Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030590.t1 | XP_003630311.1 | 93.8 | 694 | 40 | 2 | 1 | 693 | 1 | 692 | 0.00E+00 | 1276.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030590.t1 | Q9US48 | 22.8 | 600 | 335 | 19 | 18 | 607 | 9 | 490 | 5.4e-21 | 104.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030590.t1 | A0A072TTT7 | 95.0 | 682 | 33 | 1 | 1 | 681 | 1 | 682 | 0.0e+00 | 1276.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030590 | MS.gene72395 | PPI |
| MS.gene045787 | MS.gene030590 | PPI |
| MS.gene81030 | MS.gene030590 | PPI |
| MS.gene72394 | MS.gene030590 | PPI |
| MS.gene83241 | MS.gene030590 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030590.t1 | MTR_8g094170 | 95.015 | 682 | 33 | 1 | 1 | 681 | 1 | 682 | 0.0 | 1330 |
| MS.gene030590.t1 | MTR_8g094170 | 93.669 | 695 | 41 | 2 | 1 | 694 | 1 | 693 | 0.0 | 1327 |
| MS.gene030590.t1 | MTR_8g094170 | 93.543 | 635 | 38 | 2 | 61 | 694 | 1 | 633 | 0.0 | 1213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030590.t1 | AT5G19130 | 55.079 | 699 | 281 | 9 | 4 | 694 | 15 | 688 | 0.0 | 719 |
| MS.gene030590.t1 | AT5G19130 | 54.986 | 702 | 280 | 9 | 4 | 694 | 15 | 691 | 0.0 | 718 |
Find 170 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATATTGTAAATTATT+TGG | 0.021800 | 4.2:-8729680 | MS.gene030590:CDS |
| CATGATTCCATTTGCATTAC+TGG | 0.124102 | 4.2:-8728548 | MS.gene030590:CDS |
| AGTATTGCTATTAATGAAAT+TGG | 0.189677 | 4.2:-8729865 | MS.gene030590:CDS |
| TTAAATCCTCAATGGAAATT+TGG | 0.195961 | 4.2:-8729544 | MS.gene030590:CDS |
| GGTATTTGATATAGGAAATA+TGG | 0.198745 | 4.2:+8728355 | None:intergenic |
| GATGGAGCAGCTTCGAAAAT+TGG | 0.207135 | 4.2:+8728247 | None:intergenic |
| TCTCCTGGACCTACTTTCTT+TGG | 0.208451 | 4.2:+8730081 | None:intergenic |
| AGCTTGCTTTGTTTCGTATC+TGG | 0.220560 | 4.2:-8731913 | MS.gene030590:CDS |
| ATGAATGACCAAAACATTTC+TGG | 0.227137 | 4.2:+8728405 | None:intergenic |
| GCTAGCCCATTCGCCTTTCT+TGG | 0.243438 | 4.2:+8728219 | None:intergenic |
| CACTTCTTTCACGGGTTACT+TGG | 0.248796 | 4.2:-8730023 | MS.gene030590:CDS |
| GTACTAATGTTGGTGATTAT+TGG | 0.257131 | 4.2:-8727946 | MS.gene030590:CDS |
| GGGTGGTATATTTGAATCTC+TGG | 0.260256 | 4.2:-8729584 | MS.gene030590:CDS |
| ATCAATATTGTAAATTATTT+GGG | 0.276089 | 4.2:-8729679 | MS.gene030590:CDS |
| CCTACTTTCTTTGGATTGTA+TGG | 0.283312 | 4.2:+8730090 | None:intergenic |
| TTTGTTGTTGGGGTGGAATT+AGG | 0.285242 | 4.2:+8728334 | None:intergenic |
| GCCACTTGTAATCTTGCTTT+AGG | 0.295266 | 4.2:-8728031 | MS.gene030590:CDS |
| AACTTTGCTACAGCTGAAAT+CGG | 0.303038 | 4.2:-8728139 | MS.gene030590:CDS |
| TCCAGGTGGCTTAATACTTT+GGG | 0.320194 | 4.2:-8729604 | MS.gene030590:CDS |
| TATCATTCCTCCCAGGGTTT+GGG | 0.325743 | 4.2:-8729370 | MS.gene030590:intron |
| TATTCTGATAGAAATTTATA+CGG | 0.328318 | 4.2:-8729832 | MS.gene030590:CDS |
| TGGAATTAGGTATTTGATAT+AGG | 0.328975 | 4.2:+8728347 | None:intergenic |
| CGTACGATTGGGCGAATTCT+CGG | 0.337039 | 4.2:+8732077 | None:intergenic |
| CGGTGTTCTCACTTCTTTCA+CGG | 0.338719 | 4.2:-8730032 | MS.gene030590:CDS |
| GAACTCAGCCAGAAATGTTT+TGG | 0.344404 | 4.2:-8728413 | MS.gene030590:CDS |
| CAAGTCATTGACGAATTTGT+TGG | 0.346427 | 4.2:+8731492 | None:intergenic |
| GTCCAGGTGGCTTAATACTT+TGG | 0.355990 | 4.2:-8729605 | MS.gene030590:CDS |
| CGCTTGGCTAAGAGAATATC+AGG | 0.358140 | 4.2:-8729938 | MS.gene030590:CDS |
| ATCGTTGGGCATTGCTTACT+CGG | 0.364806 | 4.2:-8730052 | MS.gene030590:CDS |
| CAGGGTTTGGGTGTTCCCAC+TGG | 0.367001 | 4.2:-8729358 | MS.gene030590:CDS |
| ATGTCAGCTTCATGGAAAAC+AGG | 0.372718 | 4.2:+8729913 | None:intergenic |
| TTGAAGTCAGCCACAAATCT+TGG | 0.373675 | 4.2:-8728444 | MS.gene030590:CDS |
| TATTAACTATGTCAGCTTCA+TGG | 0.374925 | 4.2:+8729905 | None:intergenic |
| TCACTTGGAATCAACATTGC+TGG | 0.382539 | 4.2:-8730165 | MS.gene030590:CDS |
| TTTGAGACTATACCCGAATC+AGG | 0.382697 | 4.2:+8730204 | None:intergenic |
| TTTGGTCCCTGATCTTGTAT+TGG | 0.388757 | 4.2:-8727668 | MS.gene030590:CDS |
| TTCGCCCAATCGTACGGTTA+GGG | 0.397770 | 4.2:-8732070 | MS.gene030590:CDS |
| ACTTTGCTACAGCTGAAATC+GGG | 0.398136 | 4.2:-8728138 | MS.gene030590:CDS |
| ATTCGCCCAATCGTACGGTT+AGG | 0.400527 | 4.2:-8732071 | MS.gene030590:CDS |
| TAGTCATCCAATACAAGATC+AGG | 0.401641 | 4.2:+8727661 | None:intergenic |
| ACGCTCAATAAACAACCTTC+TGG | 0.402878 | 4.2:-8728641 | MS.gene030590:CDS |
| ATCTGCCCATTTGACGCCTC+AGG | 0.403801 | 4.2:+8729718 | None:intergenic |
| ACAATATCAACCGCTTTCAT+TGG | 0.407962 | 4.2:-8728184 | MS.gene030590:CDS |
| ATCTACCCTGAGGCGTCAAA+TGG | 0.408841 | 4.2:-8729724 | MS.gene030590:CDS |
| ATGTTGGTGATTATTGGAAC+TGG | 0.413859 | 4.2:-8727940 | MS.gene030590:CDS |
| GGTCGAGCCATCAGACAAAT+CGG | 0.416688 | 4.2:+8728100 | None:intergenic |
| CACACAATGAAGTTTGTTGT+TGG | 0.418716 | 4.2:+8728322 | None:intergenic |
| TCTTTCACGGGTTACTTGGC+TGG | 0.419390 | 4.2:-8730019 | MS.gene030590:CDS |
| TGTTGAGGGAGCTGCTACAC+TGG | 0.425827 | 4.2:-8729503 | MS.gene030590:CDS |
| CTAGCCCATTCGCCTTTCTT+GGG | 0.428462 | 4.2:+8728220 | None:intergenic |
| CCAGGAGAGGCTTTATCGTT+GGG | 0.433632 | 4.2:-8730066 | MS.gene030590:CDS |
| ACACAATGAAGTTTGTTGTT+GGG | 0.440704 | 4.2:+8728323 | None:intergenic |
| TCCGAAAATGCCCTTATGCC+TGG | 0.442146 | 4.2:-8731841 | MS.gene030590:intron |
