Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054635.t1 | XP_003603031.1 | 92.5 | 835 | 57 | 3 | 1 | 832 | 1 | 832 | 0.00E+00 | 1529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054635.t1 | Q9FMN2 | 43.2 | 971 | 364 | 27 | 1 | 828 | 1 | 926 | 1.3e-170 | 601.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054635.t1 | G7J6C5 | 92.5 | 835 | 57 | 3 | 1 | 832 | 1 | 832 | 0.0e+00 | 1529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene054635 | 0.803503 | 3.38E-49 | -1.69E-46 |
| MS.gene054635 | MS.gene056761 | 0.806154 | 9.44E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene057148 | -0.829641 | 4.60E-55 | -1.69E-46 |
| MS.gene054635 | MS.gene06299 | 0.811885 | 5.60E-51 | -1.69E-46 |
| MS.gene054635 | MS.gene064425 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene054635 | MS.gene067531 | 0.817958 | 2.52E-52 | -1.69E-46 |
| MS.gene054635 | MS.gene067785 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene38722 | 0.976504 | 5.96E-142 | -1.69E-46 |
| MS.gene054635 | MS.gene39053 | 0.853968 | 1.68E-61 | -1.69E-46 |
| MS.gene054635 | MS.gene41626 | 0.81433 | 1.63E-51 | -1.69E-46 |
| MS.gene054635 | MS.gene45789 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene054635 | MS.gene48276 | -0.816419 | 5.58E-52 | -1.69E-46 |
| MS.gene054635 | MS.gene48495 | 0.946143 | 8.09E-105 | -1.69E-46 |
| MS.gene054635 | MS.gene51894 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene054635 | MS.gene51935 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene054635 | MS.gene56130 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene58022 | 0.8533 | 2.62E-61 | -1.69E-46 |
| MS.gene054635 | MS.gene58183 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene68617 | 0.829264 | 5.67E-55 | -1.69E-46 |
| MS.gene054635 | MS.gene77666 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene84733 | 0.800834 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018524 | MS.gene054635 | PPI |
| MS.gene054635 | MS.gene073815 | PPI |
| MS.gene029899 | MS.gene054635 | PPI |
| MS.gene054635 | MS.gene09815 | PPI |
| MS.gene061927 | MS.gene054635 | PPI |
| MS.gene30874 | MS.gene054635 | PPI |
| MS.gene22487 | MS.gene054635 | PPI |
| MS.gene068563 | MS.gene054635 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054635.t1 | MTR_3g101590 | 92.344 | 836 | 58 | 3 | 1 | 833 | 1 | 833 | 0.0 | 1561 |
| MS.gene054635.t1 | MTR_3g101590 | 91.914 | 742 | 54 | 3 | 1 | 739 | 1 | 739 | 0.0 | 1368 |
| MS.gene054635.t1 | MTR_1g019740 | 83.065 | 248 | 41 | 1 | 581 | 827 | 128 | 375 | 2.28e-147 | 438 |
| MS.gene054635.t1 | MTR_1g019740 | 83.065 | 248 | 41 | 1 | 581 | 827 | 268 | 515 | 2.30e-145 | 438 |
| MS.gene054635.t1 | MTR_1g019740 | 44.255 | 235 | 110 | 8 | 1 | 223 | 1 | 226 | 3.33e-42 | 162 |
| MS.gene054635.t1 | MTR_7g100370 | 68.810 | 311 | 84 | 3 | 523 | 827 | 559 | 862 | 2.26e-143 | 445 |
| MS.gene054635.t1 | MTR_7g100370 | 59.375 | 128 | 42 | 3 | 1 | 127 | 1 | 119 | 9.56e-40 | 158 |
| MS.gene054635.t1 | MTR_1g067380 | 66.776 | 304 | 99 | 1 | 524 | 827 | 619 | 920 | 3.84e-139 | 436 |
| MS.gene054635.t1 | MTR_1g067380 | 67.000 | 100 | 33 | 0 | 1 | 100 | 1 | 100 | 1.40e-39 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054635.t1 | AT5G42870 | 71.475 | 305 | 74 | 2 | 527 | 831 | 638 | 929 | 1.04e-151 | 469 |
| MS.gene054635.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 5.12e-50 | 191 |
| MS.gene054635.t1 | AT5G42870 | 70.492 | 305 | 72 | 3 | 527 | 831 | 638 | 924 | 5.18e-147 | 456 |
| MS.gene054635.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 3.70e-50 | 191 |
| MS.gene054635.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 518 | 827 | 587 | 899 | 4.91e-137 | 429 |
| MS.gene054635.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.81e-40 | 160 |
| MS.gene054635.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 518 | 827 | 587 | 899 | 4.91e-137 | 429 |
| MS.gene054635.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.81e-40 | 160 |
| MS.gene054635.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 518 | 827 | 587 | 899 | 4.91e-137 | 429 |
| MS.gene054635.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.81e-40 | 160 |
| MS.gene054635.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 518 | 827 | 587 | 899 | 4.91e-137 | 429 |
| MS.gene054635.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.81e-40 | 160 |
| MS.gene054635.t1 | AT5G42870 | 71.154 | 260 | 62 | 2 | 527 | 786 | 638 | 884 | 4.77e-122 | 390 |
| MS.gene054635.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 5.02e-50 | 190 |
Find 179 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGTTAGTTTGAGATTT+TGG | 0.141100 | 3.4:-89455919 | None:intergenic |
| CGTCTAAGTTTAAGCATTTC+AGG | 0.146908 | 3.4:-89456443 | None:intergenic |
| CCTTGACTGCGGAGAATAAA+TGG | 0.155534 | 3.4:-89458400 | None:intergenic |
| CGAATACTTGGTCTTATGTT+TGG | 0.225017 | 3.4:+89454575 | MS.gene054635:CDS |
| TCTTCTTTATCTATATATTC+AGG | 0.244090 | 3.4:-89456216 | None:intergenic |
| AAAATCTCAAACTAACAATT+TGG | 0.253796 | 3.4:+89455921 | MS.gene054635:CDS |
| TTTCGTCAAGGTCACTAAAA+AGG | 0.268524 | 3.4:-89456158 | None:intergenic |
| TTATTACCAGAAGAAATATT+TGG | 0.281868 | 3.4:-89456351 | None:intergenic |
| CCCGCAGCATCCTCATTTCT+AGG | 0.284851 | 3.4:-89456300 | None:intergenic |
| GAGTCCAGTGATTGACTTAA+AGG | 0.287905 | 3.4:-89456399 | None:intergenic |
| CTCAAATATATCTGTGGAAA+TGG | 0.299611 | 3.4:+89457608 | MS.gene054635:CDS |
| ATGCAAGCGGTGGGGAGATT+AGG | 0.300952 | 3.4:+89454167 | MS.gene054635:CDS |
| CTCATTTCTAGGGATAACTA+TGG | 0.305863 | 3.4:-89456289 | None:intergenic |
| CCTTTCTCCTTGAGCAGATC+AGG | 0.311428 | 3.4:+89457217 | MS.gene054635:CDS |
| AATCCGTTCTATGCTGGTTT+TGG | 0.317235 | 3.4:+89460074 | MS.gene054635:CDS |
| GAATACTTGGTCTTATGTTT+GGG | 0.323830 | 3.4:+89454576 | MS.gene054635:CDS |
| CTGGTGGAAACTGGAGAATT+TGG | 0.328889 | 3.4:+89457194 | MS.gene054635:CDS |
| TCCTTGCCAAATATTTCTTC+TGG | 0.329362 | 3.4:+89456345 | MS.gene054635:CDS |
| TTCAGAATCTTGATAAGCTT+TGG | 0.339252 | 3.4:-89456505 | None:intergenic |
| TCACTGGACTCGGCATTTCC+TGG | 0.342801 | 3.4:+89456411 | MS.gene054635:CDS |
| TGCTCAGAAGTGCTTGTTGC+GGG | 0.342914 | 3.4:-89460338 | None:intergenic |
| GTCATCCTGGCTGTTGTAAC+TGG | 0.344362 | 3.4:-89455998 | None:intergenic |
| ACTCTTCATCTGGTGGAAAC+TGG | 0.364263 | 3.4:+89457185 | MS.gene054635:CDS |
| CCAACGGGATTCCAACCTTA+AGG | 0.364577 | 3.4:-89460124 | None:intergenic |
| TGCAAGCGGTGGGGAGATTA+GGG | 0.368694 | 3.4:+89454168 | MS.gene054635:CDS |
| ATTCAAAATTGCATGCTTAG+AGG | 0.375535 | 3.4:+89459352 | MS.gene054635:CDS |
| TGTTATTATCACATAATTCT+CGG | 0.384405 | 3.4:-89456020 | None:intergenic |
| TGCCTTTGGTTGGTGTTGAC+TGG | 0.386172 | 3.4:+89458360 | MS.gene054635:CDS |
| TAGGAATTGTCGTGTAATAT+AGG | 0.389831 | 3.4:-89458827 | None:intergenic |
| GGTCTTTGAGTTTCATTCTC+AGG | 0.392056 | 3.4:+89455831 | MS.gene054635:CDS |
| AATAAGATTTATTGCCTTCA+CGG | 0.393930 | 3.4:-89459038 | None:intergenic |
| TGATGAAATCAGTTACCTTA+AGG | 0.397156 | 3.4:+89460109 | MS.gene054635:CDS |
| CAAGGCGTATACACCGTTTC+CGG | 0.397395 | 3.4:+89454203 | MS.gene054635:CDS |
| TCTTGGCCAGTTCATGCCTT+TGG | 0.397799 | 3.4:+89458346 | MS.gene054635:CDS |
| TCTAAGCGTTCGCGAATACT+TGG | 0.403981 | 3.4:+89454563 | MS.gene054635:CDS |
| TCCGGTCCCTTTCATCCATT+CGG | 0.407707 | 3.4:+89454221 | MS.gene054635:CDS |
| TCCGAGGATGGGAAGATTGT+AGG | 0.408097 | 3.4:+89454530 | MS.gene054635:CDS |
| GGAAGCATTGGTAACACAAT+AGG | 0.408443 | 3.4:-89455977 | None:intergenic |
| GATAATATTTCTTATGAGAA+TGG | 0.410235 | 3.4:+89456237 | MS.gene054635:CDS |
