Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029899.t1 | XP_013468288.1 | 94.6 | 928 | 29 | 2 | 1 | 910 | 1 | 925 | 0.00E+00 | 1570.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029899.t1 | Q9SF47 | 51.4 | 934 | 400 | 15 | 1 | 910 | 1 | 904 | 4.7e-235 | 815.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029899.t1 | A0A072VW73 | 94.6 | 928 | 29 | 2 | 1 | 910 | 1 | 925 | 0.0e+00 | 1570.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029899 | MS.gene054635 | PPI |
| MS.gene38722 | MS.gene029899 | PPI |
| MS.gene029899 | MS.gene48495 | PPI |
| MS.gene012989 | MS.gene029899 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029899.t1 | MTR_1g067380 | 94.181 | 928 | 33 | 2 | 1 | 910 | 1 | 925 | 0.0 | 1783 |
| MS.gene029899.t1 | MTR_7g100370 | 61.277 | 940 | 261 | 21 | 1 | 910 | 1 | 867 | 0.0 | 1057 |
| MS.gene029899.t1 | MTR_3g101590 | 66.667 | 306 | 100 | 1 | 602 | 905 | 522 | 827 | 5.61e-141 | 440 |
| MS.gene029899.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 4.39e-40 | 160 |
| MS.gene029899.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 132 | 375 | 1.08e-134 | 408 |
| MS.gene029899.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 272 | 515 | 8.66e-133 | 408 |
| MS.gene029899.t1 | MTR_1g019740 | 60.440 | 91 | 33 | 2 | 1 | 88 | 1 | 91 | 8.85e-27 | 116 |
| MS.gene029899.t1 | MTR_3g101590 | 65.596 | 218 | 73 | 1 | 602 | 817 | 522 | 739 | 1.06e-88 | 299 |
| MS.gene029899.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 2.30e-40 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029899.t1 | AT3G09560 | 72.155 | 413 | 103 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene029899.t1 | AT3G09560 | 72.155 | 413 | 103 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene029899.t1 | AT3G09560 | 72.155 | 413 | 103 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene029899.t1 | AT3G09560 | 72.155 | 413 | 103 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene029899.t1 | AT5G42870 | 54.604 | 467 | 189 | 6 | 452 | 909 | 477 | 929 | 8.17e-166 | 508 |
| MS.gene029899.t1 | AT5G42870 | 53.747 | 467 | 188 | 7 | 452 | 909 | 477 | 924 | 4.24e-160 | 493 |
| MS.gene029899.t1 | AT5G42870 | 54.067 | 418 | 169 | 6 | 452 | 860 | 477 | 880 | 3.86e-140 | 439 |
Find 211 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTTCAATACCTGTTTC+AGG | 0.195193 | 1.4:-54152847 | None:intergenic |
| GATCATAGTATTTCGGATTC+TGG | 0.200059 | 1.4:+54150119 | MS.gene029899:CDS |
| ATTCTGAAGTTGGAGATTTA+TGG | 0.208971 | 1.4:-54151012 | None:intergenic |
| CATGTTTCCACCAACTTCTT+TGG | 0.239861 | 1.4:+54154273 | MS.gene029899:CDS |
| CATATGTACCTTGATAATTC+CGG | 0.250490 | 1.4:+54149993 | MS.gene029899:CDS |
| TTGGATTAATGTCAGGAAAA+TGG | 0.251410 | 1.4:+54152755 | MS.gene029899:intron |
| ACTACAACTCATGGAATTAT+TGG | 0.260148 | 1.4:+54154400 | MS.gene029899:CDS |
| AGTATCGGTGTCGCATTGTC+TGG | 0.267399 | 1.4:-54150540 | None:intergenic |
| AATCCATTCTATGCGGGATT+TGG | 0.279917 | 1.4:+54154020 | MS.gene029899:CDS |
| GTTGTTAGAATAAGTGTTAA+TGG | 0.298990 | 1.4:+54149954 | MS.gene029899:CDS |
| AAGGAGGCGGATGAGGATAA+AGG | 0.302738 | 1.4:+54150032 | MS.gene029899:CDS |
| GAAGTACACCTTGGTATGTT+AGG | 0.309477 | 1.4:+54149892 | MS.gene029899:CDS |
| TAGACTTGATCATAGTATTT+CGG | 0.316398 | 1.4:+54150112 | MS.gene029899:CDS |
| ATCATAGTATTTCGGATTCT+GGG | 0.332106 | 1.4:+54150120 | MS.gene029899:CDS |
| GACCAAATCCATTCTGGTTT+GGG | 0.332198 | 1.4:+54151259 | MS.gene029899:CDS |
| AAAGGTGACCAAATCCATTC+TGG | 0.332792 | 1.4:+54151253 | MS.gene029899:CDS |
| TGCCTTTAGTTGGCAAAGAT+TGG | 0.332891 | 1.4:+54152343 | MS.gene029899:CDS |
| AATTCATACGGGACTTTAGA+TGG | 0.334398 | 1.4:+54150263 | MS.gene029899:CDS |
| GTCACCTTTACTTGAAGTTT+CGG | 0.339502 | 1.4:-54151239 | None:intergenic |
| GTTCTAGGAATGGCTGCATT+TGG | 0.343203 | 1.4:+54151581 | MS.gene029899:CDS |
| TACCCAAACCAGAATGGATT+TGG | 0.346923 | 1.4:-54151261 | None:intergenic |
| TCCACAGGAATTGCATCTTT+CGG | 0.348332 | 1.4:-54151623 | None:intergenic |
| TTTGATGATTTATCGGAATA+CGG | 0.351594 | 1.4:+54150236 | MS.gene029899:CDS |
| TTGATGCTCATATATACTTA+TGG | 0.355928 | 1.4:+54152055 | MS.gene029899:CDS |
| ATGAATGTAGTTGGGAAAGT+TGG | 0.356341 | 1.4:+54149768 | MS.gene029899:CDS |
| GAACTTAGTTACAGAAAGAT+TGG | 0.358190 | 1.4:+54154059 | MS.gene029899:CDS |
| TTGACCATCTTTAAGATTCA+AGG | 0.360096 | 1.4:-54151885 | None:intergenic |
| GTATTTCTAGATTCCGAGTC+TGG | 0.360338 | 1.4:+54151767 | MS.gene029899:CDS |
| TCAAAAGTGCCTCACCTTCT+CGG | 0.362301 | 1.4:-54152993 | None:intergenic |
| GATTCCGTCCTTTGAATCCT+TGG | 0.366727 | 1.4:-54150182 | None:intergenic |
| CAGGTTAAGTAGGAAGTTCC+TGG | 0.368225 | 1.4:-54152828 | None:intergenic |
| ACAAATAGTCCTGCTTCTTC+TGG | 0.368912 | 1.4:+54150986 | MS.gene029899:CDS |
| TGACCAAATCCATTCTGGTT+TGG | 0.372114 | 1.4:+54151258 | MS.gene029899:CDS |
| AAGGCTGCTCCTCTTGTTCT+AGG | 0.373703 | 1.4:+54151566 | MS.gene029899:CDS |
| CAAGGATGCTATCTGTTCAT+TGG | 0.383147 | 1.4:-54151867 | None:intergenic |
| ATATGTACCTTGATAATTCC+GGG | 0.383316 | 1.4:+54149994 | MS.gene029899:CDS |
| GAAATAACAACAGGTCCATT+AGG | 0.385877 | 1.4:-54152943 | None:intergenic |
| TTGACCCTTCGAAAAGGATT+AGG | 0.387862 | 1.4:-54151704 | None:intergenic |
| ATGGGTTTGGTAGCTGCTGC+TGG | 0.398274 | 1.4:+54151431 | MS.gene029899:CDS |
| GGCAATGGAGAGTTTAGTTC+CGG | 0.400673 | 1.4:+54150455 | MS.gene029899:CDS |
| TGAAGTCCTGATTCTGAAGT+TGG | 0.404508 | 1.4:-54151022 | None:intergenic |
| ACACTCACCAAGACCATCTC+TGG | 0.405325 | 1.4:-54150317 | None:intergenic |
| GTTAGGTTTGGTAAATTTCA+AGG | 0.406463 | 1.4:+54149909 | MS.gene029899:CDS |
| ATTGCATCTTTCGGCTCAAC+AGG | 0.408265 | 1.4:-54151614 | None:intergenic |
| AAATCTCCAACTTCAGAATC+AGG | 0.408685 | 1.4:+54151016 | MS.gene029899:CDS |
| TTCTGCTCTGATTCCGAGAT+AGG | 0.409037 | 1.4:-54150362 | None:intergenic |
| ATCTAGAAATACATCTTCAT+TGG | 0.414020 | 1.4:-54151756 | None:intergenic |
| AGTTTGTTTGTTATTCTGTT+CGG | 0.414097 | 1.4:-54151116 | None:intergenic |
| CAATTCCTGTGGAATATTCC+AGG | 0.414250 | 1.4:+54151633 | MS.gene029899:CDS |
| ATAAATCATCAAAAGAATCT+TGG | 0.418398 | 1.4:-54150226 | None:intergenic |
| CTTCTCGAATTTCGACCTCC+AGG | 0.419917 | 1.4:-54150643 | None:intergenic |
| CGCTGATTATATTAGCAAGC+TGG | 0.421106 | 1.4:+54150493 | MS.gene029899:CDS |
| CCTCTGTGGTCATGAACTTA+AGG | 0.422266 | 1.4:+54151403 | MS.gene029899:CDS |
| AGGAGGCGGATGAGGATAAA+GGG | 0.423802 | 1.4:+54150033 | MS.gene029899:CDS |
| TGGTTATGGTTGTACCGCTT+TGG | 0.424119 | 1.4:+54150565 | MS.gene029899:CDS |
| TTTCGGATTCTGGGGTGCTT+CGG | 0.425911 | 1.4:+54150129 | MS.gene029899:CDS |
| GGCAAAGATTGGACACAATC+TGG | 0.426891 | 1.4:+54152354 | MS.gene029899:CDS |
| GCACCACCAAATGGATGAAA+AGG | 0.426945 | 1.4:-54149828 | None:intergenic |
| CTTCCTACTTAACCTGAAAC+AGG | 0.429313 | 1.4:+54152835 | MS.gene029899:CDS |
| TAGTTCCGGCGAAACTGCTT+GGG | 0.432847 | 1.4:+54150469 | MS.gene029899:CDS |