| TATTTGGGAGTGCATAAAAC+AGG | 0.443229 | 4.2:-8729664 | MS.gene030590:CDS |
| GTATTTGATATAGGAAATAT+GGG | 0.444101 | 4.2:+8728356 | None:intergenic |
| CATTGTCCCGATTTGTCTGA+TGG | 0.447556 | 4.2:-8728107 | MS.gene030590:CDS |
| GGAACTGGGTGGAATCCCTT+TGG | 0.449066 | 4.2:-8727925 | MS.gene030590:CDS |
| TAAGTAACTAACCAGGCATA+AGG | 0.451280 | 4.2:+8731830 | None:intergenic |
| CTTGTGGCTGATTCACAATA+TGG | 0.451732 | 4.2:-8729979 | MS.gene030590:CDS |
| TCGCCTTTCTTGGGTTGAGA+TGG | 0.457253 | 4.2:+8728229 | None:intergenic |
| CATTGACGAATTTGTTGGCA+TGG | 0.460578 | 4.2:+8731497 | None:intergenic |
| AATATTGATGAGGTCGAGGT+TGG | 0.461354 | 4.2:+8729693 | None:intergenic |
| TCAGCCACAAATCTTGGAAA+TGG | 0.464454 | 4.2:-8728438 | MS.gene030590:CDS |
| CACAATGAAGTTTGTTGTTG+GGG | 0.464533 | 4.2:+8728324 | None:intergenic |
| CTCGAAGCTTAAATCCTCAA+TGG | 0.465704 | 4.2:-8729552 | MS.gene030590:CDS |
| TCAGCCATTTCCAAGATTTG+TGG | 0.465970 | 4.2:+8728434 | None:intergenic |
| TCTGCTACTCAGTATGTTGA+GGG | 0.467592 | 4.2:-8729517 | MS.gene030590:CDS |
| GGTGTTCCCACTGGTTCTCA+TGG | 0.474162 | 4.2:-8729349 | MS.gene030590:CDS |
| CCCAACGATAAAGCCTCTCC+TGG | 0.477706 | 4.2:+8730066 | None:intergenic |
| CTTCTCCTGCTAAAATGATC+AGG | 0.478884 | 4.2:-8729273 | MS.gene030590:CDS |
| GATGAAACTGATTCAGTTGA+GGG | 0.479380 | 4.2:+8730247 | None:intergenic |
| ACAGTTCTTTATAGTTTAGA+CGG | 0.480026 | 4.2:-8727703 | MS.gene030590:intron |
| TAAGTATTGTTAGCAAGTAT+AGG | 0.487108 | 4.2:+8731868 | None:intergenic |
| GCTTCCTTGCCATCACCCCT+TGG | 0.488707 | 4.2:+8730129 | None:intergenic |
| AGACGGGGAATGCTATACTT+TGG | 0.491186 | 4.2:-8727686 | MS.gene030590:CDS |
| AACATAAGCTGTTCATCACT+TGG | 0.491790 | 4.2:-8730180 | MS.gene030590:CDS |
| ATATAGGAAATATGGGAGTA+AGG | 0.495013 | 4.2:+8728363 | None:intergenic |
| GAAATACCAAATTTCCATTG+AGG | 0.497246 | 4.2:+8729538 | None:intergenic |
| TCCAGGAGAGGCTTTATCGT+TGG | 0.500412 | 4.2:-8730067 | MS.gene030590:CDS |
| CAGTTCTTTATAGTTTAGAC+GGG | 0.501962 | 4.2:-8727702 | MS.gene030590:CDS |
| ATTACAAGTGGCCCTCAGTA+AGG | 0.503694 | 4.2:+8728042 | None:intergenic |
| TTCTGCTACTCAGTATGTTG+AGG | 0.505290 | 4.2:-8729518 | MS.gene030590:CDS |
| ACGGGTTACTTGGCTGGCAA+AGG | 0.506068 | 4.2:-8730013 | MS.gene030590:CDS |
| GGCTGGCAAAGGATGTCATA+TGG | 0.506751 | 4.2:-8730002 | MS.gene030590:CDS |
| GGTGGTATATTTGAATCTCT+GGG | 0.507254 | 4.2:-8729583 | MS.gene030590:CDS |
| TCTCTCACAGTAACTATGTC+AGG | 0.508091 | 4.2:-8732037 | MS.gene030590:intron |
| ACTTGTTGCAGGTTGATTGA+AGG | 0.509976 | 4.2:-8728670 | MS.gene030590:intron |
| CGAGAATTCGCCCAATCGTA+CGG | 0.512761 | 4.2:-8732076 | MS.gene030590:CDS |
| AACAACAAACTTCATTGTGT+GGG | 0.513034 | 4.2:-8728320 | MS.gene030590:CDS |
| TTCTAGTAAGTATGTGTCTG+TGG | 0.513985 | 4.2:-8728578 | MS.gene030590:CDS |
| GGTGTTCTCACTTCTTTCAC+GGG | 0.514038 | 4.2:-8730031 | MS.gene030590:CDS |
| TGCACAGTATATGTCAGCCT+TGG | 0.514294 | 4.2:-8730298 | MS.gene030590:CDS |
| GGTGCAACCAGTAATGCAAA+TGG | 0.515177 | 4.2:+8728541 | None:intergenic |
| GCTCCATCTCAACCCAAGAA+AGG | 0.515909 | 4.2:-8728232 | MS.gene030590:CDS |
| AAGTAACTAACCAGGCATAA+GGG | 0.518932 | 4.2:+8731831 | None:intergenic |
| AATATTCTGCTGTGTCCGCT+TGG | 0.526824 | 4.2:-8729954 | MS.gene030590:CDS |
| AAAACCCTAACCGTACGATT+GGG | 0.528834 | 4.2:+8732066 | None:intergenic |
| TTACAATATTGATGAGGTCG+AGG | 0.533665 | 4.2:+8729689 | None:intergenic |
| TATTAAGACTGTCTTCATGA+TGG | 0.534636 | 4.2:+8729746 | None:intergenic |
| TGGAGAGATGCCGCAACTAT+CGG | 0.535045 | 4.2:+8728514 | None:intergenic |
| ATTGACGAATTTGTTGGCAT+GGG | 0.539156 | 4.2:+8731498 | None:intergenic |
| TGGAATTATTAGAGCACCAA+GGG | 0.540171 | 4.2:-8730145 | MS.gene030590:CDS |
| ATATTGATGAGGTCGAGGTT+GGG | 0.541092 | 4.2:+8729694 | None:intergenic |
| GGTGGAGAACGACAGCGTAC+CGG | 0.544053 | 4.2:-8732108 | MS.gene030590:CDS |
| ATTAGAGCACCAAGGGGTGA+TGG | 0.544542 | 4.2:-8730138 | MS.gene030590:CDS |
| AGGTGGCTTAATACTTTGGG+TGG | 0.546500 | 4.2:-8729601 | MS.gene030590:CDS |
| TGAAGCTTGATGCTCGAGCT+AGG | 0.547316 | 4.2:-8728075 | MS.gene030590:CDS |
| TCAACCCAAGAAAGGCGAAT+GGG | 0.547792 | 4.2:-8728224 | MS.gene030590:CDS |
| AGCACCAAGGGGTGATGGCA+AGG | 0.549825 | 4.2:-8730133 | MS.gene030590:CDS |
| ATAAGTAACCTCAGCATCCA+AGG | 0.552192 | 4.2:+8730281 | None:intergenic |
| GGGTGGAATCCCTTTGGACA+TGG | 0.552715 | 4.2:-8727919 | MS.gene030590:CDS |
| GGCAAGTTCAATGTATTCCC+AGG | 0.557053 | 4.2:-8729482 | MS.gene030590:intron |
| AGCACTGTTCCATGTCCAAA+GGG | 0.557411 | 4.2:+8727910 | None:intergenic |
| CAACAACAAACTTCATTGTG+TGG | 0.557574 | 4.2:-8728321 | MS.gene030590:CDS |
| TCTACCCTGAGGCGTCAAAT+GGG | 0.558662 | 4.2:-8729723 | MS.gene030590:CDS |
| TGGATTTGCTTGCATCAGCA+TGG | 0.562315 | 4.2:+8728494 | None:intergenic |
| TTCAACTTCAGAGGAAGATG+TGG | 0.564793 | 4.2:+8728462 | None:intergenic |
| GACTATACCCGAATCAGGAC+TGG | 0.565528 | 4.2:+8730209 | None:intergenic |
| TCAAGTTGATGCAATCACTC+TGG | 0.567606 | 4.2:-8729311 | MS.gene030590:CDS |
| GTGGCTGACTTCAACTTCAG+AGG | 0.568642 | 4.2:+8728453 | None:intergenic |
| ACCTAAAGCAAGATTACAAG+TGG | 0.568743 | 4.2:+8728030 | None:intergenic |
| GTCGAGCCATCAGACAAATC+GGG | 0.569667 | 4.2:+8728101 | None:intergenic |
| ACCCAAAGTATTAAGCCACC+TGG | 0.573206 | 4.2:+8729603 | None:intergenic |
