Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030926.t1 | XP_013446690.2 | 97 | 766 | 23 | 0 | 1 | 766 | 1 | 766 | 0.00E+00 | 1165.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030926.t1 | Q9SUI2 | 64.1 | 569 | 194 | 5 | 196 | 764 | 194 | 752 | 1.8e-195 | 684.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030926.t1 | A0A072TU52 | 97.0 | 766 | 23 | 0 | 1 | 766 | 1 | 766 | 0.0e+00 | 1165.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73925 | MS.gene030926 | PPI |
| MS.gene030926 | MS.gene037992 | PPI |
| MS.gene94097 | MS.gene030926 | PPI |
| MS.gene030926 | MS.gene24055 | PPI |
| MS.gene030926 | MS.gene053746 | PPI |
| MS.gene036000 | MS.gene030926 | PPI |
| MS.gene030926 | MS.gene058993 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030926.t1 | MTR_8g088930 | 96.606 | 766 | 26 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1539 |
| MS.gene030926.t1 | MTR_8g088930 | 96.480 | 767 | 26 | 1 | 1 | 766 | 1 | 767 | 0.0 | 1534 |
| MS.gene030926.t1 | MTR_8g088930 | 96.582 | 673 | 23 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1353 |
| MS.gene030926.t1 | MTR_8g088930 | 96.439 | 674 | 23 | 1 | 1 | 673 | 1 | 674 | 0.0 | 1348 |
| MS.gene030926.t1 | MTR_1g062740 | 50.769 | 780 | 355 | 6 | 6 | 763 | 44 | 816 | 0.0 | 763 |
| MS.gene030926.t1 | MTR_1g050740 | 39.012 | 769 | 401 | 13 | 9 | 759 | 57 | 775 | 0.0 | 543 |
| MS.gene030926.t1 | MTR_1g050740 | 37.815 | 119 | 74 | 0 | 76 | 194 | 55 | 173 | 4.15e-18 | 89.7 |
| MS.gene030926.t1 | MTR_3g073100 | 38.333 | 780 | 371 | 17 | 1 | 764 | 45 | 730 | 1.83e-170 | 508 |
| MS.gene030926.t1 | MTR_7g089950 | 39.142 | 769 | 399 | 16 | 8 | 757 | 66 | 784 | 3.87e-169 | 507 |
| MS.gene030926.t1 | MTR_3g097260 | 38.592 | 767 | 346 | 14 | 9 | 764 | 51 | 703 | 3.69e-163 | 489 |
| MS.gene030926.t1 | MTR_3g097260 | 40.000 | 85 | 51 | 0 | 7 | 91 | 141 | 225 | 1.19e-12 | 72.0 |
| MS.gene030926.t1 | MTR_3g014650 | 37.468 | 774 | 367 | 20 | 9 | 757 | 85 | 766 | 1.14e-147 | 451 |
| MS.gene030926.t1 | MTR_5g459450 | 46.651 | 433 | 181 | 9 | 341 | 759 | 331 | 727 | 1.03e-119 | 378 |
| MS.gene030926.t1 | MTR_5g459450 | 46.429 | 168 | 90 | 0 | 9 | 176 | 65 | 232 | 1.10e-47 | 181 |
| MS.gene030926.t1 | MTR_5g459450 | 35.135 | 148 | 94 | 1 | 47 | 194 | 59 | 204 | 9.90e-22 | 101 |