| CAAACTAACAATTTGGATAT+AGG | 0.410575 | 3.4:+89455928 | MS.gene054635:CDS |
| TCCTACAGGTCAGATGTTCT+TGG | 0.416257 | 3.4:+89458329 | MS.gene054635:intron |
| TATCTTGCTCATGGGGAAAC+TGG | 0.417204 | 3.4:+89454869 | MS.gene054635:CDS |
| ATTCCTACTGAATCTTAAAC+AGG | 0.423793 | 3.4:+89458843 | MS.gene054635:CDS |
| CTTGCATTCACTCGTATCTC+AGG | 0.425477 | 3.4:+89454916 | MS.gene054635:CDS |
| CGCAACAAGCACTTCTGAGC+AGG | 0.427789 | 3.4:+89460340 | MS.gene054635:CDS |
| ATATTGATCATCAATCTTTG+AGG | 0.435136 | 3.4:+89454486 | MS.gene054635:CDS |
| CCTTCAGGGTACGGAAACTA+AGG | 0.436318 | 3.4:+89455780 | MS.gene054635:intron |
| CTTCTTTATCTATATATTCA+GGG | 0.438364 | 3.4:-89456215 | None:intergenic |
| TCTATGCATGCACTCGTGAA+TGG | 0.445811 | 3.4:+89460308 | MS.gene054635:CDS |
| ATTTCTCATTTGCAGGAGAA+TGG | 0.456087 | 3.4:+89458763 | MS.gene054635:intron |
| CATTTCAGGTCATCTTTGCC+AGG | 0.457046 | 3.4:-89456429 | None:intergenic |
| GATTGCAATCCGTTCTATGC+TGG | 0.458935 | 3.4:+89460068 | MS.gene054635:CDS |
| AGAAGAGGTTTCTGTGGTAG+AGG | 0.460405 | 3.4:+89454778 | MS.gene054635:CDS |
| TCACCATGGTACGTTCGGTT+TGG | 0.460726 | 3.4:+89454296 | MS.gene054635:CDS |
| AATCATCACCATGGTACGTT+CGG | 0.462335 | 3.4:+89454291 | MS.gene054635:CDS |
| CGAATTTGTTGGATATTAAG+TGG | 0.463895 | 3.4:+89454663 | MS.gene054635:CDS |
| CACATAATTCTCGGTCATCC+TGG | 0.465222 | 3.4:-89456011 | None:intergenic |
| TGGATGAAAGGGACCGGAAA+CGG | 0.465333 | 3.4:-89454216 | None:intergenic |
| TCAAATATCAAATGCAGAAG+GGG | 0.466952 | 3.4:-89460654 | None:intergenic |
| CACCAACCAAAGGCATGAAC+TGG | 0.468960 | 3.4:-89458352 | None:intergenic |
| TCAACAAGCAACTCTTCATC+TGG | 0.473273 | 3.4:+89457175 | MS.gene054635:CDS |
| TGAGATTGCCGCGAATTTGT+TGG | 0.477774 | 3.4:+89454652 | MS.gene054635:CDS |
| AGCATAGAACGGATTGCAAT+CGG | 0.479526 | 3.4:-89460066 | None:intergenic |
| GGGGAAGTTGGGCAGCATAC+AGG | 0.479739 | 3.4:+89456321 | MS.gene054635:CDS |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 3.4:+89460113 | MS.gene054635:CDS |
| TCTGTGCAAATCTTATTCTC+TGG | 0.489728 | 3.4:-89457301 | None:intergenic |
| CTTAAGGTTGGAATCCCGTT+GGG | 0.490494 | 3.4:+89460125 | MS.gene054635:CDS |
| GATGCTATCTGTTCGGAAGT+TGG | 0.491272 | 3.4:-89457382 | None:intergenic |
| TGTGGTAGAGGGTGTTGAAG+AGG | 0.492596 | 3.4:+89454790 | MS.gene054635:CDS |
| AAATCTTCATTATAAATCCC+AGG | 0.498505 | 3.4:+89460150 | MS.gene054635:CDS |
| CCCTACAATCTTCCCATCCT+CGG | 0.499678 | 3.4:-89454531 | None:intergenic |
| GAGAATGAGGATGGTTCTAT+TGG | 0.500784 | 3.4:+89454722 | MS.gene054635:CDS |
| TGGTTCTATTGGTGTTGTAA+AGG | 0.501741 | 3.4:+89454733 | MS.gene054635:CDS |
| GGCCAGTTCATGCCTTTGGT+TGG | 0.502823 | 3.4:+89458350 | MS.gene054635:CDS |
| GCAGCAATTGAGTGTAGAAG+AGG | 0.505454 | 3.4:+89454763 | MS.gene054635:CDS |
| TTGGTCTTATGTTTGGGAGA+AGG | 0.506799 | 3.4:+89454582 | MS.gene054635:CDS |
| CTTGACTGCGGAGAATAAAT+GGG | 0.506888 | 3.4:-89458399 | None:intergenic |
| TTCAAATATCAAATGCAGAA+GGG | 0.508191 | 3.4:-89460655 | None:intergenic |
| GTTCGGTTTGGTAAATTCCA+AGG | 0.508413 | 3.4:+89454308 | MS.gene054635:CDS |
| TCAACTCCACCACACTCTCT+TGG | 0.509203 | 3.4:+89456072 | MS.gene054635:CDS |
| GAGGTTATGTATCTTGCTCA+TGG | 0.509583 | 3.4:+89454860 | MS.gene054635:CDS |
| TTTAAGTCAATCACTGGACT+CGG | 0.512647 | 3.4:+89456401 | MS.gene054635:CDS |
| CCGAGGATGGGAAGATTGTA+GGG | 0.513816 | 3.4:+89454531 | MS.gene054635:CDS |
| GGCGCCACCGAATGGATGAA+AGG | 0.515421 | 3.4:-89454228 | None:intergenic |
| CCTGATCTGCTCAAGGAGAA+AGG | 0.515753 | 3.4:-89457217 | None:intergenic |
| GAAATAACAACAGGACCCTC+TGG | 0.516526 | 3.4:-89458988 | None:intergenic |
| TGGTGATCATGCTGTGGTAG+TGG | 0.519796 | 3.4:+89454700 | MS.gene054635:CDS |
| GTGAATTTGAAGATGGTGTT+GGG | 0.520050 | 3.4:+89454615 | MS.gene054635:CDS |
| CACTAAGAATGCTGATGTAG+TGG | 0.520432 | 3.4:+89455807 | MS.gene054635:CDS |
| GTGGTAGAGGGTGTTGAAGA+GGG | 0.522900 | 3.4:+89454791 | MS.gene054635:CDS |
| GAAGAGGTTTCTGTGGTAGA+GGG | 0.525056 | 3.4:+89454779 | MS.gene054635:CDS |
| TCTTCCACATTGTACATACT+AGG | 0.528135 | 3.4:-89455874 | None:intergenic |
| AAAGCAGTTACTGCATGAGC+AGG | 0.529161 | 3.4:+89456476 | MS.gene054635:CDS |
| GCGCCACCGAATGGATGAAA+GGG | 0.531603 | 3.4:-89454227 | None:intergenic |
| ATTCTCTTCGTCTGAACTCG+AGG | 0.531939 | 3.4:-89456133 | None:intergenic |
| CTTAATATCCAACAAATTCG+CGG | 0.532615 | 3.4:-89454660 | None:intergenic |
| CCTAGAAATGAGGATGCTGC+GGG | 0.534545 | 3.4:+89456300 | MS.gene054635:CDS |
| ATTCAACGATGCTATCTGTT+CGG | 0.535090 | 3.4:-89457389 | None:intergenic |
| GGTGTTGACTGGTCACAGAC+TGG | 0.535668 | 3.4:+89458371 | MS.gene054635:CDS |
| CCTTAAGGTTGGAATCCCGT+TGG | 0.536129 | 3.4:+89460124 | MS.gene054635:CDS |
| AGCTATGCTGGGGAAACAGC+AGG | 0.537208 | 3.4:+89457453 | MS.gene054635:CDS |
| CCCTAGAAATGAGGATGCTG+CGG | 0.537736 | 3.4:+89456299 | MS.gene054635:CDS |
| ATATCGACGGCGCCACCGAA+TGG | 0.539480 | 3.4:-89454236 | None:intergenic |
| AGGTTATGTATCTTGCTCAT+GGG | 0.540031 | 3.4:+89454861 | MS.gene054635:CDS |
| CCGCAGCATCCTCATTTCTA+GGG | 0.541811 | 3.4:-89456299 | None:intergenic |
| GAATGATCGTATCGTGATCT+CGG | 0.542030 | 3.4:+89457630 | MS.gene054635:CDS |
| TTCTTTATCTATATATTCAG+GGG | 0.545200 | 3.4:-89456214 | None:intergenic |
| TGCTTCCAGTTACAACAGCC+AGG | 0.546268 | 3.4:+89455993 | MS.gene054635:CDS |
| ACCAGAAGAAATATTTGGCA+AGG | 0.547394 | 3.4:-89456346 | None:intergenic |
| GGTGAATTTGAAGATGGTGT+TGG | 0.551028 | 3.4:+89454614 | MS.gene054635:CDS |
| CATAGTTATCCCTAGAAATG+AGG | 0.553207 | 3.4:+89456290 | MS.gene054635:CDS |
| TTTCAAATATCAAATGCAGA+AGG | 0.555472 | 3.4:-89460656 | None:intergenic |
| TTGGCATCATTTGGAATAGG+TGG | 0.556234 | 3.4:-89457256 | None:intergenic |
| ACCGAATGGATGAAAGGGAC+CGG | 0.561783 | 3.4:-89454222 | None:intergenic |
| ATCGTGATCTCGGATGTGGA+TGG | 0.562787 | 3.4:+89457640 | MS.gene054635:CDS |
| CCATTTATTCTCCGCAGTCA+AGG | 0.563293 | 3.4:+89458400 | MS.gene054635:CDS |
| GATCTCCTTGATGTTTCACT+AGG | 0.569676 | 3.4:-89456105 | None:intergenic |
| TTGCCTTCACGGTATAGAGA+GGG | 0.572218 | 3.4:-89459027 | None:intergenic |
| TCTTCGTCTGAACTCGAGGA+CGG | 0.573184 | 3.4:-89456129 | None:intergenic |
| GTTTACCTAGTGAAACATCA+AGG | 0.578560 | 3.4:+89456100 | MS.gene054635:CDS |
| GAGTGTAGAAGAGGTTTCTG+TGG | 0.580182 | 3.4:+89454772 | MS.gene054635:CDS |
| TTAGAGAGGATGCAAGCGGT+GGG | 0.583078 | 3.4:+89454158 | None:intergenic |
| TTTCCAAAACCAGCATAGAA+CGG | 0.585939 | 3.4:-89460077 | None:intergenic |
| ACAAGCAACTCTTCATCTGG+TGG | 0.588423 | 3.4:+89457178 | MS.gene054635:CDS |
| GGTCCCTTTCATCCATTCGG+TGG | 0.589130 | 3.4:+89454224 | MS.gene054635:CDS |
| GTGAGTGGTGAATTTGAAGA+TGG | 0.589262 | 3.4:+89454608 | MS.gene054635:CDS |
| TCGTATCGTGATCTCGGATG+TGG | 0.593644 | 3.4:+89457636 | MS.gene054635:CDS |
| ATTAGAGAGGATGCAAGCGG+TGG | 0.595958 | 3.4:+89454157 | None:intergenic |
| TCACCTGTTTAAGATTCAGT+AGG | 0.597998 | 3.4:-89458846 | None:intergenic |
| TTTCCCTCTCTATACCGTGA+AGG | 0.598398 | 3.4:+89459024 | MS.gene054635:CDS |
| CAAATGTATCTTGATAACAA+AGG | 0.598518 | 3.4:+89454392 | MS.gene054635:CDS |
| CGTTGAATCTGAAGCAAGGG+AGG | 0.599581 | 3.4:+89457404 | MS.gene054635:CDS |
| GCTGTTGTAACTGGAAGCAT+TGG | 0.599948 | 3.4:-89455989 | None:intergenic |
| TGCTCATGGGGAAACTGGTG+AGG | 0.600662 | 3.4:+89454874 | MS.gene054635:CDS |
| TCTAGATCCTGATCTGCTCA+AGG | 0.603927 | 3.4:-89457224 | None:intergenic |
| TTACCAAACCGAACGTACCA+TGG | 0.604008 | 3.4:-89454299 | None:intergenic |
| TCATTTCTAGGGATAACTAT+GGG | 0.607928 | 3.4:-89456288 | None:intergenic |
| TGCTGTGGTAGTGGAGAATG+AGG | 0.610182 | 3.4:+89454709 | MS.gene054635:CDS |
| CATCGTTGAATCTGAAGCAA+GGG | 0.610649 | 3.4:+89457401 | MS.gene054635:CDS |
