Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030153.t1 | XP_003609873.1 | 100 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 1.00E-141 | 512.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030153.t1 | Q9LRP1 | 84.5 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.5e-117 | 423.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030153.t1 | G7JQ41 | 100.0 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 7.5e-142 | 512.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030153 | MS.gene011609 | PPI |
| MS.gene030153 | MS.gene61249 | PPI |
| MS.gene030153 | MS.gene46386 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030153.t1 | MTR_4g123910 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| MS.gene030153.t1 | MTR_2g045960 | 88.679 | 265 | 30 | 0 | 1 | 265 | 1 | 265 | 1.68e-167 | 464 |
| MS.gene030153.t1 | MTR_4g099140 | 64.202 | 257 | 87 | 2 | 7 | 261 | 7 | 260 | 7.14e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030153.t1 | AT3G17440 | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.59e-156 | 436 |
| MS.gene030153.t1 | AT1G48240 | 83.333 | 264 | 43 | 1 | 1 | 263 | 1 | 264 | 2.10e-154 | 431 |
| MS.gene030153.t1 | AT3G17440 | 83.568 | 213 | 34 | 1 | 1 | 212 | 1 | 213 | 9.04e-126 | 357 |
| MS.gene030153.t1 | AT1G48240 | 84.038 | 213 | 33 | 1 | 52 | 263 | 1 | 213 | 1.82e-122 | 348 |
| MS.gene030153.t1 | AT2G35190 | 67.954 | 259 | 76 | 3 | 7 | 261 | 7 | 262 | 3.65e-111 | 321 |
Find 67 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAATCTTATCCAGCTTC+TGG | 0.274677 | 8.3:-5423521 | None:intergenic |
| ATCCCAACAACAAAGATATT+AGG | 0.293546 | 8.3:+5427075 | MS.gene030153:CDS |
| AGTTGCTTGTTCACTTCTTC+GGG | 0.302974 | 8.3:-5424296 | None:intergenic |
| GAGTTGCTTGTTCACTTCTT+CGG | 0.321882 | 8.3:-5424297 | None:intergenic |
| TTTGCAGTCCCTCATCTTCC+CGG | 0.331240 | 8.3:-5423580 | None:intergenic |
| CAGCTGAGTACTTTGTCTAT+TGG | 0.333441 | 8.3:-5423547 | None:intergenic |
| CCTTCAAGGTAGAAGCAGTT+TGG | 0.343816 | 8.3:-5426380 | None:intergenic |
| TCCCAACAACAAAGATATTA+GGG | 0.359712 | 8.3:+5427076 | MS.gene030153:CDS |
| CTTCAAGGTAGAAGCAGTTT+GGG | 0.360070 | 8.3:-5426379 | None:intergenic |
| ATCCCTAATATCTTTGTTGT+TGG | 0.373848 | 8.3:-5427078 | None:intergenic |
| CAAACTTACTTGGCCCTTCA+AGG | 0.377735 | 8.3:-5426394 | None:intergenic |
| CCAAACTGCTTCTACCTTGA+AGG | 0.383146 | 8.3:+5426380 | MS.gene030153:CDS |
| TCCCTAATATCTTTGTTGTT+GGG | 0.383563 | 8.3:-5427077 | None:intergenic |
| TCCCAACTTGTTAAGGAGAT+TGG | 0.395927 | 8.3:+5426562 | MS.gene030153:CDS |
| TCATACCTTCACGACAATAA+TGG | 0.396104 | 8.3:-5426736 | None:intergenic |
| AAAAGCCTCCTTGAGGGAAC+TGG | 0.407527 | 8.3:-5427119 | None:intergenic |
| GAAGGCCTCCCAACTTGTTA+AGG | 0.410294 | 8.3:+5426555 | MS.gene030153:CDS |
| AAAGATATTAGGGATATTCC+AGG | 0.415143 | 8.3:+5427086 | MS.gene030153:CDS |
| AATCAAGAACTTGTCAATGC+TGG | 0.416592 | 8.3:+5426207 | MS.gene030153:CDS |
| AATCATGCAGACTGAACAAA+TGG | 0.425940 | 8.3:+5426489 | MS.gene030153:intron |
| GGAACTGGAGGCGCCAATCC+TGG | 0.433221 | 8.3:-5427104 | None:intergenic |
| TGTTAAGGAGATTGGTAGAC+AGG | 0.437254 | 8.3:+5426570 | MS.gene030153:CDS |
| ACCAATCTCCTTAACAAGTT+GGG | 0.449301 | 8.3:-5426563 | None:intergenic |
| CAGAAATGGCTTCCAGAAGC+TGG | 0.449482 | 8.3:+5423509 | MS.gene030153:intron |
| TGCCAATTGAACATTTCCTT+CGG | 0.451709 | 8.3:-5425055 | None:intergenic |
| CATGGATCTGTTCGAGCTGA+GGG | 0.453043 | 8.3:-5422511 | None:intergenic |
| AGCCGAAGGAAATGTTCAAT+TGG | 0.469264 | 8.3:+5425053 | MS.gene030153:CDS |
| GATCGTGAAATTAAAGATGA+AGG | 0.472497 | 8.3:+5424263 | MS.gene030153:CDS |
| GGAAATGTTCAATTGGCATC+AGG | 0.483291 | 8.3:+5425060 | MS.gene030153:CDS |
| TACCAATCTCCTTAACAAGT+TGG | 0.487013 | 8.3:-5426564 | None:intergenic |
| TATTAGGGATATTCCAGGAT+TGG | 0.491096 | 8.3:+5427091 | MS.gene030153:CDS |
| ATCAAGAACTTGTCAATGCT+GGG | 0.492269 | 8.3:+5426208 | MS.gene030153:CDS |
| CAATAGACAAAGTACTCAGC+TGG | 0.497315 | 8.3:+5423548 | MS.gene030153:CDS |
| GTACATCAAACAATTGAAGT+TGG | 0.510767 | 8.3:+5426354 | MS.gene030153:CDS |
| GGAAGATGAGGGACTGCAAA+AGG | 0.516525 | 8.3:+5423583 | MS.gene030153:CDS |
| CATCTTCAAGTTGGAAGCCA+TGG | 0.518612 | 8.3:-5422486 | None:intergenic |
| ACTCAGCTGGAGGAACTCAC+CGG | 0.523198 | 8.3:+5423561 | MS.gene030153:CDS |
| GAAATTAAAGATGAAGGTGC+AGG | 0.526092 | 8.3:+5424269 | MS.gene030153:CDS |
| GGCTATTGAGAGATCTAAGC+AGG | 0.527773 | 8.3:+5426257 | MS.gene030153:CDS |
| CTGAGGGGTCATCTTCAAGT+TGG | 0.529082 | 8.3:-5422495 | None:intergenic |
| CCATGGATCTGTTCGAGCTG+AGG | 0.533024 | 8.3:-5422512 | None:intergenic |
| ACGTACAAAAGCCTCCTTGA+GGG | 0.543026 | 8.3:-5427125 | None:intergenic |
| CAATGACGAAAAGCAATCAA+TGG | 0.543601 | 8.3:+5424319 | MS.gene030153:CDS |
| TTTCTGTTTCTTATCGTCTG+TGG | 0.544072 | 8.3:+5426705 | MS.gene030153:CDS |
| AACAGGTACATGAATACGAT+TGG | 0.551437 | 8.3:+5424979 | MS.gene030153:intron |
| AAGATGCATACGCGAGGGCA+CGG | 0.552215 | 8.3:-5422553 | None:intergenic |
| GCTTAGATCTCTCAATAGCC+TGG | 0.553529 | 8.3:-5426254 | None:intergenic |
| CAAACTGCTTCTACCTTGAA+GGG | 0.570444 | 8.3:+5426381 | MS.gene030153:CDS |
| AGGAACTCACCGGGAAGATG+AGG | 0.575887 | 8.3:+5423571 | MS.gene030153:CDS |
| TGGCGCCTCCAGTTCCCTCA+AGG | 0.584416 | 8.3:+5427111 | MS.gene030153:CDS |
