AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030815

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030815.t1 MTR_8g090205 94.936 1086 55 0 1 1086 1 1086 0.0 2159
MS.gene030815.t1 MTR_8g090205 94.977 1075 54 0 12 1086 10 1084 0.0 2136
MS.gene030815.t1 MTR_8g090205 94.957 1051 53 0 1 1051 1 1051 0.0 2090
MS.gene030815.t1 MTR_8g090205 95.000 1040 52 0 12 1051 10 1049 0.0 2067
MS.gene030815.t1 MTR_8g090205 94.492 944 52 0 1 944 1 944 0.0 1872
MS.gene030815.t1 MTR_8g090205 94.606 927 50 0 160 1086 1 927 0.0 1827
MS.gene030815.t1 MTR_8g090205 94.619 892 48 0 160 1051 1 892 0.0 1756
MS.gene030815.t1 MTR_2g008840 45.586 1110 499 27 4 1085 6 1038 0.0 851
MS.gene030815.t1 MTR_2g008840 45.531 1074 480 27 40 1085 2 998 0.0 810
MS.gene030815.t1 MTR_2g008840 43.627 965 445 23 4 942 6 897 0.0 686
MS.gene030815.t1 MTR_4g094215 51.032 678 273 12 436 1085 382 1028 0.0 637
MS.gene030815.t1 MTR_4g094215 38.676 287 142 6 7 279 9 275 1.52e-49 191
MS.gene030815.t1 MTR_4g094215 50.665 677 276 11 436 1085 382 1027 0.0 636
MS.gene030815.t1 MTR_4g094215 38.676 287 142 6 7 279 9 275 1.37e-49 191
MS.gene030815.t1 MTR_4g094215 49.159 535 214 11 436 943 382 885 1.33e-151 476
MS.gene030815.t1 MTR_4g094215 38.676 287 142 6 7 279 9 275 1.11e-49 191
MS.gene030815.t1 MTR_8g080800 43.011 558 278 13 498 1040 395 927 2.44e-121 396
MS.gene030815.t1 MTR_8g080800 46.392 194 85 4 12 199 8 188 6.06e-46 180
MS.gene030815.t1 MTR_3g085050 39.855 552 294 9 503 1042 386 911 6.44e-104 348
MS.gene030815.t1 MTR_3g085050 57.377 122 52 0 12 133 8 129 3.24e-42 167
MS.gene030815.t1 MTR_3g085050 39.855 552 294 9 503 1042 386 911 1.61e-103 348
MS.gene030815.t1 MTR_3g085050 57.377 122 52 0 12 133 8 129 4.14e-42 167
MS.gene030815.t1 MTR_4g121840 33.078 653 383 18 434 1073 280 891 3.11e-86 298
MS.gene030815.t1 MTR_4g121840 55.963 109 45 1 46 151 30 138 2.65e-25 114
MS.gene030815.t1 MTR_4g121840 33.078 653 383 18 434 1073 310 921 3.57e-86 299
MS.gene030815.t1 MTR_4g121840 53.147 143 64 1 12 151 26 168 1.75e-34 143
MS.gene030815.t1 MTR_8g090200 61.004 259 84 5 121 366 14 268 2.47e-84 280
MS.gene030815.t1 MTR_8g090200 74.150 147 38 0 458 604 268 414 3.94e-66 229
MS.gene030815.t1 MTR_2g034650 33.065 620 370 14 434 1039 297 885 5.22e-84 293
MS.gene030815.t1 MTR_2g034650 47.647 170 80 2 12 181 25 185 1.01e-40 163
MS.gene030815.t1 MTR_4g123740 61.017 59 22 1 74 132 6 63 1.71e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030815.t1 AT2G22300 47.477 1110 457 28 5 1082 7 1022 0.0 903
MS.gene030815.t1 AT2G22300 47.477 1110 457 28 5 1082 7 1022 0.0 903
MS.gene030815.t1 AT5G64220 45.513 1092 499 29 3 1067 5 1027 0.0 850
MS.gene030815.t1 AT5G64220 45.513 1092 499 29 3 1067 5 1027 0.0 850
MS.gene030815.t1 AT2G22300 47.448 1058 430 28 57 1082 1 964 0.0 843
MS.gene030815.t1 AT5G09410 49.629 673 291 14 436 1082 231 881 0.0 617
MS.gene030815.t1 AT5G09410 49.629 673 291 14 436 1082 352 1002 0.0 616
MS.gene030815.t1 AT5G09410 62.963 162 58 2 12 173 17 176 3.07e-57 215
MS.gene030815.t1 AT5G09410 49.629 673 291 14 436 1082 411 1061 0.0 616
MS.gene030815.t1 AT5G09410 53.125 192 58 3 12 173 76 265 5.31e-52 199
MS.gene030815.t1 AT5G09410 49.629 673 291 14 436 1082 334 984 0.0 616
MS.gene030815.t1 AT5G09410 62.963 162 58 2 12 173 17 176 2.88e-57 215
MS.gene030815.t1 AT1G67310 40.391 562 287 11 501 1040 442 977 5.23e-105 353
MS.gene030815.t1 AT1G67310 47.333 150 69 1 12 161 37 176 3.61e-39 158
MS.gene030815.t1 AT3G16940 32.154 622 369 14 434 1039 217 801 4.69e-79 277
MS.gene030815.t1 AT3G16940 55.645 124 55 0 16 139 1 124 3.82e-37 151
MS.gene030815.t1 AT3G16940 32.154 622 369 14 434 1039 244 828 7.12e-79 277
MS.gene030815.t1 AT3G16940 54.688 128 58 0 12 139 24 151 2.88e-38 155
MS.gene030815.t1 AT3G16940 30.667 525 319 13 434 942 244 739 1.80e-54 204
MS.gene030815.t1 AT3G16940 54.688 128 58 0 12 139 24 151 1.43e-38 155

Find 213 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTATTGGGTTCTGTTTC+AGG 0.110677 4.2:-11219945 None:intergenic
TCCAACATTGTTAATGTATT+TGG 0.116953 4.2:-11219826 None:intergenic
GATAGGGGACAGTTAGAATA+AGG 0.169692 4.2:-11219395 None:intergenic
ATTCCCCTTCTAGTGCTTAT+TGG 0.214001 4.2:+11220925 MS.gene030815:CDS
TGTTATAGTTAGTGAGAATT+TGG 0.234871 4.2:-11217498 None:intergenic
GAATACGATGGTGACAAATT+TGG 0.239421 4.2:+11222957 MS.gene030815:CDS
GAAATTTACCTTTGAGAGAT+AGG 0.252450 4.2:-11219412 None:intergenic
ACTATTGATTCCCGTGTTAT+TGG 0.255860 4.2:-11219958 None:intergenic
TGTGAACTCTCAAAAGTTCT+TGG 0.257449 4.2:+11219855 MS.gene030815:CDS
TCTACGTAACATGTTCTAAT+AGG 0.258394 4.2:+11221504 MS.gene030815:CDS
GCAAGATATCTTAGAAAATA+AGG 0.263006 4.2:+11219890 MS.gene030815:CDS
GCCTGAATAGGCACTATCTT+TGG 0.278496 4.2:-11220574 None:intergenic
TTCCCCTTCTAGTGCTTATT+GGG 0.285574 4.2:+11220926 MS.gene030815:CDS
AGCAACAATTGTTGGTTCTA+AGG 0.288908 4.2:-11221960 None:intergenic
ATTTGAAGACTCGGAAATTA+AGG 0.297823 4.2:+11221082 MS.gene030815:CDS
AAAACTATGGGAAGATAATT+TGG 0.298279 4.2:+11223294 MS.gene030815:CDS
CCACCTTCATCTAATACATT+TGG 0.299243 4.2:-11221893 None:intergenic
GTGAACTTTCGCGATGTAAA+TGG 0.307864 4.2:+11221992 MS.gene030815:CDS
ATACCTTCACTTCCCGATAA+TGG 0.312933 4.2:-11218783 None:intergenic
TGAAACTGTCGAGCTTCTTC+AGG 0.320899 4.2:-11220854 None:intergenic
CGTTGATCTTGAAGCATTGT+TGG 0.336518 4.2:+11223952 MS.gene030815:CDS
TTGCTTCCCTCATATCTCTT+GGG 0.341997 4.2:+11222607 MS.gene030815:CDS
CAGCCTTTCTTGGCTACGAT+TGG 0.345539 4.2:+11221936 MS.gene030815:CDS
CCCAAAGATAGTGCCTATTC+AGG 0.346532 4.2:+11220573 MS.gene030815:CDS
GATACAGTTGAAAGCGAAAA+TGG 0.348848 4.2:+11220948 MS.gene030815:CDS
CAGCTGAAGCTGAAGGAAAT+TGG 0.351228 4.2:+11220060 MS.gene030815:CDS
GACAAGTTAAAATCAGATCT+AGG 0.361350 4.2:+11220747 MS.gene030815:CDS
CACCTTCATCTAATACATTT+GGG 0.362638 4.2:-11221892 None:intergenic
GGCATGCATTAAAGTTGCTT+TGG 0.362966 4.2:-11219004 None:intergenic
GGCTATTTCTGAGGGAACTA+TGG 0.368661 4.2:+11223391 MS.gene030815:CDS
ATGAAGCAGAAGATTGTAAA+TGG 0.369204 4.2:+11221384 MS.gene030815:CDS
GTCGGTTGGGATTGTGGAAA+AGG 0.373416 4.2:+11223316 MS.gene030815:CDS
GTTGCTTCCCTCATATCTCT+TGG 0.375690 4.2:+11222606 MS.gene030815:CDS
CTATTGATTCCCGTGTTATT+GGG 0.377443 4.2:-11219957 None:intergenic
ATTCAATAGCCATGCAAATT+CGG 0.381684 4.2:+11219313 MS.gene030815:CDS
AGCTGATCATAGCAAATAGA+TGG 0.386884 4.2:-11221026 None:intergenic
TGAAATTGTGATAGATGATC+AGG 0.393656 4.2:+11219746 MS.gene030815:intron
ATGGATGGACTGCTCTTCAT+TGG 0.403464 4.2:+11222011 MS.gene030815:CDS
ACCAAATACATTAACAATGT+TGG 0.404096 4.2:+11219825 MS.gene030815:CDS
TGGTATTGGTCTCTTGCATC+TGG 0.406003 4.2:-11223530 None:intergenic
CCATGCCCACAACATCCTTC+TGG 0.406110 4.2:+11222654 MS.gene030815:CDS
TTAGAAAAGATGGACATAAC+TGG 0.406867 4.2:+11217711 MS.gene030815:CDS
GGAAGATAATTTGGTCGGTT+GGG 0.407139 4.2:+11223303 MS.gene030815:CDS
CATTCAACAACCTGTGGTAT+TGG 0.408725 4.2:-11223544 None:intergenic
ACGTGAGAGGTCACCAGGTT+AGG 0.411787 4.2:+11223270 MS.gene030815:CDS
ACATCGTTCTAGTCCATTAT+CGG 0.412410 4.2:+11218770 MS.gene030815:CDS
GTATCCCAATAAGCACTAGA+AGG 0.413133 4.2:-11220930 None:intergenic
AATTTGGTCGGTTGGGATTG+TGG 0.413549 4.2:+11223310 MS.gene030815:CDS
GCCGACCTAGCTTCTGCAAA+TGG 0.416041 4.2:+11222687 MS.gene030815:CDS
TTTCCTTGTGAACAGGCCTC+TGG 0.421100 4.2:+11220522 MS.gene030815:intron
TTCACACCAGCAACAATTGT+TGG 0.422507 4.2:-11221968 None:intergenic