| AATCTTCATTATAAATCCCA+GGG | 0.611431 | 3.4:+89460151 | MS.gene054635:CDS |
| ATTGCCTTCACGGTATAGAG+AGG | 0.614030 | 3.4:-89459028 | None:intergenic |
| ATACGAGTGAATGCAAGACT+TGG | 0.615146 | 3.4:-89454910 | None:intergenic |
| AAGTGGTCTACGAATCAAGA+TGG | 0.615279 | 3.4:+89454680 | MS.gene054635:CDS |
| CAGAATGAATGATCGATACG+AGG | 0.617552 | 3.4:+89456182 | MS.gene054635:CDS |
| GCATCGTTGAATCTGAAGCA+AGG | 0.617570 | 3.4:+89457400 | MS.gene054635:CDS |
| TAGAAATGAGGATGCTGCGG+GGG | 0.620903 | 3.4:+89456302 | MS.gene054635:CDS |
| CTGCTCAGAAGTGCTTGTTG+CGG | 0.621225 | 3.4:-89460339 | None:intergenic |
| TAAGAATGCTGATGTAGTGG+AGG | 0.623360 | 3.4:+89455810 | MS.gene054635:CDS |
| CAGTTACTGCATGAGCAGGA+AGG | 0.623575 | 3.4:+89456480 | MS.gene054635:CDS |
| GTGAATGCAAGACTTGGTCA+TGG | 0.624514 | 3.4:-89454904 | None:intergenic |
| GCTCAGAAGTGCTTGTTGCG+GGG | 0.625841 | 3.4:-89460337 | None:intergenic |
| GGTTATGTATCTTGCTCATG+GGG | 0.626196 | 3.4:+89454862 | MS.gene054635:CDS |
| TTAAAGGAAAACGAACGTGT+TGG | 0.629150 | 3.4:-89456383 | None:intergenic |
| ATATCATCAACAGATTCTAA+CGG | 0.633327 | 3.4:-89454467 | None:intergenic |
| GTACAATGTGGAAGATGTTG+AGG | 0.633807 | 3.4:+89455882 | MS.gene054635:CDS |
| TTAGGGAGCTACATTAGTCA+AGG | 0.635109 | 3.4:+89454185 | MS.gene054635:CDS |
| TTGATGCTCAAATATATCTG+TGG | 0.635548 | 3.4:+89457602 | MS.gene054635:CDS |
| AAACAATCACCAAGAGAGTG+TGG | 0.649865 | 3.4:-89456081 | None:intergenic |
| TAGAACGGATTGCAATCGGA+AGG | 0.650304 | 3.4:-89460062 | None:intergenic |
| AGAATGAATGATCGATACGA+GGG | 0.652534 | 3.4:+89456183 | MS.gene054635:CDS |
| CAAATATCAAATGCAGAAGG+GGG | 0.653360 | 3.4:-89460653 | None:intergenic |
| CTCAAGTGAGCAAACTCATG+AGG | 0.654134 | 3.4:+89454841 | MS.gene054635:CDS |
| CTTCAGGGTACGGAAACTAA+GGG | 0.659954 | 3.4:+89455781 | MS.gene054635:intron |
| GTGGTAGTGGAGAATGAGGA+TGG | 0.670297 | 3.4:+89454713 | MS.gene054635:CDS |
| GACCAGTCAACACCAACCAA+AGG | 0.670738 | 3.4:-89458362 | None:intergenic |
| TTGAACGACGACGATATCGA+CGG | 0.672004 | 3.4:-89454249 | None:intergenic |
| TGAGCCTAGTATGTACAATG+TGG | 0.685162 | 3.4:+89455870 | MS.gene054635:CDS |
| GTTCATTCAAATCATCACCA+TGG | 0.692552 | 3.4:+89454282 | MS.gene054635:CDS |
| CAATCACCAAGAGAGTGTGG+TGG | 0.694828 | 3.4:-89456078 | None:intergenic |
| TTAATTAGAGAGGATGCAAG+CGG | 0.696839 | 3.4:+89454154 | None:intergenic |
| TTTGGGAGAAGGTCTGTGAG+TGG | 0.698399 | 3.4:+89454593 | MS.gene054635:CDS |
| CTAGAAATGAGGATGCTGCG+GGG | 0.704073 | 3.4:+89456301 | MS.gene054635:CDS |
| AGGATGGGAAGATTGTAGGG+AGG | 0.707626 | 3.4:+89454534 | MS.gene054635:CDS |
| TACCAGCTCTCTTACCAGGG+GGG | 0.707953 | 3.4:-89456554 | None:intergenic |
| TAGAGAGGATGCAAGCGGTG+GGG | 0.712708 | 3.4:+89454159 | None:intergenic |
| ATTATGTGATAATAACACGA+AGG | 0.713676 | 3.4:+89456026 | MS.gene054635:CDS |
| TCAAGATGGTGATCATGCTG+TGG | 0.730772 | 3.4:+89454694 | MS.gene054635:CDS |
| ACATAAGCAAACCTTGACTG+CGG | 0.730908 | 3.4:-89458411 | None:intergenic |
| GTCGTCGTTCAACAACAAGA+CGG | 0.732356 | 3.4:+89454260 | MS.gene054635:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAAAAAAAAAAA+AGG | - | chr3.4:89460186-89460205 | None:intergenic | 0.0% |
| !! | TAAAACATAAGAAATAATAT+TGG | - | chr3.4:89457562-89457581 | None:intergenic | 10.0% |
| !! | TAACTTTATAATATTAATCT+TGG | + | chr3.4:89459273-89459292 | MS.gene054635:intron | 10.0% |
| !! | ATTATAGAAACATACATAAA+AGG | - | chr3.4:89457526-89457545 | None:intergenic | 15.0% |
| !! | TCAAATTTGATCAAATATTA+TGG | + | chr3.4:89458175-89458194 | MS.gene054635:intron | 15.0% |
| !! | TTATAGAAACATACATAAAA+GGG | - | chr3.4:89457525-89457544 | None:intergenic | 15.0% |
| !!! | ACTTATTTGAGATTATTTAA+TGG | + | chr3.4:89454971-89454990 | MS.gene054635:intron | 15.0% |
| !!! | ATTTTATGTATACATATATC+TGG | - | chr3.4:89459587-89459606 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCATTCATAACT+GGG | + | chr3.4:89460379-89460398 | MS.gene054635:intron | 15.0% |
| !!! | TTATTTTTTTCATTCATAAC+TGG | + | chr3.4:89460378-89460397 | MS.gene054635:intron | 15.0% |
| !!! | TTTGAATATTAAATAATGGA+AGG | - | chr3.4:89460407-89460426 | None:intergenic | 15.0% |
| !! | AAAATCTCAAACTAACAATT+TGG | + | chr3.4:89455921-89455940 | MS.gene054635:CDS | 20.0% |
| !! | AAATATTGAAGTTAACTTAG+GGG | - | chr3.4:89459658-89459677 | None:intergenic | 20.0% |
| !! | ACAAATATTAGATTAAGACA+TGG | + | chr3.4:89457063-89457082 | MS.gene054635:intron | 20.0% |
| !! | ACAAATATTGAAGTTAACTT+AGG | - | chr3.4:89459660-89459679 | None:intergenic | 20.0% |
| !! | ACTGGTAGATATATAATATA+AGG | + | chr3.4:89459546-89459565 | MS.gene054635:intron | 20.0% |
| !! | ATAAAAAAAAAAATCTACCC+CGG | - | chr3.4:89460459-89460478 | None:intergenic | 20.0% |
| !! | CAAATATTGAAGTTAACTTA+GGG | - | chr3.4:89459659-89459678 | None:intergenic | 20.0% |
| !! | CTTCTTTATCTATATATTCA+GGG | - | chr3.4:89456218-89456237 | None:intergenic | 20.0% |
| !! | GAAAATATGAAGAAGAAAAA+AGG | - | chr3.4:89459308-89459327 | None:intergenic | 20.0% |
| !! | GATAACAAATTCATTTCTTT+AGG | + | chr3.4:89456964-89456983 | MS.gene054635:intron | 20.0% |
| !! | GATAATATTTCTTATGAGAA+TGG | + | chr3.4:89456237-89456256 | MS.gene054635:CDS | 20.0% |
| !! | TATTACCATAAATACTACTA+CGG | - | chr3.4:89458228-89458247 | None:intergenic | 20.0% |
| !! | TCTTCTTTATCTATATATTC+AGG | - | chr3.4:89456219-89456238 | None:intergenic | 20.0% |
| !! | TGTTATTATCACATAATTCT+CGG | - | chr3.4:89456023-89456042 | None:intergenic | 20.0% |
| !! | TTATGAAAATAAGCTGAAAA+GGG | - | chr3.4:89455042-89455061 | None:intergenic | 20.0% |
| !! | TTATTACCAGAAGAAATATT+TGG | - | chr3.4:89456354-89456373 | None:intergenic | 20.0% |
| !! | TTCTTTATCTATATATTCAG+GGG | - | chr3.4:89456217-89456236 | None:intergenic | 20.0% |
| !! | TTGATATATTGCCTTAATTA+CGG | + | chr3.4:89459396-89459415 | MS.gene054635:intron | 20.0% |
| !! | TTTCTTTCTCATTGTTAATT+TGG | + | chr3.4:89457763-89457782 | MS.gene054635:intron | 20.0% |
| !!! | AAATTGTTAGTTTGAGATTT+TGG | - | chr3.4:89455922-89455941 | None:intergenic | 20.0% |
| !!! | AATATATCTTTTTACATTGC+AGG | + | chr3.4:89458951-89458970 | MS.gene054635:intron | 20.0% |
| !!! | AGCTATATTTTATTTCATAG+AGG | - | chr3.4:89457897-89457916 | None:intergenic | 20.0% |
| !!! | ATTTGACTTAAAAGGTATAT+TGG | - | chr3.4:89458161-89458180 | None:intergenic | 20.0% |
| !!! | ATTTTAATTCATGGAATTTC+TGG | + | chr3.4:89460624-89460643 | MS.gene054635:CDS | 20.0% |
| !!! | CAATTAAAAATTTTCAACTG+AGG | - | chr3.4:89458729-89458748 | None:intergenic | 20.0% |
| !!! | CTTATTTTCATAAGTTCTTT+AGG | + | chr3.4:89455049-89455068 | MS.gene054635:intron | 20.0% |
| !!! | TGAAATTTTTCATGAGATTT+AGG | + | chr3.4:89457012-89457031 | MS.gene054635:intron | 20.0% |
| !!! | TTGATCAAATTTGACTTAAA+AGG | - | chr3.4:89458169-89458188 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATGTTTTAGCA+TGG | + | chr3.4:89458648-89458667 | MS.gene054635:intron | 20.0% |
| ! | AAAAAAGGATTTATTTACCC+TGG | - | chr3.4:89460171-89460190 | None:intergenic | 25.0% |
| ! | AAAAAGGATTTATTTACCCT+GGG | - | chr3.4:89460170-89460189 | None:intergenic | 25.0% |
| ! | AAATCTTCATTATAAATCCC+AGG | + | chr3.4:89460150-89460169 | MS.gene054635:CDS | 25.0% |
| ! | AATAAGATTTATTGCCTTCA+CGG | - | chr3.4:89459041-89459060 | None:intergenic | 25.0% |
| ! | AATATTAGATTAAGACATGG+TGG | + | chr3.4:89457066-89457085 | MS.gene054635:intron | 25.0% |
| ! | AATCTTCATTATAAATCCCA+GGG | + | chr3.4:89460151-89460170 | MS.gene054635:CDS | 25.0% |
| ! | ACTGAATTAGTAACAATCTA+TGG | + | chr3.4:89456614-89456633 | MS.gene054635:intron | 25.0% |
| ! | ACTGTATATACTGTATTCTA+TGG | + | chr3.4:89456647-89456666 | MS.gene054635:intron | 25.0% |