| CGCCTCCAGTTCCCTCAAGG+AGG | 0.588015 | 8.3:+5427114 | MS.gene030153:CDS |
| CAAGGAGCTAAACTCATATG+TGG | 0.596320 | 8.3:+5424701 | MS.gene030153:CDS |
| GGAACTCACCGGGAAGATGA+GGG | 0.597027 | 8.3:+5423572 | MS.gene030153:CDS |
| AGCCTCCTTGAGGGAACTGG+AGG | 0.604127 | 8.3:-5427116 | None:intergenic |
| CCTCAGCTCGAACAGATCCA+TGG | 0.604752 | 8.3:+5422512 | MS.gene030153:CDS |
| CTCAGCTGGAGGAACTCACC+GGG | 0.605565 | 8.3:+5423562 | MS.gene030153:CDS |
| GATTGCCATTATTGTCGTGA+AGG | 0.622761 | 8.3:+5426731 | MS.gene030153:CDS |
| ATCATGCAGACTGAACAAAT+GGG | 0.622906 | 8.3:+5426490 | MS.gene030153:intron |
| GCAAGTGAATCTACAGCCGA+AGG | 0.626899 | 8.3:+5425039 | MS.gene030153:CDS |
| GACAATGGATGAGACTGACC+AGG | 0.634633 | 8.3:+5426236 | MS.gene030153:CDS |
| AATCTCCTTAACAAGTTGGG+AGG | 0.641193 | 8.3:-5426560 | None:intergenic |
| CAATGCTGGGATGAAGACAA+TGG | 0.665195 | 8.3:+5426221 | MS.gene030153:CDS |
| TAGACAAAGTACTCAGCTGG+AGG | 0.671294 | 8.3:+5423551 | MS.gene030153:CDS |
| TACGTACAAAAGCCTCCTTG+AGG | 0.702572 | 8.3:-5427126 | None:intergenic |
| ATGGATCTGTTCGAGCTGAG+GGG | 0.705029 | 8.3:-5422510 | None:intergenic |
| AGATGTCACGAATTTCACCA+TGG | 0.723900 | 8.3:-5422529 | None:intergenic |
| AATCAAGCTCATTAACAATG+CGG | 0.728134 | 8.3:-5426513 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTCTATTTATATATA+AGG | - | chr8.3:5424910-5424929 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAGTTGATAAAA+AGG | - | chr8.3:5426854-5426873 | None:intergenic | 10.0% |
| !!! | TTTCTCATTTTATTTATTTT+GGG | + | chr8.3:5425890-5425909 | MS.gene030153:intron | 10.0% |
| !!! | TTTTCTCATTTTATTTATTT+TGG | + | chr8.3:5425889-5425908 | MS.gene030153:intron | 10.0% |
| !! | ATAAAATTATTAGAGCAAAT+TGG | - | chr8.3:5426821-5426840 | None:intergenic | 15.0% |
| !! | GAATTGATTAATAATAATGT+GGG | + | chr8.3:5423934-5423953 | MS.gene030153:intron | 15.0% |
| !! | TATATATATAACAAACACAA+TGG | - | chr8.3:5424565-5424584 | None:intergenic | 15.0% |
| !!! | AAATAGAAGTTTTATTCTTT+TGG | + | chr8.3:5424917-5424936 | MS.gene030153:intron | 15.0% |
| !!! | AAATTTGATAGTTGTTTTTT+GGG | + | chr8.3:5424030-5424049 | MS.gene030153:intron | 15.0% |
| !!! | TAAATTTGATAGTTGTTTTT+TGG | + | chr8.3:5424029-5424048 | MS.gene030153:intron | 15.0% |
| !!! | TCAACTATTTTAAATAACTT+TGG | + | chr8.3:5426859-5426878 | MS.gene030153:intron | 15.0% |
| !! | ACATTATTCTACTTAAGAAA+AGG | + | chr8.3:5426886-5426905 | MS.gene030153:intron | 20.0% |
| !! | AGAGAATATATCAACAAATT+AGG | - | chr8.3:5426785-5426804 | None:intergenic | 20.0% |
| !! | ATTTAGTAGTGAAAAACTAA+AGG | - | chr8.3:5423862-5423881 | None:intergenic | 20.0% |
| !! | CATAAACAAAACTTCTATAA+TGG | + | chr8.3:5423884-5423903 | MS.gene030153:intron | 20.0% |
| !! | CATTATTATTAATCAATTCC+TGG | - | chr8.3:5423933-5423952 | None:intergenic | 20.0% |
| !! | CTAAAATATTCTATATAGAG+CGG | - | chr8.3:5424004-5424023 | None:intergenic | 20.0% |
| !! | GATATATAAATCAACAAAGT+TGG | + | chr8.3:5422788-5422807 | MS.gene030153:intron | 20.0% |
| !! | GGAATTGATTAATAATAATG+TGG | + | chr8.3:5423933-5423952 | MS.gene030153:intron | 20.0% |
| !! | TAAAATAAGATAAATGGTGT+GGG | - | chr8.3:5426314-5426333 | None:intergenic | 20.0% |
| !! | TAAAATATTCTATATAGAGC+GGG | - | chr8.3:5424003-5424022 | None:intergenic | 20.0% |
| !! | TAAGAACTTATATGCTTATA+AGG | - | chr8.3:5423381-5423400 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATAAATGGTG+TGG | - | chr8.3:5426315-5426334 | None:intergenic | 20.0% |
| !! | TTTAGTAGTGAAAAACTAAA+GGG | - | chr8.3:5423861-5423880 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCAATAAAGA+AGG | + | chr8.3:5426537-5426556 | MS.gene030153:CDS | 20.0% |
| !!! | AGAACGTTTTTACTTAATTA+AGG | + | chr8.3:5422945-5422964 | MS.gene030153:intron | 20.0% |
| !!! | ATGTTTCTATTAATGTAATC+AGG | + | chr8.3:5424225-5424244 | MS.gene030153:intron | 20.0% |
| !!! | ATTTTTTCAAACATCAATGT+CGG | + | chr8.3:5424110-5424129 | MS.gene030153:intron | 20.0% |
| !!! | CTTAGATTTGAAATTCAAAA+CGG | + | chr8.3:5425582-5425601 | MS.gene030153:intron | 20.0% |
| !!! | CTTTAATTTCCTTGTTTATA+TGG | + | chr8.3:5426596-5426615 | MS.gene030153:intron | 20.0% |
| !!! | GTTTTAATTAAGAAGTGATA+GGG | - | chr8.3:5423329-5423348 | None:intergenic | 20.0% |
| !!! | TACATTTCATGATTTCTTTT+TGG | + | chr8.3:5424168-5424187 | MS.gene030153:intron | 20.0% |
| !!! | TCCTTAAAAGTGTTATAAAA+AGG | + | chr8.3:5425717-5425736 | MS.gene030153:intron | 20.0% |
| !!! | TCCTTTTTATAACACTTTTA+AGG | - | chr8.3:5425721-5425740 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAAGAAGTGAT+AGG | - | chr8.3:5423330-5423349 | None:intergenic | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+AGG | - | chr8.3:5425602-5425583 | None:intergenic | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+GGG | + | chr8.3:5425583-5425602 | MS.gene030153:intron | 20.0% |
| !!! | TTCTTTTTGGAATTTGTTAA+TGG | + | chr8.3:5424181-5424200 | MS.gene030153:intron | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | + | chr8.3:5425769-5425788 | MS.gene030153:intron | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | - | chr8.3:5425788-5425769 | None:intergenic | 20.0% |
| ! | AAAATATTCTATATAGAGCG+GGG | - | chr8.3:5424002-5424021 | None:intergenic | 25.0% |
