Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48495.t1 | XP_003603031.1 | 92.6 | 834 | 57 | 2 | 1 | 831 | 1 | 832 | 0.00E+00 | 1533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48495.t1 | Q9FMN2 | 43.9 | 959 | 373 | 26 | 1 | 827 | 1 | 926 | 2.8e-170 | 600.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48495.t1 | G7J6C5 | 92.6 | 834 | 57 | 2 | 1 | 831 | 1 | 832 | 0.0e+00 | 1533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054635 | MS.gene48495 | 0.946143 | 8.09E-105 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48495 | MS.gene073815 | PPI |
| MS.gene30874 | MS.gene48495 | PPI |
| MS.gene22487 | MS.gene48495 | PPI |
| MS.gene48495 | MS.gene09815 | PPI |
| MS.gene068563 | MS.gene48495 | PPI |
| MS.gene48495 | MS.gene018524 | PPI |
| MS.gene061927 | MS.gene48495 | PPI |
| MS.gene029899 | MS.gene48495 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48495.t1 | MTR_3g101590 | 92.455 | 835 | 58 | 2 | 1 | 832 | 1 | 833 | 0.0 | 1563 |
| MS.gene48495.t1 | MTR_3g101590 | 92.038 | 741 | 54 | 2 | 1 | 738 | 1 | 739 | 0.0 | 1372 |
| MS.gene48495.t1 | MTR_1g019740 | 83.065 | 248 | 41 | 1 | 580 | 826 | 128 | 375 | 2.63e-147 | 438 |
| MS.gene48495.t1 | MTR_1g019740 | 83.065 | 248 | 41 | 1 | 580 | 826 | 268 | 515 | 2.52e-145 | 438 |
| MS.gene48495.t1 | MTR_1g019740 | 44.872 | 234 | 108 | 8 | 1 | 222 | 1 | 225 | 1.17e-42 | 163 |
| MS.gene48495.t1 | MTR_7g100370 | 68.810 | 311 | 84 | 3 | 522 | 826 | 559 | 862 | 1.97e-143 | 445 |
| MS.gene48495.t1 | MTR_7g100370 | 59.375 | 128 | 42 | 3 | 1 | 127 | 1 | 119 | 9.26e-40 | 159 |
| MS.gene48495.t1 | MTR_1g067380 | 66.776 | 304 | 99 | 1 | 523 | 826 | 619 | 920 | 3.81e-139 | 436 |
| MS.gene48495.t1 | MTR_1g067380 | 67.000 | 100 | 33 | 0 | 1 | 100 | 1 | 100 | 1.43e-39 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48495.t1 | AT5G42870 | 71.475 | 305 | 74 | 2 | 526 | 830 | 638 | 929 | 7.89e-152 | 469 |
| MS.gene48495.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 5.36e-50 | 190 |
| MS.gene48495.t1 | AT5G42870 | 70.492 | 305 | 72 | 3 | 526 | 830 | 638 | 924 | 3.90e-147 | 456 |
| MS.gene48495.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 3.53e-50 | 191 |
| MS.gene48495.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 517 | 826 | 587 | 899 | 4.20e-137 | 429 |
| MS.gene48495.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 517 | 826 | 587 | 899 | 4.20e-137 | 429 |
| MS.gene48495.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 517 | 826 | 587 | 899 | 4.20e-137 | 429 |
| MS.gene48495.t1 | AT3G09560 | 64.198 | 324 | 91 | 5 | 517 | 826 | 587 | 899 | 4.20e-137 | 429 |
| MS.gene48495.t1 | AT5G42870 | 71.154 | 260 | 62 | 2 | 526 | 785 | 638 | 884 | 4.84e-122 | 390 |
| MS.gene48495.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 5.82e-50 | 190 |
Find 180 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGTTAGTTTGAGATTT+TGG | 0.141100 | 3.1:-80640400 | None:intergenic |
| CGTCTAAGTTTAAGCATTTC+AGG | 0.146908 | 3.1:-80640924 | None:intergenic |
| CCTTGACTGCGGAGAATAAA+TGG | 0.155534 | 3.1:-80642881 | None:intergenic |
| ATCTTCTTTATCTATATATT+CGG | 0.201131 | 3.1:-80640698 | None:intergenic |
| CGAATACTTGGTCTTATGTT+TGG | 0.225017 | 3.1:+80639059 | MS.gene48495:CDS |
| AAAATCTCAAACTAACAATT+TGG | 0.253796 | 3.1:+80640402 | MS.gene48495:CDS |
| TTTCGTCAAGGTCACTAAAA+AGG | 0.268524 | 3.1:-80640639 | None:intergenic |
| TTATTACCAGAAGAAATATT+TGG | 0.281868 | 3.1:-80640832 | None:intergenic |
| CCCGCAGCATCCTCATTTCT+AGG | 0.284851 | 3.1:-80640781 | None:intergenic |
| GAGTCCAGTGATTGACTTAA+AGG | 0.287905 | 3.1:-80640880 | None:intergenic |
| CTCAAATATATCTGTGGAAA+TGG | 0.299611 | 3.1:+80642089 | MS.gene48495:CDS |
| ATGCAAGCGGTGGGGAGATT+AGG | 0.300952 | 3.1:+80638651 | MS.gene48495:CDS |
| CTCATTTCTAGGGATAACTA+TGG | 0.305863 | 3.1:-80640770 | None:intergenic |
| CCTTTCTCCTTGAGCAGATC+AGG | 0.311428 | 3.1:+80641698 | MS.gene48495:CDS |
| AATCCGTTCTATGCTGGTTT+TGG | 0.317235 | 3.1:+80644544 | MS.gene48495:CDS |
| GTCATCCTGGTTGTTGTAAC+TGG | 0.318251 | 3.1:-80640479 | None:intergenic |
| GAATACTTGGTCTTATGTTT+GGG | 0.323830 | 3.1:+80639060 | MS.gene48495:CDS |
| CTGGTGGAAACTGGAGAATT+TGG | 0.328889 | 3.1:+80641675 | MS.gene48495:CDS |
| TCCTTGCCAAATATTTCTTC+TGG | 0.329362 | 3.1:+80640826 | MS.gene48495:CDS |
| TTCAGAATCTTGATAAGCTT+TGG | 0.339252 | 3.1:-80640986 | None:intergenic |
| TCTTCTTTATCTATATATTC+GGG | 0.340266 | 3.1:-80640697 | None:intergenic |
| TCACTGGACTCGGCATTTCC+TGG | 0.342801 | 3.1:+80640892 | MS.gene48495:CDS |
| TGCTCAGAAGTGCTTGTTGC+GGG | 0.342914 | 3.1:-80644812 | None:intergenic |
| ACTCTTCATCTGGTGGAAAC+TGG | 0.364263 | 3.1:+80641666 | MS.gene48495:CDS |
| CCAACGGGATTCCAACCTTA+AGG | 0.364577 | 3.1:-80644594 | None:intergenic |
| TGCAAGCGGTGGGGAGATTA+GGG | 0.368694 | 3.1:+80638652 | MS.gene48495:CDS |
| ATTCAAAATTGCATGCTTAG+AGG | 0.375535 | 3.1:+80643831 | MS.gene48495:CDS |
| TGTTATTATCACATAATTCT+CGG | 0.384405 | 3.1:-80640501 | None:intergenic |
| TGCCTTTGGTTGGTGTTGAC+TGG | 0.386172 | 3.1:+80642841 | MS.gene48495:CDS |
| TAGGAATTGTCGTGTAATAT+AGG | 0.389831 | 3.1:-80643309 | None:intergenic |
| GGTCTTTGAGTTTCATTCTC+AGG | 0.392056 | 3.1:+80640312 | MS.gene48495:CDS |
| AATAAGATTTATTGCCTTCA+CGG | 0.393930 | 3.1:-80643520 | None:intergenic |
| TGATGAAATCAGTTACCTTA+AGG | 0.397156 | 3.1:+80644579 | MS.gene48495:CDS |
| CAAGGCGTATACACCGTTTC+CGG | 0.397395 | 3.1:+80638687 | MS.gene48495:CDS |
| TCTTGGCCAGTTCATGCCTT+TGG | 0.397799 | 3.1:+80642827 | MS.gene48495:CDS |
| TCTAAGCGTTCGCGAATACT+TGG | 0.403981 | 3.1:+80639047 | MS.gene48495:CDS |
| TCCGGTCCCTTTCATCCATT+CGG | 0.407707 | 3.1:+80638705 | MS.gene48495:CDS |
| GGAAGCATTGGTAACACAAT+AGG | 0.408443 | 3.1:-80640458 | None:intergenic |
| GATAATATTTCTTATGAGAA+TGG | 0.410235 | 3.1:+80640718 | MS.gene48495:CDS |
| CAAACTAACAATTTGGATAT+AGG | 0.410575 | 3.1:+80640409 | MS.gene48495:CDS |
| TCCTACAGGTCAGATGTTCT+TGG | 0.416257 | 3.1:+80642810 | MS.gene48495:intron |
| TATCTTGCTCATGGGGAAAC+TGG | 0.417204 | 3.1:+80639350 | MS.gene48495:CDS |
| ATTCCTACTGAATCTTAAAC+AGG | 0.423793 | 3.1:+80643325 | MS.gene48495:CDS |
| TCTTAGTCCTCAAAGATTGA+TGG | 0.424430 | 3.1:-80638977 | None:intergenic |
| CTTGCATTCACTCGTATCTC+AGG | 0.425477 | 3.1:+80639397 | MS.gene48495:CDS |
| CGCAACAAGCACTTCTGAGC+AGG | 0.427789 | 3.1:+80644814 | MS.gene48495:CDS |
| ATATTGACCATCAATCTTTG+AGG | 0.431858 | 3.1:+80638970 | MS.gene48495:CDS |
| TCTATGCATGCACTCGTGAA+TGG | 0.445811 | 3.1:+80644782 | MS.gene48495:CDS |
| TCCGAGGATGGGAAGATTGT+AGG | 0.450746 | 3.1:+80639014 | MS.gene48495:CDS |
| ATTTCTCATTTGCAGGAGAA+TGG | 0.456087 | 3.1:+80643245 | MS.gene48495:intron |
| CATTTCAGGTCATCTTTGCC+AGG | 0.457046 | 3.1:-80640910 | None:intergenic |
| GATTGCAATCCGTTCTATGC+TGG | 0.458935 | 3.1:+80644538 | MS.gene48495:CDS |
| AGAAGAGGTTTCTGTGGTAG+AGG | 0.460405 | 3.1:+80639262 | MS.gene48495:CDS |
| TCACCATGGTACGTTCGGTT+TGG | 0.460726 | 3.1:+80638780 | MS.gene48495:CDS |
| AATCATCACCATGGTACGTT+CGG | 0.462335 | 3.1:+80638775 | MS.gene48495:CDS |
| CGAATTTGTTGGATATTAAG+TGG | 0.463895 | 3.1:+80639147 | MS.gene48495:CDS |
| TGGATGAAAGGGACCGGAAA+CGG | 0.465333 | 3.1:-80638700 | None:intergenic |
| TCAAATATCAAATGCAGAAG+GGG | 0.466952 | 3.1:-80645130 | None:intergenic |
| CACCAACCAAAGGCATGAAC+TGG | 0.468960 | 3.1:-80642833 | None:intergenic |