| AATCCAAAGAAAGTAGGTCC+AGG | 0.573224 | 4.2:-8730084 | MS.gene030590:CDS |
| CCATACAATCCAAAGAAAGT+AGG | 0.575872 | 4.2:-8730090 | MS.gene030590:CDS |
| TGCACCACTTCCGATAGTTG+CGG | 0.576728 | 4.2:-8728524 | MS.gene030590:CDS |
| AGTGCTACTTACCTCTATGT+AGG | 0.578669 | 4.2:-8727893 | MS.gene030590:intron |
| GAGTGCATAAAACAGGTTTG+CGG | 0.582326 | 4.2:-8729657 | MS.gene030590:CDS |
| GGATGAAACTGATTCAGTTG+AGG | 0.584389 | 4.2:+8730246 | None:intergenic |
| TCTAGTAAGTATGTGTCTGT+GGG | 0.585208 | 4.2:-8728577 | MS.gene030590:CDS |
| GATGCCGCAACTATCGGAAG+TGG | 0.586445 | 4.2:+8728520 | None:intergenic |
| GTAATAAAAGTTGACGAGCA+AGG | 0.588032 | 4.2:-8729772 | MS.gene030590:CDS |
| CTTTGCTACAGCTGAAATCG+GGG | 0.589133 | 4.2:-8728137 | MS.gene030590:CDS |
| CTCAACCCAAGAAAGGCGAA+TGG | 0.591322 | 4.2:-8728225 | MS.gene030590:CDS |
| AATGAATTCATTCTCAGTGG+TGG | 0.592664 | 4.2:-8729247 | MS.gene030590:CDS |
| TGGCAAGGAAGCTATTGTCT+TGG | 0.595093 | 4.2:-8730118 | MS.gene030590:CDS |
| ACAACAAACTTCATTGTGTG+GGG | 0.599573 | 4.2:-8728319 | MS.gene030590:CDS |
| TCTGATAGAAATTTATACGG+TGG | 0.601188 | 4.2:-8729829 | MS.gene030590:CDS |
| TAGCACTGTTCCATGTCCAA+AGG | 0.602776 | 4.2:+8727909 | None:intergenic |
| AATGAAGTTTGTTGTTGGGG+TGG | 0.602908 | 4.2:+8728327 | None:intergenic |
| TCTGCCCATTTGACGCCTCA+GGG | 0.609315 | 4.2:+8729719 | None:intergenic |
| AATTCATTCTCAGTGGTGGA+AGG | 0.611705 | 4.2:-8729243 | MS.gene030590:intron |
| GCTCGAGCATCAAGCTTCAA+CGG | 0.614048 | 4.2:+8728079 | None:intergenic |
| TGTCAGCTTCATGGAAAACA+GGG | 0.614454 | 4.2:+8729914 | None:intergenic |
| TTTCTCTACTTGGGTCCAGG+TGG | 0.615749 | 4.2:-8729618 | MS.gene030590:CDS |
| GAGAGATAAACCAATGAAAG+CGG | 0.621088 | 4.2:+8728174 | None:intergenic |
| ACTGATGGAACTTCTCCAGA+AGG | 0.622506 | 4.2:+8728626 | None:intergenic |
| AATAATTTACAATATTGATG+AGG | 0.622757 | 4.2:+8729683 | None:intergenic |
| TGTTGGTGATTATTGGAACT+GGG | 0.626280 | 4.2:-8727939 | MS.gene030590:CDS |
| AAAGGATGTCATATGGCTTG+TGG | 0.628507 | 4.2:-8729995 | MS.gene030590:CDS |
| CTGGAATTATTAGAGCACCA+AGG | 0.633520 | 4.2:-8730146 | MS.gene030590:CDS |
| AGTCATCCAATACAAGATCA+GGG | 0.635155 | 4.2:+8727662 | None:intergenic |
| GGTGAACAATACCTACATAG+AGG | 0.637166 | 4.2:+8727882 | None:intergenic |
| ACTTACTAGAAGATGTCAAG+AGG | 0.638987 | 4.2:+8728590 | None:intergenic |
| TTGCATCAACTTGATAATCA+CGG | 0.639994 | 4.2:+8729320 | None:intergenic |
| TATGTCAGCCTTGGATGCTG+AGG | 0.642869 | 4.2:-8730289 | MS.gene030590:CDS |
| GGAGCTTGAGAGCCTTACTG+AGG | 0.645428 | 4.2:-8728054 | MS.gene030590:CDS |
| GAAGGCACCATGAGAACCAG+TGG | 0.651699 | 4.2:+8729342 | None:intergenic |
| AAAGAAAGTAGGTCCAGGAG+AGG | 0.656800 | 4.2:-8730079 | MS.gene030590:CDS |
| CTGATATTCTCTTAGCCAAG+CGG | 0.664447 | 4.2:+8729939 | None:intergenic |
| GAGCTTGAGAGCCTTACTGA+GGG | 0.667701 | 4.2:-8728053 | MS.gene030590:CDS |
| GGAAGATGTGGATTGCAGAG+TGG | 0.668514 | 4.2:+8728474 | None:intergenic |
| CGTAATGAATTCATTCTCAG+TGG | 0.671667 | 4.2:-8729250 | MS.gene030590:CDS |
| ATCAACTTGATAATCACGGA+AGG | 0.674498 | 4.2:+8729324 | None:intergenic |
| TGGTGATTATTGGAACTGGG+TGG | 0.696113 | 4.2:-8727936 | MS.gene030590:CDS |
| GTCAGCTTCATGGAAAACAG+GGG | 0.707052 | 4.2:+8729915 | None:intergenic |
| AAGGCACCATGAGAACCAGT+GGG | 0.709237 | 4.2:+8729343 | None:intergenic |
| AGTTCTTTATAGTTTAGACG+GGG | 0.740788 | 4.2:-8727701 | MS.gene030590:CDS |
| CAGTCTTAATATCTACCCTG+AGG | 0.742097 | 4.2:-8729734 | MS.gene030590:CDS |
| GGAATTATTAGAGCACCAAG+GGG | 0.759596 | 4.2:-8730144 | MS.gene030590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAATGTTTATTAAAA+TGG | + | chr4.2:8730375-8730394 | None:intergenic | 10.0% |
| !! | ATCAATATTGTAAATTATTT+GGG | - | chr4.2:8730091-8730110 | MS.gene030590:CDS | 10.0% |
| !! | AAATCACAAAAAGATTAAAA+AGG | + | chr4.2:8729198-8729217 | None:intergenic | 15.0% |
| !! | AACATAAAATGAAAAGTTTA+AGG | + | chr4.2:8728757-8728776 | None:intergenic | 15.0% |
| !! | AATAATTTACAATATTGATG+AGG | + | chr4.2:8730090-8730109 | None:intergenic | 15.0% |
| !! | CATCAATATTGTAAATTATT+TGG | - | chr4.2:8730090-8730109 | MS.gene030590:CDS | 15.0% |
| !! | TATTCTGATAGAAATTTATA+CGG | - | chr4.2:8729938-8729957 | MS.gene030590:CDS | 15.0% |
| !!! | ATAATTTTGTACTTCATTTT+GGG | - | chr4.2:8731496-8731515 | MS.gene030590:CDS | 15.0% |
| !! | AAATTATATTTACTTCCACT+AGG | - | chr4.2:8730797-8730816 | MS.gene030590:intron | 20.0% |
| !! | AATTATATTTACTTCCACTA+GGG | - | chr4.2:8730798-8730817 | MS.gene030590:intron | 20.0% |
| !! | AATTCAATATGTAGTTACAA+AGG | + | chr4.2:8728654-8728673 | None:intergenic | 20.0% |
| !! | CTCCAAAAAAAAAAAACTTA+GGG | + | chr4.2:8728080-8728099 | None:intergenic | 20.0% |
| !! | GTATTTGATATAGGAAATAT+GGG | + | chr4.2:8731417-8731436 | None:intergenic | 20.0% |
| !! | TCTCCAAAAAAAAAAAACTT+AGG | + | chr4.2:8728081-8728100 | None:intergenic | 20.0% |
| !! | TCTGAATTTGAATTTCAATT+TGG | - | chr4.2:8727789-8727808 | MS.gene030590:intron | 20.0% |
| !!! | AATAAGTTGAAAGTAGTTTA+TGG | - | chr4.2:8728110-8728129 | MS.gene030590:CDS | 20.0% |
| !!! | AGTATTGCTATTAATGAAAT+TGG | - | chr4.2:8729905-8729924 | MS.gene030590:CDS | 20.0% |
| !!! | ATTTTTAACTCCTAAATATG+TGG | - | chr4.2:8730635-8730654 | MS.gene030590:intron | 20.0% |