CTTCAGAAAACAACTGAAGA+TGG 0.424083 4.2:+11221863 MS.gene030815:CDS
TTAGAACCAACAATTGTTGC+TGG 0.425908 4.2:+11221962 MS.gene030815:CDS
CCTGAATAGGCACTATCTTT+GGG 0.427656 4.2:-11220573 None:intergenic
CATAGTTCTCCAAGTGCACC+TGG 0.428531 4.2:-11220995 None:intergenic
AACTGAGATACAAGAAAATC+AGG 0.429890 4.2:+11223571 MS.gene030815:CDS
GAATATGAAGAAGCTGAATC+AGG 0.434942 4.2:+11219135 MS.gene030815:CDS
CATTGATTATTCCCCAAGTT+GGG 0.435352 4.2:+11221058 MS.gene030815:CDS
ATAGGGGACAGTTAGAATAA+GGG 0.437858 4.2:-11219394 None:intergenic
GGGAAGATAATTTGGTCGGT+TGG 0.442560 4.2:+11223302 MS.gene030815:CDS
GCCAGTGAATCTTTCATTGA+AGG 0.442930 4.2:-11222852 None:intergenic
CAATTTCCTTCAGCTTCAGC+TGG 0.443285 4.2:-11220059 None:intergenic
CGTGTTGCAGCAACATGAAC+AGG 0.444655 4.2:-11223053 None:intergenic
AAATTTACCTTTGAGAGATA+GGG 0.446563 4.2:-11219411 None:intergenic
AGTTGATCATGTACAAGTTC+TGG 0.447402 4.2:-11221800 None:intergenic
AATGCGAAGTCACACAAGTC+TGG 0.449069 4.2:+11223017 MS.gene030815:CDS
TCATTGATTATTCCCCAAGT+TGG 0.450073 4.2:+11221057 MS.gene030815:CDS
TATTCCTTCCCAGGTGCACT+TGG 0.450888 4.2:+11220986 MS.gene030815:CDS
ACAACAGAGAACACTATTCC+TGG 0.452005 4.2:-11221447 None:intergenic
AGCCTTTCTTGGCTACGATT+GGG 0.452371 4.2:+11221937 MS.gene030815:CDS
TGTAAATGGTCATGCATGTT+CGG 0.458202 4.2:+11221398 MS.gene030815:CDS
GAGTCTTCAAATGCCCAACT+TGG 0.460974 4.2:-11221071 None:intergenic
AGTAAAATCAGTTCTTTGCT+TGG 0.461341 4.2:+11221719 MS.gene030815:CDS
CAGTTCTTTGCTTGGTAGGA+AGG 0.462643 4.2:+11221727 MS.gene030815:CDS
TTAGAACATGTTACGTAGAA+AGG 0.466234 4.2:-11221500 None:intergenic
AATGGACACAAAGGAATTGC+TGG 0.466727 4.2:+11222705 MS.gene030815:CDS
ATATTACGTTGGCGTCGAAA+AGG 0.469061 4.2:+11223341 MS.gene030815:CDS
ACGAGATACTTTAGAAAAGA+TGG 0.469912 4.2:+11217701 MS.gene030815:CDS
GAAGTCTCTGCCTCTGTGTT+AGG 0.470588 4.2:-11219078 None:intergenic
ACCTCAACACAAGGCTGGAC+GGG 0.474522 4.2:+11221475 MS.gene030815:CDS
TCTCAAGGATATGAGACAAT+GGG 0.476448 4.2:+11219984 MS.gene030815:CDS
CCCGAGGGAAGTCATGCTCT+TGG 0.481194 4.2:-11221655 None:intergenic
ATATCTCTTGGGGCAGCACC+AGG 0.481476 4.2:+11222618 MS.gene030815:CDS
ATTCCAGAGAAAACAACAAA+AGG 0.481483 4.2:+11222935 MS.gene030815:CDS
CCCAAGAGCATGACTTCCCT+CGG 0.481534 4.2:+11221654 MS.gene030815:CDS
TGGATGGACTGCTCTTCATT+GGG 0.482883 4.2:+11222012 MS.gene030815:CDS
CCGAGGGAAGTCATGCTCTT+GGG 0.487143 4.2:-11221654 None:intergenic
GGGATCGATAAAAGCCTAGT+TGG 0.487311 4.2:+11220768 MS.gene030815:CDS
CTCACACGATGAGCCTGAAT+AGG 0.489940 4.2:-11220586 None:intergenic
CTAGTTCTTTACTCATCCAT+CGG 0.491817 4.2:-11220878 None:intergenic
GGCTCACGTGAGAGGTCACC+AGG 0.496633 4.2:+11223265 MS.gene030815:intron
GTTTCAGGAAAAGACTGAAA+AGG 0.498768 4.2:-11219930 None:intergenic
TGCTTCCCTCATATCTCTTG+GGG 0.499217 4.2:+11222608 MS.gene030815:CDS
TTGGTAGGAAGGACGATGAA+TGG 0.501312 4.2:+11221738 MS.gene030815:CDS
AAATCAGTTCTTTGCTTGGT+AGG 0.505479 4.2:+11221723 MS.gene030815:CDS
CGTTGGCGTCGAAAAGGTAG+TGG 0.510926 4.2:+11223347 MS.gene030815:CDS
TTCAGAACAAGTTTCGCAGT+TGG 0.512320 4.2:+11223078 MS.gene030815:CDS
AGTCTTCAAATGCCCAACTT+GGG 0.512638 4.2:-11221070 None:intergenic
CCAGAAGGATGTTGTGGGCA+TGG 0.516822 4.2:-11222654 None:intergenic
ACCTTCAATGAAAGATTCAC+TGG 0.517231 4.2:+11222851 MS.gene030815:CDS
TTTGTTGGTGTGTATGAAGA+AGG 0.517240 4.2:-11220674 None:intergenic
AATTTCTTCAATATCTGTTG+TGG 0.517632 4.2:-11217431 None:intergenic
AAGGTTGCCTGTCATTCCTC+AGG 0.518272 4.2:+11219770 MS.gene030815:CDS
CATGGATCAGTAAGTGCTCC+TGG 0.519816 4.2:-11222636 None:intergenic
TGGTAGGAAGGACGATGAAT+GGG 0.520017 4.2:+11221739 MS.gene030815:CDS
CAGTACAACTATTCCTTCCC+AGG 0.520858 4.2:+11220977 MS.gene030815:CDS
GAACAAGTTTCGCAGTTGGA+AGG 0.521020 4.2:+11223082 MS.gene030815:CDS
CATCGTTCTAGTCCATTATC+GGG 0.523240 4.2:+11218771 MS.gene030815:CDS
CTTCTTGAGTATAATTGACT+CGG 0.525223 4.2:-11221559 None:intergenic
TGTGTCCATTTGCAGAAGCT+AGG 0.527068 4.2:-11222692 None:intergenic
GGCCCAATCGTAGCCAAGAA+AGG 0.527167 4.2:-11221939 None:intergenic
GATATCTTAGAAAATAAGGC+TGG 0.527732 4.2:+11219894 MS.gene030815:CDS
TAGTTATAGTGACAATGAGC+AGG 0.528100 4.2:+11220611 MS.gene030815:CDS
ACAAGTTAAAATCAGATCTA+GGG 0.529700 4.2:+11220748 MS.gene030815:CDS
TTCAGAAAACAACTGAAGAT+GGG 0.530144 4.2:+11221864 MS.gene030815:CDS
AAGTGCCGGCAGAGATAACC+AGG 0.530702 4.2:+11221429 MS.gene030815:CDS
TTCTCCAAGTGCACCTGGGA+AGG 0.531264 4.2:-11220990 None:intergenic
CTATTCCTGGTTATCTCTGC+CGG 0.532774 4.2:-11221434 None:intergenic
GGCCCAAATGTATTAGATGA+AGG 0.533133 4.2:+11221890 MS.gene030815:CDS
GCACTTGGAGAACTATGTAC+TGG 0.534994 4.2:+11221001 MS.gene030815:CDS
TTCTACCAGAAGGATGTTGT+GGG 0.536843 4.2:-11222659 None:intergenic
CAAATCAGAGGCTATTTCTG+AGG 0.541683 4.2:+11223382 MS.gene030815:CDS
GTGCTGCCCCAAGAGATATG+AGG 0.541703 4.2:-11222614 None:intergenic
AACAAGTTTCGCAGTTGGAA+GGG 0.542396 4.2:+11223083 MS.gene030815:CDS
CACCTCAACACAAGGCTGGA+CGG 0.542743 4.2:+11221474 MS.gene030815:CDS
AGCTCGACAGTTTCAACCGA+TGG 0.542906 4.2:+11220862 MS.gene030815:CDS
ACCCGTCCAGCCTTGTGTTG+AGG 0.545426 4.2:-11221476 None:intergenic
TCATCCACCTGAGGAATGAC+AGG 0.545608 4.2:-11219777 None:intergenic
TATTACAAGCACAATATCGA+TGG 0.548796 4.2:+11217455 MS.gene030815:CDS
GAGTGTCTTCTATTCCAACT+AGG 0.550195 4.2:-11220782 None:intergenic
AGTGTATCTGTGGCAGAAGA+GGG 0.550559 4.2:+11220831 MS.gene030815:CDS
TTTGCAGAAGCTAGGTCGGC+TGG 0.551088 4.2:-11222684 None:intergenic
AGAATTTGGCAAATTTCAGC+CGG 0.551681 4.2:-11217484 None:intergenic
TGAAGCTGAAGGAAATTGGC+AGG 0.551960 4.2:+11220064 MS.gene030815:CDS
TGGAAAAGGTTATATTACGT+TGG 0.554077 4.2:+11223330 MS.gene030815:CDS
TATCCCAATAAGCACTAGAA+GGG 0.554536 4.2:-11220929 None:intergenic
AATTTACCTTTGAGAGATAG+GGG 0.555076 4.2:-11219410 None:intergenic
CGATGGATGAGTAAAGAACT+AGG 0.555800 4.2:+11220879 MS.gene030815:CDS
AAGTGTATCTGTGGCAGAAG+AGG 0.556458 4.2:+11220830 MS.gene030815:CDS
TTTATACCAGCTGAAGCTGA+AGG 0.559293 4.2:+11220053 MS.gene030815:CDS
GCAGGAAGCAAACTGAGAAA+AGG 0.561949 4.2:+11223465 MS.gene030815:CDS
GTATTAGATGAAGGTGGCCA+AGG 0.562370 4.2:+11221899 MS.gene030815:CDS
AAATCAGAGGCTATTTCTGA+GGG 0.564813 4.2:+11223383 MS.gene030815:CDS
ACAATATCGATGGCTACGTC+CGG 0.566740 4.2:+11217465 MS.gene030815:CDS
TTGTATGTTTGTTGATCACA+AGG 0.569291 4.2:-11219048 None:intergenic
AAGTTGGGCATTTGAAGACT+CGG 0.569405 4.2:+11221073 MS.gene030815:CDS
CTGCAAAATGAAGCACACCT+TGG 0.570206 4.2:-11221916 None:intergenic
TCCATTTGCAGAAGCTAGGT+CGG 0.576737 4.2:-11222688 None:intergenic
GTCTTCAAATGCCCAACTTG+GGG 0.578425 4.2:-11221069 None:intergenic
TATACACCTCAACACAAGGC+TGG 0.578694 4.2:+11221470 MS.gene030815:CDS
ATACTGTTTAGTAATGCTGA+TGG 0.578753 4.2:-11220018 None:intergenic
GCTAATTTCTAAGTGGCTGT+AGG 0.578993 4.2:-11223992 None:intergenic
AACTGTCCCCTATCTCTCAA+AGG 0.580934 4.2:+11219404 MS.gene030815:CDS
GGCACTATCTTTGGGCCATG+TGG 0.581003 4.2:-11220565 None:intergenic
GGAATCAATAGTACTTCTCA+AGG 0.582466 4.2:+11219969 MS.gene030815:CDS
CCAAGAGCATGACTTCCCTC+GGG 0.583296 4.2:+11221655 MS.gene030815:CDS
GTTCGGCGAGATAGAAGTGC+CGG 0.585098 4.2:+11221415 MS.gene030815:CDS
CTATGGGAAGATAATTTGGT+CGG 0.585590 4.2:+11223298 MS.gene030815:CDS
TCATACACACCAACAAAACA+AGG 0.587677 4.2:+11220680 MS.gene030815:CDS
GAAGCAAACTGAGAAAAGGT+TGG 0.588658 4.2:+11223469 MS.gene030815:CDS
TTCTCAAGGATATGAGACAA+TGG 0.588805 4.2:+11219983 MS.gene030815:CDS
TGCTGCCCCAAGAGATATGA+GGG 0.589348 4.2:-11222613 None:intergenic
GTTCTACCAGAAGGATGTTG+TGG 0.592131 4.2:-11222660 None:intergenic