| ACACCTTGGTATGTTAGGTT+TGG | 0.433450 | 1.4:+54149897 | MS.gene029899:CDS |
| TGAATGTAGTTGGGAAAGTT+GGG | 0.435349 | 1.4:+54149769 | MS.gene029899:CDS |
| CCTATAAATTAGTCGACATC+TGG | 0.437927 | 1.4:-54154435 | None:intergenic |
| GTCCAATCTTTGCCAACTAA+AGG | 0.443917 | 1.4:-54152345 | None:intergenic |
| CTTCTTGACAAACTTTGAGT+GGG | 0.446006 | 1.4:-54150589 | None:intergenic |
| TTGCCAAATCCCGCATAGAA+TGG | 0.455784 | 1.4:-54154023 | None:intergenic |
| TTAGTTCCGGCGAAACTGCT+TGG | 0.456179 | 1.4:+54150468 | MS.gene029899:CDS |
| CTGGACGCAGATGGAGACTT+TGG | 0.458111 | 1.4:+54151681 | MS.gene029899:CDS |
| TGTTCGGTATAATCAGCAAT+AGG | 0.461473 | 1.4:-54151100 | None:intergenic |
| ATGGTCTTGGTGAGTGTTGA+TGG | 0.461897 | 1.4:+54150323 | MS.gene029899:CDS |
| CTCATATATACTTATGGAAG+TGG | 0.463033 | 1.4:+54152061 | MS.gene029899:CDS |
| TCATGAACTTAAGGCAGGTA+TGG | 0.463748 | 1.4:+54151412 | MS.gene029899:CDS |
| GGACAGTTCATGCCTTTAGT+TGG | 0.463774 | 1.4:+54152333 | MS.gene029899:CDS |
| ACCAACTTCTTTGGTCGAGC+AGG | 0.464848 | 1.4:+54154282 | MS.gene029899:CDS |
| CTTATTATCTTCAACTGAAG+TGG | 0.473559 | 1.4:-54151182 | None:intergenic |
| GATGCTATCTGTTCATTGGT+TGG | 0.473752 | 1.4:-54151863 | None:intergenic |
| TTGATGATTTATCGGAATAC+GGG | 0.474307 | 1.4:+54150237 | MS.gene029899:CDS |
| ATGAAGAGGATTCGTCGGTT+GGG | 0.475265 | 1.4:+54150159 | MS.gene029899:CDS |
| TCCTCAATTTCATCTAGGTC+CGG | 0.478482 | 1.4:+54150409 | MS.gene029899:CDS |
| TCTTCTTGACAAACTTTGAG+TGG | 0.479754 | 1.4:-54150590 | None:intergenic |
| ACTTAAGGCAGGTATGGGTT+TGG | 0.479885 | 1.4:+54151418 | MS.gene029899:CDS |
| GATGTACTTGACGTGGGAAA+AGG | 0.482711 | 1.4:+54151547 | MS.gene029899:CDS |
| TGAGTACTCGATGTTGGAGT+TGG | 0.484391 | 1.4:-54151803 | None:intergenic |
| CAATGCGACACCGATACTAA+TGG | 0.484513 | 1.4:+54150545 | MS.gene029899:CDS |
| GAGGTTGAGAAGGATTCATC+AGG | 0.484529 | 1.4:+54151052 | MS.gene029899:CDS |
| TTACTTGAAGTTTCGGCTTG+AGG | 0.486523 | 1.4:-54151232 | None:intergenic |
| GTTTGAAGCCCATCGAATAT+CGG | 0.487032 | 1.4:+54151457 | MS.gene029899:CDS |
| TATATTGACGGCTCCTATCT+CGG | 0.488621 | 1.4:+54150349 | MS.gene029899:CDS |
| TCGAGAAGATCTTTCGCAGC+AGG | 0.488687 | 1.4:+54150658 | MS.gene029899:CDS |
| CACCACCAAATGGATGAAAA+GGG | 0.491241 | 1.4:-54149827 | None:intergenic |
| CCTGTTGTTATTTCACCCGA+TGG | 0.494608 | 1.4:+54152952 | MS.gene029899:CDS |
| CGGGCTTACCCAAACCAGAA+TGG | 0.495211 | 1.4:-54151267 | None:intergenic |
| ATACCTGTTTCAGGTTAAGT+AGG | 0.495257 | 1.4:-54152838 | None:intergenic |
| AGAGAATTCTGTGGACTCGC+AGG | 0.497225 | 1.4:+54150286 | MS.gene029899:CDS |
| GACACCGATACTAATGGTTA+TGG | 0.497528 | 1.4:+54150551 | MS.gene029899:CDS |
| TGCTCCTCTTGTTCTAGGAA+TGG | 0.497537 | 1.4:+54151571 | MS.gene029899:CDS |
| GATTATAATCCATTCTATGC+GGG | 0.501076 | 1.4:+54154014 | MS.gene029899:CDS |
| ATCGTGATTTCAGACGTTGA+TGG | 0.501083 | 1.4:+54152093 | MS.gene029899:CDS |
| TAACCTTCAGTTTCTCTACA+AGG | 0.502045 | 1.4:+54151915 | MS.gene029899:CDS |
| AGAAGAAGCAGGACTATTTG+TGG | 0.502356 | 1.4:-54150984 | None:intergenic |
| TAATAATTCAAGTGAGGTGG+TGG | 0.502796 | 1.4:+54151207 | MS.gene029899:CDS |
| CTCCATCTGCGTCCAGGCGA+GGG | 0.503360 | 1.4:-54151674 | None:intergenic |
| ACATCAACAGCACCACCAAA+TGG | 0.504876 | 1.4:-54149837 | None:intergenic |
| GTATCGGTGTCGCATTGTCT+GGG | 0.506944 | 1.4:-54150539 | None:intergenic |
| AACAACAGGTCCATTAGGTA+AGG | 0.509268 | 1.4:-54152938 | None:intergenic |
| ATTGTCTTGACCCTTCGAAA+AGG | 0.509842 | 1.4:-54151710 | None:intergenic |
| AATCCTCTGCCGATATTCGA+TGG | 0.510384 | 1.4:-54151466 | None:intergenic |
| GATGAAGAGGATTCGTCGGT+TGG | 0.513362 | 1.4:+54150158 | MS.gene029899:CDS |
| AGAAATCCTCAATTTCATCT+AGG | 0.514893 | 1.4:+54150404 | MS.gene029899:CDS |
| CAAAGTCTCCATCTGCGTCC+AGG | 0.514955 | 1.4:-54151680 | None:intergenic |
| AGTGAAGGAAATAATCCATC+GGG | 0.522392 | 1.4:-54152967 | None:intergenic |
| CATTCTGGTTTGGGTAAGCC+CGG | 0.523523 | 1.4:+54151268 | MS.gene029899:CDS |
| GATCAACAATCACCCTCGCC+TGG | 0.524247 | 1.4:+54151662 | MS.gene029899:CDS |
| TTCTCGAATTTCGACCTCCA+GGG | 0.525306 | 1.4:-54150642 | None:intergenic |
| AAGAGATGCTAGTTCGTCAC+TGG | 0.525309 | 1.4:+54150697 | MS.gene029899:CDS |
| CATATGTCGGTCTCCTCAGC+CGG | 0.526383 | 1.4:-54150428 | None:intergenic |
| CCATCGGGTGAAATAACAAC+AGG | 0.526401 | 1.4:-54152952 | None:intergenic |
| CACCCTCGCCTGGACGCAGA+TGG | 0.526617 | 1.4:+54151672 | MS.gene029899:CDS |
| AGTTCCTGGTCAAATATGCC+TGG | 0.527570 | 1.4:-54152814 | None:intergenic |
| TAGAATGGATTATAATCAGA+AGG | 0.530145 | 1.4:-54154008 | None:intergenic |
| CATGAACTTAAGGCAGGTAT+GGG | 0.531651 | 1.4:+54151413 | MS.gene029899:CDS |
| AAGCCTCCCCGGAATTATCA+AGG | 0.532098 | 1.4:-54150001 | None:intergenic |
| GCTGATTATATTAGCAAGCT+GGG | 0.534908 | 1.4:+54150494 | MS.gene029899:CDS |
| TGCAGGAAGACTACAACTCA+TGG | 0.536596 | 1.4:+54154391 | MS.gene029899:intron |
| TTCTCATCCAGAGATGGTCT+TGG | 0.537691 | 1.4:+54150310 | MS.gene029899:CDS |
| ACCTGCTCGACCAAAGAAGT+TGG | 0.540794 | 1.4:-54154283 | None:intergenic |
| ATTCAAAGGACGGAATCTGA+TGG | 0.541125 | 1.4:+54150188 | MS.gene029899:CDS |
| TCAAGATCAAGAGGTTGAGA+AGG | 0.541589 | 1.4:+54151042 | MS.gene029899:CDS |
| TCTCCATCTGCGTCCAGGCG+AGG | 0.542422 | 1.4:-54151675 | None:intergenic |
| TCCATTGCCTTCGCATATGT+CGG | 0.543783 | 1.4:-54150441 | None:intergenic |
| AACTCCAACATCGAGTACTC+AGG | 0.548772 | 1.4:+54151805 | MS.gene029899:CDS |
| GTTGGGAGTTTGATAAGTCA+AGG | 0.551287 | 1.4:+54149786 | MS.gene029899:CDS |
| AGAAAGATTGGAATCCCAAA+GGG | 0.552573 | 1.4:+54154071 | MS.gene029899:CDS |
| GTGGCTATTAGTCAACGTAT+TGG | 0.556400 | 1.4:+54154211 | MS.gene029899:CDS |
| TGCTCGACCAAAGAAGTTGG+TGG | 0.556711 | 1.4:-54154280 | None:intergenic |
| AGCGGCCCAAGCAGTTTCGC+CGG | 0.560082 | 1.4:-54150474 | None:intergenic |
| AACCTTCAGTTTCTCTACAA+GGG | 0.560610 | 1.4:+54151916 | MS.gene029899:CDS |
| CTTCACAAAATAAGCCTCCC+CGG | 0.566704 | 1.4:-54150012 | None:intergenic |
| GAGTGCGCGTGCAATTGTCC+AGG | 0.566883 | 1.4:+54152796 | MS.gene029899:CDS |
| CAAGCCGAAACTTCAAGTAA+AGG | 0.567940 | 1.4:+54151235 | MS.gene029899:CDS |
| ACTCAAAGTTTGTCAAGAAG+AGG | 0.568849 | 1.4:+54150592 | MS.gene029899:CDS |
| GCATCCTTGAATCTTAAAGA+TGG | 0.570712 | 1.4:+54151881 | MS.gene029899:CDS |
| TTCTAAAAGAGTTCCAGACT+CGG | 0.570867 | 1.4:-54151780 | None:intergenic |
| GCAGCCATTCCTAGAACAAG+AGG | 0.571366 | 1.4:-54151575 | None:intergenic |
| ATCCTCTGCCGATATTCGAT+GGG | 0.572162 | 1.4:-54151465 | None:intergenic |
| TTCAAAGGACGGAATCTGAT+GGG | 0.573920 | 1.4:+54150189 | MS.gene029899:CDS |
| CTCGGAATCAGAGCAGAATG+AGG | 0.574005 | 1.4:+54150367 | MS.gene029899:CDS |
| TGTGGTCATGAACTTAAGGC+AGG | 0.574969 | 1.4:+54151407 | MS.gene029899:CDS |
| TTGTCCAGGCATATTTGACC+AGG | 0.577217 | 1.4:+54152810 | MS.gene029899:CDS |
| ACCGACATATGCGAAGGCAA+TGG | 0.577830 | 1.4:+54150440 | MS.gene029899:CDS |
| TGATTGTTGATCATCATCCC+TGG | 0.578404 | 1.4:-54151651 | None:intergenic |
