TGG | - | chr1.4:87218546-87218565 | None:intergenic | 45.0% | |
| TGCAGCAACAATACGCTGTT+CGG | - | chr1.4:87221156-87221175 | None:intergenic | 45.0% | |
| TGCGTGAGAAATCAATAGGG+TGG | + | chr1.4:87215950-87215969 | MS.gene029233:intron | 45.0% | |
| TGGAATTTCCGCCTTCTTTG+TGG | + | chr1.4:87217760-87217779 | MS.gene029233:intron | 45.0% | |
| TGGATGCGGTATCTGTGTTA+AGG | + | chr1.4:87217046-87217065 | MS.gene029233:CDS | 45.0% | |
| TGTCCACAATCATTGCTGAC+TGG | + | chr1.4:87221311-87221330 | MS.gene029233:CDS | 45.0% | |
| TTAACGGCTAACTAACGGCA+AGG | + | chr1.4:87216222-87216241 | MS.gene029233:intron | 45.0% | |
| TTGAGGAAATGGGAGAGTTG+GGG | - | chr1.4:87216646-87216665 | None:intergenic | 45.0% | |
| TTGGTGCAGCAAAAACGTAC+AGG | - | chr1.4:87219253-87219272 | None:intergenic | 45.0% | |
| TTGTGATGCTGGGTGAGAAT+GGG | + | chr1.4:87220032-87220051 | MS.gene029233:CDS | 45.0% | |
| ! | ACATTCCCTTGCACAGCTTT+TGG | - | chr1.4:87218307-87218326 | None:intergenic | 45.0% |
| ! | AGGGCTGTGATGTTACTTAC+CGG | - | chr1.4:87216899-87216918 | None:intergenic | 45.0% |
| ! | CAGATTTGGCTTCTCTAGTG+TGG | - | chr1.4:87220740-87220759 | None:intergenic | 45.0% |
| ! | CCTTCTCCTTTTATTCAGGC+CGG | + | chr1.4:87220144-87220163 | MS.gene029233:intron | 45.0% |
| ! | CGAGCACGATCTTAGTGTTT+TGG | + | chr1.4:87218709-87218728 | MS.gene029233:CDS | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | - | chr1.4:87219349-87219368 | None:intergenic | 45.0% |
| ! | GGCATATCTCTAGGAAGTGT+GGG | - | chr1.4:87217880-87217899 | None:intergenic | 45.0% |
| ! | GTCCACAATCATTGCTGACT+GGG | + | chr1.4:87221312-87221331 | MS.gene029233:CDS | 45.0% |
| ! | GTCGACTGCACTTAAGGTTT+TGG | + | chr1.4:87217408-87217427 | MS.gene029233:CDS | 45.0% |
| ! | TGGCATATCTCTAGGAAGTG+TGG | - | chr1.4:87217881-87217900 | None:intergenic | 45.0% |
| !! | ACTGCACTTAAGGTTTTGGC+TGG | + | chr1.4:87217412-87217431 | MS.gene029233:CDS | 45.0% |
| !! | ATGATGCATAGGTACCGGTA+CGG | + | chr1.4:87219018-87219037 | MS.gene029233:intron | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | - | chr1.4:87221539-87221558 | None:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | - | chr1.4:87219962-87219981 | None:intergenic | 45.0% |
| !! | CTTGGTTTGGTTGGGACAAA+TGG | + | chr1.4:87217376-87217395 | MS.gene029233:CDS | 45.0% |
| !! | TGAACAGTTGATGGACCAAG+AGG | + | chr1.4:87220353-87220372 | MS.gene029233:CDS | 45.0% |
| !!! | CTTGCACAGCTTTTGGAATG+TGG | - | chr1.4:87218300-87218319 | None:intergenic | 45.0% |
| !! | ATTAAAAAAAATAAAACAAT+AGG | - | chr1.4:87216116-87216135 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATAAAACAATA+GGG | - | chr1.4:87216115-87216134 | None:intergenic | 5.0% |
| !!! | ATTTTTTATTTATTTTTTCA+CGG | - | chr1.4:87216534-87216553 | None:intergenic | 5.0% |
| !!! | TAATTTTAACTTTTTTTTAA+CGG | + | chr1.4:87216206-87216225 | MS.gene029233:intron | 5.0% |
| AAGCTGTGCAAGGGAATGTG+GGG | + | chr1.4:87218308-87218327 | MS.gene029233:CDS | 50.0% | |
| AATCAGGCGGTTCCTGCAAA+TGG | - | chr1.4:87217550-87217569 | None:intergenic | 50.0% | |
| AATGGGAGAGTTGGGGGATT+AGG | - | chr1.4:87216639-87216658 | None:intergenic | 50.0% | |