| ! | ATATCATCAACAGATTCTAA+CGG | - | chr3.4:89454470-89454489 | None:intergenic | 25.0% |
| ! | ATATTGATCATCAATCTTTG+AGG | + | chr3.4:89454486-89454505 | MS.gene054635:CDS | 25.0% |
| ! | ATGATAAGAATTTAAAAGCC+AGG | - | chr3.4:89458614-89458633 | None:intergenic | 25.0% |
| ! | ATTATGTGATAATAACACGA+AGG | + | chr3.4:89456026-89456045 | MS.gene054635:CDS | 25.0% |
| ! | ATTCAAAATAAATAGCATGC+TGG | + | chr3.4:89460420-89460439 | MS.gene054635:intron | 25.0% |
| ! | ATTTAGTGAAAAAGAAGGTT+AGG | + | chr3.4:89457350-89457369 | MS.gene054635:CDS | 25.0% |
| ! | CAAACTAACAATTTGGATAT+AGG | + | chr3.4:89455928-89455947 | MS.gene054635:CDS | 25.0% |
| ! | CAATATTTGTTTAAGCTTCA+AGG | + | chr3.4:89459670-89459689 | MS.gene054635:intron | 25.0% |
| ! | CATTTAAGTGCTTATGTATA+AGG | - | chr3.4:89455147-89455166 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | - | chr3.4:89455043-89455062 | None:intergenic | 25.0% |
| ! | GCTTATAGCATGTATTAAAA+TGG | + | chr3.4:89455088-89455107 | MS.gene054635:intron | 25.0% |
| ! | TAGAGTAAAATTAAGCATCT+GGG | + | chr3.4:89459431-89459450 | MS.gene054635:intron | 25.0% |
| ! | TCTCATAACATGTAAATACA+TGG | - | chr3.4:89458440-89458459 | None:intergenic | 25.0% |
| ! | TGATATATTGCCTTAATTAC+GGG | + | chr3.4:89459397-89459416 | MS.gene054635:intron | 25.0% |
| ! | TGATTATAACAGACTAAACA+AGG | - | chr3.4:89458096-89458115 | None:intergenic | 25.0% |
| ! | TGTAAGTTTCACTAAAGATT+TGG | + | chr3.4:89456704-89456723 | MS.gene054635:intron | 25.0% |
| ! | TTAGAGTAAAATTAAGCATC+TGG | + | chr3.4:89459430-89459449 | MS.gene054635:intron | 25.0% |
| ! | TTGCAATTTATTTGCATTCA+GGG | - | chr3.4:89455379-89455398 | None:intergenic | 25.0% |
| ! | TTTAGTGAAAAAGAAGGTTA+GGG | + | chr3.4:89457351-89457370 | MS.gene054635:CDS | 25.0% |
| ! | TTTGCAATTTATTTGCATTC+AGG | - | chr3.4:89455380-89455399 | None:intergenic | 25.0% |
| !! | ACTTTTCTTACATGATTCAT+TGG | + | chr3.4:89459185-89459204 | MS.gene054635:intron | 25.0% |
| !! | ATAATGAAGATTTTTCCCAA+CGG | - | chr3.4:89460143-89460162 | None:intergenic | 25.0% |
| !! | CAAATGTATCTTGATAACAA+AGG | + | chr3.4:89454392-89454411 | MS.gene054635:CDS | 25.0% |
| !! | CATATTTTCAGTCATTAGAA+GGG | + | chr3.4:89459319-89459338 | MS.gene054635:intron | 25.0% |
| !! | CTTAAAAGGTATATTGGTTA+TGG | - | chr3.4:89458155-89458174 | None:intergenic | 25.0% |
| !! | CTTGAAATTTTACATCCAAT+TGG | - | chr3.4:89458062-89458081 | None:intergenic | 25.0% |
| !! | TATTAGACACTACTATTTTG+AGG | + | chr3.4:89459102-89459121 | MS.gene054635:intron | 25.0% |
| !! | TCATATTTTCAGTCATTAGA+AGG | + | chr3.4:89459318-89459337 | MS.gene054635:intron | 25.0% |
| !!! | AAAACCACAAATTTTTTACC+TGG | + | chr3.4:89458593-89458612 | MS.gene054635:intron | 25.0% |
| !!! | AACCTTCTTTTTCACTAAAT+TGG | - | chr3.4:89457350-89457369 | None:intergenic | 25.0% |
| !!! | ACCTTCTTTTTCACTAAATT+GGG | - | chr3.4:89457349-89457368 | None:intergenic | 25.0% |
| !!! | ATTGCACTATTGATAGTTTT+TGG | + | chr3.4:89458511-89458530 | MS.gene054635:intron | 25.0% |
| !!! | CGTTTCACTTTTAATTTGTT+TGG | - | chr3.4:89459818-89459837 | None:intergenic | 25.0% |
| !!! | GATTTGAACGATTTTTTCTT+TGG | - | chr3.4:89454345-89454364 | None:intergenic | 25.0% |
| !!! | TAAAACTTTAAGACCTTGTT+TGG | - | chr3.4:89455211-89455230 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTTCAAAACCT+TGG | + | chr3.4:89455641-89455660 | MS.gene054635:intron | 25.0% |
| !!! | TTGCACTATTGATAGTTTTT+GGG | + | chr3.4:89458512-89458531 | MS.gene054635:intron | 25.0% |
| !!! | TTTTAAAAAGTCTCTAACTC+TGG | + | chr3.4:89458273-89458292 | MS.gene054635:intron | 25.0% |
| AAACAAAGGAGACATTACAA+TGG | - | chr3.4:89456587-89456606 | None:intergenic | 30.0% | |
| AAAGCCAGGTAAAAAATTTG+TGG | - | chr3.4:89458600-89458619 | None:intergenic | 30.0% | |
| AAAGTGAGAATCTATCTTTC+TGG | + | chr3.4:89457672-89457691 | MS.gene054635:intron | 30.0% | |
| AAATAATCACATGCACTAGA+TGG | - | chr3.4:89459718-89459737 | None:intergenic | 30.0% | |
| AAATTCATTTCTTTAGGCCT+GGG | + | chr3.4:89456970-89456989 | MS.gene054635:intron | 30.0% | |
| AACCATCAATAGTGCAATAA+TGG | - | chr3.4:89458561-89458580 | None:intergenic | 30.0% | |
| AATCATGATTATCGTGAAGT+TGG | + | chr3.4:89458111-89458130 | MS.gene054635:intron | 30.0% | |
| ACCATCAATAGTGCAATAAT+GGG | - | chr3.4:89458560-89458579 | None:intergenic | 30.0% | |
| ACCCAATTTAGTGAAAAAGA+AGG | + | chr3.4:89457345-89457364 | MS.gene054635:CDS | 30.0% | |
| AGAGTAAAATTAAGCATCTG+GGG | + | chr3.4:89459432-89459451 | MS.gene054635:intron | 30.0% | |
| ATATGTTGAAATTCTCCTTC+AGG | + | chr3.4:89455765-89455784 | MS.gene054635:intron | 30.0% | |
| ATCAACAAAGCAACTACATA+AGG | - | chr3.4:89456851-89456870 | None:intergenic | 30.0% | |
| ATCATTGTTCAGCAAGATTA+AGG | - | chr3.4:89460595-89460614 | None:intergenic | 30.0% | |
| ATTCAAAATTGCATGCTTAG+AGG | + | chr3.4:89459352-89459371 | MS.gene054635:CDS | 30.0% | |
| ATTCAGAGTTTATATCACAC+AGG | - | chr3.4:89460497-89460516 | None:intergenic | 30.0% | |
| ATTCAGTTGACAGAAAACAA+AGG | - | chr3.4:89456601-89456620 | None:intergenic | 30.0% | |
| ATTCCTACTGAATCTTAAAC+AGG | + | chr3.4:89458843-89458862 | MS.gene054635:CDS | 30.0% | |
| CAAAATCGAACTTATGTAAC+TGG | + | chr3.4:89459528-89459547 | MS.gene054635:intron | 30.0% | |
| CGTAAAACAATCACTATAGA+CGG | - | chr3.4:89458695-89458714 | None:intergenic | 30.0% | |
| CTCAAATATATCTGTGGAAA+TGG | + | chr3.4:89457608-89457627 | MS.gene054635:CDS | 30.0% | |
| CTGAAAATTGTTCAAACTTC+TGG | - | chr3.4:89459980-89459999 | None:intergenic | 30.0% | |
| CTTAATATCCAACAAATTCG+CGG | - | chr3.4:89454663-89454682 | None:intergenic | 30.0% | |
| GAATTTCAACATATGAGTGT+TGG | - | chr3.4:89455759-89455778 | None:intergenic | 30.0% | |
| GATAAATATATGTAGAGCAC+TGG | + | chr3.4:89459128-89459147 | MS.gene054635:intron | 30.0% | |
| GTAAAACAATCACTATAGAC+GGG | - | chr3.4:89458694-89458713 | None:intergenic | 30.0% | |
| GTGAGATATGATATTCATCA+TGG | + | chr3.4:89459227-89459246 | MS.gene054635:intron | 30.0% | |
| TAAAACAATCACTATAGACG+GGG | - | chr3.4:89458693-89458712 | None:intergenic | 30.0% | |
| TAAGGCAATATATCAACAAG+TGG | - | chr3.4:89459392-89459411 | None:intergenic | 30.0% | |
| TAGGAATTGTCGTGTAATAT+AGG | - | chr3.4:89458830-89458849 | None:intergenic | 30.0% | |
| TATAGTCTATGACTGCATTT+AGG | - | chr3.4:89455298-89455317 | None:intergenic | 30.0% | |
| TATGTTGAAATTCTCCTTCA+GGG | + | chr3.4:89455766-89455785 | MS.gene054635:intron | 30.0% | |
| TCAAATATCAAATGCAGAAG+GGG | - | chr3.4:89460657-89460676 | None:intergenic | 30.0% | |
| TCACTGATCCATCAATTAAA+TGG | - | chr3.4:89459211-89459230 | None:intergenic | 30.0% | |
| TCCTTGAATATAAGTTTGTC+AGG | + | chr3.4:89460216-89460235 | MS.gene054635:intron | 30.0% | |
| TGATGAAATCAGTTACCTTA+AGG | + | chr3.4:89460109-89460128 | MS.gene054635:CDS | 30.0% | |
| TGTCAAAGATAGTTGTTTGA+TGG | - | chr3.4:89455239-89455258 | None:intergenic | 30.0% | |
| TTAATAGTGCGTAACAGTTT+AGG | + | chr3.4:89458012-89458031 | MS.gene054635:intron | 30.0% | |
| TTCAGAATCTTGATAAGCTT+TGG | - | chr3.4:89456508-89456527 | None:intergenic | 30.0% | |
| TTCATTGGCCATTTAATTGA+TGG | + | chr3.4:89459200-89459219 | MS.gene054635:intron | 30.0% | |
| TTGATGCTCAAATATATCTG+TGG | + | chr3.4:89457602-89457621 | MS.gene054635:CDS | 30.0% | |
| TTTCATGAGATTTAGGAACT+AGG | + | chr3.4:89457019-89457038 | MS.gene054635:intron | 30.0% | |
| ! | AAAACAGATTAGAGTTTTGC+TGG | - | chr3.4:89455728-89455747 | None:intergenic | 30.0% |
| ! | AACAACAGATGTATTGACAA+AGG | - | chr3.4:89458251-89458270 | None:intergenic | 30.0% |
| ! | AACAATTTTCAGCATGATCA+TGG | + | chr3.4:89459988-89460007 | MS.gene054635:intron | 30.0% |
| ! | AGCAAAACTCTAATCTGTTT+TGG | + | chr3.4:89455727-89455746 | MS.gene054635:intron | 30.0% |
