Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38722.t1 | XP_003603031.1 | 92.3 | 818 | 57 | 3 | 1 | 815 | 1 | 815 | 0.00E+00 | 1488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38722.t1 | Q9FMN2 | 42.5 | 957 | 362 | 27 | 1 | 814 | 1 | 912 | 3.1e-161 | 570.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38722.t1 | G7J6C5 | 92.3 | 818 | 57 | 3 | 1 | 815 | 1 | 815 | 0.0e+00 | 1488.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054635 | MS.gene38722 | 0.976504 | 5.96E-142 | -1.69E-46 |
| MS.gene056761 | MS.gene38722 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene38722 | -0.81758 | 3.06E-52 | -1.69E-46 |
| MS.gene060337 | MS.gene38722 | 0.808835 | 2.55E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38722 | MS.gene018524 | PPI |
| MS.gene38722 | MS.gene22487 | PPI |
| MS.gene38722 | MS.gene029899 | PPI |
| MS.gene38722 | MS.gene061927 | PPI |
| MS.gene38722 | MS.gene073815 | PPI |
| MS.gene38722 | MS.gene30874 | PPI |
| MS.gene38722 | MS.gene09815 | PPI |
| MS.gene38722 | MS.gene068563 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38722.t1 | MTR_3g101590 | 92.298 | 818 | 57 | 3 | 1 | 815 | 1 | 815 | 0.0 | 1522 |
| MS.gene38722.t1 | MTR_3g101590 | 91.779 | 742 | 55 | 3 | 1 | 739 | 1 | 739 | 0.0 | 1370 |
| MS.gene38722.t1 | MTR_1g019740 | 82.203 | 236 | 41 | 1 | 581 | 815 | 128 | 363 | 2.16e-136 | 409 |
| MS.gene38722.t1 | MTR_1g019740 | 82.203 | 236 | 41 | 1 | 581 | 815 | 268 | 503 | 2.13e-134 | 409 |
| MS.gene38722.t1 | MTR_1g019740 | 44.255 | 235 | 110 | 8 | 1 | 223 | 1 | 226 | 2.31e-42 | 162 |
| MS.gene38722.t1 | MTR_7g100370 | 68.562 | 299 | 81 | 3 | 523 | 815 | 559 | 850 | 1.25e-133 | 419 |
| MS.gene38722.t1 | MTR_7g100370 | 59.375 | 128 | 42 | 3 | 1 | 127 | 1 | 119 | 8.19e-40 | 159 |
| MS.gene38722.t1 | MTR_1g067380 | 66.781 | 292 | 95 | 1 | 524 | 815 | 619 | 908 | 9.68e-130 | 410 |
| MS.gene38722.t1 | MTR_1g067380 | 67.000 | 100 | 33 | 0 | 1 | 100 | 1 | 100 | 1.05e-39 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38722.t1 | AT5G42870 | 71.528 | 288 | 69 | 2 | 527 | 814 | 638 | 912 | 5.60e-140 | 437 |
| MS.gene38722.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 3.42e-50 | 191 |
| MS.gene38722.t1 | AT5G42870 | 70.486 | 288 | 67 | 3 | 527 | 814 | 638 | 907 | 3.64e-135 | 424 |
| MS.gene38722.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 3.37e-50 | 191 |
| MS.gene38722.t1 | AT3G09560 | 63.462 | 312 | 89 | 5 | 518 | 815 | 587 | 887 | 2.91e-127 | 403 |
| MS.gene38722.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.00e-40 | 160 |
| MS.gene38722.t1 | AT3G09560 | 63.462 | 312 | 89 | 5 | 518 | 815 | 587 | 887 | 2.91e-127 | 403 |
| MS.gene38722.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.00e-40 | 160 |
| MS.gene38722.t1 | AT3G09560 | 63.462 | 312 | 89 | 5 | 518 | 815 | 587 | 887 | 2.91e-127 | 403 |
| MS.gene38722.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.00e-40 | 160 |
| MS.gene38722.t1 | AT3G09560 | 63.462 | 312 | 89 | 5 | 518 | 815 | 587 | 887 | 2.91e-127 | 403 |
| MS.gene38722.t1 | AT3G09560 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 2.00e-40 | 160 |
| MS.gene38722.t1 | AT5G42870 | 71.154 | 260 | 62 | 2 | 527 | 786 | 638 | 884 | 1.24e-122 | 390 |
| MS.gene38722.t1 | AT5G42870 | 48.319 | 238 | 87 | 7 | 1 | 215 | 1 | 225 | 3.49e-50 | 191 |
Find 174 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGTTAGTTTGAGATTT+TGG | 0.141100 | 3.3:-84143630 | None:intergenic |
| CGTCTAAGTTTAAGCATTTC+AGG | 0.146908 | 3.3:-84144154 | None:intergenic |
| CCTTGACTGCGGAGAATAAA+TGG | 0.155534 | 3.3:-84146094 | None:intergenic |
| CGAATACTTGGTCTTATGTT+TGG | 0.225017 | 3.3:+84142287 | MS.gene38722:CDS |
| TCTTCTTTATCTATATATTC+AGG | 0.244090 | 3.3:-84143927 | None:intergenic |
| AAAATCTCAAACTAACAATT+TGG | 0.253796 | 3.3:+84143632 | MS.gene38722:CDS |
| TTTCGTCAAGGTCACTAAAA+AGG | 0.268524 | 3.3:-84143869 | None:intergenic |
| TTATTACCAGAAGAAATATT+TGG | 0.281868 | 3.3:-84144062 | None:intergenic |
| CCCGCAGCATCCTCATTTCT+AGG | 0.284851 | 3.3:-84144011 | None:intergenic |
| GAGTCCAGTGATTGACTTAA+AGG | 0.287905 | 3.3:-84144110 | None:intergenic |
| CTCAAATATATCTGTGGAAA+TGG | 0.299611 | 3.3:+84145319 | MS.gene38722:CDS |
| ATGCAAGCGGTGGGGAGATT+AGG | 0.300952 | 3.3:+84141879 | MS.gene38722:CDS |
| CTCATTTCTAGGGATAACTA+TGG | 0.305863 | 3.3:-84144000 | None:intergenic |
| CCTTTCTCCTTGAGCAGATC+AGG | 0.311428 | 3.3:+84144928 | MS.gene38722:CDS |
| AATCCGTTCTATGCTGGTTT+TGG | 0.317235 | 3.3:+84147768 | MS.gene38722:CDS |
| GAATACTTGGTCTTATGTTT+GGG | 0.323830 | 3.3:+84142288 | MS.gene38722:CDS |
| CTGGTGGAAACTGGAGAATT+TGG | 0.328889 | 3.3:+84144905 | MS.gene38722:CDS |
| TCCTTGCCAAATATTTCTTC+TGG | 0.329362 | 3.3:+84144056 | MS.gene38722:CDS |
| TTCAGAATCTTGATAAGCTT+TGG | 0.339252 | 3.3:-84144216 | None:intergenic |
| TCACTGGACTCGGCATTTCC+TGG | 0.342801 | 3.3:+84144122 | MS.gene38722:CDS |
| TGCTCAGAAGTGCTTGTTGC+GGG | 0.342914 | 3.3:-84148035 | None:intergenic |
| GTCATCCTGGCTGTTGTAAC+TGG | 0.344362 | 3.3:-84143709 | None:intergenic |
| ACTCTTCATCTGGTGGAAAC+TGG | 0.364263 | 3.3:+84144896 | MS.gene38722:CDS |
| CCAACGGGATTCCAACCTTA+AGG | 0.364577 | 3.3:-84147818 | None:intergenic |
| TGCAAGCGGTGGGGAGATTA+GGG | 0.368694 | 3.3:+84141880 | MS.gene38722:CDS |
| ATTCAAAATTGCATGCTTAG+AGG | 0.375535 | 3.3:+84147046 | MS.gene38722:CDS |
| TGTTATTATCACATAATTCT+CGG | 0.384405 | 3.3:-84143731 | None:intergenic |
| TGCCTTTGGTTGGTGTTGAC+TGG | 0.386172 | 3.3:+84146054 | MS.gene38722:CDS |
| TAGGAATTGTCGTGTAATAT+AGG | 0.389831 | 3.3:-84146521 | None:intergenic |
| GGTCTTTGAGTTTCATTCTC+AGG | 0.392056 | 3.3:+84143542 | MS.gene38722:CDS |
| AATAAGATTTATTGCCTTCA+CGG | 0.393930 | 3.3:-84146732 | None:intergenic |
| TGATGAAATCAGTTACCTTA+AGG | 0.397156 | 3.3:+84147803 | MS.gene38722:CDS |
| CAAGGCGTATACACCGTTTC+CGG | 0.397395 | 3.3:+84141915 | MS.gene38722:CDS |
| TCTTGGCCAGTTCATGCCTT+TGG | 0.397799 | 3.3:+84146040 | MS.gene38722:CDS |
| TCTAAGCGTTCGCGAATACT+TGG | 0.403981 | 3.3:+84142275 | MS.gene38722:CDS |
| TCCGGTCCCTTTCATCCATT+CGG | 0.407707 | 3.3:+84141933 | MS.gene38722:CDS |
| TCCGAGGATGGGAAGATTGT+AGG | 0.408097 | 3.3:+84142242 | MS.gene38722:CDS |
| GATAATATTTCTTATGAGAA+TGG | 0.410235 | 3.3:+84143948 | MS.gene38722:CDS |
| CAAACTAACAATTTGGATAT+AGG | 0.410575 | 3.3:+84143639 | MS.gene38722:CDS |
| TCCTACAGGTCAGATGTTCT+TGG | 0.416257 | 3.3:+84146023 | MS.gene38722:intron |
| TATCTTGCTCATGGGGAAAC+TGG | 0.417204 | 3.3:+84142581 | MS.gene38722:CDS |
| ATTCCTACTGAATCTTAAAC+AGG | 0.423793 | 3.3:+84146537 | MS.gene38722:CDS |
| CTTGCATTCACTCGTATCTC+AGG | 0.425477 | 3.3:+84142628 | MS.gene38722:CDS |
| CGCAACAAGCACTTCTGAGC+AGG | 0.427789 | 3.3:+84148037 | MS.gene38722:CDS |
| ATATTGATCATCAATCTTTG+AGG | 0.435136 | 3.3:+84142198 | MS.gene38722:CDS |
| CCTTCAGGGTACGGAAACTA+AGG | 0.436318 | 3.3:+84143491 | MS.gene38722:intron |
| CTTCTTTATCTATATATTCA+GGG | 0.438364 | 3.3:-84143926 | None:intergenic |
| TCTATGCATGCACTCGTGAA+TGG | 0.445811 | 3.3:+84148005 | MS.gene38722:CDS |