| CACATAATTCTCGGTCATCC+TGG | 0.469202 | 3.1:-80640492 | None:intergenic |
| TCAACAAGCAACTCTTCATC+TGG | 0.473273 | 3.1:+80641656 | MS.gene48495:CDS |
| TGAGATTGCCGCGAATTTGT+TGG | 0.477774 | 3.1:+80639136 | MS.gene48495:CDS |
| AGCATAGAACGGATTGCAAT+CGG | 0.479526 | 3.1:-80644536 | None:intergenic |
| GGGGAAGTTGGGCAGCATAC+AGG | 0.479739 | 3.1:+80640802 | MS.gene48495:CDS |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 3.1:+80644583 | MS.gene48495:CDS |
| TCTGTGCAAATCTTATTCTC+TGG | 0.489728 | 3.1:-80641782 | None:intergenic |
| CTTAAGGTTGGAATCCCGTT+GGG | 0.490494 | 3.1:+80644595 | MS.gene48495:CDS |
| GATGCTATCTGTTCGGAAGT+TGG | 0.491272 | 3.1:-80641863 | None:intergenic |
| TGTGGTAGAGGGTGTTGAAG+AGG | 0.492596 | 3.1:+80639274 | MS.gene48495:CDS |
| AAATCTTCATTATAAATCCC+AGG | 0.498505 | 3.1:+80644620 | MS.gene48495:CDS |
| GAGAATGAGGATGGTTCTAT+TGG | 0.500784 | 3.1:+80639206 | MS.gene48495:CDS |
| TGGTTCTATTGGTGTTGTAA+AGG | 0.501741 | 3.1:+80639217 | MS.gene48495:CDS |
| GGCCAGTTCATGCCTTTGGT+TGG | 0.502823 | 3.1:+80642831 | MS.gene48495:CDS |
| TCCTACAATCTTCCCATCCT+CGG | 0.505404 | 3.1:-80639015 | None:intergenic |
| GCAGCAATTGAGTGTAGAAG+AGG | 0.505454 | 3.1:+80639247 | MS.gene48495:CDS |
| TTGGTCTTATGTTTGGGAGA+AGG | 0.506799 | 3.1:+80639066 | MS.gene48495:CDS |
| CTTGACTGCGGAGAATAAAT+GGG | 0.506888 | 3.1:-80642880 | None:intergenic |
| TTCAAATATCAAATGCAGAA+GGG | 0.508191 | 3.1:-80645131 | None:intergenic |
| GTTCGGTTTGGTAAATTCCA+AGG | 0.508413 | 3.1:+80638792 | MS.gene48495:CDS |
| TCAACTCCACCACACTCTCT+TGG | 0.509203 | 3.1:+80640553 | MS.gene48495:CDS |
| GAGGTTATGTATCTTGCTCA+TGG | 0.509583 | 3.1:+80639341 | MS.gene48495:CDS |
| TTTAAGTCAATCACTGGACT+CGG | 0.512647 | 3.1:+80640882 | MS.gene48495:CDS |
| GGCGCCACCGAATGGATGAA+AGG | 0.515421 | 3.1:-80638712 | None:intergenic |
| CCTGATCTGCTCAAGGAGAA+AGG | 0.515753 | 3.1:-80641698 | None:intergenic |
| GAAATAACAACAGGACCCTC+TGG | 0.516526 | 3.1:-80643470 | None:intergenic |
| TGGTGATCATGCTGTGGTAG+TGG | 0.519796 | 3.1:+80639184 | MS.gene48495:CDS |
| GTGAATTTGAAGATGGTGTT+GGG | 0.520050 | 3.1:+80639099 | MS.gene48495:CDS |
| CACTAAGAATGCTGATGTAG+TGG | 0.520432 | 3.1:+80640288 | MS.gene48495:CDS |
| GTGGTAGAGGGTGTTGAAGA+GGG | 0.522900 | 3.1:+80639275 | MS.gene48495:CDS |
| GAAGAGGTTTCTGTGGTAGA+GGG | 0.525056 | 3.1:+80639263 | MS.gene48495:CDS |
| TCTTCCACATTGTACATACT+AGG | 0.528135 | 3.1:-80640355 | None:intergenic |
| AAAGCAGTTACTGCATGAGC+AGG | 0.529161 | 3.1:+80640957 | MS.gene48495:CDS |
| GCGCCACCGAATGGATGAAA+GGG | 0.531603 | 3.1:-80638711 | None:intergenic |
| ATTCTCTTCGTCTGAACTCG+AGG | 0.531939 | 3.1:-80640614 | None:intergenic |
| CTTAATATCCAACAAATTCG+CGG | 0.532615 | 3.1:-80639144 | None:intergenic |
| CCTAGAAATGAGGATGCTGC+GGG | 0.534545 | 3.1:+80640781 | MS.gene48495:CDS |
| ATTCAACGATGCTATCTGTT+CGG | 0.535090 | 3.1:-80641870 | None:intergenic |
| GGTGTTGACTGGTCACAGAC+TGG | 0.535668 | 3.1:+80642852 | MS.gene48495:CDS |
| CCTTAAGGTTGGAATCCCGT+TGG | 0.536129 | 3.1:+80644594 | MS.gene48495:CDS |
| CTTCTTTATCTATATATTCG+GGG | 0.536957 | 3.1:-80640696 | None:intergenic |
| AGCTATGCTGGGGAAACAGC+AGG | 0.537208 | 3.1:+80641934 | MS.gene48495:CDS |
| CCCTAGAAATGAGGATGCTG+CGG | 0.537736 | 3.1:+80640780 | MS.gene48495:CDS |
| ATATCGACGGCGCCACCGAA+TGG | 0.539480 | 3.1:-80638720 | None:intergenic |
| AGGTTATGTATCTTGCTCAT+GGG | 0.540031 | 3.1:+80639342 | MS.gene48495:CDS |
| CCGCAGCATCCTCATTTCTA+GGG | 0.541811 | 3.1:-80640780 | None:intergenic |
| GAATGATCGTATCGTGATCT+CGG | 0.542030 | 3.1:+80642111 | MS.gene48495:CDS |
| ACCAGAAGAAATATTTGGCA+AGG | 0.547394 | 3.1:-80640827 | None:intergenic |
| GGTGAATTTGAAGATGGTGT+TGG | 0.551028 | 3.1:+80639098 | MS.gene48495:CDS |
| CATAGTTATCCCTAGAAATG+AGG | 0.553207 | 3.1:+80640771 | MS.gene48495:CDS |
| TTTCAAATATCAAATGCAGA+AGG | 0.555472 | 3.1:-80645132 | None:intergenic |
| TTGGCATCATTTGGAATAGG+TGG | 0.556234 | 3.1:-80641737 | None:intergenic |
| ACCGAATGGATGAAAGGGAC+CGG | 0.561783 | 3.1:-80638706 | None:intergenic |
| ATCGTGATCTCGGATGTGGA+TGG | 0.562787 | 3.1:+80642121 | MS.gene48495:CDS |
| CCATTTATTCTCCGCAGTCA+AGG | 0.563293 | 3.1:+80642881 | MS.gene48495:CDS |
| GATCTCCTTGATGTTTCACT+AGG | 0.569676 | 3.1:-80640586 | None:intergenic |
| TTGCCTTCACGGTATAGAGA+GGG | 0.572218 | 3.1:-80643509 | None:intergenic |
| TCTTCGTCTGAACTCGAGGA+CGG | 0.573184 | 3.1:-80640610 | None:intergenic |
| TTCTTTATCTATATATTCGG+GGG | 0.575747 | 3.1:-80640695 | None:intergenic |
| GTTTACCTAGTGAAACATCA+AGG | 0.578560 | 3.1:+80640581 | MS.gene48495:CDS |
| GAGTGTAGAAGAGGTTTCTG+TGG | 0.580182 | 3.1:+80639256 | MS.gene48495:CDS |
| TTAGAGAGGATGCAAGCGGT+GGG | 0.583078 | 3.1:+80638642 | None:intergenic |
| TTTCCAAAACCAGCATAGAA+CGG | 0.585939 | 3.1:-80644547 | None:intergenic |
| ACAAGCAACTCTTCATCTGG+TGG | 0.588423 | 3.1:+80641659 | MS.gene48495:CDS |
| GGTCCCTTTCATCCATTCGG+TGG | 0.589130 | 3.1:+80638708 | MS.gene48495:CDS |
| GTGAGTGGTGAATTTGAAGA+TGG | 0.589262 | 3.1:+80639092 | MS.gene48495:CDS |
| TCGTATCGTGATCTCGGATG+TGG | 0.593644 | 3.1:+80642117 | MS.gene48495:CDS |
| ATTAGAGAGGATGCAAGCGG+TGG | 0.595958 | 3.1:+80638641 | None:intergenic |
| TCACCTGTTTAAGATTCAGT+AGG | 0.597998 | 3.1:-80643328 | None:intergenic |
| TTTCCCTCTCTATACCGTGA+AGG | 0.598398 | 3.1:+80643506 | MS.gene48495:CDS |
| CAAATGTATCTTGATAACAA+AGG | 0.598518 | 3.1:+80638876 | MS.gene48495:CDS |
| CGTTGAATCTGAAGCAAGGG+AGG | 0.599581 | 3.1:+80641885 | MS.gene48495:CDS |
| TGCTCATGGGGAAACTGGTG+AGG | 0.600662 | 3.1:+80639355 | MS.gene48495:CDS |
| TCTAGATCCTGATCTGCTCA+AGG | 0.603927 | 3.1:-80641705 | None:intergenic |
| TTACCAAACCGAACGTACCA+TGG | 0.604008 | 3.1:-80638783 | None:intergenic |
| TCATTTCTAGGGATAACTAT+GGG | 0.607928 | 3.1:-80640769 | None:intergenic |
| CCTTCAGGGTACGGAAACTG+AGG | 0.609730 | 3.1:+80640261 | MS.gene48495:intron |
| TGCTGTGGTAGTGGAGAATG+AGG | 0.610182 | 3.1:+80639193 | MS.gene48495:CDS |
| CATCGTTGAATCTGAAGCAA+GGG | 0.610649 | 3.1:+80641882 | MS.gene48495:CDS |
| GTTGTTGTAACTGGAAGCAT+TGG | 0.610962 | 3.1:-80640470 | None:intergenic |
| AATCTTCATTATAAATCCCA+GGG | 0.611431 | 3.1:+80644621 | MS.gene48495:CDS |
| ATTGCCTTCACGGTATAGAG+AGG | 0.614030 | 3.1:-80643510 | None:intergenic |
| ATACGAGTGAATGCAAGACT+TGG | 0.615146 | 3.1:-80639391 | None:intergenic |
| AAGTGGTCTACGAATCAAGA+TGG | 0.615279 | 3.1:+80639164 | MS.gene48495:CDS |
| CAGAATGAATGATCGATACG+AGG | 0.617552 | 3.1:+80640663 | MS.gene48495:CDS |
| GCATCGTTGAATCTGAAGCA+AGG | 0.617570 | 3.1:+80641881 | MS.gene48495:CDS |
| TAGAAATGAGGATGCTGCGG+GGG | 0.620903 | 3.1:+80640783 | MS.gene48495:CDS |
| CTGCTCAGAAGTGCTTGTTG+CGG | 0.621225 | 3.1:-80644813 | None:intergenic |
| TAAGAATGCTGATGTAGTGG+AGG | 0.623360 | 3.1:+80640291 | MS.gene48495:CDS |
| CAGTTACTGCATGAGCAGGA+AGG | 0.623575 | 3.1:+80640961 | MS.gene48495:CDS |
| GTGAATGCAAGACTTGGTCA+TGG | 0.624514 | 3.1:-80639385 | None:intergenic |
| GCTCAGAAGTGCTTGTTGCG+GGG | 0.625841 | 3.1:-80644811 | None:intergenic |
| GGTTATGTATCTTGCTCATG+GGG | 0.626196 | 3.1:+80639343 | MS.gene48495:CDS |
| TTAAAGGAAAACGAACGTGT+TGG | 0.626793 | 3.1:-80640864 | None:intergenic |
| ATATCATCAACAGATTCTAA+CGG | 0.633737 | 3.1:-80638951 | None:intergenic |
| GTACAATGTGGAAGATGTTG+AGG | 0.633807 | 3.1:+80640363 | MS.gene48495:CDS |
| TTAGGGAGCTACATTAGTCA+AGG | 0.635109 | 3.1:+80638669 | MS.gene48495:CDS |
| TTGATGCTCAAATATATCTG+TGG | 0.635548 | 3.1:+80642083 | MS.gene48495:CDS |