| ! | AAATATTTGGCCAGAATATT+CGG | + | chr8.3:5425210-5425229 | MS.gene030153:intron | 25.0% |
| ! | AACATGACCAAGAAAAAAAA+AGG | - | chr8.3:5424358-5424377 | None:intergenic | 25.0% |
| ! | ACATGACCAAGAAAAAAAAA+GGG | - | chr8.3:5424357-5424376 | None:intergenic | 25.0% |
| ! | ATTATTAATCAATTCCTGGA+AGG | - | chr8.3:5423929-5423948 | None:intergenic | 25.0% |
| ! | ATTCTACAACAGAAATATAG+TGG | - | chr8.3:5426012-5426031 | None:intergenic | 25.0% |
| ! | CAATTCAAATCAAACTTACT+TGG | - | chr8.3:5426407-5426426 | None:intergenic | 25.0% |
| ! | CACTAAATATCATAAACAAG+AGG | + | chr8.3:5423698-5423717 | MS.gene030153:intron | 25.0% |
| ! | CAGGGTTAAAATAAGATAAA+TGG | - | chr8.3:5426320-5426339 | None:intergenic | 25.0% |
| ! | GATATTTAGTGGTAAACAAA+GGG | - | chr8.3:5423689-5423708 | None:intergenic | 25.0% |
| ! | GTTGTTATAGTTGAAAGTTT+AGG | + | chr8.3:5422757-5422776 | MS.gene030153:intron | 25.0% |
| ! | TCAATAACGACTTAAACAAT+AGG | - | chr8.3:5423409-5423428 | None:intergenic | 25.0% |
| ! | TGAATGCAATATCAAAACTT+GGG | - | chr8.3:5425367-5425386 | None:intergenic | 25.0% |
| ! | TGATATTTAGTGGTAAACAA+AGG | - | chr8.3:5423690-5423709 | None:intergenic | 25.0% |
| ! | TTAGTAGTGAAAAACTAAAG+GGG | - | chr8.3:5423860-5423879 | None:intergenic | 25.0% |
| !! | AAAACTTGAACTTTTTGACA+TGG | + | chr8.3:5425008-5425027 | MS.gene030153:CDS | 25.0% |
| !! | AAACTTGAACTTTTTGACAT+GGG | + | chr8.3:5425009-5425028 | MS.gene030153:CDS | 25.0% |
| !! | AGTTATGTAGTTCAACATTT+TGG | + | chr8.3:5422826-5422845 | MS.gene030153:intron | 25.0% |
| !! | CGCTCTATATAGAATATTTT+AGG | + | chr8.3:5424002-5424021 | MS.gene030153:intron | 25.0% |
| !! | CTCTTGTTTATGATATTTAG+TGG | - | chr8.3:5423700-5423719 | None:intergenic | 25.0% |
| !! | GAGACTAAATTTTGCTTTAT+TGG | - | chr8.3:5424888-5424907 | None:intergenic | 25.0% |
| !! | TTGACTACACATTTTATAGA+CGG | + | chr8.3:5424081-5424100 | MS.gene030153:intron | 25.0% |
| !!! | AATTTGTAAAAGCATTGATG+AGG | - | chr8.3:5422625-5422644 | None:intergenic | 25.0% |
| !!! | ATGATTTTCTCATGTTGTTT+TGG | - | chr8.3:5425460-5425479 | None:intergenic | 25.0% |
| !!! | TACTTAATTAAGGACTAGTT+TGG | + | chr8.3:5422955-5422974 | MS.gene030153:intron | 25.0% |
| !!! | TCATGTTGTTTTGGATTTTT+GGG | - | chr8.3:5425451-5425470 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTGGTCATGT+TGG | + | chr8.3:5424357-5424376 | MS.gene030153:intron | 25.0% |
| AAAGATATTAGGGATATTCC+AGG | + | chr8.3:5427086-5427105 | MS.gene030153:CDS | 30.0% | |
| AAGAAAGTAACACAAAGTGT+TGG | - | chr8.3:5423139-5423158 | None:intergenic | 30.0% | |
| AAGTCGTTATTGATACATGT+TGG | + | chr8.3:5423416-5423435 | MS.gene030153:intron | 30.0% | |
| AATCAAGCTCATTAACAATG+CGG | - | chr8.3:5426516-5426535 | None:intergenic | 30.0% | |
| ACCGCCAAATATTCATATAA+GGG | + | chr8.3:5425095-5425114 | MS.gene030153:intron | 30.0% | |
| ATAATGTGGGAAACAACAAA+AGG | + | chr8.3:5423947-5423966 | MS.gene030153:intron | 30.0% | |
| ATCCCAACAACAAAGATATT+AGG | + | chr8.3:5427075-5427094 | MS.gene030153:CDS | 30.0% | |
| ATGTCAACTACAAATTCCAT+TGG | - | chr8.3:5425952-5425971 | None:intergenic | 30.0% | |
| CAAATTAAGTGATCACCATA+TGG | + | chr8.3:5424508-5424527 | MS.gene030153:intron | 30.0% | |
| GAAAAAAGTTTCAGAATACG+AGG | + | chr8.3:5424534-5424553 | MS.gene030153:intron | 30.0% | |
| GAATATTCTGGCCAAATATT+TGG | - | chr8.3:5425211-5425230 | None:intergenic | 30.0% | |
| GAATTGAGTATGCTATAAGA+AGG | + | chr8.3:5426421-5426440 | MS.gene030153:intron | 30.0% | |
| GACGAAATTCTTATTCTCAA+AGG | + | chr8.3:5425556-5425575 | MS.gene030153:intron | 30.0% | |
| GATCGTGAAATTAAAGATGA+AGG | + | chr8.3:5424263-5424282 | MS.gene030153:CDS | 30.0% | |
| GTACATCAAACAATTGAAGT+TGG | + | chr8.3:5426354-5426373 | MS.gene030153:CDS | 30.0% | |
| GTGAATGCAATATCAAAACT+TGG | - | chr8.3:5425368-5425387 | None:intergenic | 30.0% | |
| TAATGTGGGAAACAACAAAA+GGG | + | chr8.3:5423948-5423967 | MS.gene030153:intron | 30.0% | |
| TATTTGCAATAGCATACTTC+AGG | + | chr8.3:5426056-5426075 | MS.gene030153:intron | 30.0% | |
| TCATTAAAGGAGTTGCAAAA+AGG | - | chr8.3:5425633-5425652 | None:intergenic | 30.0% | |
| TCCCAACAACAAAGATATTA+GGG | + | chr8.3:5427076-5427095 | MS.gene030153:CDS | 30.0% | |
| TTATCAATTAGTACTAACGC+TGG | - | chr8.3:5423208-5423227 | None:intergenic | 30.0% | |
| TTATCACTTGGATGATAAAC+AGG | + | chr8.3:5424962-5424981 | MS.gene030153:intron | 30.0% | |
| TTTAGTATCTGATTAGGTCA+TGG | - | chr8.3:5425344-5425363 | None:intergenic | 30.0% | |
| ! | AATACATTTTCTCAAGCCAA+TGG | + | chr8.3:5425933-5425952 | MS.gene030153:intron | 30.0% |
| ! | ATCCCTAATATCTTTGTTGT+TGG | - | chr8.3:5427081-5427100 | None:intergenic | 30.0% |
| ! | ATCGTGATTTTTGTTGACAT+TGG | + | chr8.3:5422675-5422694 | MS.gene030153:intron | 30.0% |
| ! | ATGGTGATCACTTAATTTGA+TGG | - | chr8.3:5424507-5424526 | None:intergenic | 30.0% |
| ! | TCTTGATTTGACATTTCTGT+AGG | - | chr8.3:5426195-5426214 | None:intergenic | 30.0% |
| ! | TGACTACACATTTTATAGAC+GGG | + | chr8.3:5424082-5424101 | MS.gene030153:intron | 30.0% |
| ! | TTTTAACCCTGTCAAAATGT+AGG | + | chr8.3:5426329-5426348 | MS.gene030153:intron | 30.0% |
| !! | ACACAAAGTGTTGGTATAAT+AGG | - | chr8.3:5423130-5423149 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGGTATAATA+GGG | - | chr8.3:5423129-5423148 | None:intergenic | 30.0% |