| ATTTCTCATTTGCAGGAGAA+TGG | 0.456087 | 3.3:+84146457 | MS.gene38722:intron |
| CATTTCAGGTCATCTTTGCC+AGG | 0.457046 | 3.3:-84144140 | None:intergenic |
| GATTGCAATCCGTTCTATGC+TGG | 0.458935 | 3.3:+84147762 | MS.gene38722:CDS |
| AGAAGAGGTTTCTGTGGTAG+AGG | 0.460405 | 3.3:+84142490 | MS.gene38722:CDS |
| TCACCATGGTACGTTCGGTT+TGG | 0.460726 | 3.3:+84142008 | MS.gene38722:CDS |
| AATCATCACCATGGTACGTT+CGG | 0.462335 | 3.3:+84142003 | MS.gene38722:CDS |
| CGAATTTGTTGGATATTAAG+TGG | 0.463895 | 3.3:+84142375 | MS.gene38722:CDS |
| CACATAATTCTCGGTCATCC+TGG | 0.465222 | 3.3:-84143722 | None:intergenic |
| TGGATGAAAGGGACCGGAAA+CGG | 0.465333 | 3.3:-84141928 | None:intergenic |
| CACCAACCAAAGGCATGAAC+TGG | 0.468960 | 3.3:-84146046 | None:intergenic |
| TCAACAAGCAACTCTTCATC+TGG | 0.473273 | 3.3:+84144886 | MS.gene38722:CDS |
| TGAGATTGCCGCGAATTTGT+TGG | 0.477774 | 3.3:+84142364 | MS.gene38722:CDS |
| CTCAAGTGAGCAAACTCATA+AGG | 0.478902 | 3.3:+84142553 | MS.gene38722:CDS |
| AGCATAGAACGGATTGCAAT+CGG | 0.479526 | 3.3:-84147760 | None:intergenic |
| GGGGAAGTTGGGCAGCATAC+AGG | 0.479739 | 3.3:+84144032 | MS.gene38722:CDS |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 3.3:+84147807 | MS.gene38722:CDS |
| TCTGTGCAAATCTTATTCTC+TGG | 0.489728 | 3.3:-84145012 | None:intergenic |
| CTTAAGGTTGGAATCCCGTT+GGG | 0.490494 | 3.3:+84147819 | MS.gene38722:CDS |
| GATGCTATCTGTTCGGAAGT+TGG | 0.491272 | 3.3:-84145093 | None:intergenic |
| TGTGGTAGAGGGTGTTGAAG+AGG | 0.492596 | 3.3:+84142502 | MS.gene38722:CDS |
| AAATCTTCATTATAAATCCC+AGG | 0.498505 | 3.3:+84147844 | MS.gene38722:CDS |
| CCCTACAATCTTCCCATCCT+CGG | 0.499678 | 3.3:-84142243 | None:intergenic |
| GAGAATGAGGATGGTTCTAT+TGG | 0.500784 | 3.3:+84142434 | MS.gene38722:CDS |
| TGGTTCTATTGGTGTTGTAA+AGG | 0.501741 | 3.3:+84142445 | MS.gene38722:CDS |
| AAGGTTATGTATCTTGCTCA+TGG | 0.502113 | 3.3:+84142572 | MS.gene38722:CDS |
| GGCCAGTTCATGCCTTTGGT+TGG | 0.502823 | 3.3:+84146044 | MS.gene38722:CDS |
| GCAGCAATTGAGTGTAGAAG+AGG | 0.505454 | 3.3:+84142475 | MS.gene38722:CDS |
| TTGGTCTTATGTTTGGGAGA+AGG | 0.506799 | 3.3:+84142294 | MS.gene38722:CDS |
| CTTGACTGCGGAGAATAAAT+GGG | 0.506888 | 3.3:-84146093 | None:intergenic |
| GTTCGGTTTGGTAAATTCCA+AGG | 0.508413 | 3.3:+84142020 | MS.gene38722:CDS |
| TCAACTCCACCACACTCTCT+TGG | 0.509203 | 3.3:+84143783 | MS.gene38722:CDS |
| TTTAAGTCAATCACTGGACT+CGG | 0.512647 | 3.3:+84144112 | MS.gene38722:CDS |
| CCGAGGATGGGAAGATTGTA+GGG | 0.513816 | 3.3:+84142243 | MS.gene38722:CDS |
| GGCGCCACCGAATGGATGAA+AGG | 0.515421 | 3.3:-84141940 | None:intergenic |
| CCTGATCTGCTCAAGGAGAA+AGG | 0.515753 | 3.3:-84144928 | None:intergenic |
| GAAATAACAACAGGACCCTC+TGG | 0.516526 | 3.3:-84146682 | None:intergenic |
| TGGTGATCATGCTGTGGTAG+TGG | 0.519796 | 3.3:+84142412 | MS.gene38722:CDS |
| GTGAATTTGAAGATGGTGTT+GGG | 0.520050 | 3.3:+84142327 | MS.gene38722:CDS |
| CACTAAGAATGCTGATGTAG+TGG | 0.520432 | 3.3:+84143518 | MS.gene38722:CDS |
| GTGGTAGAGGGTGTTGAAGA+GGG | 0.522900 | 3.3:+84142503 | MS.gene38722:CDS |
| GAAGAGGTTTCTGTGGTAGA+GGG | 0.525056 | 3.3:+84142491 | MS.gene38722:CDS |
| TCTTCCACATTGTACATACT+AGG | 0.528135 | 3.3:-84143585 | None:intergenic |
| AAAGCAGTTACTGCATGAGC+AGG | 0.529161 | 3.3:+84144187 | MS.gene38722:CDS |
| GCGCCACCGAATGGATGAAA+GGG | 0.531603 | 3.3:-84141939 | None:intergenic |
| ATTCTCTTCGTCTGAACTCG+AGG | 0.531939 | 3.3:-84143844 | None:intergenic |
| CTTAATATCCAACAAATTCG+CGG | 0.532615 | 3.3:-84142372 | None:intergenic |
| AGGTTATGTATCTTGCTCAT+GGG | 0.533460 | 3.3:+84142573 | MS.gene38722:CDS |
| CCTAGAAATGAGGATGCTGC+GGG | 0.534545 | 3.3:+84144011 | MS.gene38722:CDS |
| ATTCAACGATGCTATCTGTT+CGG | 0.535090 | 3.3:-84145100 | None:intergenic |
| GGTGTTGACTGGTCACAGAC+TGG | 0.535668 | 3.3:+84146065 | MS.gene38722:CDS |
| CCTTAAGGTTGGAATCCCGT+TGG | 0.536129 | 3.3:+84147818 | MS.gene38722:CDS |
| AGCTATGCTGGGGAAACAGC+AGG | 0.537208 | 3.3:+84145164 | MS.gene38722:CDS |
| CCCTAGAAATGAGGATGCTG+CGG | 0.537736 | 3.3:+84144010 | MS.gene38722:CDS |
| ATATCGACGGCGCCACCGAA+TGG | 0.539480 | 3.3:-84141948 | None:intergenic |
| CCGCAGCATCCTCATTTCTA+GGG | 0.541811 | 3.3:-84144010 | None:intergenic |
| GAATGATCGTATCGTGATCT+CGG | 0.542030 | 3.3:+84145341 | MS.gene38722:CDS |
| TTCTTTATCTATATATTCAG+GGG | 0.545200 | 3.3:-84143925 | None:intergenic |
| TGCTTCCAGTTACAACAGCC+AGG | 0.546268 | 3.3:+84143704 | MS.gene38722:CDS |
| ACCAGAAGAAATATTTGGCA+AGG | 0.547394 | 3.3:-84144057 | None:intergenic |
| GGTGAATTTGAAGATGGTGT+TGG | 0.551028 | 3.3:+84142326 | MS.gene38722:CDS |
| CATAGTTATCCCTAGAAATG+AGG | 0.553207 | 3.3:+84144001 | MS.gene38722:CDS |
| TTGGCATCATTTGGAATAGG+TGG | 0.556234 | 3.3:-84144967 | None:intergenic |
| ACCGAATGGATGAAAGGGAC+CGG | 0.561783 | 3.3:-84141934 | None:intergenic |
| ATCGTGATCTCGGATGTGGA+TGG | 0.562787 | 3.3:+84145351 | MS.gene38722:CDS |
| CCATTTATTCTCCGCAGTCA+AGG | 0.563293 | 3.3:+84146094 | MS.gene38722:CDS |
| GATCTCCTTGATGTTTCACT+AGG | 0.569676 | 3.3:-84143816 | None:intergenic |
| TTGCCTTCACGGTATAGAGA+GGG | 0.572218 | 3.3:-84146721 | None:intergenic |
| TCTTCGTCTGAACTCGAGGA+CGG | 0.573184 | 3.3:-84143840 | None:intergenic |
| GTTTACCTAGTGAAACATCA+AGG | 0.578560 | 3.3:+84143811 | MS.gene38722:CDS |
| GAGTGTAGAAGAGGTTTCTG+TGG | 0.580182 | 3.3:+84142484 | MS.gene38722:CDS |
| TTAGAGAGGATGCAAGCGGT+GGG | 0.583078 | 3.3:+84141870 | None:intergenic |
| TTTCCAAAACCAGCATAGAA+CGG | 0.585939 | 3.3:-84147771 | None:intergenic |
| ACAAGCAACTCTTCATCTGG+TGG | 0.588423 | 3.3:+84144889 | MS.gene38722:CDS |
| GGTCCCTTTCATCCATTCGG+TGG | 0.589130 | 3.3:+84141936 | MS.gene38722:CDS |
| GTGAGTGGTGAATTTGAAGA+TGG | 0.589262 | 3.3:+84142320 | MS.gene38722:CDS |
| TCGTATCGTGATCTCGGATG+TGG | 0.593644 | 3.3:+84145347 | MS.gene38722:CDS |
| ATTAGAGAGGATGCAAGCGG+TGG | 0.595958 | 3.3:+84141869 | None:intergenic |
| TCACCTGTTTAAGATTCAGT+AGG | 0.597998 | 3.3:-84146540 | None:intergenic |
| TTTCCCTCTCTATACCGTGA+AGG | 0.598398 | 3.3:+84146718 | MS.gene38722:CDS |
| CAAATGTATCTTGATAACAA+AGG | 0.598518 | 3.3:+84142104 | MS.gene38722:CDS |
| CGTTGAATCTGAAGCAAGGG+AGG | 0.599581 | 3.3:+84145115 | MS.gene38722:CDS |
| GCTGTTGTAACTGGAAGCAT+TGG | 0.599948 | 3.3:-84143700 | None:intergenic |
| TGCTCATGGGGAAACTGGTG+AGG | 0.600662 | 3.3:+84142586 | MS.gene38722:CDS |
| TCTAGATCCTGATCTGCTCA+AGG | 0.603927 | 3.3:-84144935 | None:intergenic |
| TTACCAAACCGAACGTACCA+TGG | 0.604008 | 3.3:-84142011 | None:intergenic |
| TCATTTCTAGGGATAACTAT+GGG | 0.607928 | 3.3:-84143999 | None:intergenic |
| GGTTATGTATCTTGCTCATG+GGG | 0.608246 | 3.3:+84142574 | MS.gene38722:CDS |
| TGCTGTGGTAGTGGAGAATG+AGG | 0.610182 | 3.3:+84142421 | MS.gene38722:CDS |
| CATCGTTGAATCTGAAGCAA+GGG | 0.610649 | 3.3:+84145112 | MS.gene38722:CDS |
| AATCTTCATTATAAATCCCA+GGG | 0.611431 | 3.3:+84147845 | MS.gene38722:CDS |
| ATTGCCTTCACGGTATAGAG+AGG | 0.614030 | 3.3:-84146722 | None:intergenic |
| ATACGAGTGAATGCAAGACT+TGG | 0.615146 | 3.3:-84142622 | None:intergenic |
| AAGTGGTCTACGAATCAAGA+TGG | 0.615279 | 3.3:+84142392 | MS.gene38722:CDS |
| CAGAATGAATGATCGATACG+AGG | 0.617552 | 3.3:+84143893 | MS.gene38722:CDS |