| TCATCCCTGGAATATTCCAC+AGG | 0.580495 | 1.4:-54151638 | None:intergenic |
| GATCCCTGAGTACTCGATGT+TGG | 0.580748 | 1.4:-54151809 | None:intergenic |
| GCCGGACCTAGATGAAATTG+AGG | 0.581165 | 1.4:-54150410 | None:intergenic |
| AGGATTCGTCGGTTGGGCCA+AGG | 0.582001 | 1.4:+54150165 | MS.gene029899:CDS |
| GCGCACTCAGAAACAATAGT+TGG | 0.583699 | 1.4:-54152781 | None:intergenic |
| AAATTTCAAGGTGTTCTCAA+AGG | 0.584146 | 1.4:+54149921 | MS.gene029899:CDS |
| GAATACGGGTCTAATTCATA+CGG | 0.586339 | 1.4:+54150251 | MS.gene029899:CDS |
| AAGTGAAGGAAATAATCCAT+CGG | 0.586577 | 1.4:-54152968 | None:intergenic |
| GTTCAAAATTGCTTGTCTAG+AGG | 0.588437 | 1.4:+54153870 | MS.gene029899:CDS |
| TTCTTGACAAACTTTGAGTG+GGG | 0.591743 | 1.4:-54150588 | None:intergenic |
| CGGTTGGGCCAAGGATTCAA+AGG | 0.592281 | 1.4:+54150174 | MS.gene029899:CDS |
| GGAGGCGGATGAGGATAAAG+GGG | 0.593652 | 1.4:+54150034 | MS.gene029899:CDS |
| AATAGTCCTGCTTCTTCTGG+TGG | 0.594001 | 1.4:+54150989 | MS.gene029899:CDS |
| AATATTCATCATTAACCCGA+AGG | 0.596230 | 1.4:+54154097 | MS.gene029899:CDS |
| GAGAATTCTGTGGACTCGCA+GGG | 0.597501 | 1.4:+54150287 | MS.gene029899:CDS |
| TTATGGCCACCAGAAGAAGC+AGG | 0.598102 | 1.4:-54150995 | None:intergenic |
| TCACCTTCTCGGAAAAGTGA+AGG | 0.598769 | 1.4:-54152982 | None:intergenic |
| ATCAGGACTTCAAGATCAAG+AGG | 0.598812 | 1.4:+54151033 | MS.gene029899:CDS |
| GGACACAATCTGGTGTGGCA+AGG | 0.599007 | 1.4:+54152364 | MS.gene029899:CDS |
| GAATAATAATTCAAGTGAGG+TGG | 0.599747 | 1.4:+54151204 | MS.gene029899:CDS |
| GCAGGGTTCTCATCCAGAGA+TGG | 0.601147 | 1.4:+54150304 | MS.gene029899:CDS |
| CTTAAGTTCATGACCACAGA+GGG | 0.601364 | 1.4:-54151402 | None:intergenic |
| GAAAGATGAAGAGGATTCGT+CGG | 0.604588 | 1.4:+54150154 | MS.gene029899:CDS |
| TAAGAATAATAATTCAAGTG+AGG | 0.607755 | 1.4:+54151201 | MS.gene029899:CDS |
| TCATAGTATTTCGGATTCTG+GGG | 0.608364 | 1.4:+54150121 | MS.gene029899:CDS |
| GCTTCGGTTGAAAGATGAAG+AGG | 0.609083 | 1.4:+54150145 | MS.gene029899:CDS |
| TTAAAGAGATGTACTTGACG+TGG | 0.614804 | 1.4:+54151540 | MS.gene029899:CDS |
| TAAAGAGATGTACTTGACGT+GGG | 0.616671 | 1.4:+54151541 | MS.gene029899:CDS |
| TGGGCCAAGGATTCAAAGGA+CGG | 0.617060 | 1.4:+54150178 | MS.gene029899:CDS |
| ATTTCATCTAGGTCCGGCTG+AGG | 0.617666 | 1.4:+54150415 | MS.gene029899:CDS |
| AATTCCTGTGGAATATTCCA+GGG | 0.618544 | 1.4:+54151634 | MS.gene029899:CDS |
| AGCCCATCGAATATCGGCAG+AGG | 0.618776 | 1.4:+54151463 | MS.gene029899:CDS |
| TTTAGATGGAGAGAATTCTG+TGG | 0.627197 | 1.4:+54150277 | MS.gene029899:CDS |
| AGAATGGATTATAATCAGAA+GGG | 0.627237 | 1.4:-54154007 | None:intergenic |
| ATTGTTGTTCAGCAACAAGA+TGG | 0.627892 | 1.4:+54149861 | MS.gene029899:CDS |
| ACAACCATAACCATTAGTAT+CGG | 0.628845 | 1.4:-54150555 | None:intergenic |
| CAGAAAGATTGGAATCCCAA+AGG | 0.628924 | 1.4:+54154070 | MS.gene029899:CDS |
| AGATGCTAGTTCGTCACTGG+AGG | 0.630996 | 1.4:+54150700 | MS.gene029899:CDS |
| AATACGGGTCTAATTCATAC+GGG | 0.631102 | 1.4:+54150252 | MS.gene029899:CDS |
| AATTAGTCGACATCTGGCAA+TGG | 0.632372 | 1.4:-54154429 | None:intergenic |
| TATGTACCTTGATAATTCCG+GGG | 0.634354 | 1.4:+54149995 | MS.gene029899:CDS |
| ACTCCAACATCGAGTACTCA+GGG | 0.639208 | 1.4:+54151806 | MS.gene029899:CDS |
| GCCGAAAGATGCAATTCCTG+TGG | 0.644290 | 1.4:+54151622 | MS.gene029899:CDS |
| GGATTGGAGATCTCCCTCTG+TGG | 0.647021 | 1.4:+54151389 | MS.gene029899:intron |
| AACTTTGAGTGGGGCCAAAG+CGG | 0.647796 | 1.4:-54150579 | None:intergenic |
| TGATTATAATCCATTCTATG+CGG | 0.649806 | 1.4:+54154013 | MS.gene029899:CDS |
| GACATGTCAGTATCAAATGA+CGG | 0.651466 | 1.4:+54151139 | MS.gene029899:CDS |
| AACCCTTGTAGAGAAACTGA+AGG | 0.651797 | 1.4:-54151918 | None:intergenic |
| GAGGAGACCGACATATGCGA+AGG | 0.656528 | 1.4:+54150434 | MS.gene029899:CDS |
| ACCACCAAATGGATGAAAAG+GGG | 0.657193 | 1.4:-54149826 | None:intergenic |
| TGTTGATGGTCATATATTGA+CGG | 0.659029 | 1.4:+54150337 | MS.gene029899:CDS |
| AGATTGGACACAATCTGGTG+TGG | 0.664917 | 1.4:+54152359 | MS.gene029899:CDS |
| CAGCTTGCTAATATAATCAG+CGG | 0.667836 | 1.4:-54150492 | None:intergenic |
| GTGGAAACATGTCATTGACG+AGG | 0.671751 | 1.4:-54154261 | None:intergenic |
| TTACCAAACCTAACATACCA+AGG | 0.673012 | 1.4:-54149900 | None:intergenic |
| AGAAGCAGGACTATTTGTGG+AGG | 0.675554 | 1.4:-54150981 | None:intergenic |
| GTACATTTAGAAGTACACCT+TGG | 0.677276 | 1.4:+54149883 | MS.gene029899:CDS |
| TGGAAACATGTCATTGACGA+GGG | 0.689709 | 1.4:-54154260 | None:intergenic |
| GTACCTTGATAATTCCGGGG+AGG | 0.695061 | 1.4:+54149998 | MS.gene029899:CDS |
| CCTTAAGTTCATGACCACAG+AGG | 0.761472 | 1.4:-54151403 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTGAATGT+TGG | - | chr1.4:54153962-54153981 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTTTTTTTTGC+AGG | + | chr1.4:54153968-54153987 | MS.gene029899:intron | 10.0% |
| !! | AAAATAAAAACTGATTATGA+TGG | - | chr1.4:54153350-54153369 | None:intergenic | 15.0% |
| !! | AAATAAAAACTGATTATGAT+GGG | - | chr1.4:54153349-54153368 | None:intergenic | 15.0% |
| !! | AATATGTTAATAAAAGTAGT+AGG | + | chr1.4:54153436-54153455 | MS.gene029899:intron | 15.0% |
| !! | ATGACTTAAACAAAAATAAT+GGG | - | chr1.4:54153288-54153307 | None:intergenic | 15.0% |
| !! | TAATCTTAACAAAATTGATT+TGG | + | chr1.4:54153259-54153278 | MS.gene029899:intron | 15.0% |
| !! | TTAATATTTAATGCTTAACT+TGG | + | chr1.4:54152736-54152755 | MS.gene029899:intron | 15.0% |
| !!! | AAATATAGAGGTTTTAATAT+TGG | - | chr1.4:54152904-54152923 | None:intergenic | 15.0% |
| !!! | ACTTTTATTAACATATTTTC+AGG | - | chr1.4:54153433-54153452 | None:intergenic | 15.0% |
| !!! | TTATTCATCTTATAATTTTC+AGG | + | chr1.4:54151368-54151387 | MS.gene029899:intron | 15.0% |
| !!! | TTCCTAAATTTTACAATATT+TGG | + | chr1.4:54153139-54153158 | MS.gene029899:intron | 15.0% |
| !!! | TTTTATGTATTTATTTATGC+AGG | + | chr1.4:54152414-54152433 | MS.gene029899:intron | 15.0% |
| !! | AATAAGTAATAATGCTTCTT+AGG | + | chr1.4:54152139-54152158 | MS.gene029899:intron | 20.0% |
| !! | AGTGGAAAATTTCTTTAATT+AGG | - | chr1.4:54153044-54153063 | None:intergenic | 20.0% |
| !! | ATAAATCATCAAAAGAATCT+TGG | - | chr1.4:54150229-54150248 | None:intergenic | 20.0% |
| !! | ATTAAAACCTCTATATTTAC+AGG | + | chr1.4:54152906-54152925 | MS.gene029899:intron | 20.0% |
| !! | CATGACTTAAACAAAAATAA+TGG | - | chr1.4:54153289-54153308 | None:intergenic | 20.0% |
| !! | GACCAAATATTGTAAAATTT+AGG | - | chr1.4:54153144-54153163 | None:intergenic | 20.0% |
| !! | TAAGAATAATAATTCAAGTG+AGG | + | chr1.4:54151201-54151220 | MS.gene029899:CDS | 20.0% |
| !! | TGAAAATATGTTCTTAGTAA+TGG | + | chr1.4:54153646-54153665 | MS.gene029899:intron | 20.0% |
| !!! | AGATTCTTTTGATGATTTAT+CGG | + | chr1.4:54150229-54150248 | MS.gene029899:CDS | 20.0% |
| !!! | AGTGATAACTTTTTAAGTAA+TGG | + | chr1.4:54150086-54150105 | MS.gene029899:CDS | 20.0% |
| !!! | GACTTGATATATTGTATTTT+TGG | + | chr1.4:54153807-54153826 | MS.gene029899:intron | 20.0% |