| MS.gene030926.t1 | MTR_8g095170 | 44.118 | 442 | 190 | 8 | 327 | 764 | 277 | 665 | 2.82e-116 | 366 |
| MS.gene030926.t1 | MTR_8g095170 | 44.970 | 169 | 92 | 1 | 6 | 173 | 23 | 191 | 8.20e-43 | 166 |
| MS.gene030926.t1 | MTR_8g095170 | 38.519 | 135 | 82 | 1 | 59 | 192 | 30 | 164 | 3.37e-19 | 92.8 |
| MS.gene030926.t1 | MTR_8g039100 | 43.953 | 430 | 196 | 7 | 341 | 764 | 359 | 749 | 2.27e-105 | 340 |
| MS.gene030926.t1 | MTR_8g039100 | 47.090 | 189 | 100 | 0 | 9 | 197 | 49 | 237 | 5.99e-56 | 205 |
| MS.gene030926.t1 | MTR_8g095170 | 53.357 | 283 | 128 | 3 | 327 | 607 | 277 | 557 | 3.14e-96 | 311 |
| MS.gene030926.t1 | MTR_8g095170 | 44.970 | 169 | 92 | 1 | 6 | 173 | 23 | 191 | 7.87e-43 | 164 |
| MS.gene030926.t1 | MTR_8g095170 | 38.519 | 135 | 82 | 1 | 59 | 192 | 30 | 164 | 5.37e-19 | 92.0 |
| MS.gene030926.t1 | MTR_8g080860 | 53.646 | 192 | 89 | 0 | 1 | 192 | 8 | 199 | 7.57e-62 | 209 |
| MS.gene030926.t1 | MTR_8g080860 | 40.252 | 159 | 95 | 0 | 12 | 170 | 111 | 269 | 5.04e-30 | 120 |
| MS.gene030926.t1 | MTR_8g080860 | 53.646 | 192 | 89 | 0 | 1 | 192 | 4 | 195 | 1.13e-61 | 209 |
| MS.gene030926.t1 | MTR_8g080860 | 40.252 | 159 | 95 | 0 | 12 | 170 | 107 | 265 | 7.50e-30 | 120 |
| MS.gene030926.t1 | MTR_4g107460 | 53.191 | 188 | 87 | 1 | 7 | 193 | 3 | 190 | 9.60e-56 | 195 |
| MS.gene030926.t1 | MTR_4g107460 | 37.241 | 145 | 91 | 0 | 15 | 159 | 104 | 248 | 2.42e-20 | 93.6 |
| MS.gene030926.t1 | MTR_8g080350 | 41.509 | 265 | 111 | 5 | 12 | 236 | 125 | 385 | 2.25e-51 | 184 |
| MS.gene030926.t1 | MTR_8g095240 | 34.000 | 350 | 201 | 5 | 10 | 334 | 70 | 414 | 3.26e-46 | 171 |
| MS.gene030926.t1 | MTR_8g095240 | 42.396 | 217 | 91 | 2 | 12 | 194 | 3 | 219 | 1.55e-40 | 154 |
| MS.gene030926.t1 | MTR_8g092090 | 46.237 | 186 | 85 | 1 | 7 | 192 | 3 | 173 | 1.97e-42 | 155 |
| MS.gene030926.t1 | MTR_8g092090 | 36.913 | 149 | 94 | 0 | 11 | 159 | 84 | 232 | 8.94e-22 | 95.9 |
| MS.gene030926.t1 | MTR_8g092090 | 39.259 | 135 | 51 | 1 | 98 | 201 | 2 | 136 | 2.22e-16 | 80.1 |
| MS.gene030926.t1 | MTR_6g043150 | 44.560 | 193 | 106 | 1 | 6 | 197 | 3 | 195 | 5.58e-41 | 153 |
| MS.gene030926.t1 | MTR_6g043150 | 44.920 | 187 | 102 | 1 | 13 | 198 | 79 | 265 | 8.19e-38 | 144 |
| MS.gene030926.t1 | MTR_6g043150 | 43.017 | 179 | 102 | 0 | 13 | 191 | 148 | 326 | 3.16e-32 | 128 |
| MS.gene030926.t1 | MTR_8g080340 | 44.706 | 170 | 70 | 2 | 1 | 170 | 8 | 153 | 2.65e-39 | 143 |