| TGCTTCCAGTTACAACAACC+AGG | 0.635580 | 3.1:+80640474 | MS.gene48495:CDS |
| AGGATGGGAAGATTGTAGGA+AGG | 0.646789 | 3.1:+80639018 | MS.gene48495:CDS |
| AAACAATCACCAAGAGAGTG+TGG | 0.649865 | 3.1:-80640562 | None:intergenic |
| TAGAACGGATTGCAATCGGA+AGG | 0.650304 | 3.1:-80644532 | None:intergenic |
| AGAATGAATGATCGATACGA+GGG | 0.652534 | 3.1:+80640664 | MS.gene48495:CDS |
| CAAATATCAAATGCAGAAGG+GGG | 0.653360 | 3.1:-80645129 | None:intergenic |
| CTCAAGTGAGCAAACTCATG+AGG | 0.654134 | 3.1:+80639322 | MS.gene48495:CDS |
| GTGGTAGTGGAGAATGAGGA+TGG | 0.670297 | 3.1:+80639197 | MS.gene48495:CDS |
| GACCAGTCAACACCAACCAA+AGG | 0.670738 | 3.1:-80642843 | None:intergenic |
| TTGAACGACGACGATATCGA+CGG | 0.672004 | 3.1:-80638733 | None:intergenic |
| TGAGCCTAGTATGTACAATG+TGG | 0.685162 | 3.1:+80640351 | MS.gene48495:CDS |
| CTTCAGGGTACGGAAACTGA+GGG | 0.690661 | 3.1:+80640262 | MS.gene48495:intron |
| GTTCATTCAAATCATCACCA+TGG | 0.692552 | 3.1:+80638766 | MS.gene48495:CDS |
| CAATCACCAAGAGAGTGTGG+TGG | 0.694828 | 3.1:-80640559 | None:intergenic |
| TTAATTAGAGAGGATGCAAG+CGG | 0.696839 | 3.1:+80638638 | None:intergenic |
| TTTGGGAGAAGGTCTGTGAG+TGG | 0.698399 | 3.1:+80639077 | MS.gene48495:CDS |
| CTAGAAATGAGGATGCTGCG+GGG | 0.704073 | 3.1:+80640782 | MS.gene48495:CDS |
| TACCAGCTCTCTTACCAGGG+GGG | 0.707953 | 3.1:-80641035 | None:intergenic |
| TAGAGAGGATGCAAGCGGTG+GGG | 0.712708 | 3.1:+80638643 | None:intergenic |
| ATTATGTGATAATAACACGA+AGG | 0.713676 | 3.1:+80640507 | MS.gene48495:CDS |
| TCAAGATGGTGATCATGCTG+TGG | 0.730772 | 3.1:+80639178 | MS.gene48495:CDS |
| ACATAAGCAAACCTTGACTG+CGG | 0.730908 | 3.1:-80642892 | None:intergenic |
| GTCGTCGTTCAACAACAAGA+CGG | 0.732356 | 3.1:+80638744 | MS.gene48495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAAAAAAAAAAA+AGG | - | chr3.1:80644677-80644658 | None:intergenic | 0.0% |
| !! | TAACTTTATAATATTAATCT+TGG | + | chr3.1:80643755-80643774 | MS.gene48495:intron | 10.0% |
| !! | ATCTTCTTTATCTATATATT+CGG | - | chr3.1:80640701-80640720 | None:intergenic | 15.0% |
| !! | ATTATAGAAACATACATAAA+AGG | - | chr3.1:80642007-80642026 | None:intergenic | 15.0% |
| !! | TCAAATTTGATCAAATATTA+TGG | + | chr3.1:80642656-80642675 | MS.gene48495:intron | 15.0% |
| !! | TTATAGAAACATACATAAAA+GGG | - | chr3.1:80642006-80642025 | None:intergenic | 15.0% |
| !!! | ACTTATTTGAGATTATTTAA+TGG | + | chr3.1:80639452-80639471 | MS.gene48495:intron | 15.0% |
| !!! | TATTTTTTTCATTCATAACT+GGG | + | chr3.1:80644853-80644872 | MS.gene48495:intron | 15.0% |
| !!! | TTATTTTTTTCATTCATAAC+TGG | + | chr3.1:80644852-80644871 | MS.gene48495:intron | 15.0% |
| !!! | TTTGAATATTAAATAATGGA+AGG | - | chr3.1:80644881-80644900 | None:intergenic | 15.0% |
| !! | AAAATCTCAAACTAACAATT+TGG | + | chr3.1:80640402-80640421 | MS.gene48495:CDS | 20.0% |
| !! | AAATATTGAAGTTAACTTAG+GGG | - | chr3.1:80644137-80644156 | None:intergenic | 20.0% |
| !! | AATAAATAAATAATCTACCC+CGG | - | chr3.1:80644933-80644952 | None:intergenic | 20.0% |
| !! | ACAAATATTAGATTAAGACA+TGG | + | chr3.1:80641544-80641563 | MS.gene48495:intron | 20.0% |
| !! | ACAAATATTGAAGTTAACTT+AGG | - | chr3.1:80644139-80644158 | None:intergenic | 20.0% |
| !! | ACTGAAAATATGAAGAAAAA+AGG | - | chr3.1:80643790-80643809 | None:intergenic | 20.0% |
| !! | ACTGGTAGATATATAATATA+AGG | + | chr3.1:80644025-80644044 | MS.gene48495:intron | 20.0% |
| !! | CAAATATTGAAGTTAACTTA+GGG | - | chr3.1:80644138-80644157 | None:intergenic | 20.0% |
| !! | GATAACAAATTCATTTCTTT+AGG | + | chr3.1:80641445-80641464 | MS.gene48495:intron | 20.0% |
| !! | GATAATATTTCTTATGAGAA+TGG | + | chr3.1:80640718-80640737 | MS.gene48495:CDS | 20.0% |
| !! | TATTACCATAAATACTACTA+CGG | - | chr3.1:80642709-80642728 | None:intergenic | 20.0% |
| !! | TCTTCTTTATCTATATATTC+GGG | - | chr3.1:80640700-80640719 | None:intergenic | 20.0% |
| !! | TGTTATTATCACATAATTCT+CGG | - | chr3.1:80640504-80640523 | None:intergenic | 20.0% |
| !! | TTATGAAAATAAGCTGAAAA+GGG | - | chr3.1:80639523-80639542 | None:intergenic | 20.0% |
| !! | TTATTACCAGAAGAAATATT+TGG | - | chr3.1:80640835-80640854 | None:intergenic | 20.0% |
| !! | TTGATATATTGCCTTAATTA+CGG | + | chr3.1:80643875-80643894 | MS.gene48495:intron | 20.0% |
| !! | TTTCTTTCTCATTGTTAATT+TGG | + | chr3.1:80642244-80642263 | MS.gene48495:intron | 20.0% |
| !!! | AAATTGTTAGTTTGAGATTT+TGG | - | chr3.1:80640403-80640422 | None:intergenic | 20.0% |
| !!! | AATATATCTTTTTACATTGC+AGG | + | chr3.1:80643433-80643452 | MS.gene48495:intron | 20.0% |
| !!! | AGCTATATTTTATTTCATAG+AGG | - | chr3.1:80642378-80642397 | None:intergenic | 20.0% |
| !!! | ATTTGACTTAAAAGGTATAT+TGG | - | chr3.1:80642642-80642661 | None:intergenic | 20.0% |
| !!! | ATTTTAATTCATGGAATTTC+TGG | + | chr3.1:80645100-80645119 | MS.gene48495:CDS | 20.0% |
| !!! | CAATTAAAAATTTTCAACTG+AGG | - | chr3.1:80643211-80643230 | None:intergenic | 20.0% |
| !!! | CTTATTTTCATAAGTTCTTT+AGG | + | chr3.1:80639530-80639549 | MS.gene48495:intron | 20.0% |
| !!! | TGAAATTTTTCATGAGATTT+AGG | + | chr3.1:80641493-80641512 | MS.gene48495:intron | 20.0% |
| !!! | TTGATCAAATTTGACTTAAA+AGG | - | chr3.1:80642650-80642669 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATGTTTTAGCA+TGG | + | chr3.1:80643130-80643149 | MS.gene48495:intron | 20.0% |
| ! | AAAAAAGGATTTATTTACCC+TGG | - | chr3.1:80644641-80644660 | None:intergenic | 25.0% |
| ! | AAAAAGGATTTATTTACCCT+GGG | - | chr3.1:80644640-80644659 | None:intergenic | 25.0% |
| ! | AAAGTTCAAGATGTAGTATT+AGG | - | chr3.1:80643652-80643671 | None:intergenic | 25.0% |
| ! | AAATCTTCATTATAAATCCC+AGG | + | chr3.1:80644620-80644639 | MS.gene48495:CDS | 25.0% |
| ! | AATAAGATTTATTGCCTTCA+CGG | - | chr3.1:80643523-80643542 | None:intergenic | 25.0% |
| ! | AATATTAGATTAAGACATGG+TGG | + | chr3.1:80641547-80641566 | MS.gene48495:intron | 25.0% |
| ! | AATCATGATTATTGTGAAGT+TGG | + | chr3.1:80642592-80642611 | MS.gene48495:intron | 25.0% |
| ! | AATCTTCATTATAAATCCCA+GGG | + | chr3.1:80644621-80644640 | MS.gene48495:CDS | 25.0% |
| ! | ACTGAATTAGTAACAATCTA+TGG | + | chr3.1:80641095-80641114 | MS.gene48495:intron | 25.0% |
| ! | ACTGTATATACTGTATTCTA+TGG | + | chr3.1:80641128-80641147 | MS.gene48495:intron | 25.0% |
| ! | ATATCATCAACAGATTCTAA+CGG | - | chr3.1:80638954-80638973 | None:intergenic | 25.0% |
| ! | ATGATAAGAATTTAAAAGCC+AGG | - | chr3.1:80643096-80643115 | None:intergenic | 25.0% |
| ! | ATTATGTGATAATAACACGA+AGG | + | chr3.1:80640507-80640526 | MS.gene48495:CDS | 25.0% |
| ! | ATTCAAAATAAATAGCATGC+TGG | + | chr3.1:80644894-80644913 | MS.gene48495:intron | 25.0% |
| ! | ATTTAGTGAAAAAGAAGGTT+AGG | + | chr3.1:80641831-80641850 | MS.gene48495:CDS | 25.0% |
| ! | CAAACTAACAATTTGGATAT+AGG | + | chr3.1:80640409-80640428 | MS.gene48495:CDS | 25.0% |
| ! | CAATATTTGTTTAAGCTTCA+AGG | + | chr3.1:80644149-80644168 | MS.gene48495:intron | 25.0% |
| ! | CATTTAAGTGCTTATGTATA+AGG | - | chr3.1:80639628-80639647 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | - | chr3.1:80639524-80639543 | None:intergenic | 25.0% |
| ! | CTTCTTTATCTATATATTCG+GGG | - | chr3.1:80640699-80640718 | None:intergenic | 25.0% |
| ! | GCTTATAGCATGTATTAAAA+TGG | + | chr3.1:80639569-80639588 | MS.gene48495:intron | 25.0% |
| ! | TAGAGTAAAATTAAGCATCT+GGG | + | chr3.1:80643910-80643929 | MS.gene48495:intron | 25.0% |
| ! | TCTCATAACATGTAAATACA+TGG | - | chr3.1:80642921-80642940 | None:intergenic | 25.0% |