| !!! | TATGAACAAATGGTATTTTA+AGG | + | chr1.4:54153116-54153135 | MS.gene029899:intron | 20.0% |
| !!! | TATTTACTTTTTCATTCTAG+TGG | - | chr1.4:54152611-54152630 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGTGAATATTGC+AGG | + | chr1.4:54154374-54154393 | MS.gene029899:intron | 20.0% |
| ! | AAATGATGCAAAAACTAACA+GGG | + | chr1.4:54154184-54154203 | MS.gene029899:intron | 25.0% |
| ! | ATAAAAAATACGCACCTTAA+TGG | - | chr1.4:54152400-54152419 | None:intergenic | 25.0% |
| ! | ATCTAGAAATACATCTTCAT+TGG | - | chr1.4:54151759-54151778 | None:intergenic | 25.0% |
| ! | ATGTTAATAAAAGTAGTAGG+AGG | + | chr1.4:54153439-54153458 | MS.gene029899:intron | 25.0% |
| ! | CCAAAATGCAATTAGTTAAA+TGG | + | chr1.4:54152475-54152494 | MS.gene029899:intron | 25.0% |
| ! | GAAAAAGTAAATACACGAAA+TGG | + | chr1.4:54152618-54152637 | MS.gene029899:intron | 25.0% |
| ! | GATTGCAAATTATGAACAAA+TGG | + | chr1.4:54153106-54153125 | MS.gene029899:intron | 25.0% |
| ! | GTTGTTAGAATAAGTGTTAA+TGG | + | chr1.4:54149954-54149973 | MS.gene029899:CDS | 25.0% |
| ! | TAAATGATGCAAAAACTAAC+AGG | + | chr1.4:54154183-54154202 | MS.gene029899:intron | 25.0% |
| ! | TAGACTTGATCATAGTATTT+CGG | + | chr1.4:54150112-54150131 | MS.gene029899:CDS | 25.0% |
| ! | TCAAACTTGTCATTAAAATG+TGG | - | chr1.4:54154330-54154349 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTGGAATTTG+TGG | - | chr1.4:54154321-54154340 | None:intergenic | 25.0% |
| ! | TGATTATAATCCATTCTATG+CGG | + | chr1.4:54154013-54154032 | MS.gene029899:CDS | 25.0% |
| ! | TTGATATTCATCTACTGTTT+AGG | + | chr1.4:54151959-54151978 | MS.gene029899:intron | 25.0% |
| ! | TTGATGCTCATATATACTTA+TGG | + | chr1.4:54152055-54152074 | MS.gene029899:CDS | 25.0% |
| !! | CCATTTAACTAATTGCATTT+TGG | - | chr1.4:54152478-54152497 | None:intergenic | 25.0% |
| !! | GAAGTTCAAATGTTTTATGT+AGG | + | chr1.4:54153308-54153327 | MS.gene029899:intron | 25.0% |
| !! | TAGTTTTTGCATCATTTAGT+TGG | - | chr1.4:54154181-54154200 | None:intergenic | 25.0% |
| !! | TGAAATAACCAAGTCTTTTA+TGG | + | chr1.4:54152861-54152880 | MS.gene029899:intron | 25.0% |
| !! | TGTTCATTTTCATAAACAAC+AGG | - | chr1.4:54150815-54150834 | None:intergenic | 25.0% |
| !! | TTTGATGATTTATCGGAATA+CGG | + | chr1.4:54150236-54150255 | MS.gene029899:CDS | 25.0% |
| !!! | AGAATGGATTATAATCAGAA+GGG | - | chr1.4:54154010-54154029 | None:intergenic | 25.0% |
| !!! | AGTTTGTTTGTTATTCTGTT+CGG | - | chr1.4:54151119-54151138 | None:intergenic | 25.0% |
| !!! | CATCTTATAATTTTCAGGAT+TGG | + | chr1.4:54151373-54151392 | MS.gene029899:intron | 25.0% |
| !!! | TAGAATGGATTATAATCAGA+AGG | - | chr1.4:54154011-54154030 | None:intergenic | 25.0% |
| !!! | TGAGTTTTGTTTATTAAGAG+AGG | + | chr1.4:54152012-54152031 | MS.gene029899:intron | 25.0% |
| !!! | TTTTGATTCTTAAGTATTGC+CGG | - | chr1.4:54151506-54151525 | None:intergenic | 25.0% |
| AAACCTCTATATTTACAGGA+TGG | + | chr1.4:54152910-54152929 | MS.gene029899:intron | 30.0% | |
| AAATCGGTAATAATAGCTTC+TGG | - | chr1.4:54152236-54152255 | None:intergenic | 30.0% | |
| AAGTGAAGGAAATAATCCAT+CGG | - | chr1.4:54152971-54152990 | None:intergenic | 30.0% | |
| AATATTCATCATTAACCCGA+AGG | + | chr1.4:54154097-54154116 | MS.gene029899:CDS | 30.0% | |
| AATCGGTAATAATAGCTTCT+GGG | - | chr1.4:54152235-54152254 | None:intergenic | 30.0% | |
| AATTGTTAAGATTCCCACAT+TGG | + | chr1.4:54153396-54153415 | MS.gene029899:intron | 30.0% | |
| ACAACCATAACCATTAGTAT+CGG | - | chr1.4:54150558-54150577 | None:intergenic | 30.0% | |
| ACCATCTTAGAATTTGGATT+GGG | - | chr1.4:54153505-54153524 | None:intergenic | 30.0% | |
| ACTACAACTCATGGAATTAT+TGG | + | chr1.4:54154400-54154419 | MS.gene029899:CDS | 30.0% | |
| ACTCATACCATCTTAGAATT+TGG | - | chr1.4:54153511-54153530 | None:intergenic | 30.0% | |
| AGAAATCCTCAATTTCATCT+AGG | + | chr1.4:54150404-54150423 | MS.gene029899:CDS | 30.0% | |
| AGATAAATCACCACAACTAT+AGG | - | chr1.4:54152708-54152727 | None:intergenic | 30.0% | |
| AGGTATTTCAATTACACAAC+AGG | + | chr1.4:54152032-54152051 | MS.gene029899:intron | 30.0% | |
| ATAAACACAAAGGTAATGCA+TGG | - | chr1.4:54153739-54153758 | None:intergenic | 30.0% | |
| ATCATAGTATTTCGGATTCT+GGG | + | chr1.4:54150120-54150139 | MS.gene029899:CDS | 30.0% | |
| CTCATATATACTTATGGAAG+TGG | + | chr1.4:54152061-54152080 | MS.gene029899:CDS | 30.0% | |
| CTTATTATCTTCAACTGAAG+TGG | - | chr1.4:54151185-54151204 | None:intergenic | 30.0% | |
| GAACTTAGTTACAGAAAGAT+TGG | + | chr1.4:54154059-54154078 | MS.gene029899:CDS | 30.0% | |
| GAATAATAATTCAAGTGAGG+TGG | + | chr1.4:54151204-54151223 | MS.gene029899:CDS | 30.0% | |
| GACAATTACCATAAAAGACT+TGG | - | chr1.4:54152872-54152891 | None:intergenic | 30.0% | |
| GATGGAACTATTACAAAGTA+AGG | + | chr1.4:54152111-54152130 | MS.gene029899:intron | 30.0% | |
| GATTATAATCCATTCTATGC+GGG | + | chr1.4:54154014-54154033 | MS.gene029899:CDS | 30.0% | |
| TACCATCTTAGAATTTGGAT+TGG | - | chr1.4:54153506-54153525 | None:intergenic | 30.0% | |
| TCAAAAGCAAAATACAGCTA+TGG | + | chr1.4:54152665-54152684 | MS.gene029899:intron | 30.0% | |
| TTGGATTAATGTCAGGAAAA+TGG | + | chr1.4:54152755-54152774 | MS.gene029899:intron | 30.0% | |
| TTTCCATCCTGTAAATATAG+AGG | - | chr1.4:54152916-54152935 | None:intergenic | 30.0% | |
| ! | AAATTTCAAGGTGTTCTCAA+AGG | + | chr1.4:54149921-54149940 | MS.gene029899:CDS | 30.0% |
| ! | AAGAAATTTTCCACTTGCTT+TGG | + | chr1.4:54153049-54153068 | MS.gene029899:intron | 30.0% |
| ! | AGAAATTTTCCACTTGCTTT+GGG | + | chr1.4:54153050-54153069 | MS.gene029899:intron | 30.0% |
| ! | AGTGACATAATTTTGTGTTC+GGG | - | chr1.4:54153902-54153921 | None:intergenic | 30.0% |
| ! | ATATGTACCTTGATAATTCC+GGG | + | chr1.4:54149994-54150013 | MS.gene029899:CDS | 30.0% |
| ! | ATCTTACAAGCCAATTTTGT+AGG | + | chr1.4:54153467-54153486 | MS.gene029899:intron | 30.0% |
| ! | ATGATGAATATTTTGCCCTT+TGG | - | chr1.4:54154089-54154108 | None:intergenic | 30.0% |
| ! | CAGTGACATAATTTTGTGTT+CGG | - | chr1.4:54153903-54153922 | None:intergenic | 30.0% |
| ! | CATATGTACCTTGATAATTC+CGG | + | chr1.4:54149993-54150012 | MS.gene029899:CDS | 30.0% |
| ! | GTTAGGTTTGGTAAATTTCA+AGG | + | chr1.4:54149909-54149928 | MS.gene029899:CDS | 30.0% |
| ! | GTTATTTCAATACCTGTTTC+AGG | - | chr1.4:54152850-54152869 | None:intergenic | 30.0% |
| ! | TAACTGGAGTAGGATTTTTA+AGG | + | chr1.4:54152452-54152471 | MS.gene029899:intron | 30.0% |
| ! | TCTTACAAGCCAATTTTGTA+GGG | + | chr1.4:54153468-54153487 | MS.gene029899:intron | 30.0% |
| ! | TGATGAATATTTTGCCCTTT+GGG | - | chr1.4:54154088-54154107 | None:intergenic | 30.0% |
| ! | TGTTCATTTTCATCAACTAC+AGG | - | chr1.4:54150761-54150780 | None:intergenic | 30.0% |
| ! | TTATTCATCGATTGTGGATT+GGG | - | chr1.4:54153716-54153735 | None:intergenic | 30.0% |
| ! | TTGATGATTTATCGGAATAC+GGG | + | chr1.4:54150237-54150256 | MS.gene029899:CDS | 30.0% |
| ! | TTGTTCATTTTCGTCAACTA+CGG | - | chr1.4:54150924-54150943 | None:intergenic | 30.0% |