| ACCCAACTAATTTCCGCCCA+AGG | + | chr1.4:87221523-87221542 | MS.gene029233:CDS | 50.0% | |
| AGATGTCTGCAGGCTGTTGT+AGG | - | chr1.4:87221100-87221119 | None:intergenic | 50.0% | |
| AGCTGCCTAATTGCGGCATT+TGG | + | chr1.4:87217792-87217811 | MS.gene029233:intron | 50.0% | |
| AGTTGTCCTGTCGTCAGAAC+CGG | + | chr1.4:87216877-87216896 | MS.gene029233:CDS | 50.0% | |
| ATGCCGCAATTAGGCAGCTA+AGG | - | chr1.4:87217791-87217810 | None:intergenic | 50.0% | |
| ATGGGAGAGTTGGGGGATTA+GGG | - | chr1.4:87216638-87216657 | None:intergenic | 50.0% | |
| ATGTGCAGCTGGCTAGTGTA+AGG | + | chr1.4:87215576-87215595 | MS.gene029233:intron | 50.0% | |
| ATTTGCAGGAACCGCCTGAT+TGG | + | chr1.4:87217549-87217568 | MS.gene029233:intron | 50.0% | |
| CAACCGCAATGGCAAACCTT+TGG | - | chr1.4:87218444-87218463 | None:intergenic | 50.0% | |
| CAATGGAGTACAAGTCCTCG+TGG | - | chr1.4:87216467-87216486 | None:intergenic | 50.0% | |
| CCATTGTGCAGCTTAGCTGT+GGG | - | chr1.4:87216016-87216035 | None:intergenic | 50.0% | |
| CCGGCCTGAATAAAAGGAGA+AGG | - | chr1.4:87220147-87220166 | None:intergenic | 50.0% | |
| CGTCGCAGTTGTCAACATGT+CGG | + | chr1.4:87216780-87216799 | MS.gene029233:intron | 50.0% | |
| CTAAGGGCGAACCACAAAGA+AGG | - | chr1.4:87217774-87217793 | None:intergenic | 50.0% | |
| GAATGTAAGGCGGGTCTACA+GGG | + | chr1.4:87219653-87219672 | MS.gene029233:intron | 50.0% | |
| GACGACCTTCATTCGTATGC+TGG | + | chr1.4:87220063-87220082 | MS.gene029233:CDS | 50.0% | |
| GCAACCCAAATGCCGCAATT+AGG | - | chr1.4:87217800-87217819 | None:intergenic | 50.0% | |
| GCATCTGTCGTTGCTAACGA+TGG | - | chr1.4:87216824-87216843 | None:intergenic | 50.0% | |
| GCTCCAAAGGTTTGCCATTG+CGG | + | chr1.4:87218438-87218457 | MS.gene029233:CDS | 50.0% | |
| GCTGCCTAATTGCGGCATTT+GGG | + | chr1.4:87217793-87217812 | MS.gene029233:intron | 50.0% | |
| GGTTACAGTTGGAATGGCAG+TGG | - | chr1.4:87215464-87215483 | None:intergenic | 50.0% | |
| TGAATGTAAGGCGGGTCTAC+AGG | + | chr1.4:87219652-87219671 | MS.gene029233:intron | 50.0% | |
| TGAGGAAATGGGAGAGTTGG+GGG | - | chr1.4:87216645-87216664 | None:intergenic | 50.0% | |
| TGCCGCAATTAGGCAGCTAA+GGG | - | chr1.4:87217790-87217809 | None:intergenic | 50.0% | |
| TGGGAAGTCGACTGCACTTA+AGG | + | chr1.4:87217402-87217421 | MS.gene029233:CDS | 50.0% | |
| TGTGTTGGAGGCTGCAATGA+AGG | - | chr1.4:87217822-87217841 | None:intergenic | 50.0% | |
| TTGGATGGCAACAACCGCAA+TGG | - | chr1.4:87218455-87218474 | None:intergenic | 50.0% | |
| ! | TTCAGGTTTGCTCTTGCCCA+AGG | - | chr1.4:87215608-87215627 | None:intergenic | 50.0% |
| !! | ACATGGAGAAGTACCGGTAC+CGG | - | chr1.4:87219343-87219362 | None:intergenic | 50.0% |
| !! | GGCAAGTGCTTGGTTTGGTT+GGG | + | chr1.4:87217368-87217387 | MS.gene029233:CDS | 50.0% |
| !! | TACTTACCGGTTCTGACGAC+AGG | - | chr1.4:87216886-87216905 | None:intergenic | 50.0% |
| ACAGGTACCCGTACCCATAC+CGG | - | chr1.4:87219047-87219066 | None:intergenic | 55.0% | |
| ACCAAACCAAGCACTTGCCC+CGG | - | chr1.4:87217367-87217386 | None:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+CGG | + | chr1.4:87219321-87219340 | MS.gene029233:intron | 55.0% | |