TTATTATAGGCTCACGTGAG+AGG 0.593673 4.2:+11223257 MS.gene030815:intron
AGTAGAAATCCGAATTTGCA+TGG 0.594305 4.2:-11219322 None:intergenic
TAAAAGATAAACTACATGCA+TGG 0.594674 4.2:+11221837 MS.gene030815:CDS
CCATTGACTTCACTCTAGCA+AGG 0.595945 4.2:-11223499 None:intergenic
TTGCACTGCTACTACGCCCA+TGG 0.597003 4.2:+11218030 MS.gene030815:CDS
CGAAAAGGTAGTGGTTTGCG+TGG 0.599858 4.2:+11223356 MS.gene030815:CDS
CATTGACTTCACTCTAGCAA+GGG 0.600713 4.2:-11223498 None:intergenic
CCTTGCTAGAGTGAAGTCAA+TGG 0.603870 4.2:+11223499 MS.gene030815:CDS
TTGTTATACACCTCAACACA+AGG 0.604166 4.2:+11221466 MS.gene030815:CDS
ATTCTTTAAGCGCATCCACA+TGG 0.606620 4.2:+11220550 MS.gene030815:CDS
AGAAACATGAGAGAAACCGT+TGG 0.609159 4.2:+11222780 MS.gene030815:CDS
GACTCTATTAAGTGTATCTG+TGG 0.611735 4.2:+11220821 MS.gene030815:CDS
ATTGCTGCTTCTGATCTCAC+CGG 0.611990 4.2:-11221591 None:intergenic
ACTCAAGAAGTCAACACTGC+CGG 0.614091 4.2:+11221572 MS.gene030815:CDS
AGTCCATTATCGGGAAGTGA+AGG 0.615277 4.2:+11218780 MS.gene030815:CDS
TCGGCTGGTGTTCTACCAGA+AGG 0.617785 4.2:-11222669 None:intergenic
TTGTGATAGATGATCAGGAA+AGG 0.618020 4.2:+11219751 MS.gene030815:intron
GTTGCCTGTCATTCCTCAGG+TGG 0.619752 4.2:+11219773 MS.gene030815:CDS
CTATTCAGGCTCATCGTGTG+AGG 0.626917 4.2:+11220587 MS.gene030815:CDS
ATGAAGAAGGAACTGTTCCA+AGG 0.628051 4.2:-11220661 None:intergenic
ACTTTCGCGATGTAAATGGA+TGG 0.628820 4.2:+11221996 MS.gene030815:CDS
TCTGAGGGAACTATGGTACA+AGG 0.629731 4.2:+11223398 MS.gene030815:CDS
GATGGACGCTAATTTCTAAG+TGG 0.633815 4.2:-11223999 None:intergenic
TGACCACTGTTAATGCTAGA+CGG 0.638659 4.2:-11219105 None:intergenic
ATCCCAATAAGCACTAGAAG+GGG 0.640484 4.2:-11220928 None:intergenic
GCTTCTGCAAATGGACACAA+AGG 0.643597 4.2:+11222696 MS.gene030815:CDS
GGAAGCTCATGAGAGACTCA+AGG 0.645990 4.2:+11217763 MS.gene030815:CDS
TGAAACAGAACCCAATAACA+CGG 0.650306 4.2:+11219947 MS.gene030815:CDS
AAAACAACTGAAGATGGGAA+AGG 0.651527 4.2:+11221869 MS.gene030815:CDS
TAATCGAATCTAAATCCCGA+GGG 0.653442 4.2:-11221670 None:intergenic
CCAAATGTATTAGATGAAGG+TGG 0.656043 4.2:+11221893 MS.gene030815:CDS
ATGCAAGAGACCAATACCAC+AGG 0.658465 4.2:+11223534 MS.gene030815:CDS
CTAATCGAATCTAAATCCCG+AGG 0.658480 4.2:-11221671 None:intergenic
GAAACAGAACCCAATAACAC+GGG 0.662228 4.2:+11219948 MS.gene030815:CDS
ACGAACTTACTGGATGCTTG+AGG 0.663844 4.2:+11218077 MS.gene030815:CDS
TTACCGTCTAGCATTAACAG+TGG 0.677007 4.2:+11219102 MS.gene030815:CDS
GAAAAGATGGACATAACTGG+AGG 0.677852 4.2:+11217714 MS.gene030815:CDS
ATGGACTGCTCTTCATTGGG+CGG 0.678377 4.2:+11222015 MS.gene030815:CDS
AAACAACAAAAGGAATACGA+TGG 0.685779 4.2:+11222945 MS.gene030815:CDS
TTTGCGTGGATTCAAATCAG+AGG 0.685933 4.2:+11223370 MS.gene030815:CDS
TTACAACATTCAACAACCTG+TGG 0.686006 4.2:-11223550 None:intergenic
AAAATCGTAGTCATCCTCAG+TGG 0.687131 4.2:-11223432 None:intergenic
ATAGTTCTCCAAGTGCACCT+GGG 0.691663 4.2:-11220994 None:intergenic
CTCAAGGATATGAGACAATG+GGG 0.695507 4.2:+11219985 MS.gene030815:CDS
ATACTTGGAGGCATATACGA+AGG 0.704350 4.2:-11217541 None:intergenic
GCTTAAAGAATTAAAACCAG+AGG 0.714724 4.2:-11220538 None:intergenic
CAAAGTTATGCCTAACACAG+AGG 0.717841 4.2:+11219068 MS.gene030815:CDS
AGTAAGATATCATCCACCTG+AGG 0.729515 4.2:-11219786 None:intergenic
AGGTGTATCATCTTCCACTG+AGG 0.765631 4.2:+11223418 MS.gene030815:CDS
ACAATGCTTCAAGATCAACG+AGG 0.891821 4.2:-11223949 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGTTATTAAAAAAACA+TGG + chr4.2:11221231-11221250 MS.gene030815:intron 10.0%
!! AATAAATAATTTATAATCCT+TGG + chr4.2:11218174-11218193 MS.gene030815:intron 10.0%
!!! AAATTATTTAGTTTTAAATC+AGG + chr4.2:11220222-11220241 MS.gene030815:intron 10.0%
!! ATATTAAAATAGATACAAGA+AGG - chr4.2:11219268-11219287 None:intergenic 15.0%
!! GAAGAATAAAAAAATAAAGA+AGG - chr4.2:11219239-11219258 None:intergenic 15.0%
!!! AACATATCTTTCTAATTTTA+CGG + chr4.2:11217951-11217970 MS.gene030815:intron 15.0%
!!! GAAATTGCTAATTTTTTTTT+TGG + chr4.2:11218666-11218685 MS.gene030815:intron 15.0%
!!! TTTCAATTTTACAATTAGTA+TGG - chr4.2:11219731-11219750 None:intergenic 15.0%
!! AAAACATATAGTGTGAAATT+TGG - chr4.2:11223639-11223658 None:intergenic 20.0%
!! AATTAAATGATATTAACTGC+TGG - chr4.2:11223821-11223840 None:intergenic 20.0%
!! ACATTCTTAGTAACAATTTA+AGG + chr4.2:11218885-11218904 MS.gene030815:intron 20.0%
!! ATAATAAGTTAGAGGATTAA+AGG - chr4.2:11223244-11223263 None:intergenic 20.0%
!! GTTACAACTTTAATCTAAAT+TGG + chr4.2:11217840-11217859 MS.gene030815:intron 20.0%
!! TCATATGTTATTCAATGTAA+TGG - chr4.2:11217983-11218002 None:intergenic 20.0%
!! TGATTAATAAAATTCCGTTA+AGG + chr4.2:11218223-11218242 MS.gene030815:intron 20.0%
!! TTAATCCTCTAACTTATTAT+AGG + chr4.2:11223244-11223263 MS.gene030815:intron 20.0%
!! TTTATATATTCCGATAATGT+TGG + chr4.2:11219673-11219692 MS.gene030815:intron 20.0%
!!! AAAAATTTAAAGACTAGTCA+AGG + chr4.2:11220405-11220424 MS.gene030815:intron 20.0%
!!! ACTACTAATATCAATTTTAC+AGG + chr4.2:11221328-11221347 MS.gene030815:intron 20.0%
!!! ATTAGATTCTTCATTTTCTT+TGG - chr4.2:11219028-11219047 None:intergenic 20.0%
!!! ATTGCTAATTTTTTTTTTGG+TGG + chr4.2:11218669-11218688 MS.gene030815:intron 20.0%
!!! CAACAATTTATTTTGATGTA+CGG + chr4.2:11219453-11219472 MS.gene030815:intron 20.0%
!!! CTTTTAAAAGTATTTCATGA+GGG - chr4.2:11220722-11220741 None:intergenic 20.0%
!!! GAATACCTATATTACTTTTA+AGG - chr4.2:11218959-11218978 None:intergenic 20.0%
!!! GATACTTTTAATAAACGATT+TGG + chr4.2:11221620-11221639 MS.gene030815:CDS 20.0%
!!! GTATAAGTTGTTATTACAAT+TGG - chr4.2:11218341-11218360 None:intergenic 20.0%
!!! TGATTTTTCAATTTTCATTG+AGG + chr4.2:11222548-11222567 MS.gene030815:intron 20.0%
!!! TTACTAGTTTATCAGAAATA+CGG + chr4.2:11223704-11223723 MS.gene030815:intron 20.0%
!!! TTTTATGAATTGTGATGTTT+TGG + chr4.2:11217631-11217650 MS.gene030815:intron 20.0%
! AAAAAGATGGAAAAACTGTT+AGG + chr4.2:11217741-11217760 MS.gene030815:CDS 25.0%
! AAAACTATGGGAAGATAATT+TGG + chr4.2:11223294-11223313 MS.gene030815:CDS 25.0%
! AAAAGATGGAAAAACTGTTA+GGG + chr4.2:11217742-11217761 MS.gene030815:CDS 25.0%
! AATATGCTTCATTTCATCAT+AGG + chr4.2:11222251-11222270 MS.gene030815:intron 25.0%
! AATGTCATTAAAATCAATCC+TGG + chr4.2:11217905-11217924 MS.gene030815:intron 25.0%
! AATTTCTTCAATATCTGTTG+TGG - chr4.2:11217434-11217453 None:intergenic 25.0%
! ACAAGTTAAAATCAGATCTA+GGG + chr4.2:11220748-11220767 MS.gene030815:CDS 25.0%
! ACCAAATACATTAACAATGT+TGG + chr4.2:11219825-11219844 MS.gene030815:CDS 25.0%
! ATACATGATTGATCGATAAA+AGG - chr4.2:11219509-11219528 None:intergenic 25.0%
! ATATGCTTCATTTCATCATA+GGG + chr4.2:11222252-11222271 MS.gene030815:intron 25.0%
! ATTAAAATCAATCCTGGAAT+AGG + chr4.2:11217911-11217930 MS.gene030815:intron 25.0%
! CTGTATAAAATATGTGAAAC+AGG + chr4.2:11222187-11222206 MS.gene030815:intron 25.0%
! GAATCAGAATTAATCATACT+TGG - chr4.2:11217559-11217578 None:intergenic 25.0%
! GCAAGATATCTTAGAAAATA+AGG + chr4.2:11219890-11219909 MS.gene030815:CDS 25.0%
! TAAAAGATAAACTACATGCA+TGG + chr4.2:11221837-11221856 MS.gene030815:CDS 25.0%
! TACATGATTGATCGATAAAA+GGG - chr4.2:11219508-11219527 None:intergenic 25.0%
! TAGAATTACATGCTTTAACT+AGG - chr4.2:11218636-11218655 None:intergenic 25.0%
! TCCAACATTGTTAATGTATT+TGG - chr4.2:11219829-11219848 None:intergenic 25.0%
! TGACAATACATGAAACTAAT+AGG + chr4.2:11222121-11222140 MS.gene030815:intron 25.0%
! TGCTCATTTAAATAATCGAA+GGG + chr4.2:11222450-11222469 MS.gene030815:intron 25.0%