| !! | GAATTTGTTAATGGCATTCT+TGG | + | chr8.3:5424190-5424209 | MS.gene030153:intron | 30.0% |
| !! | GACGAAAATTTGATTTGAGA+GGG | - | chr8.3:5422708-5422727 | None:intergenic | 30.0% |
| !! | TATTCTTTTGGCTAGTTGAA+AGG | + | chr8.3:5424929-5424948 | MS.gene030153:intron | 30.0% |
| !! | TCCCTAATATCTTTGTTGTT+GGG | - | chr8.3:5427080-5427099 | None:intergenic | 30.0% |
| !! | TGACGAAAATTTGATTTGAG+AGG | - | chr8.3:5422709-5422728 | None:intergenic | 30.0% |
| !! | TTCATTTTTCTTGCAGATCA+AGG | + | chr8.3:5424683-5424702 | MS.gene030153:intron | 30.0% |
| !!! | CATGTTGTTTTGGATTTTTG+GGG | - | chr8.3:5425450-5425469 | None:intergenic | 30.0% |
| !!! | CTCATGTTGTTTTGGATTTT+TGG | - | chr8.3:5425452-5425471 | None:intergenic | 30.0% |
| !!! | GAAACTTTTTTCTGACCATA+TGG | - | chr8.3:5424526-5424545 | None:intergenic | 30.0% |
| !!! | TCAGAACCCTTTTTTTTTCT+TGG | + | chr8.3:5424348-5424367 | MS.gene030153:intron | 30.0% |
| AAACCACACAAAAATAGCCT+AGG | - | chr8.3:5426120-5426139 | None:intergenic | 35.0% | |
| AAACCCAGACAAAATCTAAG+AGG | + | chr8.3:5425666-5425685 | MS.gene030153:intron | 35.0% | |
| AAAGTTTCAGAATACGAGGA+TGG | + | chr8.3:5424538-5424557 | MS.gene030153:intron | 35.0% | |
| AAATATTTGGCCTCAAGGTT+CGG | - | chr8.3:5425198-5425217 | None:intergenic | 35.0% | |
| AACAGGTACATGAATACGAT+TGG | + | chr8.3:5424979-5424998 | MS.gene030153:intron | 35.0% | |
| AATCAAGAACTTGTCAATGC+TGG | + | chr8.3:5426207-5426226 | MS.gene030153:CDS | 35.0% | |
| AATCATGCAGACTGAACAAA+TGG | + | chr8.3:5426489-5426508 | MS.gene030153:intron | 35.0% | |
| AATTAAGAAGTGATAGGGCA+TGG | - | chr8.3:5423324-5423343 | None:intergenic | 35.0% | |
| ACAATAACGTCTCTAACCAT+TGG | - | chr8.3:5423733-5423752 | None:intergenic | 35.0% | |
| ACCAATCTCCTTAACAAGTT+GGG | - | chr8.3:5426566-5426585 | None:intergenic | 35.0% | |
| ACCATGAACATGTATATCAG+TGG | - | chr8.3:5422854-5422873 | None:intergenic | 35.0% | |
| AGGTTGACATATTGAAGTGT+AGG | + | chr8.3:5422901-5422920 | MS.gene030153:intron | 35.0% | |
| AGTTTGATGTTTGCTTCTTG+AGG | + | chr8.3:5425836-5425855 | MS.gene030153:intron | 35.0% | |
| ATCAAGAACTTGTCAATGCT+GGG | + | chr8.3:5426208-5426227 | MS.gene030153:CDS | 35.0% | |
| ATCATGCAGACTGAACAAAT+GGG | + | chr8.3:5426490-5426509 | MS.gene030153:intron | 35.0% | |
| ATTTGATGTTTGCTCCTTTG+AGG | - | chr8.3:5425509-5425528 | None:intergenic | 35.0% | |
| CAATAACGTCTCTAACCATT+GGG | - | chr8.3:5423732-5423751 | None:intergenic | 35.0% | |
| CAATGACGAAAAGCAATCAA+TGG | + | chr8.3:5424319-5424338 | MS.gene030153:CDS | 35.0% | |
| CACGCTAAGCAAATCATTAA+AGG | - | chr8.3:5425646-5425665 | None:intergenic | 35.0% | |
| CTTGGGTTTAGTATCTGATT+AGG | - | chr8.3:5425350-5425369 | None:intergenic | 35.0% | |
| CTTTAATCTTATCCAGCTTC+TGG | - | chr8.3:5423524-5423543 | None:intergenic | 35.0% | |
| GACCGCCAAATATTCATATA+AGG | + | chr8.3:5425094-5425113 | MS.gene030153:intron | 35.0% | |
| GACGAAATCCTAATTCACAA+AGG | - | chr8.3:5425795-5425814 | None:intergenic | 35.0% | |
| GCAAAAGATGATTTCACAAC+TGG | - | chr8.3:5423774-5423793 | None:intergenic | 35.0% | |
| GCCCTTATATGAATATTTGG+CGG | - | chr8.3:5425099-5425118 | None:intergenic | 35.0% | |
| TACAAGAATCTTCACTCTGA+AGG | + | chr8.3:5425534-5425553 | MS.gene030153:intron | 35.0% | |
| TACACTTCAATATGTCAACC+TGG | - | chr8.3:5422902-5422921 | None:intergenic | 35.0% | |
| TACAGCAGTCCATATAAACA+AGG | - | chr8.3:5426608-5426627 | None:intergenic | 35.0% | |
| TACCAATCTCCTTAACAAGT+TGG | - | chr8.3:5426567-5426586 | None:intergenic | 35.0% | |
| TATTAGGGATATTCCAGGAT+TGG | + | chr8.3:5427091-5427110 | MS.gene030153:CDS | 35.0% | |
| TATTGATACATGTTGGAGTG+TGG | + | chr8.3:5423423-5423442 | MS.gene030153:intron | 35.0% | |
| TATTTCTTCCAAACCTGTCA+TGG | + | chr8.3:5426626-5426645 | MS.gene030153:intron | 35.0% | |
| TCATACCTTCACGACAATAA+TGG | - | chr8.3:5426739-5426758 | None:intergenic | 35.0% | |
| TGATAAGCATCCAAGTACTT+GGG | + | chr8.3:5423222-5423241 | MS.gene030153:intron | 35.0% | |
| TGCCAATTGAACATTTCCTT+CGG | - | chr8.3:5425058-5425077 | None:intergenic | 35.0% | |
| TGTGCACATAAACATGCAAT+AGG | - | chr8.3:5426960-5426979 | None:intergenic | 35.0% | |
| TTAATCAATTCCTGGAAGGT+TGG | - | chr8.3:5423925-5423944 | None:intergenic | 35.0% | |
| TTGATAAGCATCCAAGTACT+TGG | + | chr8.3:5423221-5423240 | MS.gene030153:intron | 35.0% | |
| ! | AAAGCCTCTTAGATTTTGTC+TGG | - | chr8.3:5425673-5425692 | None:intergenic | 35.0% |
| ! | AAATCTAAGAGGCTTTTGTG+TGG | + | chr8.3:5425677-5425696 | MS.gene030153:intron | 35.0% |
| ! | AAGCCTCTTAGATTTTGTCT+GGG | - | chr8.3:5425672-5425691 | None:intergenic | 35.0% |
| ! | AATCTAAGAGGCTTTTGTGT+GGG | + | chr8.3:5425678-5425697 | MS.gene030153:intron | 35.0% |
| ! | ATTTTCATCCCAAAATCCCA+CGG | - | chr8.3:5425412-5425431 | None:intergenic | 35.0% |
| ! | GAAATTAAAGATGAAGGTGC+AGG | + | chr8.3:5424269-5424288 | MS.gene030153:CDS | 35.0% |
| ! | GTGATTTTTGTTGACATTGG+AGG | + | chr8.3:5422678-5422697 | MS.gene030153:intron | 35.0% |
| ! | TTTCTGTTTCTTATCGTCTG+TGG | + | chr8.3:5426705-5426724 | MS.gene030153:CDS | 35.0% |
| !! | CACTTTGTGTTACTTTCTTG+TGG | + | chr8.3:5423140-5423159 | MS.gene030153:intron | 35.0% |
| !! | GCACTTTTTGCATACAGAAA+TGG | + | chr8.3:5423495-5423514 | MS.gene030153:intron | 35.0% |