| ! | ATGATTTTGTGTCAAGACTT+CGG | - | chr3.4:89460283-89460302 | None:intergenic | 30.0% |
| ! | ATTGCCAAAAAGATCACTTT+TGG | - | chr3.4:89457278-89457297 | None:intergenic | 30.0% |
| ! | CAAATATCTTCAGGTATTGT+CGG | - | chr3.4:89457791-89457810 | None:intergenic | 30.0% |
| ! | CATGCAATTTTGAATTCATG+AGG | - | chr3.4:89459347-89459366 | None:intergenic | 30.0% |
| ! | GAAATTTTACATCCAATTGG+TGG | - | chr3.4:89458059-89458078 | None:intergenic | 30.0% |
| ! | TAATGAAGATTTTTCCCAAC+GGG | - | chr3.4:89460142-89460161 | None:intergenic | 30.0% |
| ! | TATCTTTTTACATTGCAGGA+TGG | + | chr3.4:89458955-89458974 | MS.gene054635:intron | 30.0% |
| ! | TCATTTCTAGGGATAACTAT+GGG | - | chr3.4:89456291-89456310 | None:intergenic | 30.0% |
| ! | TGTAAAATTTCAAGTAGACG+AGG | + | chr3.4:89458068-89458087 | MS.gene054635:intron | 30.0% |
| ! | TTTTCCTTTAAGTCAATCAC+TGG | + | chr3.4:89456395-89456414 | MS.gene054635:CDS | 30.0% |
| !! | CGAATTTGTTGGATATTAAG+TGG | + | chr3.4:89454663-89454682 | MS.gene054635:CDS | 30.0% |
| !! | GAATACTTGGTCTTATGTTT+GGG | + | chr3.4:89454576-89454595 | MS.gene054635:CDS | 30.0% |
| !! | TAAGTTGTTTTGTCCAAACA+AGG | + | chr3.4:89455195-89455214 | MS.gene054635:intron | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+AGG | - | chr3.4:89454961-89454980 | None:intergenic | 30.0% |
| !! | TGCTATAAGCTGTTTTCATA+AGG | - | chr3.4:89455078-89455097 | None:intergenic | 30.0% |
| !! | TTACGTTTGATTTGATCAAC+AGG | + | chr3.4:89457579-89457598 | MS.gene054635:intron | 30.0% |
| !!! | AGTATTTTGGTAGAGCAAAA+TGG | + | chr3.4:89456776-89456795 | MS.gene054635:intron | 30.0% |
| !!! | ATTTGTGGTTTTAACAGACA+CGG | - | chr3.4:89458585-89458604 | None:intergenic | 30.0% |
| !!! | CATGATTTTGTTTTCCAACT+TGG | - | chr3.4:89457144-89457163 | None:intergenic | 30.0% |
| !!! | CTTTGGATTTTAAAACACCT+TGG | - | chr3.4:89454328-89454347 | None:intergenic | 30.0% |
| !!! | TTGATAGTTTTTGGGTAATG+TGG | + | chr3.4:89458520-89458539 | MS.gene054635:intron | 30.0% |
| !!! | TTTTTTCAAAACCTTGGTCA+TGG | + | chr3.4:89455647-89455666 | MS.gene054635:intron | 30.0% |
| !!! | TTTTTTGTTTCATGTCCTAC+AGG | + | chr3.4:89458315-89458334 | MS.gene054635:intron | 30.0% |
| AACTTGATCTGACAATATGC+TGG | + | chr3.4:89457714-89457733 | MS.gene054635:intron | 35.0% | |
| AATGTATGATCAGTGCATTC+AGG | - | chr3.4:89458491-89458510 | None:intergenic | 35.0% | |
| AATTCATTTCTTTAGGCCTG+GGG | + | chr3.4:89456971-89456990 | MS.gene054635:intron | 35.0% | |
| ACCAACAAAGTCTACATTCA+GGG | + | chr3.4:89455512-89455531 | MS.gene054635:intron | 35.0% | |
| ACCAGAAGAAATATTTGGCA+AGG | - | chr3.4:89456349-89456368 | None:intergenic | 35.0% | |
| ACGCAAGTGAATGAAAAGAA+AGG | - | chr3.4:89457969-89457988 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr3.4:89455408-89455427 | None:intergenic | 35.0% | |
| AGAATGAATGATCGATACGA+GGG | + | chr3.4:89456183-89456202 | MS.gene054635:CDS | 35.0% | |
| AGACTTTGTTGGTCAATTTC+AGG | - | chr3.4:89455505-89455524 | None:intergenic | 35.0% | |
| AGGTTATGTATCTTGCTCAT+GGG | + | chr3.4:89454861-89454880 | MS.gene054635:CDS | 35.0% | |
| AGTCATAGACTATAGAGAGA+CGG | + | chr3.4:89455304-89455323 | MS.gene054635:intron | 35.0% | |
| AGTGCAAGTTTGATACAATG+AGG | + | chr3.4:89460541-89460560 | MS.gene054635:intron | 35.0% | |
| ATATATCAACAAGTGGAAGC+TGG | - | chr3.4:89459385-89459404 | None:intergenic | 35.0% | |
| ATGAGCCGTAGTAGTATTTA+TGG | + | chr3.4:89458220-89458239 | MS.gene054635:intron | 35.0% | |
| ATGATAAGTGCTTGTGTTGT+TGG | + | chr3.4:89455164-89455183 | MS.gene054635:intron | 35.0% | |
| ATTCAACGATGCTATCTGTT+CGG | - | chr3.4:89457392-89457411 | None:intergenic | 35.0% | |
| ATTCAGCAATGAAATTGCAG+AGG | - | chr3.4:89457835-89457854 | None:intergenic | 35.0% | |
| ATTTCTCATTTGCAGGAGAA+TGG | + | chr3.4:89458763-89458782 | MS.gene054635:intron | 35.0% | |
| CAAAATTATGTAGGCTCTGT+AGG | - | chr3.4:89459845-89459864 | None:intergenic | 35.0% | |
| CAAATATCAAATGCAGAAGG+GGG | - | chr3.4:89460656-89460675 | None:intergenic | 35.0% | |
| CAAATTCATTTCTTTAGGCC+TGG | + | chr3.4:89456969-89456988 | MS.gene054635:intron | 35.0% | |
| CATAGCTGTAGAAAAAGTGA+AGG | - | chr3.4:89457440-89457459 | None:intergenic | 35.0% | |
| CATAGTTATCCCTAGAAATG+AGG | + | chr3.4:89456290-89456309 | MS.gene054635:CDS | 35.0% | |
| CGACAATACCTGAAGATATT+TGG | + | chr3.4:89457789-89457808 | MS.gene054635:intron | 35.0% | |
| CGTCTAAGTTTAAGCATTTC+AGG | - | chr3.4:89456446-89456465 | None:intergenic | 35.0% | |
| CTCATGTATGTAGCATTACT+TGG | - | chr3.4:89459619-89459638 | None:intergenic | 35.0% | |
| CTCATTTACACCCGTAATTA+AGG | - | chr3.4:89459410-89459429 | None:intergenic | 35.0% | |
| GAAAAAGAGACTTGATACTC+TGG | - | chr3.4:89460043-89460062 | None:intergenic | 35.0% | |
| GAAATCAGTTACCTTAAGGT+TGG | + | chr3.4:89460113-89460132 | MS.gene054635:CDS | 35.0% | |
| GACATTCATTGCAGAAAATC+TGG | + | chr3.4:89456939-89456958 | MS.gene054635:intron | 35.0% | |
| GACGACTCATTTCATATTCA+GGG | - | chr3.4:89455348-89455367 | None:intergenic | 35.0% | |
| GACTTTGTTGGTCAATTTCA+GGG | - | chr3.4:89455504-89455523 | None:intergenic | 35.0% | |
| GATTAAGGACAACAATGTGT+TGG | - | chr3.4:89460580-89460599 | None:intergenic | 35.0% | |
| GCCTGACAAACTTATATTCA+AGG | - | chr3.4:89460220-89460239 | None:intergenic | 35.0% | |
| GTATGTAGCATTACTTGGAA+AGG | - | chr3.4:89459614-89459633 | None:intergenic | 35.0% | |
| GTGAATTTGAAGATGGTGTT+GGG | + | chr3.4:89454615-89454634 | MS.gene054635:CDS | 35.0% | |
| GTTAGACACCAAATATCTTC+AGG | - | chr3.4:89457800-89457819 | None:intergenic | 35.0% | |
| GTTCATTCAAATCATCACCA+TGG | + | chr3.4:89454282-89454301 | MS.gene054635:CDS | 35.0% | |
| GTTGGAAAACAAAATCATGC+AGG | + | chr3.4:89457145-89457164 | MS.gene054635:intron | 35.0% | |
| GTTTACCTAGTGAAACATCA+AGG | + | chr3.4:89456100-89456119 | MS.gene054635:CDS | 35.0% | |
| TCAATTAAACTCCATGACCA+AGG | - | chr3.4:89455661-89455680 | None:intergenic | 35.0% | |
| TCACTCACACATAAACAGAA+AGG | - | chr3.4:89459476-89459495 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr3.4:89455423-89455442 | None:intergenic | 35.0% | |
| TCCCACTTCCAAAATTATGT+AGG | - | chr3.4:89459854-89459873 | None:intergenic | 35.0% | |
| TCCTTGCCAAATATTTCTTC+TGG | + | chr3.4:89456345-89456364 | MS.gene054635:CDS | 35.0% | |
| TCTGCAATTTCATTGCTGAA+TGG | + | chr3.4:89457834-89457853 | MS.gene054635:intron | 35.0% | |
| TCTGTGCAAATCTTATTCTC+TGG | - | chr3.4:89457304-89457323 | None:intergenic | 35.0% | |
| TCTTCCACATTGTACATACT+AGG | - | chr3.4:89455877-89455896 | None:intergenic | 35.0% | |
| TGACGACTCATTTCATATTC+AGG | - | chr3.4:89455349-89455368 | None:intergenic | 35.0% | |
| TGCAAGCTTAACCATAAGAA+AGG | - | chr3.4:89460242-89460261 | None:intergenic | 35.0% | |
| TTAAAGGAAAACGAACGTGT+TGG | - | chr3.4:89456386-89456405 | None:intergenic | 35.0% | |
| TTCTGTTTATGTGTGAGTGA+TGG | + | chr3.4:89459476-89459495 | MS.gene054635:intron | 35.0% | |
| TTCTTATGGTTAAGCTTGCA+GGG | + | chr3.4:89460242-89460261 | MS.gene054635:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr3.4:89455541-89455560 | MS.gene054635:intron | 35.0% | |
| TTTAAGTCAATCACTGGACT+CGG | + | chr3.4:89456401-89456420 | MS.gene054635:CDS | 35.0% | |
| TTTCCAAAACCAGCATAGAA+CGG | - | chr3.4:89460080-89460099 | None:intergenic | 35.0% | |
| TTTCGTCAAGGTCACTAAAA+AGG | - | chr3.4:89456161-89456180 | None:intergenic | 35.0% | |
| TTTCTTATGGTTAAGCTTGC+AGG | + | chr3.4:89460241-89460260 | MS.gene054635:intron | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr3.4:89455540-89455559 | MS.gene054635:intron | 35.0% | |
| TTTGGGTAATGTGGTTAATC+TGG | + | chr3.4:89458529-89458548 | MS.gene054635:intron | 35.0% | |