! TGTTATAGTTAGTGAGAATT+TGG - chr4.2:11217501-11217520 None:intergenic 25.0%
! TTAAAAAAACATGGTATCCA+TGG + chr4.2:11221240-11221259 MS.gene030815:intron 25.0%
! TTTAGTGTGAGATTTGAAAA+TGG - chr4.2:11218121-11218140 None:intergenic 25.0%
! TTTGTACATAATTCATGCAA+AGG - chr4.2:11223173-11223192 None:intergenic 25.0%
!! AAATTTACCTTTGAGAGATA+GGG - chr4.2:11219414-11219433 None:intergenic 25.0%
!! ATACCTAAGGTTTTTATCTT+AGG - chr4.2:11217813-11217832 None:intergenic 25.0%
!! GAATAACATATGATGTTTTC+AGG + chr4.2:11217990-11218009 MS.gene030815:intron 25.0%
!! GCATTTTACTTTCATTATCA+GGG + chr4.2:11222575-11222594 MS.gene030815:intron 25.0%
!! TACTAGTTTATCAGAAATAC+GGG + chr4.2:11223705-11223724 MS.gene030815:intron 25.0%
!! TGCATTTTACTTTCATTATC+AGG + chr4.2:11222574-11222593 MS.gene030815:intron 25.0%
!!! ACATATAATTTTTCAGTGCT+TGG + chr4.2:11218923-11218942 MS.gene030815:intron 25.0%
!!! GCTTTTAAAAGTATTTCATG+AGG - chr4.2:11220723-11220742 None:intergenic 25.0%
!!! TATTATTTTAGCATACCTCA+CGG - chr4.2:11222372-11222391 None:intergenic 25.0%
!!! TCTAGAATAGAATTTTACTG+CGG - chr4.2:11219620-11219639 None:intergenic 25.0%
AAACAACAAAAGGAATACGA+TGG + chr4.2:11222945-11222964 MS.gene030815:CDS 30.0%
AAAGTGCACTATATTGATGA+CGG + chr4.2:11221285-11221304 MS.gene030815:intron 30.0%
AACCACTTAGTTATAAACCA+AGG - chr4.2:11218194-11218213 None:intergenic 30.0%
AACCATAATGCAAAATCATC+AGG + chr4.2:11223783-11223802 MS.gene030815:intron 30.0%
AACTGAGATACAAGAAAATC+AGG + chr4.2:11223571-11223590 MS.gene030815:CDS 30.0%
ACAGCGAATTGTAAAAATTC+AGG + chr4.2:11223130-11223149 MS.gene030815:CDS 30.0%
AGTAAAATCAGTTCTTTGCT+TGG + chr4.2:11221719-11221738 MS.gene030815:CDS 30.0%
ATACTGTTTAGTAATGCTGA+TGG - chr4.2:11220021-11220040 None:intergenic 30.0%
ATCAAGAATGCAAAACTTAG+AGG + chr4.2:11223729-11223748 MS.gene030815:intron 30.0%
ATCCTTGGTTTATAACTAAG+TGG + chr4.2:11218189-11218208 MS.gene030815:intron 30.0%
ATGAAGCAGAAGATTGTAAA+TGG + chr4.2:11221384-11221403 MS.gene030815:CDS 30.0%
ATTCAATAGCCATGCAAATT+CGG + chr4.2:11219313-11219332 MS.gene030815:CDS 30.0%
ATTCCAGAGAAAACAACAAA+AGG + chr4.2:11222935-11222954 MS.gene030815:CDS 30.0%
ATTTGAAGACTCGGAAATTA+AGG + chr4.2:11221082-11221101 MS.gene030815:CDS 30.0%
CAACCTAAGATAAAAACCTT+AGG + chr4.2:11217807-11217826 MS.gene030815:intron 30.0%
CAAGTGCAGAATATCAAAAT+AGG - chr4.2:11221111-11221130 None:intergenic 30.0%
CACCTTCATCTAATACATTT+GGG - chr4.2:11221895-11221914 None:intergenic 30.0%
CATAGGGTTGAAAAATGAAA+AGG + chr4.2:11222268-11222287 MS.gene030815:intron 30.0%
CTGGTCCTTAAAAGTAATAT+AGG + chr4.2:11218951-11218970 MS.gene030815:intron 30.0%
CTTCTTGAGTATAATTGACT+CGG - chr4.2:11221562-11221581 None:intergenic 30.0%
GACAAGTTAAAATCAGATCT+AGG + chr4.2:11220747-11220766 MS.gene030815:CDS 30.0%
GATATCTTAGAAAATAAGGC+TGG + chr4.2:11219894-11219913 MS.gene030815:CDS 30.0%
GCTCATTTAAATAATCGAAG+GGG + chr4.2:11222451-11222470 MS.gene030815:intron 30.0%
GCTTAAAGAATTAAAACCAG+AGG - chr4.2:11220541-11220560 None:intergenic 30.0%
GTGCTCATTTAAATAATCGA+AGG + chr4.2:11222449-11222468 MS.gene030815:intron 30.0%
GTTCTGTATAAGCTTCAATA+TGG + chr4.2:11220256-11220275 MS.gene030815:intron 30.0%
TACAATTAGTATGGCATGTA+AGG - chr4.2:11219722-11219741 None:intergenic 30.0%
TACATAATTCATGCAAAGGT+TGG - chr4.2:11223169-11223188 None:intergenic 30.0%
TATTACAAGCACAATATCGA+TGG + chr4.2:11217455-11217474 MS.gene030815:CDS 30.0%
TCAGAATTAATCATACTTGG+AGG - chr4.2:11217556-11217575 None:intergenic 30.0%
TCTACGTAACATGTTCTAAT+AGG + chr4.2:11221504-11221523 MS.gene030815:CDS 30.0%
TGAAATTGTGATAGATGATC+AGG + chr4.2:11219746-11219765 MS.gene030815:intron 30.0%
TGAGATTCCATCAAATAACA+AGG - chr4.2:11218846-11218865 None:intergenic 30.0%
TGGAAAAGGTTATATTACGT+TGG + chr4.2:11223330-11223349 MS.gene030815:CDS 30.0%
TGTAACTGTAACAATACCTA+AGG - chr4.2:11217826-11217845 None:intergenic 30.0%
TTAGAAAAGATGGACATAAC+TGG + chr4.2:11217711-11217730 MS.gene030815:CDS 30.0%
TTAGAACATGTTACGTAGAA+AGG - chr4.2:11221503-11221522 None:intergenic 30.0%
TTCAGAAAACAACTGAAGAT+GGG + chr4.2:11221864-11221883 MS.gene030815:CDS 30.0%
TTCAGTTTATTTCCTATTCC+AGG - chr4.2:11217926-11217945 None:intergenic 30.0%
TTGCACAGTTGTGAAAAAAA+TGG - chr4.2:11223665-11223684 None:intergenic 30.0%
TTGGTTTATAACTAAGTGGT+TGG + chr4.2:11218193-11218212 MS.gene030815:intron 30.0%
TTGTATTCGACATTGTTACA+GGG + chr4.2:11218738-11218757 MS.gene030815:intron 30.0%
TTTGTATTCGACATTGTTAC+AGG + chr4.2:11218737-11218756 MS.gene030815:intron 30.0%
! AATTTACCTTTGAGAGATAG+GGG - chr4.2:11219413-11219432 None:intergenic 30.0%
! ACGAGATACTTTAGAAAAGA+TGG + chr4.2:11217701-11217720 MS.gene030815:CDS 30.0%
! AGTTGTTATTACAATTGGAG+AGG - chr4.2:11218336-11218355 None:intergenic 30.0%
! ATTTTACAGGTTCTCATTTC+AGG + chr4.2:11221341-11221360 MS.gene030815:intron 30.0%
! ATTTTCAAAGACGAACTTAC+TGG + chr4.2:11218067-11218086 MS.gene030815:CDS 30.0%
! CTTTTGTAAATGCCTTTTGT+AGG + chr4.2:11223874-11223893 MS.gene030815:intron 30.0%
! GAAATGTGTCATTCTGATAT+TGG + chr4.2:11220116-11220135 MS.gene030815:intron 30.0%
! GAAATTTACCTTTGAGAGAT+AGG - chr4.2:11219415-11219434 None:intergenic 30.0%
! GAATTTTTACAATTCGCTGT+CGG - chr4.2:11223130-11223149 None:intergenic 30.0%
! TCTTAATTTTCCTTGTGAAC+AGG + chr4.2:11220515-11220534 MS.gene030815:intron 30.0%
! TTGTATGTTTGTTGATCACA+AGG - chr4.2:11219051-11219070 None:intergenic 30.0%
! TTTTCTCTCTTTTTCTTCCA+TGG - chr4.2:11221260-11221279 None:intergenic 30.0%
! TTTTTCCATAACAAAAACGC+AGG - chr4.2:11222303-11222322 None:intergenic 30.0%
!! AAAAGGCATTTACAAAAGAC+TGG - chr4.2:11223872-11223891 None:intergenic 30.0%
!! ACTTTTCTTGTTTGATCGAA+AGG + chr4.2:11217676-11217695 MS.gene030815:CDS 30.0%
!! AGTTGATTTTCAACAATCCT+TGG + chr4.2:11220644-11220663 MS.gene030815:CDS 30.0%
!! TCTTTCTCCTTGTTATTTGA+TGG + chr4.2:11218836-11218855 MS.gene030815:intron 30.0%
!! TGAATTGTGATGTTTTGGAT+TGG + chr4.2:11217636-11217655 MS.gene030815:intron 30.0%
!! TTAAAAGAGTGTGACTTTTG+AGG + chr4.2:11219539-11219558 MS.gene030815:intron 30.0%
!!! AATTGTCATTTTGTTCTCCA+TGG - chr4.2:11218050-11218069 None:intergenic 30.0%
!!! ATTCCTTTTGTTGTTTTCTC+TGG - chr4.2:11222941-11222960 None:intergenic 30.0%
!!! ATTGTCATTTTGTTCTCCAT+GGG - chr4.2:11218049-11218068 None:intergenic 30.0%
!!! GACTACGATTTTTTGAAAGA+AGG + chr4.2:11223443-11223462 MS.gene030815:CDS 30.0%
!!! TAAGCATTTTAACTTCTGCT+AGG - chr4.2:11222213-11222232 None:intergenic 30.0%
AAAACAACTGAAGATGGGAA+AGG + chr4.2:11221869-11221888 MS.gene030815:CDS 35.0%
AAATCAGTTCTTTGCTTGGT+AGG + chr4.2:11221723-11221742 MS.gene030815:CDS 35.0%
AACCATGTCTGCAAGTAAAA+TGG + chr4.2:11220162-11220181 MS.gene030815:intron 35.0%
AACTGGAGGAAGAAAAAAGA+TGG + chr4.2:11217728-11217747 MS.gene030815:CDS 35.0%
ACAACAGTTCAGTGAACATA+TGG - chr4.2:11221144-11221163 None:intergenic 35.0%
ACATCCCTAACAAATAAAGG+TGG + chr4.2:11222421-11222440 MS.gene030815:intron 35.0%
ACATCGTTCTAGTCCATTAT+CGG + chr4.2:11218770-11218789 MS.gene030815:CDS 35.0%
ACCAGGTTAGGAAAAACTAT+GGG + chr4.2:11223282-11223301 MS.gene030815:CDS 35.0%
ACCTTCAATGAAAGATTCAC+TGG + chr4.2:11222851-11222870 MS.gene030815:CDS 35.0%
ACGACATCCCTAACAAATAA+AGG + chr4.2:11222418-11222437 MS.gene030815:intron 35.0%
AGAATTTGGCAAATTTCAGC+CGG - chr4.2:11217487-11217506 None:intergenic 35.0%
AGAGAACGATTTGACCTTAA+CGG - chr4.2:11218240-11218259 None:intergenic 35.0%
AGCTGATCATAGCAAATAGA+TGG - chr4.2:11221029-11221048 None:intergenic 35.0%