| !! | GTAAACAAAGGGTGTTTGTT+TGG | - | chr8.3:5423678-5423697 | None:intergenic | 35.0% |
| !! | GTACAACCTACATTTTGACA+GGG | - | chr8.3:5426338-5426357 | None:intergenic | 35.0% |
| !! | TGTACAACCTACATTTTGAC+AGG | - | chr8.3:5426339-5426358 | None:intergenic | 35.0% |
| !!! | ACCTCGTCAAAGTTTTGAAA+GGG | + | chr8.3:5424393-5424412 | MS.gene030153:intron | 35.0% |
| !!! | TACCTCGTCAAAGTTTTGAA+AGG | + | chr8.3:5424392-5424411 | MS.gene030153:intron | 35.0% |
| !!! | TGTTTTTTGGGTTATCGTAC+TGG | + | chr8.3:5424042-5424061 | MS.gene030153:intron | 35.0% |
| AACTCGTTACACGCAGAAAA+AGG | - | chr8.3:5424460-5424479 | None:intergenic | 40.0% | |
| AAGTCCCACATCAAGTAGTA+TGG | - | chr8.3:5423279-5423298 | None:intergenic | 40.0% | |
| AATATTTGGCCTCAAGGTTC+GGG | - | chr8.3:5425197-5425216 | None:intergenic | 40.0% | |
| ACCCTTTCAAAACTTTGACG+AGG | - | chr8.3:5424397-5424416 | None:intergenic | 40.0% | |
| ACGAGAAATACCAATTCCGT+AGG | + | chr8.3:5424811-5424830 | MS.gene030153:intron | 40.0% | |
| ACGCTCTGATAGGTAACTTA+GGG | + | chr8.3:5425256-5425275 | MS.gene030153:intron | 40.0% | |
| ACTTAGTTCCATGACAGGTT+TGG | - | chr8.3:5426637-5426656 | None:intergenic | 40.0% | |
| AGAAATACCAATTCCGTAGG+AGG | + | chr8.3:5424814-5424833 | MS.gene030153:intron | 40.0% | |
| AGAGACGTTATTGTGTGACT+AGG | + | chr8.3:5423739-5423758 | MS.gene030153:intron | 40.0% | |
| AGATGTCACGAATTTCACCA+TGG | - | chr8.3:5422532-5422551 | None:intergenic | 40.0% | |
| AGCCGAAGGAAATGTTCAAT+TGG | + | chr8.3:5425053-5425072 | MS.gene030153:CDS | 40.0% | |
| AGTCCCACATCAAGTAGTAT+GGG | - | chr8.3:5423278-5423297 | None:intergenic | 40.0% | |
| AGTTGCTTGTTCACTTCTTC+GGG | - | chr8.3:5424299-5424318 | None:intergenic | 40.0% | |
| ATCAAGTAGTATGGGATGCT+CGG | - | chr8.3:5423270-5423289 | None:intergenic | 40.0% | |
| ATCATAAACAAGAGGAGCCT+TGG | + | chr8.3:5423706-5423725 | MS.gene030153:intron | 40.0% | |
| ATCTGATTAGGTCATGGCTT+GGG | - | chr8.3:5425338-5425357 | None:intergenic | 40.0% | |
| CAAACTGCTTCTACCTTGAA+GGG | + | chr8.3:5426381-5426400 | MS.gene030153:CDS | 40.0% | |
| CAAGGAGCTAAACTCATATG+TGG | + | chr8.3:5424701-5424720 | MS.gene030153:CDS | 40.0% | |
| CAGCTGAGTACTTTGTCTAT+TGG | - | chr8.3:5423550-5423569 | None:intergenic | 40.0% | |
| CATCCCATACTACTTGATGT+GGG | + | chr8.3:5423272-5423291 | MS.gene030153:intron | 40.0% | |
| CCAGAATATTCGGATATAGG+GGG | + | chr8.3:5425220-5425239 | MS.gene030153:intron | 40.0% | |
| CGGGCCCTTATATGAATATT+TGG | - | chr8.3:5425102-5425121 | None:intergenic | 40.0% | |
| CTAAGAGGCCTTTGTGAATT+AGG | + | chr8.3:5425784-5425803 | MS.gene030153:intron | 40.0% | |
| CTTCAAGGTAGAAGCAGTTT+GGG | - | chr8.3:5426382-5426401 | None:intergenic | 40.0% | |
| GAACCTTGAGGCCAAATATT+TGG | + | chr8.3:5425197-5425216 | MS.gene030153:intron | 40.0% | |
| GAGTGTCAATCCACAATACA+AGG | - | chr8.3:5424430-5424449 | None:intergenic | 40.0% | |
| GAGTTGCTTGTTCACTTCTT+CGG | - | chr8.3:5424300-5424319 | None:intergenic | 40.0% | |
| GATAAGCATCCAAGTACTTG+GGG | + | chr8.3:5423223-5423242 | MS.gene030153:intron | 40.0% | |
| GATTGCCATTATTGTCGTGA+AGG | + | chr8.3:5426731-5426750 | MS.gene030153:CDS | 40.0% | |
| GCAATCACTATTCACTAGCA+CGG | - | chr8.3:5426938-5426957 | None:intergenic | 40.0% | |
| GCATTCACTGCAAGTACATT+TGG | + | chr8.3:5425380-5425399 | MS.gene030153:intron | 40.0% | |
| GCCACTGATATACATGTTCA+TGG | + | chr8.3:5422850-5422869 | MS.gene030153:intron | 40.0% | |
| GCCAGAATATTCGGATATAG+GGG | + | chr8.3:5425219-5425238 | MS.gene030153:intron | 40.0% | |
| GGAAATGTTCAATTGGCATC+AGG | + | chr8.3:5425060-5425079 | MS.gene030153:CDS | 40.0% | |
| GGCCAGAATATTCGGATATA+GGG | + | chr8.3:5425218-5425237 | MS.gene030153:intron | 40.0% | |
| GTGTAGGTAGCTAAGACTAA+TGG | + | chr8.3:5422917-5422936 | MS.gene030153:intron | 40.0% | |
| TACGCTCTGATAGGTAACTT+AGG | + | chr8.3:5425255-5425274 | MS.gene030153:intron | 40.0% | |
| TATCTGATTAGGTCATGGCT+TGG | - | chr8.3:5425339-5425358 | None:intergenic | 40.0% | |
| TCAAGATCCTCCTTGTATTG+TGG | + | chr8.3:5424417-5424436 | MS.gene030153:intron | 40.0% | |
| TCTGTAGCAACCTGATAACA+GGG | - | chr8.3:5426669-5426688 | None:intergenic | 40.0% | |
| TGGCCAGAATATTCGGATAT+AGG | + | chr8.3:5425217-5425236 | MS.gene030153:intron | 40.0% | |
| TGTCAATCCACAATACAAGG+AGG | - | chr8.3:5424427-5424446 | None:intergenic | 40.0% | |
| TGTTAAGGAGATTGGTAGAC+AGG | + | chr8.3:5426570-5426589 | MS.gene030153:CDS | 40.0% | |
| TGTTGGTATAATAGGGACTC+GGG | - | chr8.3:5423122-5423141 | None:intergenic | 40.0% | |
| TTATTGTGTGACTAGGTCAC+AGG | + | chr8.3:5423746-5423765 | MS.gene030153:intron | 40.0% | |
| TTGCTTCTTGAGGAAGAAGA+GGG | + | chr8.3:5425846-5425865 | MS.gene030153:intron | 40.0% | |
| TTGGCATCAGGTAACATGTT+TGG | + | chr8.3:5425072-5425091 | MS.gene030153:intron | 40.0% | |
| TTTGCTTCTTGAGGAAGAAG+AGG | + | chr8.3:5425845-5425864 | MS.gene030153:intron | 40.0% | |
| ! | AATCTCCTTAACAAGTTGGG+AGG | - | chr8.3:5426563-5426582 | None:intergenic | 40.0% |
| ! | CAATAGACAAAGTACTCAGC+TGG | + | chr8.3:5423548-5423567 | MS.gene030153:CDS | 40.0% |
| ! | CTTTTCCGTGCATCCTTTTT+GGG | + | chr8.3:5426086-5426105 | MS.gene030153:intron | 40.0% |
| ! | GGACGGTTGATATTATCACT+TGG | + | chr8.3:5424950-5424969 | MS.gene030153:intron | 40.0% |