| GCATCGTTGAATCTGAAGCA+AGG | 0.617570 | 3.3:+84145111 | MS.gene38722:CDS |
| TAGAAATGAGGATGCTGCGG+GGG | 0.620903 | 3.3:+84144013 | MS.gene38722:CDS |
| CTGCTCAGAAGTGCTTGTTG+CGG | 0.621225 | 3.3:-84148036 | None:intergenic |
| TAAGAATGCTGATGTAGTGG+AGG | 0.623360 | 3.3:+84143521 | MS.gene38722:CDS |
| CAGTTACTGCATGAGCAGGA+AGG | 0.623575 | 3.3:+84144191 | MS.gene38722:CDS |
| GTGAATGCAAGACTTGGTCA+TGG | 0.624514 | 3.3:-84142616 | None:intergenic |
| GCTCAGAAGTGCTTGTTGCG+GGG | 0.625841 | 3.3:-84148034 | None:intergenic |
| TTAAAGGAAAACGAACGTGT+TGG | 0.629150 | 3.3:-84144094 | None:intergenic |
| ATATCATCAACAGATTCTAA+CGG | 0.633327 | 3.3:-84142179 | None:intergenic |
| GTACAATGTGGAAGATGTTG+AGG | 0.633807 | 3.3:+84143593 | MS.gene38722:CDS |
| TTAGGGAGCTACATTAGTCA+AGG | 0.635109 | 3.3:+84141897 | MS.gene38722:CDS |
| TTGATGCTCAAATATATCTG+TGG | 0.635548 | 3.3:+84145313 | MS.gene38722:CDS |
| AAACAATCACCAAGAGAGTG+TGG | 0.649865 | 3.3:-84143792 | None:intergenic |
| TAGAACGGATTGCAATCGGA+AGG | 0.650304 | 3.3:-84147756 | None:intergenic |
| AGAATGAATGATCGATACGA+GGG | 0.652534 | 3.3:+84143894 | MS.gene38722:CDS |
| CTTCAGGGTACGGAAACTAA+GGG | 0.659954 | 3.3:+84143492 | MS.gene38722:intron |
| GTGGTAGTGGAGAATGAGGA+TGG | 0.670297 | 3.3:+84142425 | MS.gene38722:CDS |
| GACCAGTCAACACCAACCAA+AGG | 0.670738 | 3.3:-84146056 | None:intergenic |
| TTGAACGACGACGATATCGA+CGG | 0.672004 | 3.3:-84141961 | None:intergenic |
| TGAGCCTAGTATGTACAATG+TGG | 0.685162 | 3.3:+84143581 | MS.gene38722:CDS |
| GTTCATTCAAATCATCACCA+TGG | 0.692552 | 3.3:+84141994 | MS.gene38722:CDS |
| CAATCACCAAGAGAGTGTGG+TGG | 0.694828 | 3.3:-84143789 | None:intergenic |
| TTAATTAGAGAGGATGCAAG+CGG | 0.696839 | 3.3:+84141866 | None:intergenic |
| TTTGGGAGAAGGTCTGTGAG+TGG | 0.698399 | 3.3:+84142305 | MS.gene38722:CDS |
| CTAGAAATGAGGATGCTGCG+GGG | 0.704073 | 3.3:+84144012 | MS.gene38722:CDS |
| AGGATGGGAAGATTGTAGGG+AGG | 0.707626 | 3.3:+84142246 | MS.gene38722:CDS |
| TACCAGCTCTCTTACCAGGG+GGG | 0.707953 | 3.3:-84144265 | None:intergenic |
| TAGAGAGGATGCAAGCGGTG+GGG | 0.712708 | 3.3:+84141871 | None:intergenic |
| ATTATGTGATAATAACACGA+AGG | 0.713676 | 3.3:+84143737 | MS.gene38722:CDS |
| TCAAGATGGTGATCATGCTG+TGG | 0.730772 | 3.3:+84142406 | MS.gene38722:CDS |
| ACATAAGCAAACCTTGACTG+CGG | 0.730908 | 3.3:-84146105 | None:intergenic |
| GTCGTCGTTCAACAACAAGA+CGG | 0.732356 | 3.3:+84141972 | MS.gene38722:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAAAAAAAAAAA+AGG | - | chr3.3:84147880-84147899 | None:intergenic | 0.0% |
| !! | TAAAACATAAGAAATAATAT+TGG | - | chr3.3:84145273-84145292 | None:intergenic | 10.0% |
| !! | TAACTTTATAATATTAATCT+TGG | + | chr3.3:84146967-84146986 | MS.gene38722:intron | 10.0% |
| !! | ATTATAGAAACATACATAAA+AGG | - | chr3.3:84145237-84145256 | None:intergenic | 15.0% |
| !! | TCAAATTTGATCAAATATTA+TGG | + | chr3.3:84145869-84145888 | MS.gene38722:intron | 15.0% |
| !! | TTATAGAAACATACATAAAA+GGG | - | chr3.3:84145236-84145255 | None:intergenic | 15.0% |
| !!! | ACTTATTTGAGATTATTTAA+TGG | + | chr3.3:84142683-84142702 | MS.gene38722:intron | 15.0% |
| !!! | ATTTTATGTATACATATATC+TGG | - | chr3.3:84147281-84147300 | None:intergenic | 15.0% |
| !! | AAAATCTCAAACTAACAATT+TGG | + | chr3.3:84143632-84143651 | MS.gene38722:CDS | 20.0% |
| !! | AAATATTGAAGTTAACTTAG+GGG | - | chr3.3:84147352-84147371 | None:intergenic | 20.0% |
| !! | ACAAATATTAGATTAAGACA+TGG | + | chr3.3:84144774-84144793 | MS.gene38722:intron | 20.0% |
| !! | ACAAATATTGAAGTTAACTT+AGG | - | chr3.3:84147354-84147373 | None:intergenic | 20.0% |
| !! | ACTGGTAGATATATAATATA+AGG | + | chr3.3:84147240-84147259 | MS.gene38722:intron | 20.0% |
| !! | CAAATATTGAAGTTAACTTA+GGG | - | chr3.3:84147353-84147372 | None:intergenic | 20.0% |
| !! | CTTCTTTATCTATATATTCA+GGG | - | chr3.3:84143929-84143948 | None:intergenic | 20.0% |
| !! | GAAAATATGAAGAAGAAAAA+AGG | - | chr3.3:84147002-84147021 | None:intergenic | 20.0% |
| !! | GATAACAAATTCATTTCTTT+AGG | + | chr3.3:84144675-84144694 | MS.gene38722:intron | 20.0% |
| !! | GATAATATTTCTTATGAGAA+TGG | + | chr3.3:84143948-84143967 | MS.gene38722:CDS | 20.0% |
| !! | TATTACCATAAATACTACTA+CGG | - | chr3.3:84145922-84145941 | None:intergenic | 20.0% |
| !! | TCTTCTTTATCTATATATTC+AGG | - | chr3.3:84143930-84143949 | None:intergenic | 20.0% |
| !! | TGTTATTATCACATAATTCT+CGG | - | chr3.3:84143734-84143753 | None:intergenic | 20.0% |
| !! | TTATGAAAATAAGCTGAAAA+GGG | - | chr3.3:84142754-84142773 | None:intergenic | 20.0% |
| !! | TTATTACCAGAAGAAATATT+TGG | - | chr3.3:84144065-84144084 | None:intergenic | 20.0% |
| !! | TTCTTTATCTATATATTCAG+GGG | - | chr3.3:84143928-84143947 | None:intergenic | 20.0% |
| !! | TTGATATATTGCCTTAATTA+CGG | + | chr3.3:84147090-84147109 | MS.gene38722:intron | 20.0% |
| !! | TTTCTTTCTCATTGTTAATT+TGG | + | chr3.3:84145474-84145493 | MS.gene38722:intron | 20.0% |
| !!! | AAATTGTTAGTTTGAGATTT+TGG | - | chr3.3:84143633-84143652 | None:intergenic | 20.0% |
| !!! | AATATATCTTTTTACATTGC+AGG | + | chr3.3:84146645-84146664 | MS.gene38722:intron | 20.0% |
| !!! | AGCTATATTTTATTTCATAG+AGG | - | chr3.3:84145608-84145627 | None:intergenic | 20.0% |
| !!! | ATTTGACTTAAAAGGTATAT+TGG | - | chr3.3:84145855-84145874 | None:intergenic | 20.0% |
| !!! | CAATTAAAAATTTTCAACTG+AGG | - | chr3.3:84146423-84146442 | None:intergenic | 20.0% |
| !!! | CTTATTTTCATAAGTTCTTT+AGG | + | chr3.3:84142761-84142780 | MS.gene38722:intron | 20.0% |
| !!! | TTGATCAAATTTGACTTAAA+AGG | - | chr3.3:84145863-84145882 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATGTTTTAGCA+TGG | + | chr3.3:84146342-84146361 | MS.gene38722:intron | 20.0% |
| ! | AAAAAAGGATTTATTTACCC+TGG | - | chr3.3:84147865-84147884 | None:intergenic | 25.0% |
| ! | AAAAAGGATTTATTTACCCT+GGG | - | chr3.3:84147864-84147883 | None:intergenic | 25.0% |
| ! | AAATCTTCATTATAAATCCC+AGG | + | chr3.3:84147844-84147863 | MS.gene38722:CDS | 25.0% |
| ! | AATAAGATTTATTGCCTTCA+CGG | - | chr3.3:84146735-84146754 | None:intergenic | 25.0% |
| ! | AATATTAGATTAAGACATGG+TGG | + | chr3.3:84144777-84144796 | MS.gene38722:intron | 25.0% |
| ! | AATCATGATTATTGTGAAGT+TGG | + | chr3.3:84145805-84145824 | MS.gene38722:intron | 25.0% |
| ! | AATCTTCATTATAAATCCCA+GGG | + | chr3.3:84147845-84147864 | MS.gene38722:CDS | 25.0% |
| ! | ACTGAATTAGTAACAATCTA+TGG | + | chr3.3:84144325-84144344 | MS.gene38722:intron | 25.0% |
| ! | ACTGTATATACTGTATTCTA+TGG | + | chr3.3:84144358-84144377 | MS.gene38722:intron | 25.0% |
| ! | ATATCATCAACAGATTCTAA+CGG | - | chr3.3:84142182-84142201 | None:intergenic | 25.0% |
| ! | ATATTGATCATCAATCTTTG+AGG | + | chr3.3:84142198-84142217 | MS.gene38722:CDS | 25.0% |
| ! | ATGATAAGAATTTAAAAGCC+AGG | - | chr3.3:84146308-84146327 | None:intergenic | 25.0% |
| ! | ATTATGTGATAATAACACGA+AGG | + | chr3.3:84143737-84143756 | MS.gene38722:CDS | 25.0% |
| ! | ATTTAGTGAAAAAGAAGGTT+AGG | + | chr3.3:84145061-84145080 | MS.gene38722:CDS | 25.0% |
| ! | CAAACTAACAATTTGGATAT+AGG | + | chr3.3:84143639-84143658 | MS.gene38722:CDS | 25.0% |