AGTAGAAATCCGAATTTGCA+TGG - chr4.2:11219325-11219344 None:intergenic 35.0%
AGTGAACATATGGTCAAAAC+TGG - chr4.2:11221134-11221153 None:intergenic 35.0%
AGTTGATCATGTACAAGTTC+TGG - chr4.2:11221803-11221822 None:intergenic 35.0%
ATAGGGGACAGTTAGAATAA+GGG - chr4.2:11219397-11219416 None:intergenic 35.0%
ATTAAGCGCTTATTCAGACA+AGG - chr4.2:11218385-11218404 None:intergenic 35.0%
ATTGTCAAAGTGTATCGTGT+TGG - chr4.2:11222108-11222127 None:intergenic 35.0%
CAATACCAATATGTGTGAGA+TGG - chr4.2:11218480-11218499 None:intergenic 35.0%
CCAAATGTATTAGATGAAGG+TGG + chr4.2:11221893-11221912 MS.gene030815:CDS 35.0%
CCACCTTCATCTAATACATT+TGG - chr4.2:11221896-11221915 None:intergenic 35.0%
CTATGGGAAGATAATTTGGT+CGG + chr4.2:11223298-11223317 MS.gene030815:CDS 35.0%
CTTCAGAAAACAACTGAAGA+TGG + chr4.2:11221863-11221882 MS.gene030815:CDS 35.0%
GAATACGATGGTGACAAATT+TGG + chr4.2:11222957-11222976 MS.gene030815:CDS 35.0%
GAATATGAAGAAGCTGAATC+AGG + chr4.2:11219135-11219154 MS.gene030815:CDS 35.0%
GACTCTATTAAGTGTATCTG+TGG + chr4.2:11220821-11220840 MS.gene030815:CDS 35.0%
GAGCAGTTAAATGAGTTTGA+TGG - chr4.2:11220486-11220505 None:intergenic 35.0%
GATACAGTTGAAAGCGAAAA+TGG + chr4.2:11220948-11220967 MS.gene030815:CDS 35.0%
GATCTTGCTTTACCTACAAA+AGG - chr4.2:11223889-11223908 None:intergenic 35.0%
GGAATCAATAGTACTTCTCA+AGG + chr4.2:11219969-11219988 MS.gene030815:CDS 35.0%
GGCTATTCAAAAAGTTCTCT+AGG - chr4.2:11219218-11219237 None:intergenic 35.0%
GGGTTGAAAAATGAAAAGGT+TGG + chr4.2:11222272-11222291 MS.gene030815:intron 35.0%
GTATTGCTGATCACATGTAT+TGG - chr4.2:11218594-11218613 None:intergenic 35.0%
GTGAGCCTATAATAAGTTAG+AGG - chr4.2:11223252-11223271 None:intergenic 35.0%
GTTTCAGGAAAAGACTGAAA+AGG - chr4.2:11219933-11219952 None:intergenic 35.0%
TAATCGAATCTAAATCCCGA+GGG - chr4.2:11221673-11221692 None:intergenic 35.0%
TAGTTATAGTGACAATGAGC+AGG + chr4.2:11220611-11220630 MS.gene030815:CDS 35.0%
TATCCCAATAAGCACTAGAA+GGG - chr4.2:11220932-11220951 None:intergenic 35.0%
TCATACACACCAACAAAACA+AGG + chr4.2:11220680-11220699 MS.gene030815:CDS 35.0%
TCTCAAGGATATGAGACAAT+GGG + chr4.2:11219984-11220003 MS.gene030815:CDS 35.0%
TGAAACAGAACCCAATAACA+CGG + chr4.2:11219947-11219966 MS.gene030815:CDS 35.0%
TGGGATATTTAAGCATACCT+CGG + chr4.2:11222478-11222497 MS.gene030815:intron 35.0%
TGTAAATGGTCATGCATGTT+CGG + chr4.2:11221398-11221417 MS.gene030815:CDS 35.0%
TGTGAACTCTCAAAAGTTCT+TGG + chr4.2:11219855-11219874 MS.gene030815:CDS 35.0%
TTACAACATTCAACAACCTG+TGG - chr4.2:11223553-11223572 None:intergenic 35.0%
TTACTTTCATTATCAGGGAG+AGG + chr4.2:11222580-11222599 MS.gene030815:intron 35.0%
TTAGAACCAACAATTGTTGC+TGG + chr4.2:11221962-11221981 MS.gene030815:CDS 35.0%
TTCTCAAGGATATGAGACAA+TGG + chr4.2:11219983-11220002 MS.gene030815:CDS 35.0%
TTGTGATAGATGATCAGGAA+AGG + chr4.2:11219751-11219770 MS.gene030815:intron 35.0%
TTGTTATACACCTCAACACA+AGG + chr4.2:11221466-11221485 MS.gene030815:CDS 35.0%
TTTGTTGGTGTGTATGAAGA+AGG - chr4.2:11220677-11220696 None:intergenic 35.0%
! AAGTACCTGCGTTTTTGTTA+TGG + chr4.2:11222295-11222314 MS.gene030815:intron 35.0%
! ATCCATTTTACTTGCAGACA+TGG - chr4.2:11220167-11220186 None:intergenic 35.0%
! CAGACAAGGCTTTAACATAA+AGG - chr4.2:11218371-11218390 None:intergenic 35.0%
! CATTGATTATTCCCCAAGTT+GGG + chr4.2:11221058-11221077 MS.gene030815:CDS 35.0%
! CTAGTTCTTTACTCATCCAT+CGG - chr4.2:11220881-11220900 None:intergenic 35.0%
! CTCACCACCTTTATTTGTTA+GGG - chr4.2:11222428-11222447 None:intergenic 35.0%
! GCTTTAATCTTTTGAACAGC+AGG - chr4.2:11219368-11219387 None:intergenic 35.0%
! GTCCTGATGATTTTGCATTA+TGG - chr4.2:11223788-11223807 None:intergenic 35.0%
! GTCGTGTCTTTTAAATACAC+AGG - chr4.2:11222403-11222422 None:intergenic 35.0%
! TCATTGATTATTCCCCAAGT+TGG + chr4.2:11221057-11221076 MS.gene030815:CDS 35.0%
! TCTCACCACCTTTATTTGTT+AGG - chr4.2:11222429-11222448 None:intergenic 35.0%
! TTTTCAGTGCTTGGTAAATC+TGG + chr4.2:11218932-11218951 MS.gene030815:intron 35.0%
! TTTTCTTCATTTGCTCTGCA+TGG - chr4.2:11218504-11218523 None:intergenic 35.0%
!! AAAGAAGTACTTCCAGAGAT+AGG - chr4.2:11218697-11218716 None:intergenic 35.0%
!! AAATCAGAGGCTATTTCTGA+GGG + chr4.2:11223383-11223402 MS.gene030815:CDS 35.0%
!! AACATATGATGTTTTCAGGC+TGG + chr4.2:11217994-11218013 MS.gene030815:intron 35.0%
!! AAGTTCTTGGCTTTTCATCA+TGG + chr4.2:11219868-11219887 MS.gene030815:CDS 35.0%
!! ACTATTGATTCCCGTGTTAT+TGG - chr4.2:11219961-11219980 None:intergenic 35.0%
!! AGCAACAATTGTTGGTTCTA+AGG - chr4.2:11221963-11221982 None:intergenic 35.0%
!! AGCACTCATTGTTTTGTTCT+CGG - chr4.2:11222821-11222840 None:intergenic 35.0%
!! CATCTTCAGTTGTTTTCTGA+AGG - chr4.2:11221865-11221884 None:intergenic 35.0%
!! CTATTGATTCCCGTGTTATT+GGG - chr4.2:11219960-11219979 None:intergenic 35.0%
!!! ACGATTTTTTGAAAGAAGGC+AGG + chr4.2:11223447-11223466 MS.gene030815:CDS 35.0%
!!! GACTCTTTGTTTTGTTCCAA+CGG - chr4.2:11222799-11222818 None:intergenic 35.0%
!!! GCATAAGAACCTTGTTTTGT+TGG - chr4.2:11220692-11220711 None:intergenic 35.0%
!!! GTTTTGGATTGGTTGACAAT+AGG + chr4.2:11217647-11217666 MS.gene030815:intron 35.0%
!!! TCTCTGGAAGTACTTCTTTT+AGG + chr4.2:11218698-11218717 MS.gene030815:intron 35.0%
!!! TGATCAAGTTTTTTCCTCCA+GGG + chr4.2:11218979-11218998 MS.gene030815:intron 35.0%
AAAAATCACGAGTCTCACGT+TGG - chr4.2:11222536-11222555 None:intergenic 40.0%
AAAATCGTAGTCATCCTCAG+TGG - chr4.2:11223435-11223454 None:intergenic 40.0%
AACAAGTTTCGCAGTTGGAA+GGG + chr4.2:11223083-11223102 MS.gene030815:CDS 40.0%
AAGTTGGGCATTTGAAGACT+CGG + chr4.2:11221073-11221092 MS.gene030815:CDS 40.0%
AATGGACACAAAGGAATTGC+TGG + chr4.2:11222705-11222724 MS.gene030815:CDS 40.0%
ACAACAGAGAACACTATTCC+TGG - chr4.2:11221450-11221469 None:intergenic 40.0%
ACAATGCTTCAAGATCAACG+AGG - chr4.2:11223952-11223971 None:intergenic 40.0%
ACTTTCGCGATGTAAATGGA+TGG + chr4.2:11221996-11222015 MS.gene030815:CDS 40.0%
AGAAACATGAGAGAAACCGT+TGG + chr4.2:11222780-11222799 MS.gene030815:CDS 40.0%
AGTAAGATATCATCCACCTG+AGG - chr4.2:11219789-11219808 None:intergenic 40.0%
AGTCTTCAAATGCCCAACTT+GGG - chr4.2:11221073-11221092 None:intergenic 40.0%
ATACCTTCACTTCCCGATAA+TGG - chr4.2:11218786-11218805 None:intergenic 40.0%
ATCCCAATAAGCACTAGAAG+GGG - chr4.2:11220931-11220950 None:intergenic 40.0%
ATGAAGAAGGAACTGTTCCA+AGG - chr4.2:11220664-11220683 None:intergenic 40.0%
ATTCCCCTTCTAGTGCTTAT+TGG + chr4.2:11220925-11220944 MS.gene030815:CDS 40.0%
ATTCTTTAAGCGCATCCACA+TGG + chr4.2:11220550-11220569 MS.gene030815:CDS 40.0%
ATTTAAGCATACCTCGGGAA+AGG + chr4.2:11222484-11222503 MS.gene030815:intron 40.0%
CAAACTTAGTGACGTAGCAA+TGG + chr4.2:11219566-11219585 MS.gene030815:intron 40.0%
CAAAGTTATGCCTAACACAG+AGG + chr4.2:11219068-11219087 MS.gene030815:CDS 40.0%
CACCAGGTTAGGAAAAACTA+TGG + chr4.2:11223281-11223300 MS.gene030815:CDS 40.0%
CATCGTTCTAGTCCATTATC+GGG + chr4.2:11218771-11218790 MS.gene030815:CDS 40.0%
CATTCAACAACCTGTGGTAT+TGG - chr4.2:11223547-11223566 None:intergenic 40.0%
CCTGAATAGGCACTATCTTT+GGG - chr4.2:11220576-11220595 None:intergenic 40.0%
CGATGGATGAGTAAAGAACT+AGG + chr4.2:11220879-11220898 MS.gene030815:CDS 40.0%
CTAATCGAATCTAAATCCCG+AGG - chr4.2:11221674-11221693 None:intergenic 40.0%
CTCAAGGATATGAGACAATG+GGG + chr4.2:11219985-11220004 MS.gene030815:CDS 40.0%
GAAAAGATGGACATAACTGG+AGG + chr4.2:11217714-11217733 MS.gene030815:CDS 40.0%
GAAACAGAACCCAATAACAC+GGG + chr4.2:11219948-11219967 MS.gene030815:CDS 40.0%