| ! | GTGTTGGTATAATAGGGACT+CGG | - | chr8.3:5423123-5423142 | None:intergenic | 40.0% |
| ! | TAAGAAAAGGTGCGAGAACT+TGG | + | chr8.3:5426899-5426918 | MS.gene030153:intron | 40.0% |
| ! | TCTTTTCCGTGCATCCTTTT+TGG | + | chr8.3:5426085-5426104 | MS.gene030153:intron | 40.0% |
| ! | TTAGTACTAACGCTGGTTGT+CGG | - | chr8.3:5423201-5423220 | None:intergenic | 40.0% |
| ! | TTTTCCGTGCATCCTTTTTG+GGG | + | chr8.3:5426087-5426106 | MS.gene030153:intron | 40.0% |
| !! | CTTTTGGCTAGTTGAAAGGA+CGG | + | chr8.3:5424933-5424952 | MS.gene030153:intron | 40.0% |
| !! | TCCCAACTTGTTAAGGAGAT+TGG | + | chr8.3:5426562-5426581 | MS.gene030153:CDS | 40.0% |
| !!! | GGTGCTATTATAGCCCTTTT+GGG | - | chr8.3:5425303-5425322 | None:intergenic | 40.0% |
| AAAGCTGAACATGCCTCCTA+CGG | - | chr8.3:5424830-5424849 | None:intergenic | 45.0% | |
| AACACCCTCTTCTTCCTCAA+AGG | + | chr8.3:5425492-5425511 | MS.gene030153:intron | 45.0% | |
| AAGAAGTGATAGGGCATGGT+TGG | - | chr8.3:5423320-5423339 | None:intergenic | 45.0% | |
| AAGGGCTATAATAGCACCCT+TGG | + | chr8.3:5425305-5425324 | MS.gene030153:intron | 45.0% | |
| AAGTCTCACATGGAGTGGTA+TGG | - | chr8.3:5423079-5423098 | None:intergenic | 45.0% | |
| ACGTACAAAAGCCTCCTTGA+GGG | - | chr8.3:5427128-5427147 | None:intergenic | 45.0% | |
| AGAAGTGATAGGGCATGGTT+GGG | - | chr8.3:5423319-5423338 | None:intergenic | 45.0% | |
| AGGGCATGGTTGGGTATTAT+GGG | - | chr8.3:5423310-5423329 | None:intergenic | 45.0% | |
| AGGGCTATAATAGCACCCTT+GGG | + | chr8.3:5425306-5425325 | MS.gene030153:intron | 45.0% | |
| AGTCTCACATGGAGTGGTAT+GGG | - | chr8.3:5423078-5423097 | None:intergenic | 45.0% | |
| ATGATGAAGATGCATACGCG+AGG | - | chr8.3:5422562-5422581 | None:intergenic | 45.0% | |
| CAAACTTACTTGGCCCTTCA+AGG | - | chr8.3:5426397-5426416 | None:intergenic | 45.0% | |
| CAATGCTGGGATGAAGACAA+TGG | + | chr8.3:5426221-5426240 | MS.gene030153:CDS | 45.0% | |
| CCAAACTGCTTCTACCTTGA+AGG | + | chr8.3:5426380-5426399 | MS.gene030153:CDS | 45.0% | |
| CCCCCTATATCCGAATATTC+TGG | - | chr8.3:5425223-5425242 | None:intergenic | 45.0% | |
| CCTTCAAGGTAGAAGCAGTT+TGG | - | chr8.3:5426383-5426402 | None:intergenic | 45.0% | |
| CTGTAGCAACCTGATAACAG+GGG | - | chr8.3:5426668-5426687 | None:intergenic | 45.0% | |
| GAAAAACTAAAGGGGCAGCA+GGG | - | chr8.3:5423852-5423871 | None:intergenic | 45.0% | |
| GCATCCCATACTACTTGATG+TGG | + | chr8.3:5423271-5423290 | MS.gene030153:intron | 45.0% | |
| GCTTAGATCTCTCAATAGCC+TGG | - | chr8.3:5426257-5426276 | None:intergenic | 45.0% | |
| GGACAACTTAGTTCCATGAC+AGG | - | chr8.3:5426642-5426661 | None:intergenic | 45.0% | |
| GGCTATTGAGAGATCTAAGC+AGG | + | chr8.3:5426257-5426276 | MS.gene030153:CDS | 45.0% | |
| GGTTTGGGGGGATAAGAAAA+GGG | - | chr8.3:5425168-5425187 | None:intergenic | 45.0% | |
| GTCTGTAGCAACCTGATAAC+AGG | - | chr8.3:5426670-5426689 | None:intergenic | 45.0% | |
| GTGCGAGAACTTGGATTTCA+TGG | + | chr8.3:5426908-5426927 | MS.gene030153:intron | 45.0% | |
| GTTTGGGGGGATAAGAAAAG+GGG | - | chr8.3:5425167-5425186 | None:intergenic | 45.0% | |
| TACCACTCCATGTGAGACTT+AGG | + | chr8.3:5423079-5423098 | MS.gene030153:intron | 45.0% | |
| TACGTACAAAAGCCTCCTTG+AGG | - | chr8.3:5427129-5427148 | None:intergenic | 45.0% | |
| TAGGGCATGGTTGGGTATTA+TGG | - | chr8.3:5423311-5423330 | None:intergenic | 45.0% | |
| TGAAAAACTAAAGGGGCAGC+AGG | - | chr8.3:5423853-5423872 | None:intergenic | 45.0% | |
| TGATGAAGATGCATACGCGA+GGG | - | chr8.3:5422561-5422580 | None:intergenic | 45.0% | |
| TGGCAAGATTCGACTCAAAC+AGG | - | chr8.3:5423826-5423845 | None:intergenic | 45.0% | |
| TGGCCAAATATTTGGCCTCA+AGG | - | chr8.3:5425203-5425222 | None:intergenic | 45.0% | |
| TGTTTGAGTCGAATCTTGCC+AGG | + | chr8.3:5423825-5423844 | MS.gene030153:intron | 45.0% | |
| TTGTCCTTACCCCTGTTATC+AGG | + | chr8.3:5426656-5426675 | MS.gene030153:intron | 45.0% | |
| TTTGGGGGGATAAGAAAAGG+GGG | - | chr8.3:5425166-5425185 | None:intergenic | 45.0% | |
| ! | AAGCAACCACCAAAGCACTT+GGG | + | chr8.3:5423015-5423034 | MS.gene030153:intron | 45.0% |
| ! | AAGGTTCGGGATTGATGGTT+TGG | - | chr8.3:5425184-5425203 | None:intergenic | 45.0% |
| ! | AGGTTCGGGATTGATGGTTT+GGG | - | chr8.3:5425183-5425202 | None:intergenic | 45.0% |
| ! | CAAGGAGGCTTTTGTACGTA+CGG | + | chr8.3:5427129-5427148 | MS.gene030153:CDS | 45.0% |
| ! | GAACTTTTTGACATGGGAGC+TGG | + | chr8.3:5425015-5425034 | MS.gene030153:CDS | 45.0% |
| ! | GAGGGAGTACGTAAGATGTT+TGG | - | chr8.3:5423049-5423068 | None:intergenic | 45.0% |
| ! | TAAGCAACCACCAAAGCACT+TGG | + | chr8.3:5423014-5423033 | MS.gene030153:intron | 45.0% |
| ! | TACGCGTTTTACGCTCTGAT+AGG | + | chr8.3:5425246-5425265 | MS.gene030153:intron | 45.0% |
| ! | TAGACAAAGTACTCAGCTGG+AGG | + | chr8.3:5423551-5423570 | MS.gene030153:CDS | 45.0% |
| ! | TGCTCCTTTGAGGAAGAAGA+GGG | - | chr8.3:5425499-5425518 | None:intergenic | 45.0% |
| ! | TGGTTTGGGGGGATAAGAAA+AGG | - | chr8.3:5425169-5425188 | None:intergenic | 45.0% |
| ! | TTGCTCCTTTGAGGAAGAAG+AGG | - | chr8.3:5425500-5425519 | None:intergenic | 45.0% |
| !!! | GGGTGCTATTATAGCCCTTT+TGG | - | chr8.3:5425304-5425323 | None:intergenic | 45.0% |
| AAAAGCCTCCTTGAGGGAAC+TGG | - | chr8.3:5427122-5427141 | None:intergenic | 50.0% | |
| AAATGGTGTGGGCGCAATGA+AGG | - | chr8.3:5426303-5426322 | None:intergenic | 50.0% | |