| AGGGCGAACCACAAAGAAGG+CGG | - | chr1.4:87217771-87217790 | None:intergenic | 55.0% | |
| AGTGGCCGGGATTTGAACCT+TGG | + | chr1.4:87216397-87216416 | MS.gene029233:intron | 55.0% | |
| ATGCTGGGTGAGAATGGGAC+AGG | + | chr1.4:87220037-87220056 | MS.gene029233:CDS | 55.0% | |
| CCCACAGCTAAGCTGCACAA+TGG | + | chr1.4:87216013-87216032 | MS.gene029233:intron | 55.0% | |
| CGCCCTTAGCTGCCTAATTG+CGG | + | chr1.4:87217785-87217804 | MS.gene029233:intron | 55.0% | |
| CTAGGTTGCAGAGACTCCAC+AGG | + | chr1.4:87219895-87219914 | MS.gene029233:intron | 55.0% | |
| GCCATTGTGCAGCTTAGCTG+TGG | - | chr1.4:87216017-87216036 | None:intergenic | 55.0% | |
| GGGGGTGAGTGTATGCATCA+CGG | - | chr1.4:87220299-87220318 | None:intergenic | 55.0% | |
| GGTCATTGCTCAGGCCCAAT+AGG | + | chr1.4:87218554-87218573 | MS.gene029233:CDS | 55.0% | |
| GTGCTTGAGCAGTGGGATTC+AGG | - | chr1.4:87215625-87215644 | None:intergenic | 55.0% | |
| TACGGTACCCGGTATGGGTA+CGG | + | chr1.4:87219036-87219055 | MS.gene029233:intron | 55.0% | |
| TGTGTTGGGTGTGAAAGGGG+TGG | + | chr1.4:87217847-87217866 | MS.gene029233:intron | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | + | chr1.4:87218425-87218444 | MS.gene029233:CDS | 55.0% | |
| !! | ATAGGTACCGGTACGGTACC+CGG | + | chr1.4:87219025-87219044 | MS.gene029233:intron | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | - | chr1.4:87219342-87219361 | None:intergenic | 55.0% |
| !! | GGGCAAGTGCTTGGTTTGGT+TGG | + | chr1.4:87217367-87217386 | MS.gene029233:CDS | 55.0% |
| ACCATACGCGTACCCGGTAC+CGG | + | chr1.4:87219327-87219346 | MS.gene029233:intron | 60.0% | |
| ACCGGTACGGTACCCGGTAT+GGG | + | chr1.4:87219031-87219050 | MS.gene029233:intron | 60.0% | |
| ACGGTACCCGGTATGGGTAC+GGG | + | chr1.4:87219037-87219056 | MS.gene029233:intron | 60.0% | |
| CAGGTACCCGTACCCATACC+GGG | - | chr1.4:87219046-87219065 | None:intergenic | 60.0% | |
| GACTCCACAGGAAACTGCCG+AGG | + | chr1.4:87219907-87219926 | MS.gene029233:CDS | 60.0% | |
| GCTTCCTCGGCAGTTTCCTG+TGG | - | chr1.4:87219914-87219933 | None:intergenic | 60.0% | |
| GGCGGGTCTACAGGGTAGTA+AGG | + | chr1.4:87219661-87219680 | MS.gene029233:intron | 60.0% | |
| TACCGGTACGGTACCCGGTA+TGG | + | chr1.4:87219030-87219049 | MS.gene029233:intron | 60.0% | |
| TGTGCAAGGGAATGTGGGGC+AGG | + | chr1.4:87218312-87218331 | MS.gene029233:CDS | 60.0% | |
| ! | ACCCATACCGGGTACCGTAC+CGG | - | chr1.4:87219035-87219054 | None:intergenic | 60.0% |
| !! | ATTGCAGGTTGCCGGTTCCC+AGG | + | chr1.4:87217341-87217360 | MS.gene029233:intron | 60.0% |
| GCAGGAACCGCCTGATTGGC+AGG | + | chr1.4:87217553-87217572 | MS.gene029233:intron | 65.0% | |
| GCCGGGGCAAGTGCTTGGTT+TGG | + | chr1.4:87217363-87217382 | MS.gene029233:CDS | 65.0% | |
| ! | ACCGGTACCGGGTACGCGTA+TGG | - | chr1.4:87219331-87219350 | None:intergenic | 65.0% |
| ACCAAGCACTTGCCCCGGCC+TGG | - | chr1.4:87217362-87217381 | None:intergenic | 70.0% | |
| ACTTGCCCCGGCCTGGGAAC+CGG | - | chr1.4:87217355-87217374 | None:intergenic | 70.0% | |
| CCAAGCACTTGCCCCGGCCT+GGG | - | chr1.4:87217361-87217380 | None:intergenic | 70.0% | |
| !! | AGGTTGCCGGTTCCCAGGCC+GGG | + | chr1.4:87217346-87217365 | MS.gene029233:intron | 70.0% |