| !!! | CATAATTTTGTACTTCATTT+TGG | - | chr4.2:8731495-8731514 | MS.gene030590:CDS | 20.0% |
| !!! | TATTATTTCTTTTTCCAAGA+GGG | - | chr4.2:8730932-8730951 | MS.gene030590:intron | 20.0% |
| !!! | TCAAGTTATTTCCATAAATT+AGG | + | chr4.2:8727984-8728003 | None:intergenic | 20.0% |
| !!! | TTCCCTAAGTTTTTTTTTTT+TGG | - | chr4.2:8728075-8728094 | MS.gene030590:CDS | 20.0% |
| ! | AAATGAGAAAGAGATGAAAA+TGG | + | chr4.2:8728324-8728343 | None:intergenic | 25.0% |
| ! | AAGACAAAATTAAGAAGCTT+TGG | + | chr4.2:8729350-8729369 | None:intergenic | 25.0% |
| ! | ACAAAAAGATTAAAAAGGTG+CGG | + | chr4.2:8729193-8729212 | None:intergenic | 25.0% |
| ! | ACAGTTCTTTATAGTTTAGA+CGG | - | chr4.2:8732067-8732086 | MS.gene030590:CDS | 25.0% |
| ! | ACTAAAATTACATGTCAACA+AGG | + | chr4.2:8731952-8731971 | None:intergenic | 25.0% |
| ! | AGTAAATGGAAAACATAAAC+AGG | + | chr4.2:8730669-8730688 | None:intergenic | 25.0% |
| ! | ATGACAAATGACAGTTTATT+GGG | - | chr4.2:8730893-8730912 | MS.gene030590:intron | 25.0% |
| ! | GGTATTTGATATAGGAAATA+TGG | + | chr4.2:8731418-8731437 | None:intergenic | 25.0% |
| ! | GTAAATGGAAAACATAAACA+GGG | + | chr4.2:8730668-8730687 | None:intergenic | 25.0% |
| ! | GTGTATGTTTACTTAAGAAA+AGG | - | chr4.2:8730720-8730739 | MS.gene030590:intron | 25.0% |
| ! | TCTTTCATAACTGTTTATTG+AGG | - | chr4.2:8729120-8729139 | MS.gene030590:intron | 25.0% |
| ! | TGGAATTAGGTATTTGATAT+AGG | + | chr4.2:8731426-8731445 | None:intergenic | 25.0% |
| ! | TGTAGTTACATGATAGTAAA+TGG | + | chr4.2:8730683-8730702 | None:intergenic | 25.0% |
| ! | TTAAATCCTCAATGGAAATT+TGG | - | chr4.2:8730226-8730245 | MS.gene030590:CDS | 25.0% |
| ! | TTAACAATATTATGATGCAG+TGG | - | chr4.2:8728673-8728692 | MS.gene030590:intron | 25.0% |
| ! | TTCACTAAAAAATATGCTAC+CGG | + | chr4.2:8731781-8731800 | None:intergenic | 25.0% |
| ! | TTTATAAAGTCAGAGATTAG+AGG | - | chr4.2:8729053-8729072 | MS.gene030590:intron | 25.0% |
| !! | AAGCTAAAGAAACTTTAGAA+GGG | - | chr4.2:8730821-8730840 | MS.gene030590:intron | 25.0% |
| !! | CTTTTGTTCATGTTCTTATA+TGG | - | chr4.2:8728825-8728844 | MS.gene030590:intron | 25.0% |
| !! | TAAGTATTGTTAGCAAGTAT+AGG | + | chr4.2:8727905-8727924 | None:intergenic | 25.0% |
| !! | TGTTTATTAAAATGGTAACG+AGG | + | chr4.2:8730367-8730386 | None:intergenic | 25.0% |
| !!! | AACAATATGCTTTAAAGAGA+AGG | + | chr4.2:8732036-8732055 | None:intergenic | 25.0% |
| !!! | ATGTTTTGGTCATTCATTTA+TGG | - | chr4.2:8731371-8731390 | MS.gene030590:intron | 25.0% |
| !!! | GACATGTAATTTTAGTTAGT+TGG | - | chr4.2:8731956-8731975 | MS.gene030590:intron | 25.0% |
| !!! | GTAGCATATTTTTTAGTGAA+GGG | - | chr4.2:8731781-8731800 | MS.gene030590:intron | 25.0% |
| !!! | GTATTATTTCTTTTTCCAAG+AGG | - | chr4.2:8730931-8730950 | MS.gene030590:intron | 25.0% |
| !!! | TGTTTTGGTCATTCATTTAT+GGG | - | chr4.2:8731372-8731391 | MS.gene030590:intron | 25.0% |
| AACAACAAACTTCATTGTGT+GGG | - | chr4.2:8731450-8731469 | MS.gene030590:intron | 30.0% | |
| AACATCTTGGAATAAATGTC+TGG | - | chr4.2:8730581-8730600 | MS.gene030590:intron | 30.0% | |
| AATAAATGTCTGGTCATCAA+TGG | - | chr4.2:8730591-8730610 | MS.gene030590:intron | 30.0% | |
| ACTTTCATTGGATGTTAGTT+TGG | - | chr4.2:8728707-8728726 | MS.gene030590:intron | 30.0% | |
| AGAGTAAAAGTTAACTACCT+GGG | + | chr4.2:8730308-8730327 | None:intergenic | 30.0% | |
| AGTTCTTTATAGTTTAGACG+GGG | - | chr4.2:8732069-8732088 | MS.gene030590:CDS | 30.0% | |
| ATATAGGAAATATGGGAGTA+AGG | + | chr4.2:8731410-8731429 | None:intergenic | 30.0% | |
| ATGAATGACCAAAACATTTC+TGG | + | chr4.2:8731368-8731387 | None:intergenic | 30.0% | |
| ATGAGTAAGAATAACTGTCT+TGG | - | chr4.2:8727823-8727842 | MS.gene030590:intron | 30.0% | |
| ATTGAGGATATTATCCAAAC+CGG | - | chr4.2:8729136-8729155 | MS.gene030590:intron | 30.0% | |
| CAGTTCTTTATAGTTTAGAC+GGG | - | chr4.2:8732068-8732087 | MS.gene030590:CDS | 30.0% | |
| CATGACAAATGACAGTTTAT+TGG | - | chr4.2:8730892-8730911 | MS.gene030590:intron | 30.0% | |
| CTTTCTCAACACCTAATTTA+TGG | - | chr4.2:8727970-8727989 | MS.gene030590:CDS | 30.0% | |
| GAAATACCAAATTTCCATTG+AGG | + | chr4.2:8730235-8730254 | None:intergenic | 30.0% | |
| GAAGCTAAAGAAACTTTAGA+AGG | - | chr4.2:8730820-8730839 | MS.gene030590:intron | 30.0% | |
| GCAAAATAGTAGACTTTCAT+TGG | - | chr4.2:8728695-8728714 | MS.gene030590:intron | 30.0% | |
| GGTATAAAAAGAATGACTGA+TGG | + | chr4.2:8731162-8731181 | None:intergenic | 30.0% | |
| TAGAGTAAAAGTTAACTACC+TGG | + | chr4.2:8730309-8730328 | None:intergenic | 30.0% | |
| TATTAACTATGTCAGCTTCA+TGG | + | chr4.2:8729868-8729887 | None:intergenic | 30.0% | |
| TATTAAGACTGTCTTCATGA+TGG | + | chr4.2:8730027-8730046 | None:intergenic | 30.0% | |
| TCAATATGTAGTTACAAAGG+TGG | + | chr4.2:8728651-8728670 | None:intergenic | 30.0% | |
| TCTGATAGAAATTTATACGG+TGG | - | chr4.2:8729941-8729960 | MS.gene030590:CDS | 30.0% | |
| TTAAGAAAAGGAGAACAGTA+TGG | - | chr4.2:8730732-8730751 | MS.gene030590:intron | 30.0% | |
| ! | ACTGTCATTTGTCATGTTAA+AGG | + | chr4.2:8730888-8730907 | None:intergenic | 30.0% |
| ! | AGTTTGACTTCACTTATTTG+AGG | + | chr4.2:8728031-8728050 | None:intergenic | 30.0% |
| ! | TGAAGATGTTTTCTCTACTT+GGG | - | chr4.2:8730143-8730162 | MS.gene030590:CDS | 30.0% |