| ! | CAATATTTGTTTAAGCTTCA+AGG | + | chr3.3:84147364-84147383 | MS.gene38722:intron | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | - | chr3.3:84142755-84142774 | None:intergenic | 25.0% |
| ! | GCTTATAGCATGTATTAAAA+TGG | + | chr3.3:84142800-84142819 | MS.gene38722:intron | 25.0% |
| ! | TAGAGTAAAATTAAGCATCT+GGG | + | chr3.3:84147125-84147144 | MS.gene38722:intron | 25.0% |
| ! | TCATTAAGTGCTTATGTATA+AGG | - | chr3.3:84142859-84142878 | None:intergenic | 25.0% |
| ! | TCTCATAACATGTAAATACA+TGG | - | chr3.3:84146134-84146153 | None:intergenic | 25.0% |
| ! | TGATATATTGCCTTAATTAC+GGG | + | chr3.3:84147091-84147110 | MS.gene38722:intron | 25.0% |
| ! | TGATTATAACAGACTAAACA+AGG | - | chr3.3:84145790-84145809 | None:intergenic | 25.0% |
| ! | TGTAAGTTTCACTAAAGATT+TGG | + | chr3.3:84144415-84144434 | MS.gene38722:intron | 25.0% |
| ! | TTAGAGTAAAATTAAGCATC+TGG | + | chr3.3:84147124-84147143 | MS.gene38722:intron | 25.0% |
| ! | TTGCAATTTATTTGCATTCA+GGG | - | chr3.3:84143090-84143109 | None:intergenic | 25.0% |
| ! | TTTAGTGAAAAAGAAGGTTA+GGG | + | chr3.3:84145062-84145081 | MS.gene38722:CDS | 25.0% |
| ! | TTTGCAATTTATTTGCATTC+AGG | - | chr3.3:84143091-84143110 | None:intergenic | 25.0% |
| !! | ACTTTTCTTACATGATTCAT+TGG | + | chr3.3:84146879-84146898 | MS.gene38722:intron | 25.0% |
| !! | ATAATGAAGATTTTTCCCAA+CGG | - | chr3.3:84147837-84147856 | None:intergenic | 25.0% |
| !! | CAAATGTATCTTGATAACAA+AGG | + | chr3.3:84142104-84142123 | MS.gene38722:CDS | 25.0% |
| !! | CATATTTTCAGTCATTAGAA+GGG | + | chr3.3:84147013-84147032 | MS.gene38722:intron | 25.0% |
| !! | CTTAAAAGGTATATTGGTTA+TGG | - | chr3.3:84145849-84145868 | None:intergenic | 25.0% |
| !! | CTTGAAATTTTACATCCAAT+TGG | - | chr3.3:84145756-84145775 | None:intergenic | 25.0% |
| !! | TATTAGACACTACTATTTTG+AGG | + | chr3.3:84146796-84146815 | MS.gene38722:intron | 25.0% |
| !! | TCATATTTTCAGTCATTAGA+AGG | + | chr3.3:84147012-84147031 | MS.gene38722:intron | 25.0% |
| !!! | AAAACCACAATTTTTTTACC+TGG | + | chr3.3:84146287-84146306 | MS.gene38722:intron | 25.0% |
| !!! | AACCTTCTTTTTCACTAAAT+TGG | - | chr3.3:84145061-84145080 | None:intergenic | 25.0% |
| !!! | ACCTTCTTTTTCACTAAATT+GGG | - | chr3.3:84145060-84145079 | None:intergenic | 25.0% |
| !!! | ATTGCACTATTGATAGTTTT+TGG | + | chr3.3:84146205-84146224 | MS.gene38722:intron | 25.0% |
| !!! | CGTTTCACTTTTAATTTGTT+CGG | - | chr3.3:84147512-84147531 | None:intergenic | 25.0% |
| !!! | GATTTGAACGATTTTTTCTT+TGG | - | chr3.3:84142057-84142076 | None:intergenic | 25.0% |
| !!! | TAAAACTTTAAGACCTTGTT+TGG | - | chr3.3:84142922-84142941 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTTCTAAACCT+TGG | + | chr3.3:84143352-84143371 | MS.gene38722:intron | 25.0% |
| !!! | TTGCACTATTGATAGTTTTT+GGG | + | chr3.3:84146206-84146225 | MS.gene38722:intron | 25.0% |
| !!! | TTTTAAAAAGTCTCTAACTC+TGG | + | chr3.3:84145967-84145986 | MS.gene38722:intron | 25.0% |
| AAACAAAGGAGACATTACAA+TGG | - | chr3.3:84144298-84144317 | None:intergenic | 30.0% | |
| AAAGCCAGGTAAAAAAATTG+TGG | - | chr3.3:84146294-84146313 | None:intergenic | 30.0% | |
| AAAGTGAGAATCTATCTTTC+TGG | + | chr3.3:84145383-84145402 | MS.gene38722:intron | 30.0% | |
| AAATAATCACATGCACTAGA+TGG | - | chr3.3:84147412-84147431 | None:intergenic | 30.0% | |
| AAATTCATTTCTTTAGGCCT+GGG | + | chr3.3:84144681-84144700 | MS.gene38722:intron | 30.0% | |
| AACCATCAATAGTGCAATAA+TGG | - | chr3.3:84146255-84146274 | None:intergenic | 30.0% | |
| ACCATCAATAGTGCAATAAT+GGG | - | chr3.3:84146254-84146273 | None:intergenic | 30.0% | |
| ACCCAATTTAGTGAAAAAGA+AGG | + | chr3.3:84145056-84145075 | MS.gene38722:CDS | 30.0% | |
| AGAGTAAAATTAAGCATCTG+GGG | + | chr3.3:84147126-84147145 | MS.gene38722:intron | 30.0% | |
| ATATGTTGAAATTCTCCTTC+AGG | + | chr3.3:84143476-84143495 | MS.gene38722:intron | 30.0% | |
| ATCAACAAAGCAACTACATA+AGG | - | chr3.3:84144562-84144581 | None:intergenic | 30.0% | |
| ATGATAAGTACTTGTGTTGT+TGG | + | chr3.3:84142875-84142894 | MS.gene38722:intron | 30.0% | |
| ATTCAAAATTGCATGCTTAG+AGG | + | chr3.3:84147046-84147065 | MS.gene38722:CDS | 30.0% | |
| ATTCAGTTGACAGAAAACAA+AGG | - | chr3.3:84144312-84144331 | None:intergenic | 30.0% | |
| ATTCCTACTGAATCTTAAAC+AGG | + | chr3.3:84146537-84146556 | MS.gene38722:CDS | 30.0% | |
| CAAAATCGAACTTATGTAAC+TGG | + | chr3.3:84147222-84147241 | MS.gene38722:intron | 30.0% | |
| CGTAAAACAATCACTATAGA+CGG | - | chr3.3:84146389-84146408 | None:intergenic | 30.0% | |
| CTCAAATATATCTGTGGAAA+TGG | + | chr3.3:84145319-84145338 | MS.gene38722:CDS | 30.0% | |
| CTGAAAATTGTTCAAACTTC+TGG | - | chr3.3:84147674-84147693 | None:intergenic | 30.0% | |
| CTTAATATCCAACAAATTCG+CGG | - | chr3.3:84142375-84142394 | None:intergenic | 30.0% | |
| GAATTTCAACATATGAGTGT+TGG | - | chr3.3:84143470-84143489 | None:intergenic | 30.0% | |
| GATAAATATATGTAGAGCAC+TGG | + | chr3.3:84146822-84146841 | MS.gene38722:intron | 30.0% | |
| GTAAAACAATCACTATAGAC+GGG | - | chr3.3:84146388-84146407 | None:intergenic | 30.0% | |
| GTGAGATATGATATTCATCA+TGG | + | chr3.3:84146921-84146940 | MS.gene38722:intron | 30.0% | |
| TAAAACAATCACTATAGACG+GGG | - | chr3.3:84146387-84146406 | None:intergenic | 30.0% | |
| TAAGGCAATATATCAACAAG+TGG | - | chr3.3:84147086-84147105 | None:intergenic | 30.0% | |
| TAGGAATTGTCGTGTAATAT+AGG | - | chr3.3:84146524-84146543 | None:intergenic | 30.0% | |
| TATAGTCTATGACTGCATTT+AGG | - | chr3.3:84143009-84143028 | None:intergenic | 30.0% | |
| TATGTTGAAATTCTCCTTCA+GGG | + | chr3.3:84143477-84143496 | MS.gene38722:intron | 30.0% | |
| TCACTGATCCATCAATTAAA+TGG | - | chr3.3:84146905-84146924 | None:intergenic | 30.0% | |
| TCCTTGAATATAAGTTTGTC+AGG | + | chr3.3:84147913-84147932 | MS.gene38722:intron | 30.0% | |
| TGATGAAATCAGTTACCTTA+AGG | + | chr3.3:84147803-84147822 | MS.gene38722:CDS | 30.0% | |
| TGCAAGCTTAAACATAAGAA+AGG | - | chr3.3:84147939-84147958 | None:intergenic | 30.0% | |
| TGTCAAAGATAGTTGTTTGA+TGG | - | chr3.3:84142950-84142969 | None:intergenic | 30.0% | |
| TTCAGAATCTTGATAAGCTT+TGG | - | chr3.3:84144219-84144238 | None:intergenic | 30.0% | |
| TTCATTGGCCATTTAATTGA+TGG | + | chr3.3:84146894-84146913 | MS.gene38722:intron | 30.0% | |
| TTCTTATGTTTAAGCTTGCA+GGG | + | chr3.3:84147939-84147958 | MS.gene38722:intron | 30.0% | |
| TTGATGCTCAAATATATCTG+TGG | + | chr3.3:84145313-84145332 | MS.gene38722:CDS | 30.0% | |
| TTTCATGAGATTTACGAACT+AGG | + | chr3.3:84144730-84144749 | MS.gene38722:intron | 30.0% | |
| TTTCTTATGTTTAAGCTTGC+AGG | + | chr3.3:84147938-84147957 | MS.gene38722:intron | 30.0% | |
| ! | AAAACAGATTAGAGTTTTGC+TGG | - | chr3.3:84143439-84143458 | None:intergenic | 30.0% |
| ! | AACAACAGATGTATTGACAA+AGG | - | chr3.3:84145945-84145964 | None:intergenic | 30.0% |
| ! | AACAATTTTCAGCATGATCA+CGG | + | chr3.3:84147682-84147701 | MS.gene38722:intron | 30.0% |
| ! | AGCAAAACTCTAATCTGTTT+TGG | + | chr3.3:84143438-84143457 | MS.gene38722:intron | 30.0% |
| ! | ATGATTTTGTGTCAAGACTT+CGG | - | chr3.3:84147980-84147999 | None:intergenic | 30.0% |