| !! | AGAGCACTTTTCTCAAAAAT+CGG | - | chr1.4:54152252-54152271 | None:intergenic | 30.0% |
| !! | ATTCTGAAGTTGGAGATTTA+TGG | - | chr1.4:54151015-54151034 | None:intergenic | 30.0% |
| !! | TGTTGATGGTCATATATTGA+CGG | + | chr1.4:54150337-54150356 | MS.gene029899:CDS | 30.0% |
| !! | TTGACCATCTTTAAGATTCA+AGG | - | chr1.4:54151888-54151907 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGTGATTGACAAA+TGG | - | chr1.4:54150624-54150643 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCCGCTTCTTTT+AGG | + | chr1.4:54152298-54152317 | MS.gene029899:intron | 30.0% |
| AAAAACAACTTCTCAGCACA+GGG | - | chr1.4:54151298-54151317 | None:intergenic | 35.0% | |
| AAATCCTACTCCAGTTAAAC+TGG | - | chr1.4:54152449-54152468 | None:intergenic | 35.0% | |
| AAATCTCCAACTTCAGAATC+AGG | + | chr1.4:54151016-54151035 | MS.gene029899:CDS | 35.0% | |
| AACCTTCAGTTTCTCTACAA+GGG | + | chr1.4:54151916-54151935 | MS.gene029899:CDS | 35.0% | |
| AATACGGGTCTAATTCATAC+GGG | + | chr1.4:54150252-54150271 | MS.gene029899:CDS | 35.0% | |
| AATGCTTCTTAGGCTACAAA+GGG | + | chr1.4:54152149-54152168 | MS.gene029899:intron | 35.0% | |
| AATTCATACGGGACTTTAGA+TGG | + | chr1.4:54150263-54150282 | MS.gene029899:CDS | 35.0% | |
| AATTCCTGTGGAATATTCCA+GGG | + | chr1.4:54151634-54151653 | MS.gene029899:CDS | 35.0% | |
| ACAGTAGAAGATGCTTCTTA+AGG | - | chr1.4:54152524-54152543 | None:intergenic | 35.0% | |
| ACTCAAAGTTTGTCAAGAAG+AGG | + | chr1.4:54150592-54150611 | MS.gene029899:CDS | 35.0% | |
| AGAAAGATTGGAATCCCAAA+GGG | + | chr1.4:54154071-54154090 | MS.gene029899:CDS | 35.0% | |
| AGCTATGGATGATCTTATTG+CGG | + | chr1.4:54152680-54152699 | MS.gene029899:intron | 35.0% | |
| AGTGAAGGAAATAATCCATC+GGG | - | chr1.4:54152970-54152989 | None:intergenic | 35.0% | |
| ATCGGTAATAATAGCTTCTG+GGG | - | chr1.4:54152234-54152253 | None:intergenic | 35.0% | |
| ATGAATGTAGTTGGGAAAGT+TGG | + | chr1.4:54149768-54149787 | MS.gene029899:CDS | 35.0% | |
| CTTCTTGACAAACTTTGAGT+GGG | - | chr1.4:54150592-54150611 | None:intergenic | 35.0% | |
| GAAATAACAACAGGTCCATT+AGG | - | chr1.4:54152946-54152965 | None:intergenic | 35.0% | |
| GAATACGGGTCTAATTCATA+CGG | + | chr1.4:54150251-54150270 | MS.gene029899:CDS | 35.0% | |
| GACATGTCAGTATCAAATGA+CGG | + | chr1.4:54151139-54151158 | MS.gene029899:CDS | 35.0% | |
| GATCATAGTATTTCGGATTC+TGG | + | chr1.4:54150119-54150138 | MS.gene029899:CDS | 35.0% | |
| GATGGAAAAACCTTACCTAA+TGG | + | chr1.4:54152928-54152947 | MS.gene029899:CDS | 35.0% | |
| GCATCCTTGAATCTTAAAGA+TGG | + | chr1.4:54151881-54151900 | MS.gene029899:CDS | 35.0% | |
| GCTGATTATATTAGCAAGCT+GGG | + | chr1.4:54150494-54150513 | MS.gene029899:CDS | 35.0% | |
| GTCACCTTTACTTGAAGTTT+CGG | - | chr1.4:54151242-54151261 | None:intergenic | 35.0% | |
| GTCCTTAAAAATTGCTTCTG+TGG | - | chr1.4:54151836-54151855 | None:intergenic | 35.0% | |
| GTCTAACTATCCAGTTTAAC+TGG | + | chr1.4:54152436-54152455 | MS.gene029899:intron | 35.0% | |
| GTTCAAAATTGCTTGTCTAG+AGG | + | chr1.4:54153870-54153889 | MS.gene029899:CDS | 35.0% | |
| TAAAGAGATGTACTTGACGT+GGG | + | chr1.4:54151541-54151560 | MS.gene029899:CDS | 35.0% | |
| TAACCTTCAGTTTCTCTACA+AGG | + | chr1.4:54151915-54151934 | MS.gene029899:CDS | 35.0% | |
| TAATAATTCAAGTGAGGTGG+TGG | + | chr1.4:54151207-54151226 | MS.gene029899:CDS | 35.0% | |
| TAATGCTTCTTAGGCTACAA+AGG | + | chr1.4:54152148-54152167 | MS.gene029899:intron | 35.0% | |
| TCAGAGACTTGAAATATCCA+GGG | - | chr1.4:54153789-54153808 | None:intergenic | 35.0% | |
| TCATAGTATTTCGGATTCTG+GGG | + | chr1.4:54150121-54150140 | MS.gene029899:CDS | 35.0% | |
| TCTTCTTGACAAACTTTGAG+TGG | - | chr1.4:54150593-54150612 | None:intergenic | 35.0% | |
| TGAATGTAGTTGGGAAAGTT+GGG | + | chr1.4:54149769-54149788 | MS.gene029899:CDS | 35.0% | |
| TGTTCGGTATAATCAGCAAT+AGG | - | chr1.4:54151103-54151122 | None:intergenic | 35.0% | |
| TTAAAGAGATGTACTTGACG+TGG | + | chr1.4:54151540-54151559 | MS.gene029899:CDS | 35.0% | |
| TTACCAAACCTAACATACCA+AGG | - | chr1.4:54149903-54149922 | None:intergenic | 35.0% | |
| TTCTTGACAAACTTTGAGTG+GGG | - | chr1.4:54150591-54150610 | None:intergenic | 35.0% | |
| TTGTCAATCACAAAAAACCC+TGG | + | chr1.4:54150625-54150644 | MS.gene029899:CDS | 35.0% | |
| TTTAGATGGAGAGAATTCTG+TGG | + | chr1.4:54150277-54150296 | MS.gene029899:CDS | 35.0% | |
| ! | AAATTTTCCACTTGCTTTGG+GGG | + | chr1.4:54153052-54153071 | MS.gene029899:intron | 35.0% |
| ! | AGTTTCTCTACAAGGGTTTT+AGG | + | chr1.4:54151923-54151942 | MS.gene029899:CDS | 35.0% |
| ! | ATTGTTGTTCAGCAACAAGA+TGG | + | chr1.4:54149861-54149880 | MS.gene029899:CDS | 35.0% |
| ! | CAAGCAATTTTGAACTCATG+TGG | - | chr1.4:54153865-54153884 | None:intergenic | 35.0% |
| ! | CTCCACAGAAGCAATTTTTA+AGG | + | chr1.4:54151831-54151850 | MS.gene029899:CDS | 35.0% |
| ! | CTTACAAGCCAATTTTGTAG+GGG | + | chr1.4:54153469-54153488 | MS.gene029899:intron | 35.0% |
| ! | GAAATTTTCCACTTGCTTTG+GGG | + | chr1.4:54153051-54153070 | MS.gene029899:intron | 35.0% |
| ! | GCTTAACTTGGATTAATGTC+AGG | + | chr1.4:54152748-54152767 | MS.gene029899:intron | 35.0% |
| ! | GTACATTTAGAAGTACACCT+TGG | + | chr1.4:54149883-54149902 | MS.gene029899:CDS | 35.0% |
| ! | GTTATTCATCGATTGTGGAT+TGG | - | chr1.4:54153717-54153736 | None:intergenic | 35.0% |
| ! | TAATCAAGAAAGCACACCTT+CGG | - | chr1.4:54154116-54154135 | None:intergenic | 35.0% |
| ! | TATGTACCTTGATAATTCCG+GGG | + | chr1.4:54149995-54150014 | MS.gene029899:CDS | 35.0% |
| ! | TGTTCATTTTCGTCAACTAC+GGG | - | chr1.4:54150923-54150942 | None:intergenic | 35.0% |
| ! | TTCTAAAAGAGTTCCAGACT+CGG | - | chr1.4:54151783-54151802 | None:intergenic | 35.0% |
| !! | AAGTGCTCTAAACAGTTTTG+TGG | + | chr1.4:54152263-54152282 | MS.gene029899:intron | 35.0% |
| !! | ACCTTACAAACCAGTTTTGT+AGG | + | chr1.4:54153678-54153697 | MS.gene029899:intron | 35.0% |
| !! | ATACCTGTTTCAGGTTAAGT+AGG | - | chr1.4:54152841-54152860 | None:intergenic | 35.0% |
| !! | CAGCTTGCTAATATAATCAG+CGG | - | chr1.4:54150495-54150514 | None:intergenic | 35.0% |
| !! | CCTTACAAACCAGTTTTGTA+GGG | + | chr1.4:54153679-54153698 | MS.gene029899:intron | 35.0% |
| !! | CTTACAAACCAGTTTTGTAG+GGG | + | chr1.4:54153680-54153699 | MS.gene029899:intron | 35.0% |
| !! | TCTTTTAGGTCTGACGTTTT+GGG | + | chr1.4:54152312-54152331 | MS.gene029899:intron | 35.0% |
| !! | TTCTTTTAGGTCTGACGTTT+TGG | + | chr1.4:54152311-54152330 | MS.gene029899:intron | 35.0% |
| !!! | TATTTTGTCTAGTTCTTCCC+AGG | + | chr1.4:54154153-54154172 | MS.gene029899:intron | 35.0% |
| !!! | TGCTGAGAAGTTGTTTTTCT+TGG | + | chr1.4:54151300-54151319 | MS.gene029899:intron | 35.0% |
| AAAGGTGACCAAATCCATTC+TGG | + | chr1.4:54151253-54151272 | MS.gene029899:CDS | 40.0% | |
| AACAACAGGTCCATTAGGTA+AGG | - | chr1.4:54152941-54152960 | None:intergenic | 40.0% | |
| AACCCTTGTAGAGAAACTGA+AGG | - | chr1.4:54151921-54151940 | None:intergenic | 40.0% | |
| AACGTCAGACCTAAAAGAAG+CGG | - | chr1.4:54152310-54152329 | None:intergenic | 40.0% | |