| ! | TTGCATCAACTTGATAATCA+CGG | + | chr4.2:8730453-8730472 | None:intergenic | 30.0% |
| !! | AATTTGCTATTAGTGCAAAC+CGG | - | chr4.2:8728548-8728567 | MS.gene030590:CDS | 30.0% |
| !! | ACACAATGAAGTTTGTTGTT+GGG | + | chr4.2:8731450-8731469 | None:intergenic | 30.0% |
| !! | ATTCAATAATCTGTTTCTGC+AGG | - | chr4.2:8728214-8728233 | MS.gene030590:CDS | 30.0% |
| !! | GATTTTGATGGTACTAATGT+TGG | - | chr4.2:8731814-8731833 | MS.gene030590:intron | 30.0% |
| !! | GTACTAATGTTGGTGATTAT+TGG | - | chr4.2:8731824-8731843 | MS.gene030590:intron | 30.0% |
| !! | GTGATTTTGATCATACTAGT+TGG | - | chr4.2:8729211-8729230 | MS.gene030590:intron | 30.0% |
| !! | GTGTGTTATTTGTAACATCT+TGG | - | chr4.2:8730568-8730587 | MS.gene030590:intron | 30.0% |
| !! | GTTTTGGTCATTCATTTATG+GGG | - | chr4.2:8731373-8731392 | MS.gene030590:intron | 30.0% |
| !!! | GGTAGCATATTTTTTAGTGA+AGG | - | chr4.2:8731780-8731799 | MS.gene030590:intron | 30.0% |
| AACATAAGCTGTTCATCACT+TGG | - | chr4.2:8729590-8729609 | MS.gene030590:CDS | 35.0% | |
| AACTTTGCTACAGCTGAAAT+CGG | - | chr4.2:8731631-8731650 | MS.gene030590:intron | 35.0% | |
| AAGTAACTAACCAGGCATAA+GGG | + | chr4.2:8727942-8727961 | None:intergenic | 35.0% | |
| AATGAATTCATTCTCAGTGG+TGG | - | chr4.2:8730523-8730542 | MS.gene030590:intron | 35.0% | |
| ACAACAAACTTCATTGTGTG+GGG | - | chr4.2:8731451-8731470 | MS.gene030590:intron | 35.0% | |
| ACAATATCAACCGCTTTCAT+TGG | - | chr4.2:8731586-8731605 | MS.gene030590:intron | 35.0% | |
| ACCTAAAGCAAGATTACAAG+TGG | + | chr4.2:8731743-8731762 | None:intergenic | 35.0% | |
| ACTAAAAAATATGCTACCGG+AGG | + | chr4.2:8731778-8731797 | None:intergenic | 35.0% | |
| ACTTACTAGAAGATGTCAAG+AGG | + | chr4.2:8731183-8731202 | None:intergenic | 35.0% | |
| AGTCATCCAATACAAGATCA+GGG | + | chr4.2:8732111-8732130 | None:intergenic | 35.0% | |
| ATCAGTGTAAATCAGCTCAA+AGG | + | chr4.2:8728734-8728753 | None:intergenic | 35.0% | |
| ATTTGTATATCATTCCTCCC+AGG | - | chr4.2:8730393-8730412 | MS.gene030590:intron | 35.0% | |
| CAACAACAAACTTCATTGTG+TGG | - | chr4.2:8731449-8731468 | MS.gene030590:intron | 35.0% | |
| CAAGTCATTGACGAATTTGT+TGG | + | chr4.2:8728281-8728300 | None:intergenic | 35.0% | |
| CACAAACATCTAAGTTCACA+GGG | + | chr4.2:8728930-8728949 | None:intergenic | 35.0% | |
| CAGTATGGCCAATTATTTGA+AGG | - | chr4.2:8730747-8730766 | MS.gene030590:intron | 35.0% | |
| CATGATTCCATTTGCATTAC+TGG | - | chr4.2:8731222-8731241 | MS.gene030590:intron | 35.0% | |
| CCATACAATCCAAAGAAAGT+AGG | - | chr4.2:8729680-8729699 | MS.gene030590:CDS | 35.0% | |
| CCTACTTTCTTTGGATTGTA+TGG | + | chr4.2:8729683-8729702 | None:intergenic | 35.0% | |
| CGTAATGAATTCATTCTCAG+TGG | - | chr4.2:8730520-8730539 | MS.gene030590:intron | 35.0% | |
| GAACTGAGCCTTCAAATAAT+TGG | + | chr4.2:8730758-8730777 | None:intergenic | 35.0% | |
| GAGAGATAAACCAATGAAAG+CGG | + | chr4.2:8731599-8731618 | None:intergenic | 35.0% | |
| GGTGGTATATTTGAATCTCT+GGG | - | chr4.2:8730187-8730206 | MS.gene030590:CDS | 35.0% | |
| GTAAGAATAACTGTCTTGGT+TGG | - | chr4.2:8727827-8727846 | MS.gene030590:intron | 35.0% | |
| GTAATAAAAGTTGACGAGCA+AGG | - | chr4.2:8729998-8730017 | MS.gene030590:CDS | 35.0% | |
| TAAGTAACTAACCAGGCATA+AGG | + | chr4.2:8727943-8727962 | None:intergenic | 35.0% | |
| TAGTCATCCAATACAAGATC+AGG | + | chr4.2:8732112-8732131 | None:intergenic | 35.0% | |
| TCATCATGTAAGTGTAAACC+CGG | + | chr4.2:8728570-8728589 | None:intergenic | 35.0% | |
| TCTAGTAAGTATGTGTCTGT+GGG | - | chr4.2:8731193-8731212 | MS.gene030590:intron | 35.0% | |
| TGTTATGCAGACTGTCTAAT+TGG | - | chr4.2:8728801-8728820 | MS.gene030590:intron | 35.0% | |
| TTACAATATTGATGAGGTCG+AGG | + | chr4.2:8730084-8730103 | None:intergenic | 35.0% | |
| TTCCAAGCAGAGAGAAAATT+AGG | + | chr4.2:8729386-8729405 | None:intergenic | 35.0% | |
| TTCTAGTAAGTATGTGTCTG+TGG | - | chr4.2:8731192-8731211 | MS.gene030590:intron | 35.0% | |
| TTTGAAAATCCCGTCCAAAT+GGG | - | chr4.2:8729296-8729315 | MS.gene030590:CDS | 35.0% | |
| TTTGTATATCATTCCTCCCA+GGG | - | chr4.2:8730394-8730413 | MS.gene030590:intron | 35.0% | |
| ! | ATCAACTTGATAATCACGGA+AGG | + | chr4.2:8730449-8730468 | None:intergenic | 35.0% |
| ! | GATGAAACTGATTCAGTTGA+GGG | + | chr4.2:8729526-8729545 | None:intergenic | 35.0% |
| ! | GGCTCATGTCTCAATTTTAA+AGG | + | chr4.2:8728432-8728451 | None:intergenic | 35.0% |
| ! | GGTGCATTTGAAGATTTTGA+TGG | - | chr4.2:8731802-8731821 | MS.gene030590:intron | 35.0% |
| ! | GTGAAGATGTTTTCTCTACT+TGG | - | chr4.2:8730142-8730161 | MS.gene030590:CDS | 35.0% |
| ! | TATTTCTTTTTCCAAGAGGG+AGG | - | chr4.2:8730935-8730954 | MS.gene030590:intron | 35.0% |
| ! | TATTTGGGAGTGCATAAAAC+AGG | - | chr4.2:8730106-8730125 | MS.gene030590:CDS | 35.0% |
| ! | TGGAATTATTAGAGCACCAA+GGG | - | chr4.2:8729625-8729644 | MS.gene030590:CDS | 35.0% |
| ! | TTCCTAATTTTCTCTCTGCT+TGG | - | chr4.2:8729381-8729400 | MS.gene030590:intron | 35.0% |
| !! | ATGTTGGTGATTATTGGAAC+TGG | - | chr4.2:8731830-8731849 | MS.gene030590:intron | 35.0% |
| !! | ATTGACGAATTTGTTGGCAT+GGG | + | chr4.2:8728275-8728294 | None:intergenic | 35.0% |
| !! | ATTTGCTATTAGTGCAAACC+GGG | - | chr4.2:8728549-8728568 | MS.gene030590:CDS | 35.0% |
| !! | ATTTTAGCAGGAGAAGCTTT+TGG | + | chr4.2:8730493-8730512 | None:intergenic | 35.0% |