| ! | ATTACTCCAATGTGATAATG+TGG | + | chr3.3:84146153-84146172 | MS.gene38722:intron | 30.0% |
| ! | ATTGCCAAAAAGATCACTTT+TGG | - | chr3.3:84144989-84145008 | None:intergenic | 30.0% |
| ! | CAAATATCTTCAGGTATTGT+CGG | - | chr3.3:84145502-84145521 | None:intergenic | 30.0% |
| ! | CATGCAATTTTGAATTCATG+AGG | - | chr3.3:84147041-84147060 | None:intergenic | 30.0% |
| ! | GAAATTTTACATCCAATTGG+TGG | - | chr3.3:84145753-84145772 | None:intergenic | 30.0% |
| ! | TAATGAAGATTTTTCCCAAC+GGG | - | chr3.3:84147836-84147855 | None:intergenic | 30.0% |
| ! | TATCTTTTTACATTGCAGGA+TGG | + | chr3.3:84146649-84146668 | MS.gene38722:intron | 30.0% |
| ! | TCATTTCTAGGGATAACTAT+GGG | - | chr3.3:84144002-84144021 | None:intergenic | 30.0% |
| ! | TGTAAAATTTCAAGTAGACG+AGG | + | chr3.3:84145762-84145781 | MS.gene38722:intron | 30.0% |
| ! | TTTTCCTTTAAGTCAATCAC+TGG | + | chr3.3:84144106-84144125 | MS.gene38722:CDS | 30.0% |
| !! | CGAATTTGTTGGATATTAAG+TGG | + | chr3.3:84142375-84142394 | MS.gene38722:CDS | 30.0% |
| !! | GAATACTTGGTCTTATGTTT+GGG | + | chr3.3:84142288-84142307 | MS.gene38722:CDS | 30.0% |
| !! | TAAGTTGTTTTGTCCAAACA+AGG | + | chr3.3:84142906-84142925 | MS.gene38722:intron | 30.0% |
| !! | TCAAATAAGTTGATCCAAAC+AGG | - | chr3.3:84142673-84142692 | None:intergenic | 30.0% |
| !! | TGCTATAAGCTGTTTTCATA+AGG | - | chr3.3:84142790-84142809 | None:intergenic | 30.0% |
| !! | TTACGTTTGATTTGATCAAC+AGG | + | chr3.3:84145290-84145309 | MS.gene38722:intron | 30.0% |
| !!! | AATTGTGGTTTTAACAGACA+CGG | - | chr3.3:84146279-84146298 | None:intergenic | 30.0% |
| !!! | AGTATTTTGGTAGAGCAAAA+TGG | + | chr3.3:84144487-84144506 | MS.gene38722:intron | 30.0% |
| !!! | CATGATTTTGTTTTCCAACT+TGG | - | chr3.3:84144855-84144874 | None:intergenic | 30.0% |
| !!! | CTTTGGATTTTAAAACACCT+TGG | - | chr3.3:84142040-84142059 | None:intergenic | 30.0% |
| !!! | TTGATAGTTTTTGGGTAATG+TGG | + | chr3.3:84146214-84146233 | MS.gene38722:intron | 30.0% |
| !!! | TTTTTTCTAAACCTTGGTCA+TGG | + | chr3.3:84143358-84143377 | MS.gene38722:intron | 30.0% |
| !!! | TTTTTTGTTTCATGTCCTAC+AGG | + | chr3.3:84146009-84146028 | MS.gene38722:intron | 30.0% |
| AACTTGATCTGACAATATGC+TGG | + | chr3.3:84145425-84145444 | MS.gene38722:intron | 35.0% | |
| AAGGTTATGTATCTTGCTCA+TGG | + | chr3.3:84142572-84142591 | MS.gene38722:CDS | 35.0% | |
| AATGTATGATCAGTGCATTC+AGG | - | chr3.3:84146185-84146204 | None:intergenic | 35.0% | |
| AATTCATTTCTTTAGGCCTG+GGG | + | chr3.3:84144682-84144701 | MS.gene38722:intron | 35.0% | |
| ACCAACAAAGTCTACATTCA+GGG | + | chr3.3:84143223-84143242 | MS.gene38722:intron | 35.0% | |
| ACCAGAAGAAATATTTGGCA+AGG | - | chr3.3:84144060-84144079 | None:intergenic | 35.0% | |
| ACGCAAGTGAATGAAAAGAA+AGG | - | chr3.3:84145680-84145699 | None:intergenic | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr3.3:84143119-84143138 | None:intergenic | 35.0% | |
| AGAATGAATGATCGATACGA+GGG | + | chr3.3:84143894-84143913 | MS.gene38722:CDS | 35.0% | |
| AGACTTTGTTGGTCAATTTG+AGG | - | chr3.3:84143216-84143235 | None:intergenic | 35.0% | |
| AGGTTATGTATCTTGCTCAT+GGG | + | chr3.3:84142573-84142592 | MS.gene38722:CDS | 35.0% | |
| AGTCATAGACTATAGAGAGA+CGG | + | chr3.3:84143015-84143034 | MS.gene38722:intron | 35.0% | |
| ATATATCAACAAGTGGAAGC+TGG | - | chr3.3:84147079-84147098 | None:intergenic | 35.0% | |
| ATGAGCCGTAGTAGTATTTA+TGG | + | chr3.3:84145914-84145933 | MS.gene38722:intron | 35.0% | |
| ATTCAACGATGCTATCTGTT+CGG | - | chr3.3:84145103-84145122 | None:intergenic | 35.0% | |
| ATTCAGCAATGAAATTGCAG+AGG | - | chr3.3:84145546-84145565 | None:intergenic | 35.0% | |
| ATTTCTCATTTGCAGGAGAA+TGG | + | chr3.3:84146457-84146476 | MS.gene38722:intron | 35.0% | |
| CAAAATTATGTAGGCTCTGT+AGG | - | chr3.3:84147539-84147558 | None:intergenic | 35.0% | |
| CAAATTCATTTCTTTAGGCC+TGG | + | chr3.3:84144680-84144699 | MS.gene38722:intron | 35.0% | |
| CATAGCTGTAGAAAAAGTGA+AGG | - | chr3.3:84145151-84145170 | None:intergenic | 35.0% | |
| CATAGTTATCCCTAGAAATG+AGG | + | chr3.3:84144001-84144020 | MS.gene38722:CDS | 35.0% | |
| CGACAATACCTGAAGATATT+TGG | + | chr3.3:84145500-84145519 | MS.gene38722:intron | 35.0% | |
| CGTCTAAGTTTAAGCATTTC+AGG | - | chr3.3:84144157-84144176 | None:intergenic | 35.0% | |
| CTCATGTATGTAGCATTACT+TGG | - | chr3.3:84147313-84147332 | None:intergenic | 35.0% | |
| CTCATTTACACCCGTAATTA+AGG | - | chr3.3:84147104-84147123 | None:intergenic | 35.0% | |
| GAAAAAGAGACTTGATACTC+TGG | - | chr3.3:84147737-84147756 | None:intergenic | 35.0% | |
| GAAATCAGTTACCTTAAGGT+TGG | + | chr3.3:84147807-84147826 | MS.gene38722:CDS | 35.0% | |
| GACATTCATTGCAGAAAATC+TGG | + | chr3.3:84144650-84144669 | MS.gene38722:intron | 35.0% | |
| GACGACTCATTTCATATTCA+GGG | - | chr3.3:84143059-84143078 | None:intergenic | 35.0% | |
| GACTTTGTTGGTCAATTTGA+GGG | - | chr3.3:84143215-84143234 | None:intergenic | 35.0% | |
| GCCTGACAAACTTATATTCA+AGG | - | chr3.3:84147917-84147936 | None:intergenic | 35.0% | |
| GTATGTAGCATTACTTGGAA+AGG | - | chr3.3:84147308-84147327 | None:intergenic | 35.0% | |
| GTGAATTTGAAGATGGTGTT+GGG | + | chr3.3:84142327-84142346 | MS.gene38722:CDS | 35.0% | |
| GTTAGACACCAAATATCTTC+AGG | - | chr3.3:84145511-84145530 | None:intergenic | 35.0% | |
| GTTCATTCAAATCATCACCA+TGG | + | chr3.3:84141994-84142013 | MS.gene38722:CDS | 35.0% | |
| GTTGGAAAACAAAATCATGC+AGG | + | chr3.3:84144856-84144875 | MS.gene38722:intron | 35.0% | |
| GTTTACCTAGTGAAACATCA+AGG | + | chr3.3:84143811-84143830 | MS.gene38722:CDS | 35.0% | |
| TCAATTAAACTCCATGACCA+AGG | - | chr3.3:84143372-84143391 | None:intergenic | 35.0% | |
| TCACTCACACATAAACAGAA+AGG | - | chr3.3:84147170-84147189 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr3.3:84143134-84143153 | None:intergenic | 35.0% | |
| TCCCACTTCCAAAATTATGT+AGG | - | chr3.3:84147548-84147567 | None:intergenic | 35.0% | |
| TCCTTGCCAAATATTTCTTC+TGG | + | chr3.3:84144056-84144075 | MS.gene38722:CDS | 35.0% | |
| TCTGCAATTTCATTGCTGAA+TGG | + | chr3.3:84145545-84145564 | MS.gene38722:intron | 35.0% | |
| TCTGTGCAAATCTTATTCTC+TGG | - | chr3.3:84145015-84145034 | None:intergenic | 35.0% | |
| TCTTCCACATTGTACATACT+AGG | - | chr3.3:84143588-84143607 | None:intergenic | 35.0% | |
| TGACGACTCATTTCATATTC+AGG | - | chr3.3:84143060-84143079 | None:intergenic | 35.0% | |
| TTAAAGGAAAACGAACGTGT+TGG | - | chr3.3:84144097-84144116 | None:intergenic | 35.0% | |
| TTCTGTTTATGTGTGAGTGA+TGG | + | chr3.3:84147170-84147189 | MS.gene38722:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr3.3:84143252-84143271 | MS.gene38722:intron | 35.0% | |
| TTTAAGTCAATCACTGGACT+CGG | + | chr3.3:84144112-84144131 | MS.gene38722:CDS | 35.0% | |
| TTTCCAAAACCAGCATAGAA+CGG | - | chr3.3:84147774-84147793 | None:intergenic | 35.0% | |
| TTTCGTCAAGGTCACTAAAA+AGG | - | chr3.3:84143872-84143891 | None:intergenic | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr3.3:84143251-84143270 | MS.gene38722:intron | 35.0% | |
| TTTGGGTAATGTGGTTAATC+TGG | + | chr3.3:84146223-84146242 | MS.gene38722:intron | 35.0% | |