GAAGCAAACTGAGAAAAGGT+TGG + chr4.2:11223469-11223488 MS.gene030815:CDS 40.0%
GACTCACTACAAAGTGATGT+TGG + chr4.2:11220315-11220334 MS.gene030815:intron 40.0%
GAGTGTCTTCTATTCCAACT+AGG - chr4.2:11220785-11220804 None:intergenic 40.0%
GATAGGGGACAGTTAGAATA+AGG - chr4.2:11219398-11219417 None:intergenic 40.0%
GATCCAAAGGCCAACATTAT+CGG - chr4.2:11219686-11219705 None:intergenic 40.0%
GATGCATTTGTTCTTGCTTG+AGG + chr4.2:11218553-11218572 MS.gene030815:intron 40.0%
GCCAGTGAATCTTTCATTGA+AGG - chr4.2:11222855-11222874 None:intergenic 40.0%
GGAAGATAATTTGGTCGGTT+GGG + chr4.2:11223303-11223322 MS.gene030815:CDS 40.0%
GGCATGCATTAAAGTTGCTT+TGG - chr4.2:11219007-11219026 None:intergenic 40.0%
GGCCCAAATGTATTAGATGA+AGG + chr4.2:11221890-11221909 MS.gene030815:CDS 40.0%
GGGATATTTAAGCATACCTC+GGG + chr4.2:11222479-11222498 MS.gene030815:intron 40.0%
GTATCCCAATAAGCACTAGA+AGG - chr4.2:11220933-11220952 None:intergenic 40.0%
GTGAACTTTCGCGATGTAAA+TGG + chr4.2:11221992-11222011 MS.gene030815:CDS 40.0%
TAAGATCTTGCCTGATCCAA+AGG - chr4.2:11219699-11219718 None:intergenic 40.0%
TATGGTTCAGCAGATGATTC+AGG - chr4.2:11223770-11223789 None:intergenic 40.0%
TGAAGGAAATTGGCAGGTAT+GGG + chr4.2:11220070-11220089 MS.gene030815:intron 40.0%
TGACCACTGTTAATGCTAGA+CGG - chr4.2:11219108-11219127 None:intergenic 40.0%
TGTCTCCATCTCACACATAT+TGG + chr4.2:11218472-11218491 MS.gene030815:intron 40.0%
TTACCGTCTAGCATTAACAG+TGG + chr4.2:11219102-11219121 MS.gene030815:CDS 40.0%
TTATTATAGGCTCACGTGAG+AGG + chr4.2:11223257-11223276 MS.gene030815:intron 40.0%
TTCACACCAGCAACAATTGT+TGG - chr4.2:11221971-11221990 None:intergenic 40.0%
TTCAGAACAAGTTTCGCAGT+TGG + chr4.2:11223078-11223097 MS.gene030815:CDS 40.0%
TTCCCCTTCTAGTGCTTATT+GGG + chr4.2:11220926-11220945 MS.gene030815:CDS 40.0%
TTCTACCAGAAGGATGTTGT+GGG - chr4.2:11222662-11222681 None:intergenic 40.0%
TTGCTTCCCTCATATCTCTT+GGG + chr4.2:11222607-11222626 MS.gene030815:CDS 40.0%
TTTATACCAGCTGAAGCTGA+AGG + chr4.2:11220053-11220072 MS.gene030815:CDS 40.0%
TTTGCGTGGATTCAAATCAG+AGG + chr4.2:11223370-11223389 MS.gene030815:CDS 40.0%
! AAATAATCGAAGGGGTGTGT+GGG + chr4.2:11222459-11222478 MS.gene030815:intron 40.0%
! AAGGCAGAAACTTTGAAGGA+GGG - chr4.2:11218443-11218462 None:intergenic 40.0%
! ATACTTGGAGGCATATACGA+AGG - chr4.2:11217544-11217563 None:intergenic 40.0%
! ATATTACGTTGGCGTCGAAA+AGG + chr4.2:11223341-11223360 MS.gene030815:CDS 40.0%
! CTTCATTTTGCAGCCTTTCT+TGG + chr4.2:11221926-11221945 MS.gene030815:CDS 40.0%
! GTGTTATTGGGTTCTGTTTC+AGG - chr4.2:11219948-11219967 None:intergenic 40.0%
! TAAATAATCGAAGGGGTGTG+TGG + chr4.2:11222458-11222477 MS.gene030815:intron 40.0%
! TCACGTTGGACTCTTTTCAT+GGG - chr4.2:11222522-11222541 None:intergenic 40.0%
! TCCCATAGTTTTTCCTAACC+TGG - chr4.2:11223286-11223305 None:intergenic 40.0%
! TGGACTCTTTTCATGGGAAA+TGG - chr4.2:11222516-11222535 None:intergenic 40.0%
! TTAAAGTTGCTTTGGTTCCC+TGG - chr4.2:11218999-11219018 None:intergenic 40.0%
!! ATAATGTTGGCCTTTGGATC+AGG + chr4.2:11219686-11219705 MS.gene030815:intron 40.0%
!! ATTCCGATAATGTTGGCCTT+TGG + chr4.2:11219680-11219699 MS.gene030815:intron 40.0%
!! CAAATCAGAGGCTATTTCTG+AGG + chr4.2:11223382-11223401 MS.gene030815:CDS 40.0%
!! CATTGACTTCACTCTAGCAA+GGG - chr4.2:11223501-11223520 None:intergenic 40.0%
!! CGTTGATCTTGAAGCATTGT+TGG + chr4.2:11223952-11223971 MS.gene030815:CDS 40.0%
!! TTGGATTGGTTGACAATAGG+TGG + chr4.2:11217650-11217669 MS.gene030815:intron 40.0%
!! TTTTTGGTGGTTCCTATCTC+TGG + chr4.2:11218682-11218701 MS.gene030815:intron 40.0%
!!! CTGATCAAGTTTTTTCCTCC+AGG + chr4.2:11218978-11218997 MS.gene030815:intron 40.0%
AACTGTCCCCTATCTCTCAA+AGG + chr4.2:11219404-11219423 MS.gene030815:CDS 45.0%
AAGTGTATCTGTGGCAGAAG+AGG + chr4.2:11220830-11220849 MS.gene030815:CDS 45.0%
AATGCGAAGTCACACAAGTC+TGG + chr4.2:11223017-11223036 MS.gene030815:CDS 45.0%
AATTGCACTCATCTTCCGTG+AGG + chr4.2:11222354-11222373 MS.gene030815:intron 45.0%
AATTTGGTCGGTTGGGATTG+TGG + chr4.2:11223310-11223329 MS.gene030815:CDS 45.0%
ACAATATCGATGGCTACGTC+CGG + chr4.2:11217465-11217484 MS.gene030815:CDS 45.0%
ACGAACTTACTGGATGCTTG+AGG + chr4.2:11218077-11218096 MS.gene030815:CDS 45.0%
ACTCAAGAAGTCAACACTGC+CGG + chr4.2:11221572-11221591 MS.gene030815:CDS 45.0%
AGCCTTTCTTGGCTACGATT+GGG + chr4.2:11221937-11221956 MS.gene030815:CDS 45.0%
AGGCAAGGCAGAAACTTTGA+AGG - chr4.2:11218447-11218466 None:intergenic 45.0%
AGGTGTATCATCTTCCACTG+AGG + chr4.2:11223418-11223437 MS.gene030815:CDS 45.0%
AGTCCATTATCGGGAAGTGA+AGG + chr4.2:11218780-11218799 MS.gene030815:CDS 45.0%
AGTGTATCTGTGGCAGAAGA+GGG + chr4.2:11220831-11220850 MS.gene030815:CDS 45.0%
ATAGTTCTCCAAGTGCACCT+GGG - chr4.2:11220997-11221016 None:intergenic 45.0%
ATGCAAGAGACCAATACCAC+AGG + chr4.2:11223534-11223553 MS.gene030815:CDS 45.0%
CAATTTCCTTCAGCTTCAGC+TGG - chr4.2:11220062-11220081 None:intergenic 45.0%
CAGCTGAAGCTGAAGGAAAT+TGG + chr4.2:11220060-11220079 MS.gene030815:CDS 45.0%
CAGTACAACTATTCCTTCCC+AGG + chr4.2:11220977-11220996 MS.gene030815:CDS 45.0%
CAGTTCTTTGCTTGGTAGGA+AGG + chr4.2:11221727-11221746 MS.gene030815:CDS 45.0%
CCCAAAGATAGTGCCTATTC+AGG + chr4.2:11220573-11220592 MS.gene030815:CDS 45.0%
CCTTGCTAGAGTGAAGTCAA+TGG + chr4.2:11223499-11223518 MS.gene030815:CDS 45.0%
CTATTCCTGGTTATCTCTGC+CGG - chr4.2:11221437-11221456 None:intergenic 45.0%
CTGAAGGAAATTGGCAGGTA+TGG + chr4.2:11220069-11220088 MS.gene030815:intron 45.0%
CTGCAAAATGAAGCACACCT+TGG - chr4.2:11221919-11221938 None:intergenic 45.0%
CTTAGTGACGTAGCAATGGA+TGG + chr4.2:11219570-11219589 MS.gene030815:intron 45.0%
GAACAAGTTTCGCAGTTGGA+AGG + chr4.2:11223082-11223101 MS.gene030815:CDS 45.0%
GAGTCTTCAAATGCCCAACT+TGG - chr4.2:11221074-11221093 None:intergenic 45.0%
GCACTTGGAGAACTATGTAC+TGG + chr4.2:11221001-11221020 MS.gene030815:CDS 45.0%
GCAGGAAGCAAACTGAGAAA+AGG + chr4.2:11223465-11223484 MS.gene030815:CDS 45.0%
GCCTGAATAGGCACTATCTT+TGG - chr4.2:11220577-11220596 None:intergenic 45.0%
GCTTCTGCAAATGGACACAA+AGG + chr4.2:11222696-11222715 MS.gene030815:CDS 45.0%
GGGAAGATAATTTGGTCGGT+TGG + chr4.2:11223302-11223321 MS.gene030815:CDS 45.0%
GGGATCGATAAAAGCCTAGT+TGG + chr4.2:11220768-11220787 MS.gene030815:CDS 45.0%
GTATTAGATGAAGGTGGCCA+AGG + chr4.2:11221899-11221918 MS.gene030815:CDS 45.0%
GTCTTCAAATGCCCAACTTG+GGG - chr4.2:11221072-11221091 None:intergenic 45.0%
GTTCAGCAGATGATTCAGGT+GGG - chr4.2:11223766-11223785 None:intergenic 45.0%
GTTCTACCAGAAGGATGTTG+TGG - chr4.2:11222663-11222682 None:intergenic 45.0%
GTTGCTTCCCTCATATCTCT+TGG + chr4.2:11222606-11222625 MS.gene030815:CDS 45.0%
TATACACCTCAACACAAGGC+TGG + chr4.2:11221470-11221489 MS.gene030815:CDS 45.0%
TCCATTTGCAGAAGCTAGGT+CGG - chr4.2:11222691-11222710 None:intergenic 45.0%
TCTGAGGGAACTATGGTACA+AGG + chr4.2:11223398-11223417 MS.gene030815:CDS 45.0%
TGAAACTGTCGAGCTTCTTC+AGG - chr4.2:11220857-11220876 None:intergenic 45.0%
TGAAGCTGAAGGAAATTGGC+AGG + chr4.2:11220064-11220083 MS.gene030815:CDS 45.0%
TGCTTCCCTCATATCTCTTG+GGG + chr4.2:11222608-11222627 MS.gene030815:CDS 45.0%
TGGTAGGAAGGACGATGAAT+GGG + chr4.2:11221739-11221758 MS.gene030815:CDS 45.0%
TGTGTCCATTTGCAGAAGCT+AGG - chr4.2:11222695-11222714 None:intergenic 45.0%
TTGGTAGGAAGGACGATGAA+TGG + chr4.2:11221738-11221757 MS.gene030815:CDS 45.0%
! AAAGACTGGCTAAGCTTTGC+TGG - chr4.2:11223858-11223877 None:intergenic 45.0%
! ATTGCTGCTTCTGATCTCAC+CGG - chr4.2:11221594-11221613 None:intergenic 45.0%