| !! | CACAATGAAGTTTGTTGTTG+GGG | + | chr4.2:8731449-8731468 | None:intergenic | 35.0% |
| !! | CACACAATGAAGTTTGTTGT+TGG | + | chr4.2:8731451-8731470 | None:intergenic | 35.0% |
| !! | TGTTGGTGATTATTGGAACT+GGG | - | chr4.2:8731831-8731850 | MS.gene030590:intron | 35.0% |
| AAAAACCCTAACCGTACGAT+TGG | + | chr4.2:8727708-8727727 | None:intergenic | 40.0% | |
| AAAACCCTAACCGTACGATT+GGG | + | chr4.2:8727707-8727726 | None:intergenic | 40.0% | |
| AAAGGATGTCATATGGCTTG+TGG | - | chr4.2:8729775-8729794 | MS.gene030590:CDS | 40.0% | |
| AATATTGATGAGGTCGAGGT+TGG | + | chr4.2:8730080-8730099 | None:intergenic | 40.0% | |
| AATCCAAAGAAAGTAGGTCC+AGG | - | chr4.2:8729686-8729705 | MS.gene030590:CDS | 40.0% | |
| ACGCTCAATAAACAACCTTC+TGG | - | chr4.2:8731129-8731148 | MS.gene030590:intron | 40.0% | |
| ACTTTGCTACAGCTGAAATC+GGG | - | chr4.2:8731632-8731651 | MS.gene030590:intron | 40.0% | |
| AGAGAGGTAAGTAACTAACC+AGG | + | chr4.2:8727950-8727969 | None:intergenic | 40.0% | |
| ATAAGTAACCTCAGCATCCA+AGG | + | chr4.2:8729492-8729511 | None:intergenic | 40.0% | |
| ATATTGATGAGGTCGAGGTT+GGG | + | chr4.2:8730079-8730098 | None:intergenic | 40.0% | |
| ATGTCAGCTTCATGGAAAAC+AGG | + | chr4.2:8729860-8729879 | None:intergenic | 40.0% | |
| CAGTCTTAATATCTACCCTG+AGG | - | chr4.2:8730036-8730055 | MS.gene030590:CDS | 40.0% | |
| CATTAATGCGACTTCGATTG+AGG | - | chr4.2:8728456-8728475 | MS.gene030590:CDS | 40.0% | |
| CCACAAACATCTAAGTTCAC+AGG | + | chr4.2:8728931-8728950 | None:intergenic | 40.0% | |
| CCTGTGAACTTAGATGTTTG+TGG | - | chr4.2:8728928-8728947 | MS.gene030590:intron | 40.0% | |
| CTCGAAGCTTAAATCCTCAA+TGG | - | chr4.2:8730218-8730237 | MS.gene030590:CDS | 40.0% | |
| CTGATATTCTCTTAGCCAAG+CGG | + | chr4.2:8729834-8729853 | None:intergenic | 40.0% | |
| CTTCTCCTGCTAAAATGATC+AGG | - | chr4.2:8730497-8730516 | MS.gene030590:intron | 40.0% | |
| GAGTGCATAAAACAGGTTTG+CGG | - | chr4.2:8730113-8730132 | MS.gene030590:CDS | 40.0% | |
| GCCACTTGTAATCTTGCTTT+AGG | - | chr4.2:8731739-8731758 | MS.gene030590:intron | 40.0% | |
| GGGTGGTATATTTGAATCTC+TGG | - | chr4.2:8730186-8730205 | MS.gene030590:CDS | 40.0% | |
| GGTGAACAATACCTACATAG+AGG | + | chr4.2:8731891-8731910 | None:intergenic | 40.0% | |
| TATAGACTATAGAGCCGGTT+TGG | + | chr4.2:8729153-8729172 | None:intergenic | 40.0% | |
| TATTGTTCACCTACCATGCT+GGG | - | chr4.2:8731900-8731919 | MS.gene030590:CDS | 40.0% | |
| TCACTTGGAATCAACATTGC+TGG | - | chr4.2:8729605-8729624 | MS.gene030590:CDS | 40.0% | |
| TCAGCCACAAATCTTGGAAA+TGG | - | chr4.2:8731332-8731351 | MS.gene030590:intron | 40.0% | |
| TCAGCCATTTCCAAGATTTG+TGG | + | chr4.2:8731339-8731358 | None:intergenic | 40.0% | |
| TCCAGGTGGCTTAATACTTT+GGG | - | chr4.2:8730166-8730185 | MS.gene030590:CDS | 40.0% | |
| TCGAAGTCGCATTAATGTAG+CGG | + | chr4.2:8728453-8728472 | None:intergenic | 40.0% | |
| TCTCTCACAGTAACTATGTC+AGG | - | chr4.2:8727733-8727752 | MS.gene030590:intron | 40.0% | |
| TCTGCTACTCAGTATGTTGA+GGG | - | chr4.2:8730253-8730272 | MS.gene030590:CDS | 40.0% | |
| TGTCAGCTTCATGGAAAACA+GGG | + | chr4.2:8729859-8729878 | None:intergenic | 40.0% | |
| TTCAACTTCAGAGGAAGATG+TGG | + | chr4.2:8731311-8731330 | None:intergenic | 40.0% | |
| TTCTGCTACTCAGTATGTTG+AGG | - | chr4.2:8730252-8730271 | MS.gene030590:CDS | 40.0% | |
| TTGAAGTCAGCCACAAATCT+TGG | - | chr4.2:8731326-8731345 | MS.gene030590:intron | 40.0% | |
| TTTGGTCCCTGATCTTGTAT+TGG | - | chr4.2:8732102-8732121 | MS.gene030590:CDS | 40.0% | |
| ! | AATTCATTCTCAGTGGTGGA+AGG | - | chr4.2:8730527-8730546 | MS.gene030590:intron | 40.0% |
| ! | AGTTTCTTTAGCTTCCCTAG+TGG | + | chr4.2:8730815-8730834 | None:intergenic | 40.0% |
| ! | CATTTGGACGGGATTTTCAA+AGG | + | chr4.2:8729297-8729316 | None:intergenic | 40.0% |
| ! | CGAATTCTCGGTTTCTTTTC+CGG | + | chr4.2:8727684-8727703 | None:intergenic | 40.0% |
| ! | CTGGAATTATTAGAGCACCA+AGG | - | chr4.2:8729624-8729643 | MS.gene030590:CDS | 40.0% |
| ! | CTTGTGGCTGATTCACAATA+TGG | - | chr4.2:8729791-8729810 | MS.gene030590:CDS | 40.0% |
| ! | CTTTGAAAATCCCGTCCAAA+TGG | - | chr4.2:8729295-8729314 | MS.gene030590:CDS | 40.0% |
| ! | GAACTCAGCCAGAAATGTTT+TGG | - | chr4.2:8731357-8731376 | MS.gene030590:intron | 40.0% |
| ! | GGAATTATTAGAGCACCAAG+GGG | - | chr4.2:8729626-8729645 | MS.gene030590:CDS | 40.0% |
| ! | GGATGAAACTGATTCAGTTG+AGG | + | chr4.2:8729527-8729546 | None:intergenic | 40.0% |
| ! | TTTGAGACTATACCCGAATC+AGG | + | chr4.2:8729569-8729588 | None:intergenic | 40.0% |
| ! | TTTTAGACGTGCTGGAACTA+TGG | - | chr4.2:8729964-8729983 | MS.gene030590:CDS | 40.0% |
| ! | TTTTTCACCAGTCCTGATTC+GGG | - | chr4.2:8729554-8729573 | MS.gene030590:CDS | 40.0% |
| !! | AAGAATGTGCTACTTGTTGC+AGG | - | chr4.2:8731089-8731108 | MS.gene030590:intron | 40.0% |
| !! | AATGAAGTTTGTTGTTGGGG+TGG | + | chr4.2:8731446-8731465 | None:intergenic | 40.0% |
| !! | ACTTGTTGCAGGTTGATTGA+AGG | - | chr4.2:8731100-8731119 | MS.gene030590:intron | 40.0% |
| !! | AGCTTGCTTTGTTTCGTATC+TGG | - | chr4.2:8727857-8727876 | MS.gene030590:intron | 40.0% |
| !! | AGTGCTACTTACCTCTATGT+AGG | - | chr4.2:8731877-8731896 | MS.gene030590:CDS | 40.0% |
| !! | CATTGACGAATTTGTTGGCA+TGG | + | chr4.2:8728276-8728295 | None:intergenic | 40.0% |
| !! | CTTTTTCACCAGTCCTGATT+CGG | - | chr4.2:8729553-8729572 | MS.gene030590:CDS | 40.0% |