| ! | TGATATATTGCCTTAATTAC+GGG | + | chr3.1:80643876-80643895 | MS.gene48495:intron | 25.0% |
| ! | TGTAAGTTTCACTAAAGATT+TGG | + | chr3.1:80641185-80641204 | MS.gene48495:intron | 25.0% |
| ! | TTAGAGTAAAATTAAGCATC+TGG | + | chr3.1:80643909-80643928 | MS.gene48495:intron | 25.0% |
| ! | TTCTTTATCTATATATTCGG+GGG | - | chr3.1:80640698-80640717 | None:intergenic | 25.0% |
| ! | TTGCAATTTATTTGCATTCA+GGG | - | chr3.1:80639860-80639879 | None:intergenic | 25.0% |
| ! | TTTAGTGAAAAAGAAGGTTA+GGG | + | chr3.1:80641832-80641851 | MS.gene48495:CDS | 25.0% |
| ! | TTTGCAATTTATTTGCATTC+AGG | - | chr3.1:80639861-80639880 | None:intergenic | 25.0% |
| !! | AACGTAAACCTACATAATTT+TGG | + | chr3.1:80644313-80644332 | MS.gene48495:intron | 25.0% |
| !! | ACTTTTCTTACATGATTCAT+TGG | + | chr3.1:80643667-80643686 | MS.gene48495:intron | 25.0% |
| !! | ATAATGAAGATTTTTCCCAA+CGG | - | chr3.1:80644613-80644632 | None:intergenic | 25.0% |
| !! | CAAATGTATCTTGATAACAA+AGG | + | chr3.1:80638876-80638895 | MS.gene48495:CDS | 25.0% |
| !! | CATATTTTCAGTCATTAGAA+GGG | + | chr3.1:80643798-80643817 | MS.gene48495:intron | 25.0% |
| !! | CTTAAAAGGTATATTGGTTA+TGG | - | chr3.1:80642636-80642655 | None:intergenic | 25.0% |
| !! | CTTGAAATTTTACATCCAAT+TGG | - | chr3.1:80642543-80642562 | None:intergenic | 25.0% |
| !! | TATTAGACACTACTATTTTG+AGG | + | chr3.1:80643584-80643603 | MS.gene48495:intron | 25.0% |
| !! | TCATATTTTCAGTCATTAGA+AGG | + | chr3.1:80643797-80643816 | MS.gene48495:intron | 25.0% |
| !!! | AAACCACAAAATTTTTTACC+TGG | + | chr3.1:80643075-80643094 | MS.gene48495:intron | 25.0% |
| !!! | AACCTTCTTTTTCACTAAAT+TGG | - | chr3.1:80641831-80641850 | None:intergenic | 25.0% |
| !!! | ACCTTCTTTTTCACTAAATT+GGG | - | chr3.1:80641830-80641849 | None:intergenic | 25.0% |
| !!! | ATTGCACTATTGATAGTTTT+TGG | + | chr3.1:80642992-80643011 | MS.gene48495:intron | 25.0% |
| !!! | CGTTTCACTTTTAATTTGTT+CGG | - | chr3.1:80644297-80644316 | None:intergenic | 25.0% |
| !!! | GATTTGAACGATTTTTTCTT+TGG | - | chr3.1:80638829-80638848 | None:intergenic | 25.0% |
| !!! | TAAAACTTTAAGACCTTGTT+TGG | - | chr3.1:80639692-80639711 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTTCAAAACCT+TGG | + | chr3.1:80640122-80640141 | MS.gene48495:intron | 25.0% |
| !!! | TTGCACTATTGATAGTTTTT+GGG | + | chr3.1:80642993-80643012 | MS.gene48495:intron | 25.0% |
| !!! | TTTTAAAAAGTCTCTAACTC+TGG | + | chr3.1:80642754-80642773 | MS.gene48495:intron | 25.0% |
| AAACAAAGGAGACATTACAA+TGG | - | chr3.1:80641068-80641087 | None:intergenic | 30.0% | |
| AAAGTGAGAATCTATCTTTC+TGG | + | chr3.1:80642153-80642172 | MS.gene48495:intron | 30.0% | |
| AAATAATCACATGCACTAGA+TGG | - | chr3.1:80644197-80644216 | None:intergenic | 30.0% | |
| AAATTCATTTCTTTAGGCCT+GGG | + | chr3.1:80641451-80641470 | MS.gene48495:intron | 30.0% | |
| AACCATCAATAGTGCAATAA+TGG | - | chr3.1:80643042-80643061 | None:intergenic | 30.0% | |
| ACCATCAATAGTGCAATAAT+GGG | - | chr3.1:80643041-80643060 | None:intergenic | 30.0% | |
| ACCCAATTTAGTGAAAAAGA+AGG | + | chr3.1:80641826-80641845 | MS.gene48495:CDS | 30.0% | |
| AGAGTAAAATTAAGCATCTG+GGG | + | chr3.1:80643911-80643930 | MS.gene48495:intron | 30.0% | |
| ATATGTTGAAATTCTCCTTC+AGG | + | chr3.1:80640246-80640265 | MS.gene48495:intron | 30.0% | |
| ATATTGACCATCAATCTTTG+AGG | + | chr3.1:80638970-80638989 | MS.gene48495:CDS | 30.0% | |
| ATCAACAAAGCAACTACATA+AGG | - | chr3.1:80641332-80641351 | None:intergenic | 30.0% | |
| ATCATTGTTCAGCAAGATTA+AGG | - | chr3.1:80645071-80645090 | None:intergenic | 30.0% | |
| ATTCAAAATTGCATGCTTAG+AGG | + | chr3.1:80643831-80643850 | MS.gene48495:CDS | 30.0% | |
| ATTCAGAGTTTATATCACAC+AGG | - | chr3.1:80644973-80644992 | None:intergenic | 30.0% | |
| ATTCAGTTGACAGAAAACAA+AGG | - | chr3.1:80641082-80641101 | None:intergenic | 30.0% | |
| ATTCCTACTGAATCTTAAAC+AGG | + | chr3.1:80643325-80643344 | MS.gene48495:CDS | 30.0% | |
| CAAAATCGAACTTATGTAAC+TGG | + | chr3.1:80644007-80644026 | MS.gene48495:intron | 30.0% | |
| CGTAAAACAATCACTATAGA+CGG | - | chr3.1:80643177-80643196 | None:intergenic | 30.0% | |
| CTCAAATATATCTGTGGAAA+TGG | + | chr3.1:80642089-80642108 | MS.gene48495:CDS | 30.0% | |
| CTGAAAATTGTTCAAACTTC+TGG | - | chr3.1:80644450-80644469 | None:intergenic | 30.0% | |
| CTTAATATCCAACAAATTCG+CGG | - | chr3.1:80639147-80639166 | None:intergenic | 30.0% | |
| GAATTTCAACATATGAGTGT+TGG | - | chr3.1:80640240-80640259 | None:intergenic | 30.0% | |
| GATAAATATATGTAGAGCAC+TGG | + | chr3.1:80643610-80643629 | MS.gene48495:intron | 30.0% | |
| GTAAAACAATCACTATAGAC+GGG | - | chr3.1:80643176-80643195 | None:intergenic | 30.0% | |
| GTGAGATATGATATTCATCA+TGG | + | chr3.1:80643709-80643728 | MS.gene48495:intron | 30.0% | |
| TAAAACAATCACTATAGACG+GGG | - | chr3.1:80643175-80643194 | None:intergenic | 30.0% | |
| TAAGGCAATATATCAACAAG+TGG | - | chr3.1:80643871-80643890 | None:intergenic | 30.0% | |
| TAGGAATTGTCGTGTAATAT+AGG | - | chr3.1:80643312-80643331 | None:intergenic | 30.0% | |
| TATAGTCTATGACTGCATTT+AGG | - | chr3.1:80639779-80639798 | None:intergenic | 30.0% | |
| TATGTTGAAATTCTCCTTCA+GGG | + | chr3.1:80640247-80640266 | MS.gene48495:intron | 30.0% | |
| TCAAATATCAAATGCAGAAG+GGG | - | chr3.1:80645133-80645152 | None:intergenic | 30.0% | |
| TCCTTGAATATAAGTTTGTC+AGG | + | chr3.1:80644690-80644709 | MS.gene48495:intron | 30.0% | |
| TGATGAAATCAGTTACCTTA+AGG | + | chr3.1:80644579-80644598 | MS.gene48495:CDS | 30.0% | |
| TGATTATAACAGACCAAACA+AGG | - | chr3.1:80642577-80642596 | None:intergenic | 30.0% | |
| TGCAAGCTTAAACATAAGAA+AGG | - | chr3.1:80644716-80644735 | None:intergenic | 30.0% | |
| TGTCAAAGATAGTTGTTTGA+TGG | - | chr3.1:80639720-80639739 | None:intergenic | 30.0% | |
| TTAATAGTGCGTAACAGTTT+AGG | + | chr3.1:80642493-80642512 | MS.gene48495:intron | 30.0% | |
| TTCAGAATCTTGATAAGCTT+TGG | - | chr3.1:80640989-80641008 | None:intergenic | 30.0% | |
| TTCTTATGTTTAAGCTTGCA+GGG | + | chr3.1:80644716-80644735 | MS.gene48495:intron | 30.0% | |
| TTGATGCTCAAATATATCTG+TGG | + | chr3.1:80642083-80642102 | MS.gene48495:CDS | 30.0% | |
| TTTCATGAGATTTAGGAACT+AGG | + | chr3.1:80641500-80641519 | MS.gene48495:intron | 30.0% | |
| TTTCTTATGTTTAAGCTTGC+AGG | + | chr3.1:80644715-80644734 | MS.gene48495:intron | 30.0% | |
| ! | AAAACAGATTAGACTTTTGC+TGG | - | chr3.1:80640209-80640228 | None:intergenic | 30.0% |
| ! | AACAACAGATGTATTGACAA+AGG | - | chr3.1:80642732-80642751 | None:intergenic | 30.0% |
| ! | AACAATTTTCAGCATGATCA+TGG | + | chr3.1:80644458-80644477 | MS.gene48495:intron | 30.0% |
| ! | AAGCCAGGTAAAAAATTTTG+TGG | - | chr3.1:80643081-80643100 | None:intergenic | 30.0% |
| ! | AGCAAAAGTCTAATCTGTTT+TGG | + | chr3.1:80640208-80640227 | MS.gene48495:intron | 30.0% |
| ! | ATGATTTTGTGTCAAGACTT+CGG | - | chr3.1:80644757-80644776 | None:intergenic | 30.0% |
| ! | ATTGCCAAAAAGATCACTTT+TGG | - | chr3.1:80641759-80641778 | None:intergenic | 30.0% |
| ! | CAAATATCTTCAGGTATTGT+CGG | - | chr3.1:80642272-80642291 | None:intergenic | 30.0% |
| ! | CATGCAATTTTGAATTCATG+AGG | - | chr3.1:80643826-80643845 | None:intergenic | 30.0% |
| ! | GAAATTTTACATCCAATTGG+TGG | - | chr3.1:80642540-80642559 | None:intergenic | 30.0% |
| ! | TAATGAAGATTTTTCCCAAC+GGG | - | chr3.1:80644612-80644631 | None:intergenic | 30.0% |
| ! | TATCTTTTTACATTGCAGGA+TGG | + | chr3.1:80643437-80643456 | MS.gene48495:intron | 30.0% |