| ! | CATTCATTCTGTTTTCGTCA+AGG | - | chr3.4:89456173-89456192 | None:intergenic | 35.0% |
| ! | CTACAGAGCCTACATAATTT+TGG | + | chr3.4:89459843-89459862 | MS.gene054635:intron | 35.0% |
| ! | CTCATTTCTAGGGATAACTA+TGG | - | chr3.4:89456292-89456311 | None:intergenic | 35.0% |
| ! | GAGACATGTGTCAAGTATTT+TGG | + | chr3.4:89456763-89456782 | MS.gene054635:intron | 35.0% |
| ! | GATGCCAAAAGTGATCTTTT+TGG | + | chr3.4:89457271-89457290 | MS.gene054635:CDS | 35.0% |
| ! | TAAAATTAAGCATCTGGGGT+CGG | + | chr3.4:89459436-89459455 | MS.gene054635:intron | 35.0% |
| ! | TCACCTGTTTAAGATTCAGT+AGG | - | chr3.4:89458849-89458868 | None:intergenic | 35.0% |
| ! | TCATAGTCTTAAGACCTGTT+TGG | + | chr3.4:89454944-89454963 | MS.gene054635:intron | 35.0% |
| ! | TTTCCAGGAAGCATATTTCA+AGG | - | chr3.4:89456823-89456842 | None:intergenic | 35.0% |
| ! | TTTTGGTAGAGCAAAATGGA+AGG | + | chr3.4:89456780-89456799 | MS.gene054635:intron | 35.0% |
| !! | ACATAACACTTGCTGTATGA+AGG | + | chr3.4:89456893-89456912 | MS.gene054635:intron | 35.0% |
| !! | ACTTTTTCTACAGCTATGCT+GGG | + | chr3.4:89457442-89457461 | MS.gene054635:CDS | 35.0% |
| !! | AGATCACTTTTGGCATCATT+TGG | - | chr3.4:89457268-89457287 | None:intergenic | 35.0% |
| !! | AGCCTACATAATTTTGGAAG+TGG | + | chr3.4:89459849-89459868 | MS.gene054635:intron | 35.0% |
| !! | CATAACACTTGCTGTATGAA+GGG | + | chr3.4:89456894-89456913 | MS.gene054635:intron | 35.0% |
| !! | CGAATACTTGGTCTTATGTT+TGG | + | chr3.4:89454575-89454594 | MS.gene054635:CDS | 35.0% |
| !! | CTACTACATGCTTTAGTTTG+CGG | + | chr3.4:89456741-89456760 | MS.gene054635:intron | 35.0% |
| !! | CTTTTGGCATCATTTGGAAT+AGG | - | chr3.4:89457262-89457281 | None:intergenic | 35.0% |
| !! | GAGATTTTGGAGATGTTGTT+AGG | - | chr3.4:89455909-89455928 | None:intergenic | 35.0% |
| !! | GCCTACATAATTTTGGAAGT+GGG | + | chr3.4:89459850-89459869 | MS.gene054635:intron | 35.0% |
| !! | TGGTTCTATTGGTGTTGTAA+AGG | + | chr3.4:89454733-89454752 | MS.gene054635:CDS | 35.0% |
| !!! | CTATGCTGGTTTTGGAAATA+GGG | + | chr3.4:89460082-89460101 | MS.gene054635:CDS | 35.0% |
| !!! | GAGTTGTAATTTTGATTCCG+AGG | + | chr3.4:89454514-89454533 | MS.gene054635:CDS | 35.0% |
| !!! | GTAATTTTGATTCCGAGGAT+GGG | + | chr3.4:89454519-89454538 | MS.gene054635:CDS | 35.0% |
| !!! | TCTATGCTGGTTTTGGAAAT+AGG | + | chr3.4:89460081-89460100 | MS.gene054635:CDS | 35.0% |
| !!! | TGCAGGAGGATTTTAATTCA+TGG | + | chr3.4:89460615-89460634 | MS.gene054635:intron | 35.0% |
| !!! | TGTAATTTTGATTCCGAGGA+TGG | + | chr3.4:89454518-89454537 | MS.gene054635:CDS | 35.0% |
| AAAAGTCTCTAACTCTGGTG+TGG | + | chr3.4:89458278-89458297 | MS.gene054635:intron | 40.0% | |
| AAACAATCACCAAGAGAGTG+TGG | - | chr3.4:89456084-89456103 | None:intergenic | 40.0% | |
| AACAAGTACATTATACCCCC+AGG | - | chr3.4:89456990-89457009 | None:intergenic | 40.0% | |
| AAGCACTCGTAAGACTGTTT+AGG | + | chr3.4:89454997-89455016 | MS.gene054635:intron | 40.0% | |
| AAGTGGTCTACGAATCAAGA+TGG | + | chr3.4:89454680-89454699 | MS.gene054635:CDS | 40.0% | |
| AATAAATAGCATGCTGGTCG+TGG | + | chr3.4:89460426-89460445 | MS.gene054635:intron | 40.0% | |
| AATCATCACCATGGTACGTT+CGG | + | chr3.4:89454291-89454310 | MS.gene054635:CDS | 40.0% | |
| AATTCCCCATAGAGAGACAT+AGG | + | chr3.4:89455607-89455626 | MS.gene054635:intron | 40.0% | |
| ACATAAGCAAACCTTGACTG+CGG | - | chr3.4:89458414-89458433 | None:intergenic | 40.0% | |
| ACGATTCCTATGTCTCTCTA+TGG | - | chr3.4:89455616-89455635 | None:intergenic | 40.0% | |
| AGTTTGTCAGGCCTTTCTTA+TGG | + | chr3.4:89460228-89460247 | MS.gene054635:intron | 40.0% | |
| ATAAATAGCATGCTGGTCGT+GGG | + | chr3.4:89460427-89460446 | MS.gene054635:intron | 40.0% | |
| ATACGAGTGAATGCAAGACT+TGG | - | chr3.4:89454913-89454932 | None:intergenic | 40.0% | |
| ATTCATTTCTTTAGGCCTGG+GGG | + | chr3.4:89456972-89456991 | MS.gene054635:intron | 40.0% | |
| CACTAAGAATGCTGATGTAG+TGG | + | chr3.4:89455807-89455826 | MS.gene054635:CDS | 40.0% | |
| CAGAATGAATGATCGATACG+AGG | + | chr3.4:89456182-89456201 | MS.gene054635:CDS | 40.0% | |
| CGATTCCTATGTCTCTCTAT+GGG | - | chr3.4:89455615-89455634 | None:intergenic | 40.0% | |
| CTACATAAGGCTGTATTTCC+AGG | - | chr3.4:89456838-89456857 | None:intergenic | 40.0% | |
| CTGCAAATGAGAAATCGACA+AGG | - | chr3.4:89458758-89458777 | None:intergenic | 40.0% | |
| CTTGACTGCGGAGAATAAAT+GGG | - | chr3.4:89458402-89458421 | None:intergenic | 40.0% | |
| GAATGATCGTATCGTGATCT+CGG | + | chr3.4:89457630-89457649 | MS.gene054635:CDS | 40.0% | |
| GACCAACAAAGTCTACATTC+AGG | + | chr3.4:89455511-89455530 | MS.gene054635:intron | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr3.4:89455409-89455428 | None:intergenic | 40.0% | |
| GAGGTTATGTATCTTGCTCA+TGG | + | chr3.4:89454860-89454879 | MS.gene054635:CDS | 40.0% | |
| GATCTCCTTGATGTTTCACT+AGG | - | chr3.4:89456108-89456127 | None:intergenic | 40.0% | |
| GATTCCTATGTCTCTCTATG+GGG | - | chr3.4:89455614-89455633 | None:intergenic | 40.0% | |
| GCCCATTATTGCACTATTGA+TGG | + | chr3.4:89458556-89458575 | MS.gene054635:intron | 40.0% | |
| GGAAAACAAAATCATGCAGG+TGG | + | chr3.4:89457148-89457167 | MS.gene054635:intron | 40.0% | |
| GGTGAATTTGAAGATGGTGT+TGG | + | chr3.4:89454614-89454633 | MS.gene054635:CDS | 40.0% | |
| GGTTATGTATCTTGCTCATG+GGG | + | chr3.4:89454862-89454881 | MS.gene054635:CDS | 40.0% | |
| GTACAATGTGGAAGATGTTG+AGG | + | chr3.4:89455882-89455901 | MS.gene054635:CDS | 40.0% | |
| GTACCTTGAAATATGCTTCC+TGG | + | chr3.4:89456817-89456836 | MS.gene054635:intron | 40.0% | |
| GTCATAGACTATAGAGAGAC+GGG | + | chr3.4:89455305-89455324 | MS.gene054635:intron | 40.0% | |
| GTGAGTGGTGAATTTGAAGA+TGG | + | chr3.4:89454608-89454627 | MS.gene054635:CDS | 40.0% | |
| TAAGAATGCTGATGTAGTGG+AGG | + | chr3.4:89455810-89455829 | MS.gene054635:CDS | 40.0% | |
| TAGAGAGGGAAAAAGTCCAT+CGG | - | chr3.4:89459016-89459035 | None:intergenic | 40.0% | |
| TAGTGCGTAACAGTTTAGGT+TGG | + | chr3.4:89458016-89458035 | MS.gene054635:intron | 40.0% | |
| TCAACAAGCAACTCTTCATC+TGG | + | chr3.4:89457175-89457194 | MS.gene054635:CDS | 40.0% | |
| TCCCTGAATGTAGACTTTGT+TGG | - | chr3.4:89455516-89455535 | None:intergenic | 40.0% | |
| TCTTGCTGAACAATGATTGC+AGG | + | chr3.4:89460598-89460617 | MS.gene054635:intron | 40.0% | |
| TGAAATTCTCCTTCAGGGTA+CGG | + | chr3.4:89455771-89455790 | MS.gene054635:intron | 40.0% | |
| TGAGATTTAGGAACTAGGCA+TGG | + | chr3.4:89457024-89457043 | MS.gene054635:intron | 40.0% | |
| TGAGCCTAGTATGTACAATG+TGG | + | chr3.4:89455870-89455889 | MS.gene054635:CDS | 40.0% | |
| TTAGGGAGCTACATTAGTCA+AGG | + | chr3.4:89454185-89454204 | MS.gene054635:CDS | 40.0% | |
| TTATACCAGCTCTCTTACCA+GGG | - | chr3.4:89456560-89456579 | None:intergenic | 40.0% | |
| TTTATACCAGCTCTCTTACC+AGG | - | chr3.4:89456561-89456580 | None:intergenic | 40.0% | |
| ! | AGTGCGTAACAGTTTAGGTT+GGG | + | chr3.4:89458017-89458036 | MS.gene054635:intron | 40.0% |
| ! | CATCGTTGAATCTGAAGCAA+GGG | + | chr3.4:89457401-89457420 | MS.gene054635:CDS | 40.0% |
| ! | CTTTTTCTACAGCTATGCTG+GGG | + | chr3.4:89457443-89457462 | MS.gene054635:CDS | 40.0% |
| ! | GAGAATGAGGATGGTTCTAT+TGG | + | chr3.4:89454722-89454741 | MS.gene054635:CDS | 40.0% |
| ! | GAGTCCAGTGATTGACTTAA+AGG | - | chr3.4:89456402-89456421 | None:intergenic | 40.0% |
| ! | GATGGCAAAGTTTTACCAGA+GGG | + | chr3.4:89458973-89458992 | MS.gene054635:CDS | 40.0% |
| ! | GGTCTTTGAGTTTCATTCTC+AGG | + | chr3.4:89455831-89455850 | MS.gene054635:CDS | 40.0% |
| ! | TCTTTTCATTCACTTGCGTC+AGG | + | chr3.4:89457970-89457989 | MS.gene054635:intron | 40.0% |
| ! | TTGGCATCATTTGGAATAGG+TGG | - | chr3.4:89457259-89457278 | None:intergenic | 40.0% |