| AATCCATTCTATGCGGGATT+TGG | + | chr1.4:54154020-54154039 | MS.gene029899:CDS | 40.0% | |
| ACAAATAGTCCTGCTTCTTC+TGG | + | chr1.4:54150986-54151005 | MS.gene029899:CDS | 40.0% | |
| ACACCTTGGTATGTTAGGTT+TGG | + | chr1.4:54149897-54149916 | MS.gene029899:CDS | 40.0% | |
| ACCACCAAATGGATGAAAAG+GGG | - | chr1.4:54149829-54149848 | None:intergenic | 40.0% | |
| AGAAGAAGCAGGACTATTTG+TGG | - | chr1.4:54150987-54151006 | None:intergenic | 40.0% | |
| AGCTCAGAAATGCTCTTACA+AGG | + | chr1.4:54153926-54153945 | MS.gene029899:intron | 40.0% | |
| AGGTCATATCTCATCCAATG+TGG | - | chr1.4:54153413-54153432 | None:intergenic | 40.0% | |
| ATCAGGACTTCAAGATCAAG+AGG | + | chr1.4:54151033-54151052 | MS.gene029899:CDS | 40.0% | |
| ATCGTGATTTCAGACGTTGA+TGG | + | chr1.4:54152093-54152112 | MS.gene029899:CDS | 40.0% | |
| ATTCAAAGGACGGAATCTGA+TGG | + | chr1.4:54150188-54150207 | MS.gene029899:CDS | 40.0% | |
| ATTGTCTTGACCCTTCGAAA+AGG | - | chr1.4:54151713-54151732 | None:intergenic | 40.0% | |
| CAAAAACTAACAGGGTGAAG+TGG | + | chr1.4:54154192-54154211 | MS.gene029899:intron | 40.0% | |
| CAAGCCGAAACTTCAAGTAA+AGG | + | chr1.4:54151235-54151254 | MS.gene029899:CDS | 40.0% | |
| CAAGGATGCTATCTGTTCAT+TGG | - | chr1.4:54151870-54151889 | None:intergenic | 40.0% | |
| CAATTCCTGTGGAATATTCC+AGG | + | chr1.4:54151633-54151652 | MS.gene029899:CDS | 40.0% | |
| CACCACCAAATGGATGAAAA+GGG | - | chr1.4:54149830-54149849 | None:intergenic | 40.0% | |
| CAGAAAGATTGGAATCCCAA+AGG | + | chr1.4:54154070-54154089 | MS.gene029899:CDS | 40.0% | |
| CATGAACTTAAGGCAGGTAT+GGG | + | chr1.4:54151413-54151432 | MS.gene029899:CDS | 40.0% | |
| CATGTTTCCACCAACTTCTT+TGG | + | chr1.4:54154273-54154292 | MS.gene029899:CDS | 40.0% | |
| CTATCCAGTTTAACTGGAGT+AGG | + | chr1.4:54152442-54152461 | MS.gene029899:intron | 40.0% | |
| CTTAAGTTCATGACCACAGA+GGG | - | chr1.4:54151405-54151424 | None:intergenic | 40.0% | |
| CTTCCTACTTAACCTGAAAC+AGG | + | chr1.4:54152835-54152854 | MS.gene029899:CDS | 40.0% | |
| GAAAAACAACTTCTCAGCAC+AGG | - | chr1.4:54151299-54151318 | None:intergenic | 40.0% | |
| GAAAGATGAAGAGGATTCGT+CGG | + | chr1.4:54150154-54150173 | MS.gene029899:CDS | 40.0% | |
| GAAGTACACCTTGGTATGTT+AGG | + | chr1.4:54149892-54149911 | MS.gene029899:CDS | 40.0% | |
| GACACCGATACTAATGGTTA+TGG | + | chr1.4:54150551-54150570 | MS.gene029899:CDS | 40.0% | |
| GATGCTATCTGTTCATTGGT+TGG | - | chr1.4:54151866-54151885 | None:intergenic | 40.0% | |
| GCAAATAGCTCAACAGATCT+AGG | - | chr1.4:54153538-54153557 | None:intergenic | 40.0% | |
| GGTCATATCTCATCCAATGT+GGG | - | chr1.4:54153412-54153431 | None:intergenic | 40.0% | |
| GTAAGCGCACTCATCAAATA+AGG | + | chr1.4:54153180-54153199 | MS.gene029899:intron | 40.0% | |
| GTCAGAGACTTGAAATATCC+AGG | - | chr1.4:54153790-54153809 | None:intergenic | 40.0% | |
| GTCCAATCTTTGCCAACTAA+AGG | - | chr1.4:54152348-54152367 | None:intergenic | 40.0% | |
| GTGGCTATTAGTCAACGTAT+TGG | + | chr1.4:54154211-54154230 | MS.gene029899:CDS | 40.0% | |
| GTTGGGAGTTTGATAAGTCA+AGG | + | chr1.4:54149786-54149805 | MS.gene029899:CDS | 40.0% | |
| TAACTCAACCCCTACAAAAC+TGG | - | chr1.4:54153691-54153710 | None:intergenic | 40.0% | |
| TATATTGACGGCTCCTATCT+CGG | + | chr1.4:54150349-54150368 | MS.gene029899:CDS | 40.0% | |
| TATTGCGGTACCTATAGTTG+TGG | + | chr1.4:54152695-54152714 | MS.gene029899:intron | 40.0% | |
| TCAAGATCAAGAGGTTGAGA+AGG | + | chr1.4:54151042-54151061 | MS.gene029899:CDS | 40.0% | |
| TCAATCACAAAAAACCCTGG+AGG | + | chr1.4:54150628-54150647 | MS.gene029899:CDS | 40.0% | |
| TCACTCAACCCCTACAAAAT+TGG | - | chr1.4:54153480-54153499 | None:intergenic | 40.0% | |
| TCATGAACTTAAGGCAGGTA+TGG | + | chr1.4:54151412-54151431 | MS.gene029899:CDS | 40.0% | |
| TCCACAGGAATTGCATCTTT+CGG | - | chr1.4:54151626-54151645 | None:intergenic | 40.0% | |
| TCCTCAATTTCATCTAGGTC+CGG | + | chr1.4:54150409-54150428 | MS.gene029899:CDS | 40.0% | |
| TCTTATCACTTCCATCCGAA+CGG | - | chr1.4:54153836-54153855 | None:intergenic | 40.0% | |
| TGATTGTTGATCATCATCCC+TGG | - | chr1.4:54151654-54151673 | None:intergenic | 40.0% | |
| TGCCTTTAGTTGGCAAAGAT+TGG | + | chr1.4:54152343-54152362 | MS.gene029899:CDS | 40.0% | |
| TGGAAACATGTCATTGACGA+GGG | - | chr1.4:54154263-54154282 | None:intergenic | 40.0% | |
| TTCAAAGGACGGAATCTGAT+GGG | + | chr1.4:54150189-54150208 | MS.gene029899:CDS | 40.0% | |
| TTGACCCTTCGAAAAGGATT+AGG | - | chr1.4:54151707-54151726 | None:intergenic | 40.0% | |
| ! | AATCAAGAAAGCACACCTTC+GGG | - | chr1.4:54154115-54154134 | None:intergenic | 40.0% |
| ! | AATTTTGTAGGGGTTGAGTG+AGG | + | chr1.4:54153479-54153498 | MS.gene029899:intron | 40.0% |
| ! | CGCTGATTATATTAGCAAGC+TGG | + | chr1.4:54150493-54150512 | MS.gene029899:CDS | 40.0% |
| ! | GCATGGTTATTCATCGATTG+TGG | - | chr1.4:54153722-54153741 | None:intergenic | 40.0% |
| ! | GCCCAATCCAAATTCTAAGA+TGG | + | chr1.4:54153501-54153520 | MS.gene029899:intron | 40.0% |
| ! | GTTTGAAGCCCATCGAATAT+CGG | + | chr1.4:54151457-54151476 | MS.gene029899:CDS | 40.0% |
| ! | TACCCAAACCAGAATGGATT+TGG | - | chr1.4:54151264-54151283 | None:intergenic | 40.0% |
| ! | TAGCTTCTGGGGAAAACTAA+AGG | - | chr1.4:54152223-54152242 | None:intergenic | 40.0% |
| ! | TGACCAAATCCATTCTGGTT+TGG | + | chr1.4:54151258-54151277 | MS.gene029899:CDS | 40.0% |
| ! | TTACTTGAAGTTTCGGCTTG+AGG | - | chr1.4:54151235-54151254 | None:intergenic | 40.0% |
| ! | TTGGCCTAATCCTTTTCGAA+GGG | + | chr1.4:54151700-54151719 | MS.gene029899:CDS | 40.0% |
| ! | TTTGGCCTAATCCTTTTCGA+AGG | + | chr1.4:54151699-54151718 | MS.gene029899:CDS | 40.0% |
| !! | AAGGCTTTTCTGTGCCATTA+AGG | + | chr1.4:54152383-54152402 | MS.gene029899:CDS | 40.0% |
| !! | AATTTTCCACTTGCTTTGGG+GGG | + | chr1.4:54153053-54153072 | MS.gene029899:intron | 40.0% |
| !! | CCCTACAAAACTGGTTTGTA+AGG | - | chr1.4:54153682-54153701 | None:intergenic | 40.0% |
| !! | CTGTTGAGCTATTTGCTATC+AGG | + | chr1.4:54153542-54153561 | MS.gene029899:intron | 40.0% |
| !! | GACCAAATCCATTCTGGTTT+GGG | + | chr1.4:54151259-54151278 | MS.gene029899:CDS | 40.0% |
| !! | GTATTTCTAGATTCCGAGTC+TGG | + | chr1.4:54151767-54151786 | MS.gene029899:CDS | 40.0% |
| !! | TGAAGTCCTGATTCTGAAGT+TGG | - | chr1.4:54151025-54151044 | None:intergenic | 40.0% |
| !! | TTTCCTTCACTTTTCCGAGA+AGG | + | chr1.4:54152979-54152998 | MS.gene029899:CDS | 40.0% |
| !!! | AAGGGTTTTAGGAACACAAC+AGG | + | chr1.4:54151934-54151953 | MS.gene029899:CDS | 40.0% |
| !!! | TTGTATTTTTGGTCCCCGTT+CGG | + | chr1.4:54153818-54153837 | MS.gene029899:intron | 40.0% |
| AACTCCAACATCGAGTACTC+AGG | + | chr1.4:54151805-54151824 | MS.gene029899:CDS | 45.0% | |
| AAGAGATGCTAGTTCGTCAC+TGG | + | chr1.4:54150697-54150716 | MS.gene029899:CDS | 45.0% | |
| AAGCATATCTCATCCAACGC+CGG | - | chr1.4:54153626-54153645 | None:intergenic | 45.0% | |
| AATAGTCCTGCTTCTTCTGG+TGG | + | chr1.4:54150989-54151008 | MS.gene029899:CDS | 45.0% | |