| ! | TCATTTCTAGGGATAACTAT+GGG | - | chr3.1:80640772-80640791 | None:intergenic | 30.0% |
| ! | TGTAAAATTTCAAGTAGACG+AGG | + | chr3.1:80642549-80642568 | MS.gene48495:intron | 30.0% |
| ! | TTTTCCTTTAAGTCAATCAC+TGG | + | chr3.1:80640876-80640895 | MS.gene48495:CDS | 30.0% |
| !! | AACCTACATAATTTTGGAAG+TGG | + | chr3.1:80644319-80644338 | MS.gene48495:intron | 30.0% |
| !! | ACCTACATAATTTTGGAAGT+GGG | + | chr3.1:80644320-80644339 | MS.gene48495:intron | 30.0% |
| !! | CGAATTTGTTGGATATTAAG+TGG | + | chr3.1:80639147-80639166 | MS.gene48495:CDS | 30.0% |
| !! | GAATACTTGGTCTTATGTTT+GGG | + | chr3.1:80639060-80639079 | MS.gene48495:CDS | 30.0% |
| !! | TAAGTTGTTTTGTCCAAACA+AGG | + | chr3.1:80639676-80639695 | MS.gene48495:intron | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+AGG | - | chr3.1:80639442-80639461 | None:intergenic | 30.0% |
| !! | TGCTATAAGCTGTTTTCATA+AGG | - | chr3.1:80639559-80639578 | None:intergenic | 30.0% |
| !! | TTACGTTTGATTTGATCAAC+AGG | + | chr3.1:80642060-80642079 | MS.gene48495:intron | 30.0% |
| !!! | AGTATTTTGGTAGAGCAAAA+TGG | + | chr3.1:80641257-80641276 | MS.gene48495:intron | 30.0% |
| !!! | CATGATTTTGTTTTCCAACT+TGG | - | chr3.1:80641625-80641644 | None:intergenic | 30.0% |
| !!! | CTTTGGATTTTAAAACACCT+TGG | - | chr3.1:80638812-80638831 | None:intergenic | 30.0% |
| !!! | TTGATAGTTTTTGGGTAATG+TGG | + | chr3.1:80643001-80643020 | MS.gene48495:intron | 30.0% |
| !!! | TTTTGTGGTTTTAACAGACA+CGG | - | chr3.1:80643066-80643085 | None:intergenic | 30.0% |
| !!! | TTTTTTCAAAACCTTGGTCA+TGG | + | chr3.1:80640128-80640147 | MS.gene48495:intron | 30.0% |
| !!! | TTTTTTGTTTCATGTCCTAC+AGG | + | chr3.1:80642796-80642815 | MS.gene48495:intron | 30.0% |
| AATGTATGATCAGTGCATTC+AGG | - | chr3.1:80642972-80642991 | None:intergenic | 35.0% | |
| AATTCATTTCTTTAGGCCTG+GGG | + | chr3.1:80641452-80641471 | MS.gene48495:intron | 35.0% | |
| ACCAACAAAGTCTACATTCA+GGG | + | chr3.1:80639993-80640012 | MS.gene48495:intron | 35.0% | |
| ACCAGAAGAAATATTTGGCA+AGG | - | chr3.1:80640830-80640849 | None:intergenic | 35.0% | |
| ACGCAAGTGAATGAAAAGAA+AGG | - | chr3.1:80642450-80642469 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr3.1:80639889-80639908 | None:intergenic | 35.0% | |
| AGAATGAATGATCGATACGA+GGG | + | chr3.1:80640664-80640683 | MS.gene48495:CDS | 35.0% | |
| AGACTTTGTTGGTCAATTTC+AGG | - | chr3.1:80639986-80640005 | None:intergenic | 35.0% | |
| AGGTTATGTATCTTGCTCAT+GGG | + | chr3.1:80639342-80639361 | MS.gene48495:CDS | 35.0% | |
| AGTCATAGACTATAGAGAGA+CGG | + | chr3.1:80639785-80639804 | MS.gene48495:intron | 35.0% | |
| AGTGCAAGTTTGATACAATG+AGG | + | chr3.1:80645017-80645036 | MS.gene48495:intron | 35.0% | |
| ATATATCAACAAGTGGAAGC+TGG | - | chr3.1:80643864-80643883 | None:intergenic | 35.0% | |
| ATGAGCCGTAGTAGTATTTA+TGG | + | chr3.1:80642701-80642720 | MS.gene48495:intron | 35.0% | |
| ATGATAAGTGCTTGTGTTGT+TGG | + | chr3.1:80639645-80639664 | MS.gene48495:intron | 35.0% | |
| ATTCAACGATGCTATCTGTT+CGG | - | chr3.1:80641873-80641892 | None:intergenic | 35.0% | |
| ATTCAGCAATGAAATTGCAG+AGG | - | chr3.1:80642316-80642335 | None:intergenic | 35.0% | |
| ATTTCTCATTTGCAGGAGAA+TGG | + | chr3.1:80643245-80643264 | MS.gene48495:intron | 35.0% | |
| CAAATATCAAATGCAGAAGG+GGG | - | chr3.1:80645132-80645151 | None:intergenic | 35.0% | |
| CAAATTCATTTCTTTAGGCC+TGG | + | chr3.1:80641450-80641469 | MS.gene48495:intron | 35.0% | |
| CATAGCTGTAGAAAAAGTGA+AGG | - | chr3.1:80641921-80641940 | None:intergenic | 35.0% | |
| CATAGTTATCCCTAGAAATG+AGG | + | chr3.1:80640771-80640790 | MS.gene48495:CDS | 35.0% | |
| CGACAATACCTGAAGATATT+TGG | + | chr3.1:80642270-80642289 | MS.gene48495:intron | 35.0% | |
| CGTCTAAGTTTAAGCATTTC+AGG | - | chr3.1:80640927-80640946 | None:intergenic | 35.0% | |
| CTCATGTATGTAGCATTACT+TGG | - | chr3.1:80644098-80644117 | None:intergenic | 35.0% | |
| CTCATTTACACCCGTAATTA+AGG | - | chr3.1:80643889-80643908 | None:intergenic | 35.0% | |
| GAAAAAGAGACTTGATACTC+TGG | - | chr3.1:80644513-80644532 | None:intergenic | 35.0% | |
| GAAATCAGTTACCTTAAGGT+TGG | + | chr3.1:80644583-80644602 | MS.gene48495:CDS | 35.0% | |
| GACATTCATTGCAGAAAATC+TGG | + | chr3.1:80641420-80641439 | MS.gene48495:intron | 35.0% | |
| GACGACTCATTTCATATTCA+GGG | - | chr3.1:80639829-80639848 | None:intergenic | 35.0% | |
| GACTTTGTTGGTCAATTTCA+GGG | - | chr3.1:80639985-80640004 | None:intergenic | 35.0% | |
| GATTAAGGACAACAATGTGT+TGG | - | chr3.1:80645056-80645075 | None:intergenic | 35.0% | |
| GCCTGACAAACTTATATTCA+AGG | - | chr3.1:80644694-80644713 | None:intergenic | 35.0% | |
| GTATGTAGCATTACTTGGAA+AGG | - | chr3.1:80644093-80644112 | None:intergenic | 35.0% | |
| GTGAATTTGAAGATGGTGTT+GGG | + | chr3.1:80639099-80639118 | MS.gene48495:CDS | 35.0% | |
| GTTAGACACCAAATATCTTC+AGG | - | chr3.1:80642281-80642300 | None:intergenic | 35.0% | |
| GTTCATTCAAATCATCACCA+TGG | + | chr3.1:80638766-80638785 | MS.gene48495:CDS | 35.0% | |
| GTTGGAAAACAAAATCATGC+AGG | + | chr3.1:80641626-80641645 | MS.gene48495:intron | 35.0% | |
| GTTTACCTAGTGAAACATCA+AGG | + | chr3.1:80640581-80640600 | MS.gene48495:CDS | 35.0% | |
| TCAATTAAACTCCATGACCA+AGG | - | chr3.1:80640142-80640161 | None:intergenic | 35.0% | |
| TCACTCACACATAAACAGAA+AGG | - | chr3.1:80643955-80643974 | None:intergenic | 35.0% | |
| TCACTGATCCATCAATTCAA+TGG | - | chr3.1:80643693-80643712 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr3.1:80639936-80639955 | None:intergenic | 35.0% | |
| TCCCACTTCCAAAATTATGT+AGG | - | chr3.1:80644324-80644343 | None:intergenic | 35.0% | |
| TCCTTGCCAAATATTTCTTC+TGG | + | chr3.1:80640826-80640845 | MS.gene48495:CDS | 35.0% | |
| TCTGCAATTTCATTGCTGAA+TGG | + | chr3.1:80642315-80642334 | MS.gene48495:intron | 35.0% | |
| TCTGTGCAAATCTTATTCTC+TGG | - | chr3.1:80641785-80641804 | None:intergenic | 35.0% | |
| TCTTAGTCCTCAAAGATTGA+TGG | - | chr3.1:80638980-80638999 | None:intergenic | 35.0% | |
| TCTTCCACATTGTACATACT+AGG | - | chr3.1:80640358-80640377 | None:intergenic | 35.0% | |
| TGACGACTCATTTCATATTC+AGG | - | chr3.1:80639830-80639849 | None:intergenic | 35.0% | |
| TTAAAGGAAAACGAACGTGT+TGG | - | chr3.1:80640867-80640886 | None:intergenic | 35.0% | |
| TTCATTGGCCATTGAATTGA+TGG | + | chr3.1:80643682-80643701 | MS.gene48495:intron | 35.0% | |
| TTCTGTTTATGTGTGAGTGA+TGG | + | chr3.1:80643955-80643974 | MS.gene48495:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr3.1:80640022-80640041 | MS.gene48495:intron | 35.0% | |
| TTTAAGTCAATCACTGGACT+CGG | + | chr3.1:80640882-80640901 | MS.gene48495:CDS | 35.0% | |
| TTTCCAAAACCAGCATAGAA+CGG | - | chr3.1:80644550-80644569 | None:intergenic | 35.0% | |
| TTTCGTCAAGGTCACTAAAA+AGG | - | chr3.1:80640642-80640661 | None:intergenic | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr3.1:80640021-80640040 | MS.gene48495:intron | 35.0% | |
| TTTGGGTAATGTGGTTAATC+TGG | + | chr3.1:80643010-80643029 | MS.gene48495:intron | 35.0% | |
| ! | CATTCATTCTGTTTTCGTCA+AGG | - | chr3.1:80640654-80640673 | None:intergenic | 35.0% |
| ! | CTCATTTCTAGGGATAACTA+TGG | - | chr3.1:80640773-80640792 | None:intergenic | 35.0% |
| ! | GAGACATGTGTCAAGTATTT+TGG | + | chr3.1:80641244-80641263 | MS.gene48495:intron | 35.0% |
| ! | GATGCCAAAAGTGATCTTTT+TGG | + | chr3.1:80641752-80641771 | MS.gene48495:CDS | 35.0% |