| ACATCTCATGCCAACCTTCC+AGG | + | chr8.3:5423912-5423931 | MS.gene030153:intron | 50.0% | |
| ACCATCAATCCCGAACCTTG+AGG | + | chr8.3:5425185-5425204 | MS.gene030153:intron | 50.0% | |
| ATGGATCTGTTCGAGCTGAG+GGG | - | chr8.3:5422513-5422532 | None:intergenic | 50.0% | |
| CAGAAATGGCTTCCAGAAGC+TGG | + | chr8.3:5423509-5423528 | MS.gene030153:intron | 50.0% | |
| CAGACCCCAAAAAGGATGCA+CGG | - | chr8.3:5426094-5426113 | None:intergenic | 50.0% | |
| CATGGATCTGTTCGAGCTGA+GGG | - | chr8.3:5422514-5422533 | None:intergenic | 50.0% | |
| CTGAGGGGTCATCTTCAAGT+TGG | - | chr8.3:5422498-5422517 | None:intergenic | 50.0% | |
| CTGGTTGTCACTGCACAACA+AGG | - | chr8.3:5422883-5422902 | None:intergenic | 50.0% | |
| GAACATGCCTCCTACGGAAT+TGG | - | chr8.3:5424824-5424843 | None:intergenic | 50.0% | |
| GACAATGGATGAGACTGACC+AGG | + | chr8.3:5426236-5426255 | MS.gene030153:CDS | 50.0% | |
| GAGTGGTATGGGATGCTTGA+GGG | - | chr8.3:5423067-5423086 | None:intergenic | 50.0% | |
| GCAACCTGATAACAGGGGTA+AGG | - | chr8.3:5426663-5426682 | None:intergenic | 50.0% | |
| GCAAGTGAATCTACAGCCGA+AGG | + | chr8.3:5425039-5425058 | MS.gene030153:CDS | 50.0% | |
| GCATGGTTGGGTATTATGGG+GGG | - | chr8.3:5423307-5423326 | None:intergenic | 50.0% | |
| GCGTGGAAGAATGCCCAAAA+GGG | + | chr8.3:5425287-5425306 | MS.gene030153:intron | 50.0% | |
| GGAAGATGAGGGACTGCAAA+AGG | + | chr8.3:5423583-5423602 | MS.gene030153:CDS | 50.0% | |
| GGCATGGTTGGGTATTATGG+GGG | - | chr8.3:5423308-5423327 | None:intergenic | 50.0% | |
| GGGATTGTTCCCCAAGTACT+TGG | - | chr8.3:5423235-5423254 | None:intergenic | 50.0% | |
| GGGCATGGTTGGGTATTATG+GGG | - | chr8.3:5423309-5423328 | None:intergenic | 50.0% | |
| GTTCTTTCCCCCAAGTGCTT+TGG | - | chr8.3:5423027-5423046 | None:intergenic | 50.0% | |
| TATAGAGCGGGGTTGCATGT+TGG | - | chr8.3:5423991-5424010 | None:intergenic | 50.0% | |
| TCATCCCAAAATCCCACGGT+GGG | - | chr8.3:5425408-5425427 | None:intergenic | 50.0% | |
| TTCATCCCAAAATCCCACGG+TGG | - | chr8.3:5425409-5425428 | None:intergenic | 50.0% | |
| TTGGGGGGATAAGAAAAGGG+GGG | - | chr8.3:5425165-5425184 | None:intergenic | 50.0% | |
| TTTGCAGTCCCTCATCTTCC+CGG | - | chr8.3:5423583-5423602 | None:intergenic | 50.0% | |
| ! | AGCAACCACCAAAGCACTTG+GGG | + | chr8.3:5423016-5423035 | MS.gene030153:intron | 50.0% |
| ! | AGGCTTTTGTACGTACGGAC+TGG | + | chr8.3:5427134-5427153 | MS.gene030153:CDS | 50.0% |
| ! | ATGGCTTGGGAATGATCCCA+AGG | - | chr8.3:5425325-5425344 | None:intergenic | 50.0% |
| ! | CTTGTTGTGCAGTGACAACC+AGG | + | chr8.3:5422881-5422900 | MS.gene030153:intron | 50.0% |
| ! | GGTTCGGGATTGATGGTTTG+GGG | - | chr8.3:5425182-5425201 | None:intergenic | 50.0% |
| ! | GTTCGGGATTGATGGTTTGG+GGG | - | chr8.3:5425181-5425200 | None:intergenic | 50.0% |
| ! | TGGCTTGGGAATGATCCCAA+GGG | - | chr8.3:5425324-5425343 | None:intergenic | 50.0% |
| ! | TTCGGGATTGATGGTTTGGG+GGG | - | chr8.3:5425180-5425199 | None:intergenic | 50.0% |
| !! | AACGCTGGTTGTCGGTGTTT+TGG | - | chr8.3:5423193-5423212 | None:intergenic | 50.0% |
| !! | GAAGGCCTCCCAACTTGTTA+AGG | + | chr8.3:5426555-5426574 | MS.gene030153:CDS | 50.0% |
| !! | TGAGGAAGAAGAGGGTGTTG+TGG | + | chr8.3:5425854-5425873 | MS.gene030153:intron | 50.0% |
| !!! | GGGCCTAGGCTATTTTTGTG+TGG | + | chr8.3:5426114-5426133 | MS.gene030153:intron | 50.0% |
| !!! | GTGCATCCTTTTTGGGGTCT+GGG | + | chr8.3:5426093-5426112 | MS.gene030153:intron | 50.0% |
| !!! | GTTTTGGAGAAGACCACCGA+CGG | - | chr8.3:5423177-5423196 | None:intergenic | 50.0% |
| !!! | TGCATCCTTTTTGGGGTCTG+GGG | + | chr8.3:5426094-5426113 | MS.gene030153:intron | 50.0% |
| AACTTAGGGAGTGAGTCGCG+TGG | + | chr8.3:5425270-5425289 | MS.gene030153:intron | 55.0% | |
| AAGATGCATACGCGAGGGCA+CGG | - | chr8.3:5422556-5422575 | None:intergenic | 55.0% | |
| ACTCAGCTGGAGGAACTCAC+CGG | + | chr8.3:5423561-5423580 | MS.gene030153:CDS | 55.0% | |
| AGGAACTCACCGGGAAGATG+AGG | + | chr8.3:5423571-5423590 | MS.gene030153:CDS | 55.0% | |
| ATGCTCGGCGAAACACTCAG+GGG | - | chr8.3:5423255-5423274 | None:intergenic | 55.0% | |
| ATGTGAGACTTAGGCGTCCC+AGG | + | chr8.3:5423088-5423107 | MS.gene030153:intron | 55.0% | |
| CCATGGATCTGTTCGAGCTG+AGG | - | chr8.3:5422515-5422534 | None:intergenic | 55.0% | |
| CCTCAGCTCGAACAGATCCA+TGG | + | chr8.3:5422512-5422531 | MS.gene030153:CDS | 55.0% | |
| CGCCTAAGTCTCACATGGAG+TGG | - | chr8.3:5423084-5423103 | None:intergenic | 55.0% | |
| CGCGTGGAAGAATGCCCAAA+AGG | + | chr8.3:5425286-5425305 | MS.gene030153:intron | 55.0% | |
| CGTCTCTAACCATTGGGCCA+AGG | - | chr8.3:5423726-5423745 | None:intergenic | 55.0% | |
| CTTTCCCCCAAGTGCTTTGG+TGG | - | chr8.3:5423024-5423043 | None:intergenic | 55.0% | |
| GATGCTCGGCGAAACACTCA+GGG | - | chr8.3:5423256-5423275 | None:intergenic | 55.0% | |
| GCCTCAAGGTTCGGGATTGA+TGG | - | chr8.3:5425189-5425208 | None:intergenic | 55.0% | |
| GGAACTCACCGGGAAGATGA+GGG | + | chr8.3:5423572-5423591 | MS.gene030153:CDS | 55.0% | |
| GGAGTGGTATGGGATGCTTG+AGG | - | chr8.3:5423068-5423087 | None:intergenic | 55.0% | |
| GTGCCCTTGCTTAGGGCTAA+CGG | - | chr8.3:5425122-5425141 | None:intergenic | 55.0% | |
| TGCCCTTGCTTAGGGCTAAC+GGG | - | chr8.3:5425121-5425140 | None:intergenic | 55.0% | |
| TGGGACGCCTAAGTCTCACA+TGG | - | chr8.3:5423089-5423108 | None:intergenic | 55.0% | |