| ! | CATTCATTCTGTTTTCGTCA+AGG | - | chr3.3:84143884-84143903 | None:intergenic | 35.0% |
| ! | CTACAGAGCCTACATAATTT+TGG | + | chr3.3:84147537-84147556 | MS.gene38722:intron | 35.0% |
| ! | CTCATTTCTAGGGATAACTA+TGG | - | chr3.3:84144003-84144022 | None:intergenic | 35.0% |
| ! | GAGACATGTGTCAAGTATTT+TGG | + | chr3.3:84144474-84144493 | MS.gene38722:intron | 35.0% |
| ! | GATGCCAAAAGTGATCTTTT+TGG | + | chr3.3:84144982-84145001 | MS.gene38722:CDS | 35.0% |
| ! | TAAAATTAAGCATCTGGGGT+CGG | + | chr3.3:84147130-84147149 | MS.gene38722:intron | 35.0% |
| ! | TCACCTGTTTAAGATTCAGT+AGG | - | chr3.3:84146543-84146562 | None:intergenic | 35.0% |
| ! | TCATAGTCTTAAGACCTGTT+TGG | + | chr3.3:84142656-84142675 | MS.gene38722:intron | 35.0% |
| ! | TTTCCAGGAAGCATATTTCA+AGG | - | chr3.3:84144534-84144553 | None:intergenic | 35.0% |
| ! | TTTTGGTAGAGCAAAATGGA+AGG | + | chr3.3:84144491-84144510 | MS.gene38722:intron | 35.0% |
| !! | ACATAACACTTGCTGTATGA+AGG | + | chr3.3:84144604-84144623 | MS.gene38722:intron | 35.0% |
| !! | ACTTTTTCTACAGCTATGCT+GGG | + | chr3.3:84145153-84145172 | MS.gene38722:CDS | 35.0% |
| !! | AGATCACTTTTGGCATCATT+TGG | - | chr3.3:84144979-84144998 | None:intergenic | 35.0% |
| !! | AGCCTACATAATTTTGGAAG+TGG | + | chr3.3:84147543-84147562 | MS.gene38722:intron | 35.0% |
| !! | CATAACACTTGCTGTATGAA+GGG | + | chr3.3:84144605-84144624 | MS.gene38722:intron | 35.0% |
| !! | CGAATACTTGGTCTTATGTT+TGG | + | chr3.3:84142287-84142306 | MS.gene38722:CDS | 35.0% |
| !! | CTACTACATGCTTTAGTTTG+CGG | + | chr3.3:84144452-84144471 | MS.gene38722:intron | 35.0% |
| !! | CTTTTGGCATCATTTGGAAT+AGG | - | chr3.3:84144973-84144992 | None:intergenic | 35.0% |
| !! | GAGATTTTGGAGATGTTGTT+AGG | - | chr3.3:84143620-84143639 | None:intergenic | 35.0% |
| !! | GCCTACATAATTTTGGAAGT+GGG | + | chr3.3:84147544-84147563 | MS.gene38722:intron | 35.0% |
| !! | TGGTTCTATTGGTGTTGTAA+AGG | + | chr3.3:84142445-84142464 | MS.gene38722:CDS | 35.0% |
| !!! | CTATGCTGGTTTTGGAAATA+GGG | + | chr3.3:84147776-84147795 | MS.gene38722:CDS | 35.0% |
| !!! | GAGTTGTAATTTTGATTCCG+AGG | + | chr3.3:84142226-84142245 | MS.gene38722:CDS | 35.0% |
| !!! | GTAATTTTGATTCCGAGGAT+GGG | + | chr3.3:84142231-84142250 | MS.gene38722:CDS | 35.0% |
| !!! | TCTATGCTGGTTTTGGAAAT+AGG | + | chr3.3:84147775-84147794 | MS.gene38722:CDS | 35.0% |
| !!! | TGTAATTTTGATTCCGAGGA+TGG | + | chr3.3:84142230-84142249 | MS.gene38722:CDS | 35.0% |
| AAAAGTCTCTAACTCTGGTG+TGG | + | chr3.3:84145972-84145991 | MS.gene38722:intron | 40.0% | |
| AAACAATCACCAAGAGAGTG+TGG | - | chr3.3:84143795-84143814 | None:intergenic | 40.0% | |
| AACAAGTACATTATACCCCC+AGG | - | chr3.3:84144701-84144720 | None:intergenic | 40.0% | |
| AAGCACTCGTAAGACTGTTT+AGG | + | chr3.3:84142709-84142728 | MS.gene38722:intron | 40.0% | |
| AAGTGGTCTACGAATCAAGA+TGG | + | chr3.3:84142392-84142411 | MS.gene38722:CDS | 40.0% | |
| AATCATCACCATGGTACGTT+CGG | + | chr3.3:84142003-84142022 | MS.gene38722:CDS | 40.0% | |
| AATTCCCCATAGAGAGACAT+AGG | + | chr3.3:84143318-84143337 | MS.gene38722:intron | 40.0% | |
| ACATAAGCAAACCTTGACTG+CGG | - | chr3.3:84146108-84146127 | None:intergenic | 40.0% | |
| ACGATTCCTATGTCTCTCTA+TGG | - | chr3.3:84143327-84143346 | None:intergenic | 40.0% | |
| ATACGAGTGAATGCAAGACT+TGG | - | chr3.3:84142625-84142644 | None:intergenic | 40.0% | |
| ATTCATTTCTTTAGGCCTGG+GGG | + | chr3.3:84144683-84144702 | MS.gene38722:intron | 40.0% | |
| CACTAAGAATGCTGATGTAG+TGG | + | chr3.3:84143518-84143537 | MS.gene38722:CDS | 40.0% | |
| CAGAATGAATGATCGATACG+AGG | + | chr3.3:84143893-84143912 | MS.gene38722:CDS | 40.0% | |
| CGATTCCTATGTCTCTCTAT+GGG | - | chr3.3:84143326-84143345 | None:intergenic | 40.0% | |
| CTACATAAGGCTGTATTTCC+AGG | - | chr3.3:84144549-84144568 | None:intergenic | 40.0% | |
| CTCAAGTGAGCAAACTCATA+AGG | + | chr3.3:84142553-84142572 | MS.gene38722:CDS | 40.0% | |
| CTGCAAATGAGAAATCGACA+AGG | - | chr3.3:84146452-84146471 | None:intergenic | 40.0% | |
| CTTGACTGCGGAGAATAAAT+GGG | - | chr3.3:84146096-84146115 | None:intergenic | 40.0% | |
| GAATGATCGTATCGTGATCT+CGG | + | chr3.3:84145341-84145360 | MS.gene38722:CDS | 40.0% | |
| GACCAACAAAGTCTACATTC+AGG | + | chr3.3:84143222-84143241 | MS.gene38722:intron | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr3.3:84143120-84143139 | None:intergenic | 40.0% | |
| GATCTCCTTGATGTTTCACT+AGG | - | chr3.3:84143819-84143838 | None:intergenic | 40.0% | |
| GATTCCTATGTCTCTCTATG+GGG | - | chr3.3:84143325-84143344 | None:intergenic | 40.0% | |
| GCCCATTATTGCACTATTGA+TGG | + | chr3.3:84146250-84146269 | MS.gene38722:intron | 40.0% | |
| GGAAAACAAAATCATGCAGG+TGG | + | chr3.3:84144859-84144878 | MS.gene38722:intron | 40.0% | |
| GGTGAATTTGAAGATGGTGT+TGG | + | chr3.3:84142326-84142345 | MS.gene38722:CDS | 40.0% | |
| GGTTATGTATCTTGCTCATG+GGG | + | chr3.3:84142574-84142593 | MS.gene38722:CDS | 40.0% | |
| GTACAATGTGGAAGATGTTG+AGG | + | chr3.3:84143593-84143612 | MS.gene38722:CDS | 40.0% | |
| GTACCTTGAAATATGCTTCC+TGG | + | chr3.3:84144528-84144547 | MS.gene38722:intron | 40.0% | |
| GTCATAGACTATAGAGAGAC+GGG | + | chr3.3:84143016-84143035 | MS.gene38722:intron | 40.0% | |
| GTGAGTGGTGAATTTGAAGA+TGG | + | chr3.3:84142320-84142339 | MS.gene38722:CDS | 40.0% | |
| TAAGAATGCTGATGTAGTGG+AGG | + | chr3.3:84143521-84143540 | MS.gene38722:CDS | 40.0% | |
| TAGAGAGGGAAAAAGTCCAT+CGG | - | chr3.3:84146710-84146729 | None:intergenic | 40.0% | |
| TCAACAAGCAACTCTTCATC+TGG | + | chr3.3:84144886-84144905 | MS.gene38722:CDS | 40.0% | |
| TCCCTGAATGTAGACTTTGT+TGG | - | chr3.3:84143227-84143246 | None:intergenic | 40.0% | |
| TGAAATTCTCCTTCAGGGTA+CGG | + | chr3.3:84143482-84143501 | MS.gene38722:intron | 40.0% | |
| TGAGATTTACGAACTAGGCA+TGG | + | chr3.3:84144735-84144754 | MS.gene38722:intron | 40.0% | |
| TGAGCCTAGTATGTACAATG+TGG | + | chr3.3:84143581-84143600 | MS.gene38722:CDS | 40.0% | |
| TTAGGGAGCTACATTAGTCA+AGG | + | chr3.3:84141897-84141916 | MS.gene38722:CDS | 40.0% | |
| TTATACCAGCTCTCTTACCA+GGG | - | chr3.3:84144271-84144290 | None:intergenic | 40.0% | |
| TTTATACCAGCTCTCTTACC+AGG | - | chr3.3:84144272-84144291 | None:intergenic | 40.0% | |
| ! | CATCGTTGAATCTGAAGCAA+GGG | + | chr3.3:84145112-84145131 | MS.gene38722:CDS | 40.0% |
| ! | CTTTTTCTACAGCTATGCTG+GGG | + | chr3.3:84145154-84145173 | MS.gene38722:CDS | 40.0% |
| ! | GAGAATGAGGATGGTTCTAT+TGG | + | chr3.3:84142434-84142453 | MS.gene38722:CDS | 40.0% |
| ! | GAGTCCAGTGATTGACTTAA+AGG | - | chr3.3:84144113-84144132 | None:intergenic | 40.0% |
| ! | GATGGCAAAGTTTTACCAGA+GGG | + | chr3.3:84146667-84146686 | MS.gene38722:CDS | 40.0% |
| ! | GGTCTTTGAGTTTCATTCTC+AGG | + | chr3.3:84143542-84143561 | MS.gene38722:CDS | 40.0% |
| ! | TCTTTTCATTCACTTGCGTC+AGG | + | chr3.3:84145681-84145700 | MS.gene38722:intron | 40.0% |
| ! | TTGGCATCATTTGGAATAGG+TGG | - | chr3.3:84144970-84144989 | None:intergenic | 40.0% |
| !! | AGCATAGAACGGATTGCAAT+CGG | - | chr3.3:84147763-84147782 | None:intergenic | 40.0% |
| !! | CTTGTCGATTTCTCATTTGC+AGG | + | chr3.3:84146450-84146469 | MS.gene38722:intron | 40.0% |