| AATCCTCTGCCGATATTCGA+TGG | - | chr1.4:54151469-54151488 | None:intergenic | 45.0% | |
| ACATCAACAGCACCACCAAA+TGG | - | chr1.4:54149840-54149859 | None:intergenic | 45.0% | |
| ACTCCAACATCGAGTACTCA+GGG | + | chr1.4:54151806-54151825 | MS.gene029899:CDS | 45.0% | |
| ACTTAAGGCAGGTATGGGTT+TGG | + | chr1.4:54151418-54151437 | MS.gene029899:CDS | 45.0% | |
| AGAAGCAGGACTATTTGTGG+AGG | - | chr1.4:54150984-54151003 | None:intergenic | 45.0% | |
| AGATTGGACACAATCTGGTG+TGG | + | chr1.4:54152359-54152378 | MS.gene029899:CDS | 45.0% | |
| AGTTCCTGGTCAAATATGCC+TGG | - | chr1.4:54152817-54152836 | None:intergenic | 45.0% | |
| ATCCAGGGCGCAAAAATAAC+AGG | - | chr1.4:54153774-54153793 | None:intergenic | 45.0% | |
| ATCCTCTGCCGATATTCGAT+GGG | - | chr1.4:54151468-54151487 | None:intergenic | 45.0% | |
| ATTGCATCTTTCGGCTCAAC+AGG | - | chr1.4:54151617-54151636 | None:intergenic | 45.0% | |
| CAATGCGACACCGATACTAA+TGG | + | chr1.4:54150545-54150564 | MS.gene029899:CDS | 45.0% | |
| CAGCGACTGATGATAAATGG+AGG | + | chr1.4:54153204-54153223 | MS.gene029899:intron | 45.0% | |
| CAGGTTAAGTAGGAAGTTCC+TGG | - | chr1.4:54152831-54152850 | None:intergenic | 45.0% | |
| CCATCGGGTGAAATAACAAC+AGG | - | chr1.4:54152955-54152974 | None:intergenic | 45.0% | |
| CCTCTGTGGTCATGAACTTA+AGG | + | chr1.4:54151403-54151422 | MS.gene029899:CDS | 45.0% | |
| CCTTAAGTTCATGACCACAG+AGG | - | chr1.4:54151406-54151425 | None:intergenic | 45.0% | |
| CTCCATTTATCATCAGTCGC+TGG | - | chr1.4:54153206-54153225 | None:intergenic | 45.0% | |
| CTTATCACTTCCATCCGAAC+GGG | - | chr1.4:54153835-54153854 | None:intergenic | 45.0% | |
| CTTCACAAAATAAGCCTCCC+CGG | - | chr1.4:54150015-54150034 | None:intergenic | 45.0% | |
| GAGGTTGAGAAGGATTCATC+AGG | + | chr1.4:54151052-54151071 | MS.gene029899:CDS | 45.0% | |
| GATGTACTTGACGTGGGAAA+AGG | + | chr1.4:54151547-54151566 | MS.gene029899:CDS | 45.0% | |
| GATTCCGTCCTTTGAATCCT+TGG | - | chr1.4:54150185-54150204 | None:intergenic | 45.0% | |
| GCACCACCAAATGGATGAAA+AGG | - | chr1.4:54149831-54149850 | None:intergenic | 45.0% | |
| GCGCACTCAGAAACAATAGT+TGG | - | chr1.4:54152784-54152803 | None:intergenic | 45.0% | |
| GCTATCAGGTCACTGCTATT+GGG | + | chr1.4:54153556-54153575 | MS.gene029899:intron | 45.0% | |
| GCTTCGGTTGAAAGATGAAG+AGG | + | chr1.4:54150145-54150164 | MS.gene029899:CDS | 45.0% | |
| GGACAGTTCATGCCTTTAGT+TGG | + | chr1.4:54152333-54152352 | MS.gene029899:CDS | 45.0% | |
| GGCAAAGATTGGACACAATC+TGG | + | chr1.4:54152354-54152373 | MS.gene029899:CDS | 45.0% | |
| GTCTTAACACACACCCCTAA+AGG | - | chr1.4:54153602-54153621 | None:intergenic | 45.0% | |
| GTGGAAACATGTCATTGACG+AGG | - | chr1.4:54154264-54154283 | None:intergenic | 45.0% | |
| TCACCTTCTCGGAAAAGTGA+AGG | - | chr1.4:54152985-54153004 | None:intergenic | 45.0% | |
| TCATCCCTGGAATATTCCAC+AGG | - | chr1.4:54151641-54151660 | None:intergenic | 45.0% | |
| TCCAGATGTCCAGTCCTTTA+GGG | + | chr1.4:54153585-54153604 | MS.gene029899:intron | 45.0% | |
| TCCATTGCCTTCGCATATGT+CGG | - | chr1.4:54150444-54150463 | None:intergenic | 45.0% | |
| TGAGTACTCGATGTTGGAGT+TGG | - | chr1.4:54151806-54151825 | None:intergenic | 45.0% | |
| TGCAGGAAGACTACAACTCA+TGG | + | chr1.4:54154391-54154410 | MS.gene029899:intron | 45.0% | |
| TGCTATCAGGTCACTGCTAT+TGG | + | chr1.4:54153555-54153574 | MS.gene029899:intron | 45.0% | |
| TGGTTATGGTTGTACCGCTT+TGG | + | chr1.4:54150565-54150584 | MS.gene029899:CDS | 45.0% | |
| TGTGGTCATGAACTTAAGGC+AGG | + | chr1.4:54151407-54151426 | MS.gene029899:CDS | 45.0% | |
| TTATCACTTCCATCCGAACG+GGG | - | chr1.4:54153834-54153853 | None:intergenic | 45.0% | |
| TTCTCATCCAGAGATGGTCT+TGG | + | chr1.4:54150310-54150329 | MS.gene029899:CDS | 45.0% | |
| TTCTCGAATTTCGACCTCCA+GGG | - | chr1.4:54150645-54150664 | None:intergenic | 45.0% | |
| TTCTGCTCTGATTCCGAGAT+AGG | - | chr1.4:54150365-54150384 | None:intergenic | 45.0% | |
| TTGCCAAATCCCGCATAGAA+TGG | - | chr1.4:54154026-54154045 | None:intergenic | 45.0% | |
| TTGTCCAGGCATATTTGACC+AGG | + | chr1.4:54152810-54152829 | MS.gene029899:CDS | 45.0% | |
| ! | ACCCCTTTTCATCCATTTGG+TGG | + | chr1.4:54149825-54149844 | MS.gene029899:CDS | 45.0% |
| ! | ATGAAGAGGATTCGTCGGTT+GGG | + | chr1.4:54150159-54150178 | MS.gene029899:CDS | 45.0% |
| ! | GCATCATTTAGTTGGTGCCT+GGG | - | chr1.4:54154173-54154192 | None:intergenic | 45.0% |
| ! | GCTACCCCTTTTCATCCATT+TGG | + | chr1.4:54149822-54149841 | MS.gene029899:CDS | 45.0% |
| ! | GGATTTTGCAAACTCTGCAC+CGG | + | chr1.4:54151484-54151503 | MS.gene029899:CDS | 45.0% |
| ! | GGCAATGGAGAGTTTAGTTC+CGG | + | chr1.4:54150455-54150474 | MS.gene029899:CDS | 45.0% |
| ! | TGCATCATTTAGTTGGTGCC+TGG | - | chr1.4:54154174-54154193 | None:intergenic | 45.0% |
| !! | ATGGTCTTGGTGAGTGTTGA+TGG | + | chr1.4:54150323-54150342 | MS.gene029899:CDS | 45.0% |
| !! | CCTGTTGTTATTTCACCCGA+TGG | + | chr1.4:54152952-54152971 | MS.gene029899:CDS | 45.0% |
| !! | GTTCTAGGAATGGCTGCATT+TGG | + | chr1.4:54151581-54151600 | MS.gene029899:CDS | 45.0% |
| !! | TCAAAAGTGCCTCACCTTCT+CGG | - | chr1.4:54152996-54153015 | None:intergenic | 45.0% |
| !! | TGCTCCTCTTGTTCTAGGAA+TGG | + | chr1.4:54151571-54151590 | MS.gene029899:CDS | 45.0% |
| !! | TTCACTTTTCCGAGAAGGTG+AGG | + | chr1.4:54152984-54153003 | MS.gene029899:intron | 45.0% |
| !!! | GGAGGCTTATTTTGTGAAGG+AGG | + | chr1.4:54150016-54150035 | MS.gene029899:CDS | 45.0% |
| !!! | GGCTTATTTTGTGAAGGAGG+CGG | + | chr1.4:54150019-54150038 | MS.gene029899:CDS | 45.0% |
| !!! | ATAAAAATTTTAAAATTCTT+CGG | - | chr1.4:54154361-54154380 | None:intergenic | 5.0% |
| AACACACACCCCTAAAGGAC+TGG | - | chr1.4:54153597-54153616 | None:intergenic | 50.0% | |
| AACTTTGAGTGGGGCCAAAG+CGG | - | chr1.4:54150582-54150601 | None:intergenic | 50.0% | |
| AAGCCTCCCCGGAATTATCA+AGG | - | chr1.4:54150004-54150023 | None:intergenic | 50.0% | |
| AAGGAGGCGGATGAGGATAA+AGG | + | chr1.4:54150032-54150051 | MS.gene029899:CDS | 50.0% | |
| AAGGCTGCTCCTCTTGTTCT+AGG | + | chr1.4:54151566-54151585 | MS.gene029899:CDS | 50.0% | |
| ACACTCACCAAGACCATCTC+TGG | - | chr1.4:54150320-54150339 | None:intergenic | 50.0% | |
| ACCAACTTCTTTGGTCGAGC+AGG | + | chr1.4:54154282-54154301 | MS.gene029899:CDS | 50.0% | |
| ACCGACATATGCGAAGGCAA+TGG | + | chr1.4:54150440-54150459 | MS.gene029899:CDS | 50.0% | |
| ACCTGCTCGACCAAAGAAGT+TGG | - | chr1.4:54154286-54154305 | None:intergenic | 50.0% | |
| AGAGAATTCTGTGGACTCGC+AGG | + | chr1.4:54150286-54150305 | MS.gene029899:CDS | 50.0% | |
| AGATGCTAGTTCGTCACTGG+AGG | + | chr1.4:54150700-54150719 | MS.gene029899:CDS | 50.0% | |
| AGGAGGCGGATGAGGATAAA+GGG | + | chr1.4:54150033-54150052 | MS.gene029899:CDS | 50.0% | |
| ATTTCATCTAGGTCCGGCTG+AGG | + | chr1.4:54150415-54150434 | MS.gene029899:CDS | 50.0% | |
| CCAGATGTCCAGTCCTTTAG+GGG | + | chr1.4:54153586-54153605 | MS.gene029899:intron | 50.0% | |
| CTCCAGATGTCCAGTCCTTT+AGG | + | chr1.4:54153584-54153603 | MS.gene029899:intron | 50.0% | |