| !! | AGCATAGAACGGATTGCAAT+CGG | - | chr3.4:89460069-89460088 | None:intergenic | 40.0% |
| !! | CTTGTCGATTTCTCATTTGC+AGG | + | chr3.4:89458756-89458775 | MS.gene054635:intron | 40.0% |
| !! | GGAAGCATTGGTAACACAAT+AGG | - | chr3.4:89455980-89455999 | None:intergenic | 40.0% |
| !! | GTTCGGTTTGGTAAATTCCA+AGG | + | chr3.4:89454308-89454327 | MS.gene054635:CDS | 40.0% |
| !! | TAAACAGAAAGGCATTCACC+TGG | - | chr3.4:89459465-89459484 | None:intergenic | 40.0% |
| !! | TTAGGGGATTGACTTGTGAA+TGG | - | chr3.4:89459642-89459661 | None:intergenic | 40.0% |
| !! | TTGGTCTTATGTTTGGGAGA+AGG | + | chr3.4:89454582-89454601 | MS.gene054635:CDS | 40.0% |
| !!! | AATCCGTTCTATGCTGGTTT+TGG | + | chr3.4:89460074-89460093 | MS.gene054635:CDS | 40.0% |
| !!! | CACTTTTTCTACAGCTATGC+TGG | + | chr3.4:89457441-89457460 | MS.gene054635:CDS | 40.0% |
| !!! | GAACTAGGCATGGTGTTTTT+TGG | + | chr3.4:89457034-89457053 | MS.gene054635:intron | 40.0% |
| AAAGCAGTTACTGCATGAGC+AGG | + | chr3.4:89456476-89456495 | MS.gene054635:CDS | 45.0% | |
| ACAAGCAACTCTTCATCTGG+TGG | + | chr3.4:89457178-89457197 | MS.gene054635:CDS | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr3.4:89455440-89455459 | None:intergenic | 45.0% | |
| ACTCTTCATCTGGTGGAAAC+TGG | + | chr3.4:89457185-89457204 | MS.gene054635:CDS | 45.0% | |
| AGAAGAGGTTTCTGTGGTAG+AGG | + | chr3.4:89454778-89454797 | MS.gene054635:CDS | 45.0% | |
| AGAGAGGGAAAAAGTCCATC+GGG | - | chr3.4:89459015-89459034 | None:intergenic | 45.0% | |
| ATGTGTGAGTGATGGTCACT+TGG | + | chr3.4:89459484-89459503 | MS.gene054635:intron | 45.0% | |
| ATTCTCTTCGTCTGAACTCG+AGG | - | chr3.4:89456136-89456155 | None:intergenic | 45.0% | |
| ATTGCCTTCACGGTATAGAG+AGG | - | chr3.4:89459031-89459050 | None:intergenic | 45.0% | |
| CACATAATTCTCGGTCATCC+TGG | - | chr3.4:89456014-89456033 | None:intergenic | 45.0% | |
| CCATTTATTCTCCGCAGTCA+AGG | + | chr3.4:89458400-89458419 | MS.gene054635:CDS | 45.0% | |
| CCTTGACTGCGGAGAATAAA+TGG | - | chr3.4:89458403-89458422 | None:intergenic | 45.0% | |
| CTCAAGTGAGCAAACTCATG+AGG | + | chr3.4:89454841-89454860 | MS.gene054635:CDS | 45.0% | |
| CTGGTGGAAACTGGAGAATT+TGG | + | chr3.4:89457194-89457213 | MS.gene054635:CDS | 45.0% | |
| CTTAAGGTTGGAATCCCGTT+GGG | + | chr3.4:89460125-89460144 | MS.gene054635:CDS | 45.0% | |
| CTTCAGGGTACGGAAACTAA+GGG | + | chr3.4:89455781-89455800 | MS.gene054635:intron | 45.0% | |
| CTTGCATTCACTCGTATCTC+AGG | + | chr3.4:89454916-89454935 | MS.gene054635:CDS | 45.0% | |
| GAAATAACAACAGGACCCTC+TGG | - | chr3.4:89458991-89459010 | None:intergenic | 45.0% | |
| GAAGAGGTTTCTGTGGTAGA+GGG | + | chr3.4:89454779-89454798 | MS.gene054635:CDS | 45.0% | |
| GAGTGTAGAAGAGGTTTCTG+TGG | + | chr3.4:89454772-89454791 | MS.gene054635:CDS | 45.0% | |
| GATGCTATCTGTTCGGAAGT+TGG | - | chr3.4:89457385-89457404 | None:intergenic | 45.0% | |
| GATTGCAATCCGTTCTATGC+TGG | + | chr3.4:89460068-89460087 | MS.gene054635:CDS | 45.0% | |
| GCAGCAATTGAGTGTAGAAG+AGG | + | chr3.4:89454763-89454782 | MS.gene054635:CDS | 45.0% | |
| GCGAAAAATGCCAGCCAAAT+GGG | + | chr3.4:89455261-89455280 | MS.gene054635:intron | 45.0% | |
| GTCATAGCTGTTGACCAAGT+TGG | + | chr3.4:89457127-89457146 | MS.gene054635:intron | 45.0% | |
| GTCGTCGTTCAACAACAAGA+CGG | + | chr3.4:89454260-89454279 | MS.gene054635:CDS | 45.0% | |
| TATACCAGCTCTCTTACCAG+GGG | - | chr3.4:89456559-89456578 | None:intergenic | 45.0% | |
| TATCTTGCTCATGGGGAAAC+TGG | + | chr3.4:89454869-89454888 | MS.gene054635:CDS | 45.0% | |
| TCAAGATGGTGATCATGCTG+TGG | + | chr3.4:89454694-89454713 | MS.gene054635:CDS | 45.0% | |
| TCCTACAGGTCAGATGTTCT+TGG | + | chr3.4:89458329-89458348 | MS.gene054635:intron | 45.0% | |
| TCTAAGCGTTCGCGAATACT+TGG | + | chr3.4:89454563-89454582 | MS.gene054635:CDS | 45.0% | |
| TCTAGATCCTGATCTGCTCA+AGG | - | chr3.4:89457227-89457246 | None:intergenic | 45.0% | |
| TCTATGCATGCACTCGTGAA+TGG | + | chr3.4:89460308-89460327 | MS.gene054635:CDS | 45.0% | |
| TGAGATTGCCGCGAATTTGT+TGG | + | chr3.4:89454652-89454671 | MS.gene054635:CDS | 45.0% | |
| TGCAGTTCAATGCCACCAAT+TGG | + | chr3.4:89458044-89458063 | MS.gene054635:intron | 45.0% | |
| TGCGAAAAATGCCAGCCAAA+TGG | + | chr3.4:89455260-89455279 | MS.gene054635:intron | 45.0% | |
| TGCTGAACAATGATTGCAGG+AGG | + | chr3.4:89460601-89460620 | MS.gene054635:intron | 45.0% | |
| TTACCAAACCGAACGTACCA+TGG | - | chr3.4:89454302-89454321 | None:intergenic | 45.0% | |
| TTGAACGACGACGATATCGA+CGG | - | chr3.4:89454252-89454271 | None:intergenic | 45.0% | |
| TTGCCTTCACGGTATAGAGA+GGG | - | chr3.4:89459030-89459049 | None:intergenic | 45.0% | |
| TTTCCCTCTCTATACCGTGA+AGG | + | chr3.4:89459024-89459043 | MS.gene054635:CDS | 45.0% | |
| ! | AGTCACTTTAGTCCCTGAGT+GGG | - | chr3.4:89455587-89455606 | None:intergenic | 45.0% |
| ! | CATTTCAGGTCATCTTTGCC+AGG | - | chr3.4:89456432-89456451 | None:intergenic | 45.0% |
| ! | GACTACTCTTTTCCCACTCA+GGG | + | chr3.4:89455572-89455591 | MS.gene054635:intron | 45.0% |
| ! | GCATCGTTGAATCTGAAGCA+AGG | + | chr3.4:89457400-89457419 | MS.gene054635:CDS | 45.0% |
| ! | GCTGTTGTAACTGGAAGCAT+TGG | - | chr3.4:89455992-89456011 | None:intergenic | 45.0% |
| ! | GGATGGCAAAGTTTTACCAG+AGG | + | chr3.4:89458972-89458991 | MS.gene054635:intron | 45.0% |
| ! | GTGAATGCAAGACTTGGTCA+TGG | - | chr3.4:89454907-89454926 | None:intergenic | 45.0% |
| ! | TAGTCACTTTAGTCCCTGAG+TGG | - | chr3.4:89455588-89455607 | None:intergenic | 45.0% |
| ! | TGACTACTCTTTTCCCACTC+AGG | + | chr3.4:89455571-89455590 | MS.gene054635:intron | 45.0% |
| !! | GAGCACTGAGAAAAAGCAGT+TGG | - | chr3.4:89458792-89458811 | None:intergenic | 45.0% |
| !! | TAGAACGGATTGCAATCGGA+AGG | - | chr3.4:89460065-89460084 | None:intergenic | 45.0% |
| !!! | TTATTTTGAATATTAAATAA+TGG | - | chr3.4:89460411-89460430 | None:intergenic | 5.0% |
| ACCGAATGGATGAAAGGGAC+CGG | - | chr3.4:89454225-89454244 | None:intergenic | 50.0% | |
| AGAGGGAAAAAGTCCATCGG+GGG | - | chr3.4:89459013-89459032 | None:intergenic | 50.0% | |
| AGGATGGGAAGATTGTAGGG+AGG | + | chr3.4:89454534-89454553 | MS.gene054635:CDS | 50.0% | |
| ATACCAGCTCTCTTACCAGG+GGG | - | chr3.4:89456558-89456577 | None:intergenic | 50.0% | |
| ATCGTGATCTCGGATGTGGA+TGG | + | chr3.4:89457640-89457659 | MS.gene054635:CDS | 50.0% | |
| CAAGGCGTATACACCGTTTC+CGG | + | chr3.4:89454203-89454222 | MS.gene054635:CDS | 50.0% | |
| CAGTTACTGCATGAGCAGGA+AGG | + | chr3.4:89456480-89456499 | MS.gene054635:CDS | 50.0% | |
| CCAACGGGATTCCAACCTTA+AGG | - | chr3.4:89460127-89460146 | None:intergenic | 50.0% | |
| CCATCGGGGGAAATAACAAC+AGG | - | chr3.4:89459000-89459019 | None:intergenic | 50.0% | |
| CCCTACAATCTTCCCATCCT+CGG | - | chr3.4:89454534-89454553 | None:intergenic | 50.0% | |
| CCCTAGAAATGAGGATGCTG+CGG | + | chr3.4:89456299-89456318 | MS.gene054635:CDS | 50.0% | |
| CCGAGGATGGGAAGATTGTA+GGG | + | chr3.4:89454531-89454550 | MS.gene054635:CDS | 50.0% | |
| CCGCAGCATCCTCATTTCTA+GGG | - | chr3.4:89456302-89456321 | None:intergenic | 50.0% | |
| CCTAGAAATGAGGATGCTGC+GGG | + | chr3.4:89456300-89456319 | MS.gene054635:CDS | 50.0% | |
| CCTGATCTGCTCAAGGAGAA+AGG | - | chr3.4:89457220-89457239 | None:intergenic | 50.0% | |
| CCTTAAGGTTGGAATCCCGT+TGG | + | chr3.4:89460124-89460143 | MS.gene054635:CDS | 50.0% | |
| CCTTAGTTTCCGTACCCTGA+AGG | - | chr3.4:89455783-89455802 | None:intergenic | 50.0% | |
| CCTTCAGGGTACGGAAACTA+AGG | + | chr3.4:89455780-89455799 | MS.gene054635:intron | 50.0% | |
| CCTTTCTCCTTGAGCAGATC+AGG | + | chr3.4:89457217-89457236 | MS.gene054635:CDS | 50.0% | |
| CTAGAAATGAGGATGCTGCG+GGG | + | chr3.4:89456301-89456320 | MS.gene054635:CDS | 50.0% | |