| !! | CAGGTTGCCGGTTCCCAGGC+CGG | + | chr1.4:87217345-87217364 | MS.gene029233:intron | 70.0% |
| CCCAGGCCGGGGCAAGTGCT+TGG | + | chr1.4:87217358-87217377 | MS.gene029233:CDS | 75.0% | |
| !! | GGTTGCCGGTTCCCAGGCCG+GGG | + | chr1.4:87217347-87217366 | MS.gene029233:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87215424 | 87221617 | 87215424 | ID=MS.gene029233 |
| chr1.4 | mRNA | 87215424 | 87221617 | 87215424 | ID=MS.gene029233.t1;Parent=MS.gene029233 |
| chr1.4 | exon | 87215424 | 87215477 | 87215424 | ID=MS.gene029233.t1.exon1;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87215424 | 87215477 | 87215424 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87215584 | 87215659 | 87215584 | ID=MS.gene029233.t1.exon2;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87215584 | 87215659 | 87215584 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87216788 | 87216898 | 87216788 | ID=MS.gene029233.t1.exon3;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87216788 | 87216898 | 87216788 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87216982 | 87217067 | 87216982 | ID=MS.gene029233.t1.exon4;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87216982 | 87217067 | 87216982 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87217161 | 87217258 | 87217161 | ID=MS.gene029233.t1.exon5;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87217161 | 87217258 | 87217161 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87217348 | 87217465 | 87217348 | ID=MS.gene029233.t1.exon6;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87217348 | 87217465 | 87217348 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87217557 | 87217646 | 87217557 | ID=MS.gene029233.t1.exon7;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87217557 | 87217646 | 87217557 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87218271 | 87218575 | 87218271 | ID=MS.gene029233.t1.exon8;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87218271 | 87218575 | 87218271 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87218694 | 87218889 | 87218694 | ID=MS.gene029233.t1.exon9;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87218694 | 87218889 | 87218694 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87219899 | 87220084 | 87219899 | ID=MS.gene029233.t1.exon10;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87219899 | 87220084 | 87219899 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87220162 | 87220434 | 87220162 | ID=MS.gene029233.t1.exon11;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87220162 | 87220434 | 87220162 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87221107 | 87221352 | 87221107 | ID=MS.gene029233.t1.exon12;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87221107 | 87221352 | 87221107 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| chr1.4 | exon | 87221498 | 87221617 | 87221498 | ID=MS.gene029233.t1.exon13;Parent=MS.gene029233.t1 |
| chr1.4 | CDS | 87221498 | 87221617 | 87221498 | ID=cds.MS.gene029233.t1;Parent=MS.gene029233.t1 |
| Gene Sequence |
| Protein sequence |