| CTCGGAATCAGAGCAGAATG+AGG | + | chr1.4:54150367-54150386 | MS.gene029899:CDS | 50.0% | |
| CTTCTCGAATTTCGACCTCC+AGG | - | chr1.4:54150646-54150665 | None:intergenic | 50.0% | |
| GAGAATTCTGTGGACTCGCA+GGG | + | chr1.4:54150287-54150306 | MS.gene029899:CDS | 50.0% | |
| GATCCCTGAGTACTCGATGT+TGG | - | chr1.4:54151812-54151831 | None:intergenic | 50.0% | |
| GATGAAGAGGATTCGTCGGT+TGG | + | chr1.4:54150158-54150177 | MS.gene029899:CDS | 50.0% | |
| GCAGCCATTCCTAGAACAAG+AGG | - | chr1.4:54151578-54151597 | None:intergenic | 50.0% | |
| GCCGAAAGATGCAATTCCTG+TGG | + | chr1.4:54151622-54151641 | MS.gene029899:CDS | 50.0% | |
| GCCGGACCTAGATGAAATTG+AGG | - | chr1.4:54150413-54150432 | None:intergenic | 50.0% | |
| GGCCAGCGACTGATGATAAA+TGG | + | chr1.4:54153201-54153220 | MS.gene029899:intron | 50.0% | |
| TAGTTCCGGCGAAACTGCTT+GGG | + | chr1.4:54150469-54150488 | MS.gene029899:CDS | 50.0% | |
| TCGAGAAGATCTTTCGCAGC+AGG | + | chr1.4:54150658-54150677 | MS.gene029899:CDS | 50.0% | |
| TGCTCGACCAAAGAAGTTGG+TGG | - | chr1.4:54154283-54154302 | None:intergenic | 50.0% | |
| TGGGCCAAGGATTCAAAGGA+CGG | + | chr1.4:54150178-54150197 | MS.gene029899:CDS | 50.0% | |
| TTAGTTCCGGCGAAACTGCT+TGG | + | chr1.4:54150468-54150487 | MS.gene029899:CDS | 50.0% | |
| TTATGGCCACCAGAAGAAGC+AGG | - | chr1.4:54150998-54151017 | None:intergenic | 50.0% | |
| ! | AGGGGTGTGTGTTAAGACTC+CGG | + | chr1.4:54153604-54153623 | MS.gene029899:intron | 50.0% |
| ! | GTACCTTGATAATTCCGGGG+AGG | + | chr1.4:54149998-54150017 | MS.gene029899:CDS | 50.0% |
| ! | TTTTGTGAAGGAGGCGGATG+AGG | + | chr1.4:54150025-54150044 | MS.gene029899:CDS | 50.0% |
| !! | AGTATCGGTGTCGCATTGTC+TGG | - | chr1.4:54150543-54150562 | None:intergenic | 50.0% |
| !! | CATTCTGGTTTGGGTAAGCC+CGG | + | chr1.4:54151268-54151287 | MS.gene029899:CDS | 50.0% |
| !! | GTATCGGTGTCGCATTGTCT+GGG | - | chr1.4:54150542-54150561 | None:intergenic | 50.0% |
| !! | TTTCGGATTCTGGGGTGCTT+CGG | + | chr1.4:54150129-54150148 | MS.gene029899:CDS | 50.0% |
| !!! | ATTTTTGGTCCCCGTTCGGA+TGG | + | chr1.4:54153822-54153841 | MS.gene029899:intron | 50.0% |
| !!! | CACCTGTTATTTTTGCGCCC+TGG | + | chr1.4:54153769-54153788 | MS.gene029899:intron | 50.0% |
| !!! | CGGGGAGGCTTATTTTGTGA+AGG | + | chr1.4:54150013-54150032 | MS.gene029899:CDS | 50.0% |
| AGCCCATCGAATATCGGCAG+AGG | + | chr1.4:54151463-54151482 | MS.gene029899:CDS | 55.0% | |
| CAAAGTCTCCATCTGCGTCC+AGG | - | chr1.4:54151683-54151702 | None:intergenic | 55.0% | |
| CATATGTCGGTCTCCTCAGC+CGG | - | chr1.4:54150431-54150450 | None:intergenic | 55.0% | |
| CCCCTAAAGGACTGGACATC+TGG | - | chr1.4:54153589-54153608 | None:intergenic | 55.0% | |
| CGGGCTTACCCAAACCAGAA+TGG | - | chr1.4:54151270-54151289 | None:intergenic | 55.0% | |
| CGGTTGGGCCAAGGATTCAA+AGG | + | chr1.4:54150174-54150193 | MS.gene029899:CDS | 55.0% | |
| CTGGACGCAGATGGAGACTT+TGG | + | chr1.4:54151681-54151700 | MS.gene029899:CDS | 55.0% | |
| CTTCTCAGCACAGGGCTTAC+CGG | - | chr1.4:54151290-54151309 | None:intergenic | 55.0% | |
| GAGGAGACCGACATATGCGA+AGG | + | chr1.4:54150434-54150453 | MS.gene029899:CDS | 55.0% | |
| GATCAACAATCACCCTCGCC+TGG | + | chr1.4:54151662-54151681 | MS.gene029899:CDS | 55.0% | |
| GCAGGGTTCTCATCCAGAGA+TGG | + | chr1.4:54150304-54150323 | MS.gene029899:CDS | 55.0% | |
| GGACACAATCTGGTGTGGCA+AGG | + | chr1.4:54152364-54152383 | MS.gene029899:CDS | 55.0% | |
| GGAGGCGGATGAGGATAAAG+GGG | + | chr1.4:54150034-54150053 | MS.gene029899:CDS | 55.0% | |
| GGATTGGAGATCTCCCTCTG+TGG | + | chr1.4:54151389-54151408 | MS.gene029899:intron | 55.0% | |
| GTGTGTTAAGACTCCGGCGT+TGG | + | chr1.4:54153610-54153629 | MS.gene029899:intron | 55.0% | |
| TTCTCAGCACAGGGCTTACC+GGG | - | chr1.4:54151289-54151308 | None:intergenic | 55.0% | |
| ! | ATGGGTTTGGTAGCTGCTGC+TGG | + | chr1.4:54151431-54151450 | MS.gene029899:CDS | 55.0% |
| !! | TCCACTTGCTTTGGGGGGTA+GGG | + | chr1.4:54153058-54153077 | MS.gene029899:intron | 55.0% |
| !! | TTCCACTTGCTTTGGGGGGT+AGG | + | chr1.4:54153057-54153076 | MS.gene029899:intron | 55.0% |
| ACCCTACCCCCCAAAGCAAG+TGG | - | chr1.4:54153062-54153081 | None:intergenic | 60.0% | |
| GAGTGCGCGTGCAATTGTCC+AGG | + | chr1.4:54152796-54152815 | MS.gene029899:CDS | 60.0% | |
| ! | AGGATTCGTCGGTTGGGCCA+AGG | + | chr1.4:54150165-54150184 | MS.gene029899:CDS | 60.0% |
| AGCGGCCCAAGCAGTTTCGC+CGG | - | chr1.4:54150477-54150496 | None:intergenic | 65.0% | |
| CTCCATCTGCGTCCAGGCGA+GGG | - | chr1.4:54151677-54151696 | None:intergenic | 65.0% | |
| TCTCCATCTGCGTCCAGGCG+AGG | - | chr1.4:54151678-54151697 | None:intergenic | 65.0% | |
| CACCCTCGCCTGGACGCAGA+TGG | + | chr1.4:54151672-54151691 | MS.gene029899:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 54149768 | 54154449 | 54149768 | ID=MS.gene029899 |
| chr1.4 | mRNA | 54149768 | 54154449 | 54149768 | ID=MS.gene029899.t1;Parent=MS.gene029899 |
| chr1.4 | exon | 54149768 | 54151289 | 54149768 | ID=MS.gene029899.t1.exon1;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54149768 | 54151289 | 54149768 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54151390 | 54151955 | 54151390 | ID=MS.gene029899.t1.exon2;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54151390 | 54151955 | 54151390 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54152054 | 54152127 | 54152054 | ID=MS.gene029899.t1.exon3;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54152054 | 54152127 | 54152054 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54152320 | 54152404 | 54152320 | ID=MS.gene029899.t1.exon4;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54152320 | 54152404 | 54152320 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54152770 | 54152856 | 54152770 | ID=MS.gene029899.t1.exon5;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54152770 | 54152856 | 54152770 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54152928 | 54153000 | 54152928 | ID=MS.gene029899.t1.exon6;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54152928 | 54153000 | 54152928 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54153848 | 54153891 | 54153848 | ID=MS.gene029899.t1.exon7;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54153848 | 54153891 | 54153848 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54153990 | 54154118 | 54153990 | ID=MS.gene029899.t1.exon8;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54153990 | 54154118 | 54153990 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54154205 | 54154303 | 54154205 | ID=MS.gene029899.t1.exon9;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54154205 | 54154303 | 54154205 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| chr1.4 | exon | 54154396 | 54154449 | 54154396 | ID=MS.gene029899.t1.exon10;Parent=MS.gene029899.t1 |
| chr1.4 | CDS | 54154396 | 54154449 | 54154396 | ID=cds.MS.gene029899.t1;Parent=MS.gene029899.t1 |
| Gene Sequence |
| Protein sequence |