| ! | TAAAATTAAGCATCTGGGGT+CGG | + | chr3.1:80643915-80643934 | MS.gene48495:intron | 35.0% |
| ! | TCACCTGTTTAAGATTCAGT+AGG | - | chr3.1:80643331-80643350 | None:intergenic | 35.0% |
| ! | TCATAGTCTTAAGACCTGTT+TGG | + | chr3.1:80639425-80639444 | MS.gene48495:intron | 35.0% |
| ! | TTTCCAGGAAGCATATTTCA+AGG | - | chr3.1:80641304-80641323 | None:intergenic | 35.0% |
| ! | TTTTGGTAGAGCAAAATGGA+AGG | + | chr3.1:80641261-80641280 | MS.gene48495:intron | 35.0% |
| !! | ACATAACACTTGCTGTATGA+AGG | + | chr3.1:80641374-80641393 | MS.gene48495:intron | 35.0% |
| !! | ACTTTTTCTACAGCTATGCT+GGG | + | chr3.1:80641923-80641942 | MS.gene48495:CDS | 35.0% |
| !! | AGATCACTTTTGGCATCATT+TGG | - | chr3.1:80641749-80641768 | None:intergenic | 35.0% |
| !! | CATAACACTTGCTGTATGAA+GGG | + | chr3.1:80641375-80641394 | MS.gene48495:intron | 35.0% |
| !! | CGAATACTTGGTCTTATGTT+TGG | + | chr3.1:80639059-80639078 | MS.gene48495:CDS | 35.0% |
| !! | CTACTACATGCTTTAGTTTG+CGG | + | chr3.1:80641222-80641241 | MS.gene48495:intron | 35.0% |
| !! | CTTTTGGCATCATTTGGAAT+AGG | - | chr3.1:80641743-80641762 | None:intergenic | 35.0% |
| !! | GAGATTTTGGAGATGTTGTT+AGG | - | chr3.1:80640390-80640409 | None:intergenic | 35.0% |
| !! | TGGTTCTATTGGTGTTGTAA+AGG | + | chr3.1:80639217-80639236 | MS.gene48495:CDS | 35.0% |
| !!! | CTATGCTGGTTTTGGAAATA+GGG | + | chr3.1:80644552-80644571 | MS.gene48495:CDS | 35.0% |
| !!! | GAGTTGTAATTTTGATTCCG+AGG | + | chr3.1:80638998-80639017 | MS.gene48495:CDS | 35.0% |
| !!! | GTAATTTTGATTCCGAGGAT+GGG | + | chr3.1:80639003-80639022 | MS.gene48495:CDS | 35.0% |
| !!! | TCTATGCTGGTTTTGGAAAT+AGG | + | chr3.1:80644551-80644570 | MS.gene48495:CDS | 35.0% |
| !!! | TGCAGGAGGATTTTAATTCA+TGG | + | chr3.1:80645091-80645110 | MS.gene48495:intron | 35.0% |
| !!! | TGTAATTTTGATTCCGAGGA+TGG | + | chr3.1:80639002-80639021 | MS.gene48495:CDS | 35.0% |
| AAAAGTCTCTAACTCTGGTG+TGG | + | chr3.1:80642759-80642778 | MS.gene48495:intron | 40.0% | |
| AAACAATCACCAAGAGAGTG+TGG | - | chr3.1:80640565-80640584 | None:intergenic | 40.0% | |
| AACAAGTACATTATACCCCC+AGG | - | chr3.1:80641471-80641490 | None:intergenic | 40.0% | |
| AACTTGATCTGACGATATGC+TGG | + | chr3.1:80642195-80642214 | MS.gene48495:intron | 40.0% | |
| AAGCACTCGTAAGACTGTTT+AGG | + | chr3.1:80639478-80639497 | MS.gene48495:intron | 40.0% | |
| AAGTGGTCTACGAATCAAGA+TGG | + | chr3.1:80639164-80639183 | MS.gene48495:CDS | 40.0% | |
| AATAAATAGCATGCTGGTCG+TGG | + | chr3.1:80644900-80644919 | MS.gene48495:intron | 40.0% | |
| AATCATCACCATGGTACGTT+CGG | + | chr3.1:80638775-80638794 | MS.gene48495:CDS | 40.0% | |
| AATTCCCCATAGAGAGACAT+AGG | + | chr3.1:80640088-80640107 | MS.gene48495:intron | 40.0% | |
| ACATAAGCAAACCTTGACTG+CGG | - | chr3.1:80642895-80642914 | None:intergenic | 40.0% | |
| ACGATTCCTATGTCTCTCTA+TGG | - | chr3.1:80640097-80640116 | None:intergenic | 40.0% | |
| ATAAATAGCATGCTGGTCGT+GGG | + | chr3.1:80644901-80644920 | MS.gene48495:intron | 40.0% | |
| ATACGAGTGAATGCAAGACT+TGG | - | chr3.1:80639394-80639413 | None:intergenic | 40.0% | |
| ATCATAGCTGTTGACCAAGT+TGG | + | chr3.1:80641608-80641627 | MS.gene48495:intron | 40.0% | |
| ATTCATTTCTTTAGGCCTGG+GGG | + | chr3.1:80641453-80641472 | MS.gene48495:intron | 40.0% | |
| CACTAAGAATGCTGATGTAG+TGG | + | chr3.1:80640288-80640307 | MS.gene48495:CDS | 40.0% | |
| CAGAATGAATGATCGATACG+AGG | + | chr3.1:80640663-80640682 | MS.gene48495:CDS | 40.0% | |
| CGATTCCTATGTCTCTCTAT+GGG | - | chr3.1:80640096-80640115 | None:intergenic | 40.0% | |
| CTACATAAGGCTGTATTTCC+AGG | - | chr3.1:80641319-80641338 | None:intergenic | 40.0% | |
| CTGCAAATGAGAAATCGACA+AGG | - | chr3.1:80643240-80643259 | None:intergenic | 40.0% | |
| CTTGACTGCGGAGAATAAAT+GGG | - | chr3.1:80642883-80642902 | None:intergenic | 40.0% | |
| GAATGATCGTATCGTGATCT+CGG | + | chr3.1:80642111-80642130 | MS.gene48495:CDS | 40.0% | |
| GACCAACAAAGTCTACATTC+AGG | + | chr3.1:80639992-80640011 | MS.gene48495:intron | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr3.1:80639890-80639909 | None:intergenic | 40.0% | |
| GAGGTTATGTATCTTGCTCA+TGG | + | chr3.1:80639341-80639360 | MS.gene48495:CDS | 40.0% | |
| GATCTCCTTGATGTTTCACT+AGG | - | chr3.1:80640589-80640608 | None:intergenic | 40.0% | |
| GATTCCTATGTCTCTCTATG+GGG | - | chr3.1:80640095-80640114 | None:intergenic | 40.0% | |
| GCCCATTATTGCACTATTGA+TGG | + | chr3.1:80643037-80643056 | MS.gene48495:intron | 40.0% | |
| GGAAAACAAAATCATGCAGG+TGG | + | chr3.1:80641629-80641648 | MS.gene48495:intron | 40.0% | |
| GGTGAATTTGAAGATGGTGT+TGG | + | chr3.1:80639098-80639117 | MS.gene48495:CDS | 40.0% | |
| GGTTATGTATCTTGCTCATG+GGG | + | chr3.1:80639343-80639362 | MS.gene48495:CDS | 40.0% | |
| GTACAATGTGGAAGATGTTG+AGG | + | chr3.1:80640363-80640382 | MS.gene48495:CDS | 40.0% | |
| GTACCTTGAAATATGCTTCC+TGG | + | chr3.1:80641298-80641317 | MS.gene48495:intron | 40.0% | |
| GTCATAGACTATAGAGAGAC+GGG | + | chr3.1:80639786-80639805 | MS.gene48495:intron | 40.0% | |
| GTGAGTGGTGAATTTGAAGA+TGG | + | chr3.1:80639092-80639111 | MS.gene48495:CDS | 40.0% | |
| TAAGAATGCTGATGTAGTGG+AGG | + | chr3.1:80640291-80640310 | MS.gene48495:CDS | 40.0% | |
| TAGAGAGGGAAAAAGTCCAT+CGG | - | chr3.1:80643498-80643517 | None:intergenic | 40.0% | |
| TAGTGCGTAACAGTTTAGGT+TGG | + | chr3.1:80642497-80642516 | MS.gene48495:intron | 40.0% | |
| TCAACAAGCAACTCTTCATC+TGG | + | chr3.1:80641656-80641675 | MS.gene48495:CDS | 40.0% | |
| TCCCTGAATGTAGACTTTGT+TGG | - | chr3.1:80639997-80640016 | None:intergenic | 40.0% | |
| TCTTGCTGAACAATGATTGC+AGG | + | chr3.1:80645074-80645093 | MS.gene48495:intron | 40.0% | |
| TGAAATTCTCCTTCAGGGTA+CGG | + | chr3.1:80640252-80640271 | MS.gene48495:intron | 40.0% | |
| TGAGATTTAGGAACTAGGCA+TGG | + | chr3.1:80641505-80641524 | MS.gene48495:intron | 40.0% | |
| TGAGCCTAGTATGTACAATG+TGG | + | chr3.1:80640351-80640370 | MS.gene48495:CDS | 40.0% | |
| TTAGGGAGCTACATTAGTCA+AGG | + | chr3.1:80638669-80638688 | MS.gene48495:CDS | 40.0% | |
| TTATACCAGCTCTCTTACCA+GGG | - | chr3.1:80641041-80641060 | None:intergenic | 40.0% | |
| TTTATACCAGCTCTCTTACC+AGG | - | chr3.1:80641042-80641061 | None:intergenic | 40.0% | |
| ! | AGTGCGTAACAGTTTAGGTT+GGG | + | chr3.1:80642498-80642517 | MS.gene48495:intron | 40.0% |
| ! | CATCGTTGAATCTGAAGCAA+GGG | + | chr3.1:80641882-80641901 | MS.gene48495:CDS | 40.0% |
| ! | CTTTTTCTACAGCTATGCTG+GGG | + | chr3.1:80641924-80641943 | MS.gene48495:CDS | 40.0% |
| ! | GAGAATGAGGATGGTTCTAT+TGG | + | chr3.1:80639206-80639225 | MS.gene48495:CDS | 40.0% |
| ! | GAGTCCAGTGATTGACTTAA+AGG | - | chr3.1:80640883-80640902 | None:intergenic | 40.0% |
| ! | GATGGCAAAGTTTTACCAGA+GGG | + | chr3.1:80643455-80643474 | MS.gene48495:CDS | 40.0% |
| ! | GGTCTTTGAGTTTCATTCTC+AGG | + | chr3.1:80640312-80640331 | MS.gene48495:CDS | 40.0% |
| ! | GTTGTTGTAACTGGAAGCAT+TGG | - | chr3.1:80640473-80640492 | None:intergenic | 40.0% |
| ! | TCTTTTCATTCACTTGCGTC+AGG | + | chr3.1:80642451-80642470 | MS.gene48495:intron | 40.0% |
| ! | TTGGCATCATTTGGAATAGG+TGG | - | chr3.1:80641740-80641759 | None:intergenic | 40.0% |
| !! | AGCATAGAACGGATTGCAAT+CGG | - | chr3.1:80644539-80644558 | None:intergenic | 40.0% |
| !! | CTTGTCGATTTCTCATTTGC+AGG | + | chr3.1:80643238-80643257 | MS.gene48495:intron | 40.0% |
| !! | GGAAGCATTGGTAACACAAT+AGG | - | chr3.1:80640461-80640480 | None:intergenic | 40.0% |