! CAAGGCAGAAACTTTGAAGG+AGG - chr4.2:11218444-11218463 None:intergenic 45.0%
! CTCACGTTGGACTCTTTTCA+TGG - chr4.2:11222523-11222542 None:intergenic 45.0%
!! ATGGATGGACTGCTCTTCAT+TGG + chr4.2:11222011-11222030 MS.gene030815:CDS 45.0%
!! ATGTTTTCAGGCTGGAAGTG+TGG + chr4.2:11218002-11218021 MS.gene030815:intron 45.0%
!! CCATTGACTTCACTCTAGCA+AGG - chr4.2:11223502-11223521 None:intergenic 45.0%
!! GGCTATTTCTGAGGGAACTA+TGG + chr4.2:11223391-11223410 MS.gene030815:CDS 45.0%
!! TGGATGGACTGCTCTTCATT+GGG + chr4.2:11222012-11222031 MS.gene030815:CDS 45.0%
!! TGGTATTGGTCTCTTGCATC+TGG - chr4.2:11223533-11223552 None:intergenic 45.0%
AAACCAGAGGCCTGTTCACA+AGG - chr4.2:11220528-11220547 None:intergenic 50.0%
AAGGTTGCCTGTCATTCCTC+AGG + chr4.2:11219770-11219789 MS.gene030815:CDS 50.0%
AGCTCGACAGTTTCAACCGA+TGG + chr4.2:11220862-11220881 MS.gene030815:CDS 50.0%
CAGCCTTTCTTGGCTACGAT+TGG + chr4.2:11221936-11221955 MS.gene030815:CDS 50.0%
CATAGTTCTCCAAGTGCACC+TGG - chr4.2:11220998-11221017 None:intergenic 50.0%
CATGGATCAGTAAGTGCTCC+TGG - chr4.2:11222639-11222658 None:intergenic 50.0%
CGTGTTGCAGCAACATGAAC+AGG - chr4.2:11223056-11223075 None:intergenic 50.0%
CTATTCAGGCTCATCGTGTG+AGG + chr4.2:11220587-11220606 MS.gene030815:CDS 50.0%
CTCACACGATGAGCCTGAAT+AGG - chr4.2:11220589-11220608 None:intergenic 50.0%
GAAGTCTCTGCCTCTGTGTT+AGG - chr4.2:11219081-11219100 None:intergenic 50.0%
GGAAGCTCATGAGAGACTCA+AGG + chr4.2:11217763-11217782 MS.gene030815:CDS 50.0%
GGTTCAGCAGATGATTCAGG+TGG - chr4.2:11223767-11223786 None:intergenic 50.0%
GTCGGTTGGGATTGTGGAAA+AGG + chr4.2:11223316-11223335 MS.gene030815:CDS 50.0%
TATTCCTTCCCAGGTGCACT+TGG + chr4.2:11220986-11221005 MS.gene030815:CDS 50.0%
TCATCCACCTGAGGAATGAC+AGG - chr4.2:11219780-11219799 None:intergenic 50.0%
TGCTGCCCCAAGAGATATGA+GGG - chr4.2:11222616-11222635 None:intergenic 50.0%
TGTGAGATGGAGACAAAGCG+AGG - chr4.2:11218467-11218486 None:intergenic 50.0%
TTTCCTTGTGAACAGGCCTC+TGG + chr4.2:11220522-11220541 MS.gene030815:intron 50.0%
! AAGTTGCTTTGGTTCCCTGG+AGG - chr4.2:11218996-11219015 None:intergenic 50.0%
! ATGGACTGCTCTTCATTGGG+CGG + chr4.2:11222015-11222034 MS.gene030815:CDS 50.0%
! CGAAAAGGTAGTGGTTTGCG+TGG + chr4.2:11223356-11223375 MS.gene030815:CDS 50.0%
ACCTCAACACAAGGCTGGAC+GGG + chr4.2:11221475-11221494 MS.gene030815:CDS 55.0%
ACGTGAGAGGTCACCAGGTT+AGG + chr4.2:11223270-11223289 MS.gene030815:CDS 55.0%
ATATCTCTTGGGGCAGCACC+AGG + chr4.2:11222618-11222637 MS.gene030815:CDS 55.0%
CACCTCAACACAAGGCTGGA+CGG + chr4.2:11221474-11221493 MS.gene030815:CDS 55.0%
CCAGAAGGATGTTGTGGGCA+TGG - chr4.2:11222657-11222676 None:intergenic 55.0%
CCATGCCCACAACATCCTTC+TGG + chr4.2:11222654-11222673 MS.gene030815:CDS 55.0%
CCGAGGGAAGTCATGCTCTT+GGG - chr4.2:11221657-11221676 None:intergenic 55.0%
GATGGAGACAAAGCGAGGCA+AGG - chr4.2:11218462-11218481 None:intergenic 55.0%
GCCGACCTAGCTTCTGCAAA+TGG + chr4.2:11222687-11222706 MS.gene030815:CDS 55.0%
GGCACTATCTTTGGGCCATG+TGG - chr4.2:11220568-11220587 None:intergenic 55.0%
GGCCCAATCGTAGCCAAGAA+AGG - chr4.2:11221942-11221961 None:intergenic 55.0%
GTGCTGCCCCAAGAGATATG+AGG - chr4.2:11222617-11222636 None:intergenic 55.0%
GTTGCCTGTCATTCCTCAGG+TGG + chr4.2:11219773-11219792 MS.gene030815:CDS 55.0%
TCGGCTGGTGTTCTACCAGA+AGG - chr4.2:11222672-11222691 None:intergenic 55.0%
TTCTCCAAGTGCACCTGGGA+AGG - chr4.2:11220993-11221012 None:intergenic 55.0%
TTGCACTGCTACTACGCCCA+TGG + chr4.2:11218030-11218049 MS.gene030815:CDS 55.0%
TTTGCAGAAGCTAGGTCGGC+TGG - chr4.2:11222687-11222706 None:intergenic 55.0%
! CCAAGAGCATGACTTCCCTC+GGG + chr4.2:11221655-11221674 MS.gene030815:CDS 55.0%
! CCCAAGAGCATGACTTCCCT+CGG + chr4.2:11221654-11221673 MS.gene030815:CDS 55.0%
! CGTTGGCGTCGAAAAGGTAG+TGG + chr4.2:11223347-11223366 MS.gene030815:CDS 55.0%
! CTTCATTGGGCGGCGTTTTG+TGG + chr4.2:11222025-11222044 MS.gene030815:CDS 55.0%
! GTTCGGCGAGATAGAAGTGC+CGG + chr4.2:11221415-11221434 MS.gene030815:CDS 55.0%
!! AAGTGCCGGCAGAGATAACC+AGG + chr4.2:11221429-11221448 MS.gene030815:CDS 55.0%
AATGGCTCTCGCCTTTCCCG+AGG - chr4.2:11222498-11222517 None:intergenic 60.0%
CCCGAGGGAAGTCATGCTCT+TGG - chr4.2:11221658-11221677 None:intergenic 60.0%
! ACCCGTCCAGCCTTGTGTTG+AGG - chr4.2:11221479-11221498 None:intergenic 60.0%
! ATTGGGCGGCGTTTTGTGGC+AGG + chr4.2:11222029-11222048 MS.gene030815:CDS 60.0%
GGCTCACGTGAGAGGTCACC+AGG + chr4.2:11223265-11223284 MS.gene030815:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 11217406 11224006 11217406 ID=MS.gene030815
chr4.2 mRNA 11217406 11224006 11217406 ID=MS.gene030815.t1;Parent=MS.gene030815
chr4.2 exon 11217406 11217559 11217406 ID=MS.gene030815.t1.exon1;Parent=MS.gene030815.t1
chr4.2 CDS 11217406 11217559 11217406 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11217669 11217784 11217669 ID=MS.gene030815.t1.exon2;Parent=MS.gene030815.t1
chr4.2 CDS 11217669 11217784 11217669 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11218012 11218100 11218012 ID=MS.gene030815.t1.exon3;Parent=MS.gene030815.t1
chr4.2 CDS 11218012 11218100 11218012 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11218759 11218801 11218759 ID=MS.gene030815.t1.exon4;Parent=MS.gene030815.t1
chr4.2 CDS 11218759 11218801 11218759 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11219000 11219156 11219000 ID=MS.gene030815.t1.exon5;Parent=MS.gene030815.t1
chr4.2 CDS 11219000 11219156 11219000 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11219312 11219425 11219312 ID=MS.gene030815.t1.exon6;Parent=MS.gene030815.t1
chr4.2 CDS 11219312 11219425 11219312 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11219760 11220085 11219760 ID=MS.gene030815.t1.exon7;Parent=MS.gene030815.t1
chr4.2 CDS 11219760 11220085 11219760 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11220537 11221103 11220537 ID=MS.gene030815.t1.exon8;Parent=MS.gene030815.t1
chr4.2 CDS 11220537 11221103 11220537 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11221350 11222050 11221350 ID=MS.gene030815.t1.exon9;Parent=MS.gene030815.t1
chr4.2 CDS 11221350 11222050 11221350 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11222596 11223151 11222596 ID=MS.gene030815.t1.exon10;Parent=MS.gene030815.t1
chr4.2 CDS 11222596 11223151 11222596 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11223266 11223592 11223266 ID=MS.gene030815.t1.exon11;Parent=MS.gene030815.t1
chr4.2 CDS 11223266 11223592 11223266 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
chr4.2 exon 11223896 11224006 11223896 ID=MS.gene030815.t1.exon12;Parent=MS.gene030815.t1
chr4.2 CDS 11223896 11224006 11223896 ID=cds.MS.gene030815.t1;Parent=MS.gene030815.t1
Gene Sequence

>MS.gene030815