| !! | GTTCGGTTTGGTAAATTCCA+AGG | + | chr3.3:84142020-84142039 | MS.gene38722:CDS | 40.0% |
| !! | TAAACAGAAAGGCATTCACC+TGG | - | chr3.3:84147159-84147178 | None:intergenic | 40.0% |
| !! | TTAGGGGATTGACTTGTGAA+TGG | - | chr3.3:84147336-84147355 | None:intergenic | 40.0% |
| !! | TTGGTCTTATGTTTGGGAGA+AGG | + | chr3.3:84142294-84142313 | MS.gene38722:CDS | 40.0% |
| !!! | AATCCGTTCTATGCTGGTTT+TGG | + | chr3.3:84147768-84147787 | MS.gene38722:CDS | 40.0% |
| !!! | CACTTTTTCTACAGCTATGC+TGG | + | chr3.3:84145152-84145171 | MS.gene38722:CDS | 40.0% |
| !!! | GAACTAGGCATGGTGTTTTT+TGG | + | chr3.3:84144745-84144764 | MS.gene38722:intron | 40.0% |
| AAAGCAGTTACTGCATGAGC+AGG | + | chr3.3:84144187-84144206 | MS.gene38722:CDS | 45.0% | |
| ACAAGCAACTCTTCATCTGG+TGG | + | chr3.3:84144889-84144908 | MS.gene38722:CDS | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr3.3:84143151-84143170 | None:intergenic | 45.0% | |
| ACTCTTCATCTGGTGGAAAC+TGG | + | chr3.3:84144896-84144915 | MS.gene38722:CDS | 45.0% | |
| AGAAGAGGTTTCTGTGGTAG+AGG | + | chr3.3:84142490-84142509 | MS.gene38722:CDS | 45.0% | |
| AGAGAGGGAAAAAGTCCATC+GGG | - | chr3.3:84146709-84146728 | None:intergenic | 45.0% | |
| ATGTGTGAGTGATGGTCACT+TGG | + | chr3.3:84147178-84147197 | MS.gene38722:intron | 45.0% | |
| ATTCTCTTCGTCTGAACTCG+AGG | - | chr3.3:84143847-84143866 | None:intergenic | 45.0% | |
| ATTGCCTTCACGGTATAGAG+AGG | - | chr3.3:84146725-84146744 | None:intergenic | 45.0% | |
| CACATAATTCTCGGTCATCC+TGG | - | chr3.3:84143725-84143744 | None:intergenic | 45.0% | |
| CCATTTATTCTCCGCAGTCA+AGG | + | chr3.3:84146094-84146113 | MS.gene38722:CDS | 45.0% | |
| CCTTGACTGCGGAGAATAAA+TGG | - | chr3.3:84146097-84146116 | None:intergenic | 45.0% | |
| CTGGTGGAAACTGGAGAATT+TGG | + | chr3.3:84144905-84144924 | MS.gene38722:CDS | 45.0% | |
| CTTAAGGTTGGAATCCCGTT+GGG | + | chr3.3:84147819-84147838 | MS.gene38722:CDS | 45.0% | |
| CTTCAGGGTACGGAAACTAA+GGG | + | chr3.3:84143492-84143511 | MS.gene38722:intron | 45.0% | |
| CTTGCATTCACTCGTATCTC+AGG | + | chr3.3:84142628-84142647 | MS.gene38722:CDS | 45.0% | |
| GAAATAACAACAGGACCCTC+TGG | - | chr3.3:84146685-84146704 | None:intergenic | 45.0% | |
| GAAGAGGTTTCTGTGGTAGA+GGG | + | chr3.3:84142491-84142510 | MS.gene38722:CDS | 45.0% | |
| GAGTGTAGAAGAGGTTTCTG+TGG | + | chr3.3:84142484-84142503 | MS.gene38722:CDS | 45.0% | |
| GATGCTATCTGTTCGGAAGT+TGG | - | chr3.3:84145096-84145115 | None:intergenic | 45.0% | |
| GATTGCAATCCGTTCTATGC+TGG | + | chr3.3:84147762-84147781 | MS.gene38722:CDS | 45.0% | |
| GCAGCAATTGAGTGTAGAAG+AGG | + | chr3.3:84142475-84142494 | MS.gene38722:CDS | 45.0% | |
| GCGAAAAATGCCAGCCAAAT+GGG | + | chr3.3:84142972-84142991 | MS.gene38722:intron | 45.0% | |
| GTCATAGCTGTTGACCAAGT+TGG | + | chr3.3:84144838-84144857 | MS.gene38722:intron | 45.0% | |
| GTCGTCGTTCAACAACAAGA+CGG | + | chr3.3:84141972-84141991 | MS.gene38722:CDS | 45.0% | |
| TATACCAGCTCTCTTACCAG+GGG | - | chr3.3:84144270-84144289 | None:intergenic | 45.0% | |
| TATCTTGCTCATGGGGAAAC+TGG | + | chr3.3:84142581-84142600 | MS.gene38722:CDS | 45.0% | |
| TCAAGATGGTGATCATGCTG+TGG | + | chr3.3:84142406-84142425 | MS.gene38722:CDS | 45.0% | |
| TCCTACAGGTCAGATGTTCT+TGG | + | chr3.3:84146023-84146042 | MS.gene38722:intron | 45.0% | |
| TCTAAGCGTTCGCGAATACT+TGG | + | chr3.3:84142275-84142294 | MS.gene38722:CDS | 45.0% | |
| TCTAGATCCTGATCTGCTCA+AGG | - | chr3.3:84144938-84144957 | None:intergenic | 45.0% | |
| TCTATGCATGCACTCGTGAA+TGG | + | chr3.3:84148005-84148024 | MS.gene38722:CDS | 45.0% | |
| TGAGATTGCCGCGAATTTGT+TGG | + | chr3.3:84142364-84142383 | MS.gene38722:CDS | 45.0% | |
| TGCAGTTCAATGCCACCAAT+TGG | + | chr3.3:84145738-84145757 | MS.gene38722:intron | 45.0% | |
| TGCGAAAAATGCCAGCCAAA+TGG | + | chr3.3:84142971-84142990 | MS.gene38722:intron | 45.0% | |
| TTACCAAACCGAACGTACCA+TGG | - | chr3.3:84142014-84142033 | None:intergenic | 45.0% | |
| TTGAACGACGACGATATCGA+CGG | - | chr3.3:84141964-84141983 | None:intergenic | 45.0% | |
| TTGCCTTCACGGTATAGAGA+GGG | - | chr3.3:84146724-84146743 | None:intergenic | 45.0% | |
| TTTCCCTCTCTATACCGTGA+AGG | + | chr3.3:84146718-84146737 | MS.gene38722:CDS | 45.0% | |
| ! | AGTCACTTTAGTCCCTGAGT+GGG | - | chr3.3:84143298-84143317 | None:intergenic | 45.0% |
| ! | CATTTCAGGTCATCTTTGCC+AGG | - | chr3.3:84144143-84144162 | None:intergenic | 45.0% |
| ! | GACTACTCTTTTCCCACTCA+GGG | + | chr3.3:84143283-84143302 | MS.gene38722:intron | 45.0% |
| ! | GCATCGTTGAATCTGAAGCA+AGG | + | chr3.3:84145111-84145130 | MS.gene38722:CDS | 45.0% |
| ! | GCTGTTGTAACTGGAAGCAT+TGG | - | chr3.3:84143703-84143722 | None:intergenic | 45.0% |
| ! | GGATGGCAAAGTTTTACCAG+AGG | + | chr3.3:84146666-84146685 | MS.gene38722:intron | 45.0% |
| ! | GTGAATGCAAGACTTGGTCA+TGG | - | chr3.3:84142619-84142638 | None:intergenic | 45.0% |
| ! | TAGTCACTTTAGTCCCTGAG+TGG | - | chr3.3:84143299-84143318 | None:intergenic | 45.0% |
| ! | TGACTACTCTTTTCCCACTC+AGG | + | chr3.3:84143282-84143301 | MS.gene38722:intron | 45.0% |
| !! | GAGCACTGAGAAAAAGCAGT+TGG | - | chr3.3:84146486-84146505 | None:intergenic | 45.0% |
| !! | TAGAACGGATTGCAATCGGA+AGG | - | chr3.3:84147759-84147778 | None:intergenic | 45.0% |
| ACCGAATGGATGAAAGGGAC+CGG | - | chr3.3:84141937-84141956 | None:intergenic | 50.0% | |
| AGAGGGAAAAAGTCCATCGG+GGG | - | chr3.3:84146707-84146726 | None:intergenic | 50.0% | |
| AGGATGGGAAGATTGTAGGG+AGG | + | chr3.3:84142246-84142265 | MS.gene38722:CDS | 50.0% | |
| ATACCAGCTCTCTTACCAGG+GGG | - | chr3.3:84144269-84144288 | None:intergenic | 50.0% | |
| ATCGTGATCTCGGATGTGGA+TGG | + | chr3.3:84145351-84145370 | MS.gene38722:CDS | 50.0% | |
| CAAGGCGTATACACCGTTTC+CGG | + | chr3.3:84141915-84141934 | MS.gene38722:CDS | 50.0% | |
| CAGTTACTGCATGAGCAGGA+AGG | + | chr3.3:84144191-84144210 | MS.gene38722:CDS | 50.0% | |
| CCAACGGGATTCCAACCTTA+AGG | - | chr3.3:84147821-84147840 | None:intergenic | 50.0% | |
| CCATCGGGGGAAATAACAAC+AGG | - | chr3.3:84146694-84146713 | None:intergenic | 50.0% | |
| CCCTACAATCTTCCCATCCT+CGG | - | chr3.3:84142246-84142265 | None:intergenic | 50.0% | |
| CCCTAGAAATGAGGATGCTG+CGG | + | chr3.3:84144010-84144029 | MS.gene38722:CDS | 50.0% | |
| CCGAGGATGGGAAGATTGTA+GGG | + | chr3.3:84142243-84142262 | MS.gene38722:CDS | 50.0% | |
| CCGCAGCATCCTCATTTCTA+GGG | - | chr3.3:84144013-84144032 | None:intergenic | 50.0% | |
| CCTAGAAATGAGGATGCTGC+GGG | + | chr3.3:84144011-84144030 | MS.gene38722:CDS | 50.0% | |
| CCTGATCTGCTCAAGGAGAA+AGG | - | chr3.3:84144931-84144950 | None:intergenic | 50.0% | |
| CCTTAAGGTTGGAATCCCGT+TGG | + | chr3.3:84147818-84147837 | MS.gene38722:CDS | 50.0% | |
| CCTTAGTTTCCGTACCCTGA+AGG | - | chr3.3:84143494-84143513 | None:intergenic | 50.0% | |
| CCTTCAGGGTACGGAAACTA+AGG | + | chr3.3:84143491-84143510 | MS.gene38722:intron | 50.0% | |
| CCTTTCTCCTTGAGCAGATC+AGG | + | chr3.3:84144928-84144947 | MS.gene38722:CDS | 50.0% | |
| CTAGAAATGAGGATGCTGCG+GGG | + | chr3.3:84144012-84144031 | MS.gene38722:CDS | 50.0% | |
| CTATAGACGGGGTACAGTAC+AGG | - | chr3.3:84146376-84146395 | None:intergenic | 50.0% | |