| TGTGGCTCAAAACCCTCCGT+CGG | + | chr8.3:5423158-5423177 | MS.gene030153:intron | 55.0% | |
| ! | GCAACCACCAAAGCACTTGG+GGG | + | chr8.3:5423017-5423036 | MS.gene030153:intron | 55.0% |
| !!! | CGTGCATCCTTTTTGGGGTC+TGG | + | chr8.3:5426092-5426111 | MS.gene030153:intron | 55.0% |
| AGACTTAGGCGTCCCAGGAC+AGG | + | chr8.3:5423093-5423112 | MS.gene030153:intron | 60.0% | |
| AGCCTCCTTGAGGGAACTGG+AGG | - | chr8.3:5427119-5427138 | None:intergenic | 60.0% | |
| AGTACATTTGGCGCCCACCG+TGG | + | chr8.3:5425392-5425411 | MS.gene030153:intron | 60.0% | |
| CAAGAGGAGCCTTGGCCCAA+TGG | + | chr8.3:5423714-5423733 | MS.gene030153:intron | 60.0% | |
| CTAGGCCCCAGACCCCAAAA+AGG | - | chr8.3:5426102-5426121 | None:intergenic | 60.0% | |
| CTCAGCTGGAGGAACTCACC+GGG | + | chr8.3:5423562-5423581 | MS.gene030153:CDS | 60.0% | |
| GGATGCTCGGCGAAACACTC+AGG | - | chr8.3:5423257-5423276 | None:intergenic | 60.0% | |
| GGCACCCCCATGACAGAATG+GGG | + | chr8.3:5425137-5425156 | MS.gene030153:intron | 60.0% | |
| GGCCCGTTAGCCCTAAGCAA+GGG | + | chr8.3:5425116-5425135 | MS.gene030153:intron | 60.0% | |
| GGGCACCCCCATGACAGAAT+GGG | + | chr8.3:5425136-5425155 | MS.gene030153:intron | 60.0% | |
| GTACATTTGGCGCCCACCGT+GGG | + | chr8.3:5425393-5425412 | MS.gene030153:intron | 60.0% | |
| TGGAGAAGACCACCGACGGA+GGG | - | chr8.3:5423173-5423192 | None:intergenic | 60.0% | |
| TTGGAGAAGACCACCGACGG+AGG | - | chr8.3:5423174-5423193 | None:intergenic | 60.0% | |
| ! | AGGGCACCCCCATGACAGAA+TGG | + | chr8.3:5425135-5425154 | MS.gene030153:intron | 60.0% |
| !! | CATGGGGGTGCCCTTGCTTA+GGG | - | chr8.3:5425129-5425148 | None:intergenic | 60.0% |
| !! | TCATGGGGGTGCCCTTGCTT+AGG | - | chr8.3:5425130-5425149 | None:intergenic | 60.0% |
| !!! | CTTTTTGGGGTCTGGGGCCT+AGG | + | chr8.3:5426100-5426119 | MS.gene030153:intron | 60.0% |
| CGCCTCCAGTTCCCTCAAGG+AGG | + | chr8.3:5427114-5427133 | MS.gene030153:CDS | 65.0% | |
| CTAAAGGGGCAGCAGGGTCC+TGG | - | chr8.3:5423846-5423865 | None:intergenic | 65.0% | |
| GGACTCGGGCATCCTGTCCT+GGG | - | chr8.3:5423108-5423127 | None:intergenic | 65.0% | |
| GGCGCCCCATTCTGTCATGG+GGG | - | chr8.3:5425144-5425163 | None:intergenic | 65.0% | |
| GGCTCAAAACCCTCCGTCGG+TGG | + | chr8.3:5423161-5423180 | MS.gene030153:intron | 65.0% | |
| GGGCCCGTTAGCCCTAAGCA+AGG | + | chr8.3:5425115-5425134 | MS.gene030153:intron | 65.0% | |
| GGGCGCCCCATTCTGTCATG+GGG | - | chr8.3:5425145-5425164 | None:intergenic | 65.0% | |
| TGGCGCCTCCAGTTCCCTCA+AGG | + | chr8.3:5427111-5427130 | MS.gene030153:CDS | 65.0% | |
| ! | GGCGCCCACCGTGGGATTTT+GGG | + | chr8.3:5425401-5425420 | MS.gene030153:intron | 65.0% |
| ! | GGGGCGCCCCATTCTGTCAT+GGG | - | chr8.3:5425146-5425165 | None:intergenic | 65.0% |
| ! | TGGCGCCCACCGTGGGATTT+TGG | + | chr8.3:5425400-5425419 | MS.gene030153:intron | 65.0% |
| !! | GGAACTGGAGGCGCCAATCC+TGG | - | chr8.3:5427107-5427126 | None:intergenic | 65.0% |
| GGGACTCGGGCATCCTGTCC+TGG | - | chr8.3:5423109-5423128 | None:intergenic | 70.0% | |
| !! | GGGGGCGCCCCATTCTGTCA+TGG | - | chr8.3:5425147-5425166 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 5422488 | 5427172 | 5422488 | ID=MS.gene030153 |
| chr8.3 | mRNA | 5422488 | 5427172 | 5422488 | ID=MS.gene030153.t1;Parent=MS.gene030153 |
| chr8.3 | exon | 5422488 | 5422564 | 5422488 | ID=MS.gene030153.t1.exon1;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5422488 | 5422564 | 5422488 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5423512 | 5423604 | 5423512 | ID=MS.gene030153.t1.exon2;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5423512 | 5423604 | 5423512 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5424247 | 5424340 | 5424247 | ID=MS.gene030153.t1.exon3;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5424247 | 5424340 | 5424247 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5424699 | 5424736 | 5424699 | ID=MS.gene030153.t1.exon4;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5424699 | 5424736 | 5424699 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5424984 | 5425081 | 5424984 | ID=MS.gene030153.t1.exon5;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5424984 | 5425081 | 5424984 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5426199 | 5426278 | 5426199 | ID=MS.gene030153.t1.exon6;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5426199 | 5426278 | 5426199 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5426351 | 5426407 | 5426351 | ID=MS.gene030153.t1.exon7;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5426351 | 5426407 | 5426351 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5426499 | 5426591 | 5426499 | ID=MS.gene030153.t1.exon8;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5426499 | 5426591 | 5426499 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5426678 | 5426752 | 5426678 | ID=MS.gene030153.t1.exon9;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5426678 | 5426752 | 5426678 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| chr8.3 | exon | 5427068 | 5427172 | 5427068 | ID=MS.gene030153.t1.exon10;Parent=MS.gene030153.t1 |
| chr8.3 | CDS | 5427068 | 5427172 | 5427068 | ID=cds.MS.gene030153.t1;Parent=MS.gene030153.t1 |
| Gene Sequence |
| Protein sequence |