ATGTCTAATTCATATACTATGATTGCCACAACAGATATTGAAGAAATTTTATTACAAGCACAATATCGATGGCTACGTCCGGCTGAAATTTGCCAAATTCTCACTAACTATAACAGCTTTCAGATTTCTTCGCAACCTTCGTATATGCCTCCAAGTATGATTAATTCTGATTCTAATTTCTTAATAGCTCTTTTTGTTTCGAGATCTTTATTATAAGCAGAATGCTTTTATGAATTGTGATGTTTTGGATTGGTTGACAATAGGTGGTTCACTTTTCTTGTTTGATCGAAAGGTGACGAGATACTTTAGAAAAGATGGACATAACTGGAGGAAGAAAAAAGATGGAAAAACTGTTAGGGAAGCTCATGAGAGACTCAAGGTATGTACACATATATTTTATTCAACCTAAGATAAAAACCTTAGGTATTGTTACAGTTACAACTTTAATCTAAATTGGAAATAAAACGATAACATAAAAAGACGATGCTGAAATTATTTTAATGTCATTAAAATCAATCCTGGAATAGGAAATAAACTGAATTCAGAACATATCTTTCTAATTTTACGGTATAAACCATTACATTGAATAACATATGATGTTTTCAGGCTGGAAGTGTGGAAGTATTGCACTGCTACTACGCCCATGGAGAACAAAATGACAATTTTCAAAGACGAACTTACTGGATGCTTGAGGAGTAAGTTTTCATGTTTACCATTTTCAAATCTCACACTAAAAAATCTTCATTTCTATTTAATATTTTACAGCTGAATAAATAATTTATAATCCTTGGTTTATAACTAAGTGGTTGGAATCGAGTGATTAATAAAATTCCGTTAAGGTCAAATCGTTCTCTGATAAAATTAAGTTAGACATAGTTATGCAAAGTTTATCATCATTTTTCATGTAAAACAAGTCTGTCTTCATTTCCTCTCCAATTGTAATAACAACTTATACATCAGCTCCTTTATGTTAAAGCCTTGTCTGAATAAGCGCTTAATTACGTTGTTTATCTAAACACTCTATTTGTCTTCTTCCCTCCTTCAAAGTTTCTGCCTTGCCTCGCTTTGTCTCCATCTCACACATATTGGTATTGTCCATGCAGAGCAAATGAAGAAAACTTATACTTTTTTTTCATCTTCATGTTTTGATGCATTTGTTCTTGCTTGAGGATGATATGCTTTAAACCAATACATGTGATCAGCAATACTAGATCTATCTCATTAGTACCTAGTTAAAGCATGTAATTCTACTTGCTTCAAGAAATTGCTAATTTTTTTTTTGGTGGTTCCTATCTCTGGAAGTACTTCTTTTAGGATTTCTCTTTTCACTCTTTGTATTCGACATTGTTACAGGGAACTCTCACACATCGTTCTAGTCCATTATCGGGAAGTGAAGGTATAATGATACAATCATACAGTAGTTTTTATCATCTTTCTCCTTGTTATTTGATGGAATCTCAATAAGAATTTCTTCTTTTTACATTCTTAGTAACAATTTAAGGAACAATGAACTAATGACATATAATTTTTCAGTGCTTGGTAAATCTGGTCCTTAAAAGTAATATAGGTATTCTGATCAAGTTTTTTCCTCCAGGGAACCAAAGCAACTTTAATGCATGCCAAAGAAAATGAAGAATCTAATCCTTGTGATCAACAAACATACAAAGTTATGCCTAACACAGAGGCAGAGACTTCTTTACCGTCTAGCATTAACAGTGGTCAAGCATCAGAATATGAAGAAGCTGAATCAGGTATGTCTTTTTAGCATAGCATTATTCTATTAACGATTTGAAATGTTTTACTGTCGCACCTAGAGAACTTTTTGAATAGCCTTCTTTATTTTTTTATTCTTCAATTCACCTTCTTGTATCTATTTTAATATTGTAACTCGATGTAATGTTTGTAGCATTCAATAGCCATGCAAATTCGGATTTCTACTCTTTTCTTGAGCTGCAACAGCCTGCTGTTCAAAAGATTAAAGCTCAACTCCCTTATTCTAACTGTCCCCTATCTCTCAAAGGTAAATTTCTTCAATTTAAATTATTTTCAACAATTTATTTTGATGTACGGTAAGTGTAAAATAAATTGTATTCATGTTTCCCTTTTATCGATCAATCATGTATTGCTGTGTCATTAAAAGAGTGTGACTTTTGAGGTAATCAAACTTAGTGACGTAGCAATGGATGGTTGAATGAACTGTAATGAATTTCACCGCAGTAAAATTCTATTCTAGAAGAGCATCAAACTTCAAAATTAAATCACTATATTTTATATATTCCGATAATGTTGGCCTTTGGATCAGGCAAGATCTTACCTTACATGCCATACTAATTGTAAAATTGAAATTGTGATAGATGATCAGGAAAGGTTGCCTGTCATTCCTCAGGTGGATGATATCTTACTCAGTCAAGCTAATGAAACCAAATACATTAACAATGTTGGATTGACATGTGAACTCTCAAAAGTTCTTGGCTTTTCATCATGGCAAGATATCTTAGAAAATAAGGCTGGAAGTCATAATGTGCCTTTTCAGTCTTTTCCTGAAACAGAACCCAATAACACGGGAATCAATAGTACTTCTCAAGGATATGAGACAATGGGGCAACATTTAACCATCAGCATTACTAAACAGTATGATAATAGAAGTTTTATACCAGCTGAAGCTGAAGGAAATTGGCAGGTATGGGACTAGTTATACTTATATCGTAAAGAAATGTGTCATTCTGATATTGGTCTGTTTAACTACTTTATGCATCAACCATGTCTGCAAGTAAAATGGATACTTCATTTATTGCATTATTTCATGTTACATAGTAAAATTATTTAGTTTTAAATCAGGATATATAGTCTGTTCTGTATAAGCTTCAATATGGTATTTGTCTTCATATCAAAAGTCAAAATAAACTAATGACTCACTACAAAGTGATGTTGGTTTGATGTTGTGATTTGTAAACACTTGTATGTTTCTGACTGCTTAATTACTTGTTTCGTGTTTCTTCAAAAATTTAAAGACTAGTCAAGGAATGAAGTTTTGCTTTATGCATGAGTAATTCTTAAACATGTAACTTTTTAACTCTCCATCAAACTCATTTAACTGCTCAAAATTAAATCTTAATTTTCCTTGTGAACAGGCCTCTGGTTTTAATTCTTTAAGCGCATCCACATGGCCCAAAGATAGTGCCTATTCAGGCTCATCGTGTGAGGTTAGTTATAGTGACAATGAGCAGGAAGTTAATGAAGTTGATTTTCAACAATCCTTGGAACAGTTCCTTCTTCATACACACCAACAAAACAAGGTTCTTATGCAAAATAGCCCTCATGAAATACTTTTAAAAGCAGAAGACAAGTTAAAATCAGATCTAGGGATCGATAAAAGCCTAGTTGGAATAGAAGACACTCATTTCACTTCAAAGAAGACTCTATTAAGTGTATCTGTGGCAGAAGAGGGCCTGAAGAAGCTCGACAGTTTCAACCGATGGATGAGTAAAGAACTAGGCGATGTCGAAGAATCAAGCAAGCATTCCCCTTCTAGTGCTTATTGGGATACAGTTGAAAGCGAAAATGGTGTTGACAGTACAACTATTCCTTCCCAGGTGCACTTGGAGAACTATGTACTGGATCCATCTATTTGCTATGATCAGCTTTTTAGCATCATTGATTATTCCCCAAGTTGGGCATTTGAAGACTCGGAAATTAAGGTATCCTATTTTGATATTCTGCACTTGCCAGTTTTGACCATATGTTCACTGAACTGTTGTAATATCTGTTATTTTGTTTTTGTTCATCTGTTAGCTATATTCTGATTATCTACTTATTTACATATAAAAAAAGTTATTAAAAAAACATGGTATCCATGGAAGAAAAAGAGAGAAAAGTCTAAAAGTGCACTATATTGATGACGGTAAAATGATACTAATTTCTAACTACTAATATCAATTTTACAGGTTCTCATTTCAGGACGATTCTTAAAGAGTCAACATGAAGCAGAAGATTGTAAATGGTCATGCATGTTCGGCGAGATAGAAGTGCCGGCAGAGATAACCAGGAATAGTGTTCTCTGTTGTTATACACCTCAACACAAGGCTGGACGGGTTCCTTTCTACGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGCGAATTCGATTTCCGAGTCAATTATACTCAAGAAGTCAACACTGCCGGTGAGATCAGAAGCAGCAATACTTATGATACTTTTAATAAACGATTTGGAGAATTGTTGTCCCAAGAGCATGACTTCCCTCGGGATTTAGATTCGATTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTTTGCTTGGTAGGAAGGACGATGAATGGGACGAACTACTTAAATTTACTCTAGACAAAGATTTTTCTCCAGAACTTGTACATGATCAACTGCTTCAAAATCTTGTAAAAGATAAACTACATGCATGGCTCCTTCAGAAAACAACTGAAGATGGGAAAGGCCCAAATGTATTAGATGAAGGTGGCCAAGGTGTGCTTCATTTTGCAGCCTTTCTTGGCTACGATTGGGCCTTAGAACCAACAATTGTTGCTGGTGTGAATGTGAACTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCGGCGTTTTGTGGCAGGTCAGCATCTCAATGCTTTTCATCTAAACTCAATTTATAGTTCATCGTATTACTCCAACACGATACACTTTGACAATACATGAAACTAATAGGATAAACTACTGATCTGAATTGCATCTTTGCAAGAGTGATAGTACTGTATAAAATATGTGAAACAGGCCTAGCAGAAGTTAAAATGCTTACATTTTTTTTTTTTGCTCAATATGCTTCATTTCATCATAGGGTTGAAAAATGAAAAGGTTGGAAGTACCTGCGTTTTTGTTATGGAAAAAAGAATCATACTAGAAACAATGCAAATTGCAAAATTGCACTCATCTTCCGTGAGGTATGCTAAAATAATACATATACTCCTGTGTATTTAAAAGACACGACATCCCTAACAAATAAAGGTGGTGAGAGTGCTCATTTAAATAATCGAAGGGGTGTGTGGGATATTTAAGCATACCTCGGGAAAGGCGAGAGCCATTTCCCATGAAAAGAGTCCAACGTGAGACTCGTGATTTTTCAATTTTCATTGAGGAATTGCATTTTACTTTCATTATCAGGGAGAGGACAGTTGCTTCCCTCATATCTCTTGGGGCAGCACCAGGAGCACTTACTGATCCATGCCCACAACATCCTTCTGGTAGAACACCAGCCGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCTGGTTATCTTGCAGAATCTTTCTTAAGCTCACAACTCAAGTCTCTTGATTTGAAAAGAAACATGAGAGAAACCGTTGGAACAAAACAAAGAGTCCGAGAACAAAACAATGAGTGCTTCTCACATGAACCTTCAATGAAAGATTCACTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTTAGAGTGCAATCATTCCAGAGAAAACAACAAAAGGAATACGATGGTGACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTAATATCAGTGAATGCGAAGTCACACAAGTCTGGACTACGCAATGAGCCTGTTCATGTTGCTGCAACACGTATTCAGAACAAGTTTCGCAGTTGGAAGGGCAGAAAAGATTTTTTGATTATCCGACAGCGAATTGTAAAAATTCAGGTACATATATATTTCCAACCTTTGCATGAATTATGTACAAATGATGTTGCTCTTTTTGTTTGTGTTTAATGTTTGCTAATGCATGCTTTCCTTTAATCCTCTAACTTATTATAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAACTATGGGAAGATAATTTGGTCGGTTGGGATTGTGGAAAAGGTTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTCAAATCAGAGGCTATTTCTGAGGGAACTATGGTACAAGGTGTATCATCTTCCACTGAGGATGACTACGATTTTTTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGAGTGAAGTCAATGGCTCAATATCCAGATGCAAGAGACCAATACCACAGGTTGTTGAATGTTGTAACTGAGATACAAGAAAATCAGGTATGTATCTGTTTAAGAAAAGTATTTTTCTAATGATATGTCGCCAAATTTCACACTATATGTTTTCAGCCATTTTTTTCACAACTGTGCAATCAATCTTGCATGAGATTTTTACTAGTTTATCAGAAATACGGGAATCAAGAATGCAAAACTTAGAGGTTTCTGTTATTCCCACCTGAATCATCTGCTGAACCATAATGCAAAATCATCAGGACTTTCAAAATGCCAGCAGTTAATATCATTTAATTTGTTATTCTGATTGCCAGCAAAGCTTAGCCAGTCTTTTGTAAATGCCTTTTGTAGGTAAAGCAAGATCGAAATTTTATCAATTCAGAAGAAACAAGACAATTCAATAACCTCGTTGATCTTGAAGCATTGTTGGACGAAGATACTTTCATGCCTACAGCCACTTAG
Protein sequence

>MS.gene030815.t1

MSNSYTMIATTDIEEILLQAQYRWLRPAEICQILTNYNSFQISSQPSYMPPSGSLFLFDRKVTRYFRKDGHNWRKKKDGKTVREAHERLKAGSVEVLHCYYAHGEQNDNFQRRTYWMLEEELSHIVLVHYREVKGTKATLMHAKENEESNPCDQQTYKVMPNTEAETSLPSSINSGQASEYEEAESAFNSHANSDFYSFLELQQPAVQKIKAQLPYSNCPLSLKDDQERLPVIPQVDDILLSQANETKYINNVGLTCELSKVLGFSSWQDILENKAGSHNVPFQSFPETEPNNTGINSTSQGYETMGQHLTISITKQYDNRSFIPAEAEGNWQASGFNSLSASTWPKDSAYSGSSCEVSYSDNEQEVNEVDFQQSLEQFLLHTHQQNKVLMQNSPHEILLKAEDKLKSDLGIDKSLVGIEDTHFTSKKTLLSVSVAEEGLKKLDSFNRWMSKELGDVEESSKHSPSSAYWDTVESENGVDSTTIPSQVHLENYVLDPSICYDQLFSIIDYSPSWAFEDSEIKVLISGRFLKSQHEAEDCKWSCMFGEIEVPAEITRNSVLCCYTPQHKAGRVPFYVTCSNRLACSEVREFDFRVNYTQEVNTAGEIRSSNTYDTFNKRFGELLSQEHDFPRDLDSISVNEKSQLRSKISSLLGRKDDEWDELLKFTLDKDFSPELVHDQLLQNLVKDKLHAWLLQKTTEDGKGPNVLDEGGQGVLHFAAFLGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVASLISLGAAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSSQLKSLDLKRNMRETVGTKQRVREQNNECFSHEPSMKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEYDGDKFGISDERALSLISVNAKSHKSGLRNEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNYGKIIWSVGIVEKVILRWRRKGSGLRGFKSEAISEGTMVQGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIQENQVKQDRNFINSEETRQFNNLVDLEALLDEDTFMPTAT