| CTATAGACGGGGTACAGTAC+AGG | - | chr3.4:89458682-89458701 | None:intergenic | 50.0% | |
| GACCAGTCAACACCAACCAA+AGG | - | chr3.4:89458365-89458384 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr3.4:89455441-89455460 | None:intergenic | 50.0% | |
| GAGAGGGAAAAAGTCCATCG+GGG | - | chr3.4:89459014-89459033 | None:intergenic | 50.0% | |
| GCCAAGAACATCTGACCTGT+AGG | - | chr3.4:89458333-89458352 | None:intergenic | 50.0% | |
| GTCATCCTGGCTGTTGTAAC+TGG | - | chr3.4:89456001-89456020 | None:intergenic | 50.0% | |
| TAGAAATGAGGATGCTGCGG+GGG | + | chr3.4:89456302-89456321 | MS.gene054635:CDS | 50.0% | |
| TCAACTCCACCACACTCTCT+TGG | + | chr3.4:89456072-89456091 | MS.gene054635:CDS | 50.0% | |
| TCACCATGGTACGTTCGGTT+TGG | + | chr3.4:89454296-89454315 | MS.gene054635:CDS | 50.0% | |
| TCCGAGGATGGGAAGATTGT+AGG | + | chr3.4:89454530-89454549 | MS.gene054635:CDS | 50.0% | |
| TCCGGTCCCTTTCATCCATT+CGG | + | chr3.4:89454221-89454240 | MS.gene054635:CDS | 50.0% | |
| TCGTATCGTGATCTCGGATG+TGG | + | chr3.4:89457636-89457655 | MS.gene054635:CDS | 50.0% | |
| TCTTCGTCTGAACTCGAGGA+CGG | - | chr3.4:89456132-89456151 | None:intergenic | 50.0% | |
| TCTTGGCCAGTTCATGCCTT+TGG | + | chr3.4:89458346-89458365 | MS.gene054635:CDS | 50.0% | |
| TGCTTCCAGTTACAACAGCC+AGG | + | chr3.4:89455993-89456012 | MS.gene054635:CDS | 50.0% | |
| TGGATGAAAGGGACCGGAAA+CGG | - | chr3.4:89454219-89454238 | None:intergenic | 50.0% | |
| TGGTGATCATGCTGTGGTAG+TGG | + | chr3.4:89454700-89454719 | MS.gene054635:CDS | 50.0% | |
| TTTGGGAGAAGGTCTGTGAG+TGG | + | chr3.4:89454593-89454612 | MS.gene054635:CDS | 50.0% | |
| ! | CAATCACCAAGAGAGTGTGG+TGG | - | chr3.4:89456081-89456100 | None:intergenic | 50.0% |
| ! | CACCAACCAAAGGCATGAAC+TGG | - | chr3.4:89458355-89458374 | None:intergenic | 50.0% |
| ! | CGTTGAATCTGAAGCAAGGG+AGG | + | chr3.4:89457404-89457423 | MS.gene054635:CDS | 50.0% |
| !! | CCTGTTGTTATTTCCCCCGA+TGG | + | chr3.4:89458997-89459016 | MS.gene054635:CDS | 50.0% |
| !! | CTGCTCAGAAGTGCTTGTTG+CGG | - | chr3.4:89460342-89460361 | None:intergenic | 50.0% |
| !! | GTGGTAGAGGGTGTTGAAGA+GGG | + | chr3.4:89454791-89454810 | MS.gene054635:CDS | 50.0% |
| !! | GTGGTAGTGGAGAATGAGGA+TGG | + | chr3.4:89454713-89454732 | MS.gene054635:CDS | 50.0% |
| !! | TGCCTTTGGTTGGTGTTGAC+TGG | + | chr3.4:89458360-89458379 | MS.gene054635:CDS | 50.0% |
| !! | TGCTCAGAAGTGCTTGTTGC+GGG | - | chr3.4:89460341-89460360 | None:intergenic | 50.0% |
| !! | TGCTGTGGTAGTGGAGAATG+AGG | + | chr3.4:89454709-89454728 | MS.gene054635:CDS | 50.0% |
| !! | TGTGGTAGAGGGTGTTGAAG+AGG | + | chr3.4:89454790-89454809 | MS.gene054635:CDS | 50.0% |
| AGCTATGCTGGGGAAACAGC+AGG | + | chr3.4:89457453-89457472 | MS.gene054635:CDS | 55.0% | |
| ATGCAAGCGGTGGGGAGATT+AGG | + | chr3.4:89454167-89454186 | MS.gene054635:CDS | 55.0% | |
| CCCGCAGCATCCTCATTTCT+AGG | - | chr3.4:89456303-89456322 | None:intergenic | 55.0% | |
| CGCAACAAGCACTTCTGAGC+AGG | + | chr3.4:89460340-89460359 | MS.gene054635:CDS | 55.0% | |
| GCGCCACCGAATGGATGAAA+GGG | - | chr3.4:89454230-89454249 | None:intergenic | 55.0% | |
| GGCCAGTTCATGCCTTTGGT+TGG | + | chr3.4:89458350-89458369 | MS.gene054635:CDS | 55.0% | |
| GGTCCCTTTCATCCATTCGG+TGG | + | chr3.4:89454224-89454243 | MS.gene054635:CDS | 55.0% | |
| TACCAGCTCTCTTACCAGGG+GGG | - | chr3.4:89456557-89456576 | None:intergenic | 55.0% | |
| TCACTGGACTCGGCATTTCC+TGG | + | chr3.4:89456411-89456430 | MS.gene054635:CDS | 55.0% | |
| TGCAAGCGGTGGGGAGATTA+GGG | + | chr3.4:89454168-89454187 | MS.gene054635:CDS | 55.0% | |
| TGCTCATGGGGAAACTGGTG+AGG | + | chr3.4:89454874-89454893 | MS.gene054635:CDS | 55.0% | |
| ! | CAGCCAAATGGGCTTGACGT+GGG | + | chr3.4:89455272-89455291 | MS.gene054635:intron | 55.0% |
| !! | GCTCAGAAGTGCTTGTTGCG+GGG | - | chr3.4:89460340-89460359 | None:intergenic | 55.0% |
| !! | GGTGTTGACTGGTCACAGAC+TGG | + | chr3.4:89458371-89458390 | MS.gene054635:CDS | 55.0% |
| ACTACGCTGAATCTCCCCCC+TGG | + | chr3.4:89456540-89456559 | MS.gene054635:CDS | 60.0% | |
| AGGATGCTGCGGGGGAAGTT+GGG | + | chr3.4:89456310-89456329 | MS.gene054635:CDS | 60.0% | |
| AGGCCCACGTCAAGCCCATT+TGG | - | chr3.4:89455278-89455297 | None:intergenic | 60.0% | |
| ATATCGACGGCGCCACCGAA+TGG | - | chr3.4:89454239-89454258 | None:intergenic | 60.0% | |
| CCACGTCAAGCCCATTTGGC+TGG | - | chr3.4:89455274-89455293 | None:intergenic | 60.0% | |
| GGCGCCACCGAATGGATGAA+AGG | - | chr3.4:89454231-89454250 | None:intergenic | 60.0% | |
| GGGGAAGTTGGGCAGCATAC+AGG | + | chr3.4:89456321-89456340 | MS.gene054635:CDS | 60.0% | |
| ! | AGCATCTGGGGTCGGATTCC+AGG | + | chr3.4:89459444-89459463 | MS.gene054635:intron | 60.0% |
| ! | CCAGCCAAATGGGCTTGACG+TGG | + | chr3.4:89455271-89455290 | MS.gene054635:intron | 60.0% |
| ! | TGCTGGTCGTGGGAGAGTAC+CGG | + | chr3.4:89460437-89460456 | MS.gene054635:intron | 60.0% |
| CTCCCCCCTGGTAAGAGAGC+TGG | + | chr3.4:89456552-89456571 | MS.gene054635:intron | 65.0% | |
| GAGGATGCTGCGGGGGAAGT+TGG | + | chr3.4:89456309-89456328 | MS.gene054635:CDS | 65.0% | |
| !! | CTGGTCGTGGGAGAGTACCG+GGG | + | chr3.4:89460439-89460458 | MS.gene054635:intron | 65.0% |
| !! | GCTGGTCGTGGGAGAGTACC+GGG | + | chr3.4:89460438-89460457 | MS.gene054635:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 89454167 | 89460676 | 89454167 | ID=MS.gene054635 |
| chr3.4 | mRNA | 89454167 | 89460676 | 89454167 | ID=MS.gene054635.t1;Parent=MS.gene054635 |
| chr3.4 | exon | 89454167 | 89454937 | 89454167 | ID=MS.gene054635.t1.exon1;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89454167 | 89454937 | 89454167 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89455787 | 89456561 | 89455787 | ID=MS.gene054635.t1.exon2;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89455787 | 89456561 | 89455787 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89457167 | 89457474 | 89457167 | ID=MS.gene054635.t1.exon3;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89457167 | 89457474 | 89457167 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89457601 | 89457674 | 89457601 | ID=MS.gene054635.t1.exon4;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89457601 | 89457674 | 89457601 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89458337 | 89458421 | 89458337 | ID=MS.gene054635.t1.exon5;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89458337 | 89458421 | 89458337 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89458778 | 89458864 | 89458778 | ID=MS.gene054635.t1.exon6;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89458778 | 89458864 | 89458778 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89458973 | 89459045 | 89458973 | ID=MS.gene054635.t1.exon7;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89458973 | 89459045 | 89458973 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89459330 | 89459373 | 89459330 | ID=MS.gene054635.t1.exon8;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89459330 | 89459373 | 89459330 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89460044 | 89460172 | 89460044 | ID=MS.gene054635.t1.exon9;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89460044 | 89460172 | 89460044 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89460263 | 89460361 | 89460263 | ID=MS.gene054635.t1.exon10;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89460263 | 89460361 | 89460263 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| chr3.4 | exon | 89460620 | 89460676 | 89460620 | ID=MS.gene054635.t1.exon11;Parent=MS.gene054635.t1 |
| chr3.4 | CDS | 89460620 | 89460676 | 89460620 | ID=cds.MS.gene054635.t1;Parent=MS.gene054635.t1 |
| Gene Sequence |
| Protein sequence |