| GACCAGTCAACACCAACCAA+AGG | - | chr3.3:84146059-84146078 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr3.3:84143152-84143171 | None:intergenic | 50.0% | |
| GAGAGGGAAAAAGTCCATCG+GGG | - | chr3.3:84146708-84146727 | None:intergenic | 50.0% | |
| GCCAAGAACATCTGACCTGT+AGG | - | chr3.3:84146027-84146046 | None:intergenic | 50.0% | |
| GTCATCCTGGCTGTTGTAAC+TGG | - | chr3.3:84143712-84143731 | None:intergenic | 50.0% | |
| TAGAAATGAGGATGCTGCGG+GGG | + | chr3.3:84144013-84144032 | MS.gene38722:CDS | 50.0% | |
| TCAACTCCACCACACTCTCT+TGG | + | chr3.3:84143783-84143802 | MS.gene38722:CDS | 50.0% | |
| TCACCATGGTACGTTCGGTT+TGG | + | chr3.3:84142008-84142027 | MS.gene38722:CDS | 50.0% | |
| TCCGAGGATGGGAAGATTGT+AGG | + | chr3.3:84142242-84142261 | MS.gene38722:CDS | 50.0% | |
| TCCGGTCCCTTTCATCCATT+CGG | + | chr3.3:84141933-84141952 | MS.gene38722:CDS | 50.0% | |
| TCGTATCGTGATCTCGGATG+TGG | + | chr3.3:84145347-84145366 | MS.gene38722:CDS | 50.0% | |
| TCTTCGTCTGAACTCGAGGA+CGG | - | chr3.3:84143843-84143862 | None:intergenic | 50.0% | |
| TCTTGGCCAGTTCATGCCTT+TGG | + | chr3.3:84146040-84146059 | MS.gene38722:CDS | 50.0% | |
| TGCTTCCAGTTACAACAGCC+AGG | + | chr3.3:84143704-84143723 | MS.gene38722:CDS | 50.0% | |
| TGGATGAAAGGGACCGGAAA+CGG | - | chr3.3:84141931-84141950 | None:intergenic | 50.0% | |
| TGGTGATCATGCTGTGGTAG+TGG | + | chr3.3:84142412-84142431 | MS.gene38722:CDS | 50.0% | |
| TTTGGGAGAAGGTCTGTGAG+TGG | + | chr3.3:84142305-84142324 | MS.gene38722:CDS | 50.0% | |
| ! | CAATCACCAAGAGAGTGTGG+TGG | - | chr3.3:84143792-84143811 | None:intergenic | 50.0% |
| ! | CACCAACCAAAGGCATGAAC+TGG | - | chr3.3:84146049-84146068 | None:intergenic | 50.0% |
| ! | CGTTGAATCTGAAGCAAGGG+AGG | + | chr3.3:84145115-84145134 | MS.gene38722:CDS | 50.0% |
| !! | CCTGTTGTTATTTCCCCCGA+TGG | + | chr3.3:84146691-84146710 | MS.gene38722:CDS | 50.0% |
| !! | CTGCTCAGAAGTGCTTGTTG+CGG | - | chr3.3:84148039-84148058 | None:intergenic | 50.0% |
| !! | GTGGTAGAGGGTGTTGAAGA+GGG | + | chr3.3:84142503-84142522 | MS.gene38722:CDS | 50.0% |
| !! | GTGGTAGTGGAGAATGAGGA+TGG | + | chr3.3:84142425-84142444 | MS.gene38722:CDS | 50.0% |
| !! | TGCCTTTGGTTGGTGTTGAC+TGG | + | chr3.3:84146054-84146073 | MS.gene38722:CDS | 50.0% |
| !! | TGCTCAGAAGTGCTTGTTGC+GGG | - | chr3.3:84148038-84148057 | None:intergenic | 50.0% |
| !! | TGCTGTGGTAGTGGAGAATG+AGG | + | chr3.3:84142421-84142440 | MS.gene38722:CDS | 50.0% |
| !! | TGTGGTAGAGGGTGTTGAAG+AGG | + | chr3.3:84142502-84142521 | MS.gene38722:CDS | 50.0% |
| AGCTATGCTGGGGAAACAGC+AGG | + | chr3.3:84145164-84145183 | MS.gene38722:CDS | 55.0% | |
| ATGCAAGCGGTGGGGAGATT+AGG | + | chr3.3:84141879-84141898 | MS.gene38722:CDS | 55.0% | |
| CCCGCAGCATCCTCATTTCT+AGG | - | chr3.3:84144014-84144033 | None:intergenic | 55.0% | |
| CGCAACAAGCACTTCTGAGC+AGG | + | chr3.3:84148037-84148056 | MS.gene38722:CDS | 55.0% | |
| GCGCCACCGAATGGATGAAA+GGG | - | chr3.3:84141942-84141961 | None:intergenic | 55.0% | |
| GGCCAGTTCATGCCTTTGGT+TGG | + | chr3.3:84146044-84146063 | MS.gene38722:CDS | 55.0% | |
| GGTCCCTTTCATCCATTCGG+TGG | + | chr3.3:84141936-84141955 | MS.gene38722:CDS | 55.0% | |
| TACCAGCTCTCTTACCAGGG+GGG | - | chr3.3:84144268-84144287 | None:intergenic | 55.0% | |
| TCACTGGACTCGGCATTTCC+TGG | + | chr3.3:84144122-84144141 | MS.gene38722:CDS | 55.0% | |
| TGCAAGCGGTGGGGAGATTA+GGG | + | chr3.3:84141880-84141899 | MS.gene38722:CDS | 55.0% | |
| TGCTCATGGGGAAACTGGTG+AGG | + | chr3.3:84142586-84142605 | MS.gene38722:CDS | 55.0% | |
| ! | CAGCCAAATGGGCTTGACGT+GGG | + | chr3.3:84142983-84143002 | MS.gene38722:intron | 55.0% |
| !! | GCTCAGAAGTGCTTGTTGCG+GGG | - | chr3.3:84148037-84148056 | None:intergenic | 55.0% |
| !! | GGTGTTGACTGGTCACAGAC+TGG | + | chr3.3:84146065-84146084 | MS.gene38722:CDS | 55.0% |
| ACTACGCTGAATCTCCCCCC+TGG | + | chr3.3:84144251-84144270 | MS.gene38722:CDS | 60.0% | |
| AGGATGCTGCGGGGGAAGTT+GGG | + | chr3.3:84144021-84144040 | MS.gene38722:CDS | 60.0% | |
| AGGCCCACGTCAAGCCCATT+TGG | - | chr3.3:84142989-84143008 | None:intergenic | 60.0% | |
| ATATCGACGGCGCCACCGAA+TGG | - | chr3.3:84141951-84141970 | None:intergenic | 60.0% | |
| CCACGTCAAGCCCATTTGGC+TGG | - | chr3.3:84142985-84143004 | None:intergenic | 60.0% | |
| GGCGCCACCGAATGGATGAA+AGG | - | chr3.3:84141943-84141962 | None:intergenic | 60.0% | |
| GGGGAAGTTGGGCAGCATAC+AGG | + | chr3.3:84144032-84144051 | MS.gene38722:CDS | 60.0% | |
| ! | AGCATCTGGGGTCGGATTCC+AGG | + | chr3.3:84147138-84147157 | MS.gene38722:intron | 60.0% |
| ! | CCAGCCAAATGGGCTTGACG+TGG | + | chr3.3:84142982-84143001 | MS.gene38722:intron | 60.0% |
| CTCCCCCCTGGTAAGAGAGC+TGG | + | chr3.3:84144263-84144282 | MS.gene38722:intron | 65.0% | |
| GAGGATGCTGCGGGGGAAGT+TGG | + | chr3.3:84144020-84144039 | MS.gene38722:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84141879 | 84148064 | 84141879 | ID=MS.gene38722 |
| chr3.3 | mRNA | 84141879 | 84148064 | 84141879 | ID=MS.gene38722.t1;Parent=MS.gene38722 |
| chr3.3 | exon | 84141879 | 84142649 | 84141879 | ID=MS.gene38722.t1.exon1;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84141879 | 84142649 | 84141879 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84143498 | 84144272 | 84143498 | ID=MS.gene38722.t1.exon2;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84143498 | 84144272 | 84143498 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84144878 | 84145185 | 84144878 | ID=MS.gene38722.t1.exon3;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84144878 | 84145185 | 84144878 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84145312 | 84145385 | 84145312 | ID=MS.gene38722.t1.exon4;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84145312 | 84145385 | 84145312 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84146031 | 84146115 | 84146031 | ID=MS.gene38722.t1.exon5;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84146031 | 84146115 | 84146031 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84146472 | 84146558 | 84146472 | ID=MS.gene38722.t1.exon6;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84146472 | 84146558 | 84146472 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84146667 | 84146739 | 84146667 | ID=MS.gene38722.t1.exon7;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84146667 | 84146739 | 84146667 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84147024 | 84147067 | 84147024 | ID=MS.gene38722.t1.exon8;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84147024 | 84147067 | 84147024 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84147738 | 84147866 | 84147738 | ID=MS.gene38722.t1.exon9;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84147738 | 84147866 | 84147738 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| chr3.3 | exon | 84147960 | 84148064 | 84147960 | ID=MS.gene38722.t1.exon10;Parent=MS.gene38722.t1 |
| chr3.3 | CDS | 84147960 | 84148064 | 84147960 | ID=cds.MS.gene38722.t1;Parent=MS.gene38722.t1 |
| Gene Sequence |
| Protein sequence |