| !! | TCAAGTTGATGCAATCACTC+TGG | - | chr4.2:8730459-8730478 | MS.gene030590:intron | 40.0% |
| !! | TTACGCCTGATCATTTTAGC+AGG | + | chr4.2:8730505-8730524 | None:intergenic | 40.0% |
| !! | TTAGGTGTTGAGAAAGAGAG+AGG | + | chr4.2:8727966-8727985 | None:intergenic | 40.0% |
| !! | TTTGTTGTTGGGGTGGAATT+AGG | + | chr4.2:8731439-8731458 | None:intergenic | 40.0% |
| !!! | AGGTTTTATTGCGTTTCCTC+CGG | - | chr4.2:8731759-8731778 | MS.gene030590:intron | 40.0% |
| AAAGAAAGTAGGTCCAGGAG+AGG | - | chr4.2:8729691-8729710 | MS.gene030590:CDS | 45.0% | |
| AATATTCTGCTGTGTCCGCT+TGG | - | chr4.2:8729816-8729835 | MS.gene030590:CDS | 45.0% | |
| ACTGATGGAACTTCTCCAGA+AGG | + | chr4.2:8731147-8731166 | None:intergenic | 45.0% | |
| AGACGGGGAATGCTATACTT+TGG | - | chr4.2:8732084-8732103 | MS.gene030590:CDS | 45.0% | |
| AGCACTGTTCCATGTCCAAA+GGG | + | chr4.2:8731863-8731882 | None:intergenic | 45.0% | |
| AGGTGGCTTAATACTTTGGG+TGG | - | chr4.2:8730169-8730188 | MS.gene030590:CDS | 45.0% | |
| AGTTCAGTCTCAGTCGTTAG+AGG | - | chr4.2:8730773-8730792 | MS.gene030590:intron | 45.0% | |
| ATATCATTCCTCCCAGGGTT+TGG | - | chr4.2:8730399-8730418 | MS.gene030590:intron | 45.0% | |
| ATTACAAGTGGCCCTCAGTA+AGG | + | chr4.2:8731731-8731750 | None:intergenic | 45.0% | |
| CGCTTGGCTAAGAGAATATC+AGG | - | chr4.2:8729832-8729851 | MS.gene030590:CDS | 45.0% | |
| CGGTGTTCTCACTTCTTTCA+CGG | - | chr4.2:8729738-8729757 | MS.gene030590:CDS | 45.0% | |
| CTTTGCTACAGCTGAAATCG+GGG | - | chr4.2:8731633-8731652 | MS.gene030590:intron | 45.0% | |
| GATGGAGCAGCTTCGAAAAT+TGG | + | chr4.2:8731526-8731545 | None:intergenic | 45.0% | |
| GCGGATATAGACTATAGAGC+CGG | + | chr4.2:8729158-8729177 | None:intergenic | 45.0% | |
| GGCAAGTTCAATGTATTCCC+AGG | - | chr4.2:8730288-8730307 | MS.gene030590:CDS | 45.0% | |
| GGGCATCACACCACATATTT+AGG | + | chr4.2:8730648-8730667 | None:intergenic | 45.0% | |
| GGTGCAACCAGTAATGCAAA+TGG | + | chr4.2:8731232-8731251 | None:intergenic | 45.0% | |
| GGTGCGGATATAGACTATAG+CGG | + | chr4.2:8729177-8729196 | None:intergenic | 45.0% | |
| GGTGTTCTCACTTCTTTCAC+GGG | - | chr4.2:8729739-8729758 | MS.gene030590:CDS | 45.0% | |
| GTATTGTTCACCTACCATGC+TGG | - | chr4.2:8731899-8731918 | MS.gene030590:CDS | 45.0% | |
| GTCAGCTTCATGGAAAACAG+GGG | + | chr4.2:8729858-8729877 | None:intergenic | 45.0% | |
| GTCCAGGTGGCTTAATACTT+TGG | - | chr4.2:8730165-8730184 | MS.gene030590:CDS | 45.0% | |
| TAGCACTGTTCCATGTCCAA+AGG | + | chr4.2:8731864-8731883 | None:intergenic | 45.0% | |
| TATCATTCCTCCCAGGGTTT+GGG | - | chr4.2:8730400-8730419 | MS.gene030590:intron | 45.0% | |
| TCAACCCAAGAAAGGCGAAT+GGG | - | chr4.2:8731546-8731565 | MS.gene030590:intron | 45.0% | |
| TCTCCTGGACCTACTTTCTT+TGG | + | chr4.2:8729692-8729711 | None:intergenic | 45.0% | |
| TGCACAGTATATGTCAGCCT+TGG | - | chr4.2:8729472-8729491 | MS.gene030590:intron | 45.0% | |
| TGGCAAGGAAGCTATTGTCT+TGG | - | chr4.2:8729652-8729671 | MS.gene030590:CDS | 45.0% | |
| TGGTGATTATTGGAACTGGG+TGG | - | chr4.2:8731834-8731853 | MS.gene030590:intron | 45.0% | |
| ! | ACCCAAAGTATTAAGCCACC+TGG | + | chr4.2:8730170-8730189 | None:intergenic | 45.0% |
| ! | ATCGTTGGGCATTGCTTACT+CGG | - | chr4.2:8729718-8729737 | MS.gene030590:CDS | 45.0% |
| ! | CACTTCTTTCACGGGTTACT+TGG | - | chr4.2:8729747-8729766 | MS.gene030590:CDS | 45.0% |
| ! | CATTGTCCCGATTTGTCTGA+TGG | - | chr4.2:8731663-8731682 | MS.gene030590:intron | 45.0% |
| ! | GGACTGGTGAAAAAGTGCAA+TGG | + | chr4.2:8729548-8729567 | None:intergenic | 45.0% |
| ! | GTAGCTTTTGCCCATTTGGA+CGG | + | chr4.2:8729309-8729328 | None:intergenic | 45.0% |
| ! | GTTACAAAGGTGGACTCATG+TGG | + | chr4.2:8728641-8728660 | None:intergenic | 45.0% |
| ! | TAGCTTTTGCCCATTTGGAC+GGG | + | chr4.2:8729308-8729327 | None:intergenic | 45.0% |
| ! | TCACGTAGCTTTTGCCCATT+TGG | + | chr4.2:8729313-8729332 | None:intergenic | 45.0% |
| ! | TGGATTTGCTTGCATCAGCA+TGG | + | chr4.2:8731279-8731298 | None:intergenic | 45.0% |
| ! | TGTTTTCTCTACTTGGGTCC+AGG | - | chr4.2:8730149-8730168 | MS.gene030590:CDS | 45.0% |
| !!! | ACCAGGCATAAGGGCATTTT+CGG | + | chr4.2:8727933-8727952 | None:intergenic | 45.0% |
| ATTCGCCCAATCGTACGGTT+AGG | - | chr4.2:8727699-8727718 | MS.gene030590:CDS | 50.0% | |
| CGAGAATTCGCCCAATCGTA+CGG | - | chr4.2:8727694-8727713 | MS.gene030590:CDS | 50.0% | |
| CGTACGATTGGGCGAATTCT+CGG | + | chr4.2:8727696-8727715 | None:intergenic | 50.0% | |
| CTAGCCCATTCGCCTTTCTT+GGG | + | chr4.2:8731553-8731572 | None:intergenic | 50.0% | |
| CTCAACCCAAGAAAGGCGAA+TGG | - | chr4.2:8731545-8731564 | MS.gene030590:intron | 50.0% | |
| GACTATACCCGAATCAGGAC+TGG | + | chr4.2:8729564-8729583 | None:intergenic | 50.0% | |
| GAGCTTGAGAGCCTTACTGA+GGG | - | chr4.2:8731717-8731736 | MS.gene030590:intron | 50.0% | |
| GCTCCATCTCAACCCAAGAA+AGG | - | chr4.2:8731538-8731557 | MS.gene030590:intron | 50.0% | |
| GCTCGAGCATCAAGCTTCAA+CGG | + | chr4.2:8731694-8731713 | None:intergenic | 50.0% | |
| GGCTGGCAAAGGATGTCATA+TGG | - | chr4.2:8729768-8729787 | MS.gene030590:CDS | 50.0% | |
| GGTCGAGCCATCAGACAAAT+CGG | + | chr4.2:8731673-8731692 | None:intergenic | 50.0% | |
| GTCGAGCCATCAGACAAATC+GGG | + | chr4.2:8731672-8731691 | None:intergenic | 50.0% | |