| !! | GTTCGGTTTGGTAAATTCCA+AGG | + | chr3.1:80638792-80638811 | MS.gene48495:CDS | 40.0% |
| !! | TAAACAGAAAGGCATTCACC+TGG | - | chr3.1:80643944-80643963 | None:intergenic | 40.0% |
| !! | TTAGGGGATTGACTTGTGAA+TGG | - | chr3.1:80644121-80644140 | None:intergenic | 40.0% |
| !! | TTGGTCTTATGTTTGGGAGA+AGG | + | chr3.1:80639066-80639085 | MS.gene48495:CDS | 40.0% |
| !!! | AATCCGTTCTATGCTGGTTT+TGG | + | chr3.1:80644544-80644563 | MS.gene48495:CDS | 40.0% |
| !!! | CACTTTTTCTACAGCTATGC+TGG | + | chr3.1:80641922-80641941 | MS.gene48495:CDS | 40.0% |
| !!! | GAACTAGGCATGGTGTTTTT+TGG | + | chr3.1:80641515-80641534 | MS.gene48495:intron | 40.0% |
| AAAGCAGTTACTGCATGAGC+AGG | + | chr3.1:80640957-80640976 | MS.gene48495:CDS | 45.0% | |
| ACAAGCAACTCTTCATCTGG+TGG | + | chr3.1:80641659-80641678 | MS.gene48495:CDS | 45.0% | |
| ACTCTTCATCTGGTGGAAAC+TGG | + | chr3.1:80641666-80641685 | MS.gene48495:CDS | 45.0% | |
| AGAAGAGGTTTCTGTGGTAG+AGG | + | chr3.1:80639262-80639281 | MS.gene48495:CDS | 45.0% | |
| AGAGAGGGAAAAAGTCCATC+GGG | - | chr3.1:80643497-80643516 | None:intergenic | 45.0% | |
| AGGATGGGAAGATTGTAGGA+AGG | + | chr3.1:80639018-80639037 | MS.gene48495:CDS | 45.0% | |
| AGTAGACGAGGATCCTTGTT+TGG | + | chr3.1:80642561-80642580 | MS.gene48495:intron | 45.0% | |
| ATGTGTGAGTGATGGTCACT+TGG | + | chr3.1:80643963-80643982 | MS.gene48495:intron | 45.0% | |
| ATTCTCTTCGTCTGAACTCG+AGG | - | chr3.1:80640617-80640636 | None:intergenic | 45.0% | |
| ATTGCCTTCACGGTATAGAG+AGG | - | chr3.1:80643513-80643532 | None:intergenic | 45.0% | |
| CACATAATTCTCGGTCATCC+TGG | - | chr3.1:80640495-80640514 | None:intergenic | 45.0% | |
| CCATTTATTCTCCGCAGTCA+AGG | + | chr3.1:80642881-80642900 | MS.gene48495:CDS | 45.0% | |
| CCTTGACTGCGGAGAATAAA+TGG | - | chr3.1:80642884-80642903 | None:intergenic | 45.0% | |
| CTCAAGTGAGCAAACTCATG+AGG | + | chr3.1:80639322-80639341 | MS.gene48495:CDS | 45.0% | |
| CTGGTGGAAACTGGAGAATT+TGG | + | chr3.1:80641675-80641694 | MS.gene48495:CDS | 45.0% | |
| CTTAAGGTTGGAATCCCGTT+GGG | + | chr3.1:80644595-80644614 | MS.gene48495:CDS | 45.0% | |
| CTTGCATTCACTCGTATCTC+AGG | + | chr3.1:80639397-80639416 | MS.gene48495:CDS | 45.0% | |
| GAAATAACAACAGGACCCTC+TGG | - | chr3.1:80643473-80643492 | None:intergenic | 45.0% | |
| GAAGAGGTTTCTGTGGTAGA+GGG | + | chr3.1:80639263-80639282 | MS.gene48495:CDS | 45.0% | |
| GAGTGTAGAAGAGGTTTCTG+TGG | + | chr3.1:80639256-80639275 | MS.gene48495:CDS | 45.0% | |
| GATGCTATCTGTTCGGAAGT+TGG | - | chr3.1:80641866-80641885 | None:intergenic | 45.0% | |
| GATTGCAATCCGTTCTATGC+TGG | + | chr3.1:80644538-80644557 | MS.gene48495:CDS | 45.0% | |
| GCAGCAATTGAGTGTAGAAG+AGG | + | chr3.1:80639247-80639266 | MS.gene48495:CDS | 45.0% | |
| GCGAAAAATGCCAGCCAAAT+GGG | + | chr3.1:80639742-80639761 | MS.gene48495:intron | 45.0% | |
| GTCATCCTGGTTGTTGTAAC+TGG | - | chr3.1:80640482-80640501 | None:intergenic | 45.0% | |
| GTCGTCGTTCAACAACAAGA+CGG | + | chr3.1:80638744-80638763 | MS.gene48495:CDS | 45.0% | |
| TATACCAGCTCTCTTACCAG+GGG | - | chr3.1:80641040-80641059 | None:intergenic | 45.0% | |
| TATCTTGCTCATGGGGAAAC+TGG | + | chr3.1:80639350-80639369 | MS.gene48495:CDS | 45.0% | |
| TCAAGATGGTGATCATGCTG+TGG | + | chr3.1:80639178-80639197 | MS.gene48495:CDS | 45.0% | |
| TCCTACAATCTTCCCATCCT+CGG | - | chr3.1:80639018-80639037 | None:intergenic | 45.0% | |
| TCCTACAGGTCAGATGTTCT+TGG | + | chr3.1:80642810-80642829 | MS.gene48495:intron | 45.0% | |
| TCTAAGCGTTCGCGAATACT+TGG | + | chr3.1:80639047-80639066 | MS.gene48495:CDS | 45.0% | |
| TCTAGATCCTGATCTGCTCA+AGG | - | chr3.1:80641708-80641727 | None:intergenic | 45.0% | |
| TCTATGCATGCACTCGTGAA+TGG | + | chr3.1:80644782-80644801 | MS.gene48495:CDS | 45.0% | |
| TGAGATTGCCGCGAATTTGT+TGG | + | chr3.1:80639136-80639155 | MS.gene48495:CDS | 45.0% | |
| TGCAGTTCAATGCCACCAAT+TGG | + | chr3.1:80642525-80642544 | MS.gene48495:intron | 45.0% | |
| TGCGAAAAATGCCAGCCAAA+TGG | + | chr3.1:80639741-80639760 | MS.gene48495:intron | 45.0% | |
| TGCTGAACAATGATTGCAGG+AGG | + | chr3.1:80645077-80645096 | MS.gene48495:intron | 45.0% | |
| TGCTTCCAGTTACAACAACC+AGG | + | chr3.1:80640474-80640493 | MS.gene48495:CDS | 45.0% | |
| TTACCAAACCGAACGTACCA+TGG | - | chr3.1:80638786-80638805 | None:intergenic | 45.0% | |
| TTGAACGACGACGATATCGA+CGG | - | chr3.1:80638736-80638755 | None:intergenic | 45.0% | |
| TTGCCTTCACGGTATAGAGA+GGG | - | chr3.1:80643512-80643531 | None:intergenic | 45.0% | |
| TTTCCCTCTCTATACCGTGA+AGG | + | chr3.1:80643506-80643525 | MS.gene48495:CDS | 45.0% | |
| ! | CATTTCAGGTCATCTTTGCC+AGG | - | chr3.1:80640913-80640932 | None:intergenic | 45.0% |
| ! | GCATCGTTGAATCTGAAGCA+AGG | + | chr3.1:80641881-80641900 | MS.gene48495:CDS | 45.0% |
| ! | GGATGGCAAAGTTTTACCAG+AGG | + | chr3.1:80643454-80643473 | MS.gene48495:intron | 45.0% |
| ! | GTGAATGCAAGACTTGGTCA+TGG | - | chr3.1:80639388-80639407 | None:intergenic | 45.0% |
| ! | GTGACTACTCTTTTCCCACT+CGG | + | chr3.1:80640051-80640070 | MS.gene48495:intron | 45.0% |
| ! | TGACTACTCTTTTCCCACTC+GGG | + | chr3.1:80640052-80640071 | MS.gene48495:intron | 45.0% |
| !! | GAGCACTGAGAAAAAGCAGT+TGG | - | chr3.1:80643274-80643293 | None:intergenic | 45.0% |
| !! | TAGAACGGATTGCAATCGGA+AGG | - | chr3.1:80644535-80644554 | None:intergenic | 45.0% |
| !! | TAAAACATAATAAATAATAT+TGG | - | chr3.1:80642043-80642062 | None:intergenic | 5.0% |
| !!! | TTATTTTGAATATTAAATAA+TGG | - | chr3.1:80644885-80644904 | None:intergenic | 5.0% |
| ACCGAATGGATGAAAGGGAC+CGG | - | chr3.1:80638709-80638728 | None:intergenic | 50.0% | |
| AGAGGGAAAAAGTCCATCGG+GGG | - | chr3.1:80643495-80643514 | None:intergenic | 50.0% | |
| ATACCAGCTCTCTTACCAGG+GGG | - | chr3.1:80641039-80641058 | None:intergenic | 50.0% | |
| ATCGTGATCTCGGATGTGGA+TGG | + | chr3.1:80642121-80642140 | MS.gene48495:CDS | 50.0% | |
| CAAGGCGTATACACCGTTTC+CGG | + | chr3.1:80638687-80638706 | MS.gene48495:CDS | 50.0% | |
| CAGTTACTGCATGAGCAGGA+AGG | + | chr3.1:80640961-80640980 | MS.gene48495:CDS | 50.0% | |
| CCAACGGGATTCCAACCTTA+AGG | - | chr3.1:80644597-80644616 | None:intergenic | 50.0% | |
| CCATCGGGGGAAATAACAAC+AGG | - | chr3.1:80643482-80643501 | None:intergenic | 50.0% | |
| CCCTAGAAATGAGGATGCTG+CGG | + | chr3.1:80640780-80640799 | MS.gene48495:CDS | 50.0% | |
| CCGCAGCATCCTCATTTCTA+GGG | - | chr3.1:80640783-80640802 | None:intergenic | 50.0% | |
| CCTAGAAATGAGGATGCTGC+GGG | + | chr3.1:80640781-80640800 | MS.gene48495:CDS | 50.0% | |
| CCTGATCTGCTCAAGGAGAA+AGG | - | chr3.1:80641701-80641720 | None:intergenic | 50.0% | |
| CCTTAAGGTTGGAATCCCGT+TGG | + | chr3.1:80644594-80644613 | MS.gene48495:CDS | 50.0% | |
| CCTTTCTCCTTGAGCAGATC+AGG | + | chr3.1:80641698-80641717 | MS.gene48495:CDS | 50.0% | |
| CTAGAAATGAGGATGCTGCG+GGG | + | chr3.1:80640782-80640801 | MS.gene48495:CDS | 50.0% | |
| CTATAGACGGGGTACAGTAC+AGG | - | chr3.1:80643164-80643183 | None:intergenic | 50.0% | |
| CTTCAGGGTACGGAAACTGA+GGG | + | chr3.1:80640262-80640281 | MS.gene48495:intron | 50.0% | |
| GACCAGTCAACACCAACCAA+AGG | - | chr3.1:80642846-80642865 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr3.1:80639922-80639941 | None:intergenic | 50.0% | |
| GAGAGGGAAAAAGTCCATCG+GGG | - | chr3.1:80643496-80643515 | None:intergenic | 50.0% | |
| GCCAAGAACATCTGACCTGT+AGG | - | chr3.1:80642814-80642833 | None:intergenic | 50.0% | |
| TAGAAATGAGGATGCTGCGG+GGG | + | chr3.1:80640783-80640802 | MS.gene48495:CDS | 50.0% | |