| TATGTCAGCCTTGGATGCTG+AGG | - | chr4.2:8729481-8729500 | MS.gene030590:intron | 50.0% | |
| TCACAATCACACCTCCCTCT+TGG | + | chr4.2:8730949-8730968 | None:intergenic | 50.0% | |
| TCCGAAAATGCCCTTATGCC+TGG | - | chr4.2:8727929-8727948 | MS.gene030590:CDS | 50.0% | |
| TGAAGCTTGATGCTCGAGCT+AGG | - | chr4.2:8731695-8731714 | MS.gene030590:intron | 50.0% | |
| TGCACCACTTCCGATAGTTG+CGG | - | chr4.2:8731246-8731265 | MS.gene030590:intron | 50.0% | |
| TGGAGAGATGCCGCAACTAT+CGG | + | chr4.2:8731259-8731278 | None:intergenic | 50.0% | |
| TTCGCCCAATCGTACGGTTA+GGG | - | chr4.2:8727700-8727719 | MS.gene030590:CDS | 50.0% | |
| TTTCTCTACTTGGGTCCAGG+TGG | - | chr4.2:8730152-8730171 | MS.gene030590:CDS | 50.0% | |
| ! | AAGGCACCATGAGAACCAGT+GGG | + | chr4.2:8730430-8730449 | None:intergenic | 50.0% |
| ! | AGAGGGAGGTGTGATTGTGA+TGG | - | chr4.2:8730949-8730968 | MS.gene030590:intron | 50.0% |
| ! | ATCTACCCTGAGGCGTCAAA+TGG | - | chr4.2:8730046-8730065 | MS.gene030590:CDS | 50.0% |
| ! | ATTAGAGCACCAAGGGGTGA+TGG | - | chr4.2:8729632-8729651 | MS.gene030590:CDS | 50.0% |
| ! | CCAGGAGAGGCTTTATCGTT+GGG | - | chr4.2:8729704-8729723 | MS.gene030590:CDS | 50.0% |
| ! | GGAAGATGTGGATTGCAGAG+TGG | + | chr4.2:8731299-8731318 | None:intergenic | 50.0% |
| ! | GTGGCTGACTTCAACTTCAG+AGG | + | chr4.2:8731320-8731339 | None:intergenic | 50.0% |
| ! | TCCAGGAGAGGCTTTATCGT+TGG | - | chr4.2:8729703-8729722 | MS.gene030590:CDS | 50.0% |
| ! | TCTACCCTGAGGCGTCAAAT+GGG | - | chr4.2:8730047-8730066 | MS.gene030590:CDS | 50.0% |
| ! | TCTTTCACGGGTTACTTGGC+TGG | - | chr4.2:8729751-8729770 | MS.gene030590:CDS | 50.0% |
| ! | TGAATGCAAAGTGCCCAGCA+TGG | + | chr4.2:8731916-8731935 | None:intergenic | 50.0% |
| !! | TCGCCTTTCTTGGGTTGAGA+TGG | + | chr4.2:8731544-8731563 | None:intergenic | 50.0% |
| !!! | TACGGTGGTTTTAGACGTGC+TGG | - | chr4.2:8729956-8729975 | MS.gene030590:CDS | 50.0% |
| AGTGGGAACACCCAAACCCT+GGG | + | chr4.2:8730413-8730432 | None:intergenic | 55.0% | |
| ATCTGCCCATTTGACGCCTC+AGG | + | chr4.2:8730055-8730074 | None:intergenic | 55.0% | |
| CCCAACGATAAAGCCTCTCC+TGG | + | chr4.2:8729707-8729726 | None:intergenic | 55.0% | |
| GATGCCGCAACTATCGGAAG+TGG | + | chr4.2:8731253-8731272 | None:intergenic | 55.0% | |
| GCTAGCCCATTCGCCTTTCT+TGG | + | chr4.2:8731554-8731573 | None:intergenic | 55.0% | |
| GGAACTGGGTGGAATCCCTT+TGG | - | chr4.2:8731845-8731864 | MS.gene030590:CDS | 55.0% | |
| GGAGCTTGAGAGCCTTACTG+AGG | - | chr4.2:8731716-8731735 | MS.gene030590:intron | 55.0% | |
| GGGTGGAATCCCTTTGGACA+TGG | - | chr4.2:8731851-8731870 | MS.gene030590:CDS | 55.0% | |
| TCTGCCCATTTGACGCCTCA+GGG | + | chr4.2:8730054-8730073 | None:intergenic | 55.0% | |
| TGTTGAGGGAGCTGCTACAC+TGG | - | chr4.2:8730267-8730286 | MS.gene030590:CDS | 55.0% | |
| ! | ACGGGTTACTTGGCTGGCAA+AGG | - | chr4.2:8729757-8729776 | MS.gene030590:CDS | 55.0% |
| ! | TGCAAAGTGCCCAGCATGGT+AGG | + | chr4.2:8731912-8731931 | None:intergenic | 55.0% |
| !! | GAAGGCACCATGAGAACCAG+TGG | + | chr4.2:8730431-8730450 | None:intergenic | 55.0% |
| !! | GGTGTTCCCACTGGTTCTCA+TGG | - | chr4.2:8730421-8730440 | MS.gene030590:intron | 55.0% |
| CAGGGTTTGGGTGTTCCCAC+TGG | - | chr4.2:8730412-8730431 | MS.gene030590:intron | 60.0% | |
| CAGTGGGAACACCCAAACCC+TGG | + | chr4.2:8730414-8730433 | None:intergenic | 60.0% | |
| GCTTCCTTGCCATCACCCCT+TGG | + | chr4.2:8729644-8729663 | None:intergenic | 60.0% | |
| GGTGGAGAACGACAGCGTAC+CGG | - | chr4.2:8727662-8727681 | MS.gene030590:CDS | 60.0% | |
| ! | AGCACCAAGGGGTGATGGCA+AGG | - | chr4.2:8729637-8729656 | MS.gene030590:CDS | 60.0% |
| GGGAACACCCAAACCCTGGG+AGG | + | chr4.2:8730410-8730429 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 8727660 | 8732132 | 8727660 | ID=MS.gene030590 |
| chr4.2 | mRNA | 8727660 | 8732132 | 8727660 | ID=MS.gene030590.t1;Parent=MS.gene030590 |
| chr4.2 | exon | 8732038 | 8732132 | 8732038 | ID=MS.gene030590.t1.exon1;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8732038 | 8732132 | 8732038 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8731842 | 8731933 | 8731842 | ID=MS.gene030590.t1.exon2;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8731842 | 8731933 | 8731842 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8731478 | 8731556 | 8731478 | ID=MS.gene030590.t1.exon3;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8731478 | 8731556 | 8731478 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8729483 | 8730338 | 8729483 | ID=MS.gene030590.t1.exon4;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8729483 | 8730338 | 8729483 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8729244 | 8729377 | 8729244 | ID=MS.gene030590.t1.exon5;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8729244 | 8729377 | 8729244 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8727894 | 8728681 | 8727894 | ID=MS.gene030590.t1.exon6;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8727894 | 8728681 | 8727894 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| chr4.2 | exon | 8727660 | 8727721 | 8727660 | ID=MS.gene030590.t1.exon7;Parent=MS.gene030590.t1 |
| chr4.2 | CDS | 8727660 | 8727721 | 8727660 | ID=cds.MS.gene030590.t1;Parent=MS.gene030590.t1 |
| Gene Sequence |
| Protein sequence |