| TCAACTCCACCACACTCTCT+TGG | + | chr3.1:80640553-80640572 | MS.gene48495:CDS | 50.0% | |
| TCACCATGGTACGTTCGGTT+TGG | + | chr3.1:80638780-80638799 | MS.gene48495:CDS | 50.0% | |
| TCCGAGGATGGGAAGATTGT+AGG | + | chr3.1:80639014-80639033 | MS.gene48495:CDS | 50.0% | |
| TCCGGTCCCTTTCATCCATT+CGG | + | chr3.1:80638705-80638724 | MS.gene48495:CDS | 50.0% | |
| TCGTATCGTGATCTCGGATG+TGG | + | chr3.1:80642117-80642136 | MS.gene48495:CDS | 50.0% | |
| TCTTCGTCTGAACTCGAGGA+CGG | - | chr3.1:80640613-80640632 | None:intergenic | 50.0% | |
| TCTTGGCCAGTTCATGCCTT+TGG | + | chr3.1:80642827-80642846 | MS.gene48495:CDS | 50.0% | |
| TGGATGAAAGGGACCGGAAA+CGG | - | chr3.1:80638703-80638722 | None:intergenic | 50.0% | |
| TGGTGATCATGCTGTGGTAG+TGG | + | chr3.1:80639184-80639203 | MS.gene48495:CDS | 50.0% | |
| TTTGGGAGAAGGTCTGTGAG+TGG | + | chr3.1:80639077-80639096 | MS.gene48495:CDS | 50.0% | |
| ! | AGTCACTTTAGTCCCCGAGT+GGG | - | chr3.1:80640068-80640087 | None:intergenic | 50.0% |
| ! | CAATCACCAAGAGAGTGTGG+TGG | - | chr3.1:80640562-80640581 | None:intergenic | 50.0% |
| ! | CACCAACCAAAGGCATGAAC+TGG | - | chr3.1:80642836-80642855 | None:intergenic | 50.0% |
| ! | CGTTGAATCTGAAGCAAGGG+AGG | + | chr3.1:80641885-80641904 | MS.gene48495:CDS | 50.0% |
| ! | GACTACTCTTTTCCCACTCG+GGG | + | chr3.1:80640053-80640072 | MS.gene48495:intron | 50.0% |
| ! | TAGTCACTTTAGTCCCCGAG+TGG | - | chr3.1:80640069-80640088 | None:intergenic | 50.0% |
| !! | CCTGTTGTTATTTCCCCCGA+TGG | + | chr3.1:80643479-80643498 | MS.gene48495:CDS | 50.0% |
| !! | CTGCTCAGAAGTGCTTGTTG+CGG | - | chr3.1:80644816-80644835 | None:intergenic | 50.0% |
| !! | GTGGTAGAGGGTGTTGAAGA+GGG | + | chr3.1:80639275-80639294 | MS.gene48495:CDS | 50.0% |
| !! | GTGGTAGTGGAGAATGAGGA+TGG | + | chr3.1:80639197-80639216 | MS.gene48495:CDS | 50.0% |
| !! | TGCCTTTGGTTGGTGTTGAC+TGG | + | chr3.1:80642841-80642860 | MS.gene48495:CDS | 50.0% |
| !! | TGCTCAGAAGTGCTTGTTGC+GGG | - | chr3.1:80644815-80644834 | None:intergenic | 50.0% |
| !! | TGCTGTGGTAGTGGAGAATG+AGG | + | chr3.1:80639193-80639212 | MS.gene48495:CDS | 50.0% |
| !! | TGTGGTAGAGGGTGTTGAAG+AGG | + | chr3.1:80639274-80639293 | MS.gene48495:CDS | 50.0% |
| AGCTATGCTGGGGAAACAGC+AGG | + | chr3.1:80641934-80641953 | MS.gene48495:CDS | 55.0% | |
| ATGCAAGCGGTGGGGAGATT+AGG | + | chr3.1:80638651-80638670 | MS.gene48495:CDS | 55.0% | |
| CCCGCAGCATCCTCATTTCT+AGG | - | chr3.1:80640784-80640803 | None:intergenic | 55.0% | |
| CCTCAGTTTCCGTACCCTGA+AGG | - | chr3.1:80640264-80640283 | None:intergenic | 55.0% | |
| CCTTCAGGGTACGGAAACTG+AGG | + | chr3.1:80640261-80640280 | MS.gene48495:intron | 55.0% | |
| CGCAACAAGCACTTCTGAGC+AGG | + | chr3.1:80644814-80644833 | MS.gene48495:CDS | 55.0% | |
| GCGCCACCGAATGGATGAAA+GGG | - | chr3.1:80638714-80638733 | None:intergenic | 55.0% | |
| GGCCAGTTCATGCCTTTGGT+TGG | + | chr3.1:80642831-80642850 | MS.gene48495:CDS | 55.0% | |
| GGTCCCTTTCATCCATTCGG+TGG | + | chr3.1:80638708-80638727 | MS.gene48495:CDS | 55.0% | |
| TACCAGCTCTCTTACCAGGG+GGG | - | chr3.1:80641038-80641057 | None:intergenic | 55.0% | |
| TCACTGGACTCGGCATTTCC+TGG | + | chr3.1:80640892-80640911 | MS.gene48495:CDS | 55.0% | |
| TGCAAGCGGTGGGGAGATTA+GGG | + | chr3.1:80638652-80638671 | MS.gene48495:CDS | 55.0% | |
| TGCTCATGGGGAAACTGGTG+AGG | + | chr3.1:80639355-80639374 | MS.gene48495:CDS | 55.0% | |
| ! | CAGCCAAATGGGCTTGACGT+GGG | + | chr3.1:80639753-80639772 | MS.gene48495:intron | 55.0% |
| !! | GCTCAGAAGTGCTTGTTGCG+GGG | - | chr3.1:80644814-80644833 | None:intergenic | 55.0% |
| !! | GGTGTTGACTGGTCACAGAC+TGG | + | chr3.1:80642852-80642871 | MS.gene48495:CDS | 55.0% |
| ACTACGCTGAATCTCCCCCC+TGG | + | chr3.1:80641021-80641040 | MS.gene48495:CDS | 60.0% | |
| AGGATGCTGCGGGGGAAGTT+GGG | + | chr3.1:80640791-80640810 | MS.gene48495:CDS | 60.0% | |
| AGGCCCACGTCAAGCCCATT+TGG | - | chr3.1:80639759-80639778 | None:intergenic | 60.0% | |
| ATATCGACGGCGCCACCGAA+TGG | - | chr3.1:80638723-80638742 | None:intergenic | 60.0% | |
| CCACGTCAAGCCCATTTGGC+TGG | - | chr3.1:80639755-80639774 | None:intergenic | 60.0% | |
| GGCGCCACCGAATGGATGAA+AGG | - | chr3.1:80638715-80638734 | None:intergenic | 60.0% | |
| GGGGAAGTTGGGCAGCATAC+AGG | + | chr3.1:80640802-80640821 | MS.gene48495:CDS | 60.0% | |
| ! | AGCATCTGGGGTCGGATTCC+AGG | + | chr3.1:80643923-80643942 | MS.gene48495:intron | 60.0% |
| ! | CCAGCCAAATGGGCTTGACG+TGG | + | chr3.1:80639752-80639771 | MS.gene48495:intron | 60.0% |
| ! | TGCTGGTCGTGGGAGAGTAC+CGG | + | chr3.1:80644911-80644930 | MS.gene48495:intron | 60.0% |
| CTCCCCCCTGGTAAGAGAGC+TGG | + | chr3.1:80641033-80641052 | MS.gene48495:intron | 65.0% | |
| GAGGATGCTGCGGGGGAAGT+TGG | + | chr3.1:80640790-80640809 | MS.gene48495:CDS | 65.0% | |
| !! | CTGGTCGTGGGAGAGTACCG+GGG | + | chr3.1:80644913-80644932 | MS.gene48495:intron | 65.0% |
| !! | GCTGGTCGTGGGAGAGTACC+GGG | + | chr3.1:80644912-80644931 | MS.gene48495:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 80638651 | 80645152 | 80638651 | ID=MS.gene48495 |
| chr3.1 | mRNA | 80638651 | 80645152 | 80638651 | ID=MS.gene48495.t1;Parent=MS.gene48495 |
| chr3.1 | exon | 80638651 | 80639418 | 80638651 | ID=MS.gene48495.t1.exon1;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80638651 | 80639418 | 80638651 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80640268 | 80641042 | 80640268 | ID=MS.gene48495.t1.exon2;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80640268 | 80641042 | 80640268 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80641648 | 80641955 | 80641648 | ID=MS.gene48495.t1.exon3;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80641648 | 80641955 | 80641648 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80642082 | 80642155 | 80642082 | ID=MS.gene48495.t1.exon4;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80642082 | 80642155 | 80642082 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80642818 | 80642902 | 80642818 | ID=MS.gene48495.t1.exon5;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80642818 | 80642902 | 80642818 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80643260 | 80643346 | 80643260 | ID=MS.gene48495.t1.exon6;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80643260 | 80643346 | 80643260 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80643455 | 80643527 | 80643455 | ID=MS.gene48495.t1.exon7;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80643455 | 80643527 | 80643455 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80643809 | 80643852 | 80643809 | ID=MS.gene48495.t1.exon8;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80643809 | 80643852 | 80643809 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80644514 | 80644642 | 80644514 | ID=MS.gene48495.t1.exon9;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80644514 | 80644642 | 80644514 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80644737 | 80644835 | 80644737 | ID=MS.gene48495.t1.exon10;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80644737 | 80644835 | 80644737 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| chr3.1 | exon | 80645096 | 80645152 | 80645096 | ID=MS.gene48495.t1.exon11;Parent=MS.gene48495.t1 |
| chr3.1 | CDS | 80645096 | 80645152 | 80645096 | ID=cds.MS.gene48495.t1;Parent=MS.gene48495.t1 |
| Gene Sequence |
| Protein sequence |