| MS.gene030926.t1 | MTR_8g080340 | 52.252 | 111 | 52 | 1 | 82 | 192 | 20 | 129 | 1.27e-28 | 113 |
| MS.gene030926.t1 | MTR_8g092410 | 32.884 | 371 | 178 | 11 | 13 | 337 | 28 | 373 | 1.35e-37 | 145 |
| MS.gene030926.t1 | MTR_2g078470 | 43.085 | 188 | 106 | 1 | 13 | 199 | 79 | 266 | 1.88e-37 | 144 |
| MS.gene030926.t1 | MTR_2g078470 | 39.167 | 240 | 99 | 2 | 6 | 198 | 3 | 242 | 3.15e-36 | 141 |
| MS.gene030926.t1 | MTR_2g078470 | 46.575 | 146 | 78 | 0 | 11 | 156 | 215 | 360 | 3.76e-34 | 135 |
| MS.gene030926.t1 | MTR_2g078470 | 40.426 | 188 | 111 | 1 | 13 | 199 | 148 | 335 | 4.68e-34 | 134 |
| MS.gene030926.t1 | MTR_2g078470 | 58.427 | 89 | 37 | 0 | 13 | 101 | 286 | 374 | 1.00e-24 | 107 |
| MS.gene030926.t1 | MTR_5g010840 | 39.189 | 222 | 97 | 2 | 14 | 197 | 113 | 334 | 3.99e-37 | 144 |
| MS.gene030926.t1 | MTR_5g010840 | 40.761 | 184 | 94 | 1 | 13 | 181 | 181 | 364 | 4.37e-34 | 135 |
| MS.gene030926.t1 | MTR_5g010840 | 31.724 | 145 | 90 | 2 | 56 | 199 | 109 | 245 | 1.06e-13 | 73.9 |
| MS.gene030926.t1 | MTR_5g010840 | 34.677 | 124 | 58 | 1 | 12 | 112 | 241 | 364 | 1.77e-11 | 67.4 |
| MS.gene030926.t1 | MTR_8g080310 | 45.455 | 143 | 78 | 0 | 50 | 192 | 1 | 143 | 3.73e-31 | 119 |
| MS.gene030926.t1 | MTR_8g080310 | 39.869 | 153 | 92 | 0 | 8 | 160 | 5 | 157 | 9.83e-28 | 110 |
| MS.gene030926.t1 | MTR_7g451440 | 36.170 | 188 | 117 | 1 | 12 | 196 | 191 | 378 | 1.34e-30 | 126 |
| MS.gene030926.t1 | MTR_7g451440 | 34.266 | 143 | 91 | 1 | 4 | 143 | 226 | 368 | 7.01e-19 | 90.9 |
| MS.gene030926.t1 | MTR_7g451440 | 41.304 | 92 | 54 | 0 | 102 | 193 | 189 | 280 | 2.60e-14 | 76.6 |
| MS.gene030926.t1 | MTR_7g451440 | 25.000 | 228 | 146 | 3 | 51 | 253 | 184 | 411 | 3.54e-14 | 76.3 |
| MS.gene030926.t1 | MTR_3g072650 | 34.857 | 175 | 114 | 0 | 12 | 186 | 184 | 358 | 9.39e-29 | 120 |
| MS.gene030926.t1 | MTR_3g072650 | 35.965 | 114 | 73 | 0 | 82 | 195 | 185 | 298 | 1.75e-12 | 70.5 |
| MS.gene030926.t1 | MTR_3g072650 | 39.785 | 93 | 56 | 0 | 100 | 192 | 180 | 272 | 4.27e-12 | 69.3 |
| MS.gene030926.t1 | MTR_3g072650 | 34.857 | 175 | 114 | 0 | 12 | 186 | 184 | 358 | 1.15e-28 | 119 |
| MS.gene030926.t1 | MTR_3g072650 | 35.965 | 114 | 73 | 0 | 82 | 195 | 185 | 298 | 2.00e-12 | 70.1 |
| MS.gene030926.t1 | MTR_3g072650 | 39.785 | 93 | 56 | 0 | 100 | 192 | 180 | 272 | 4.97e-12 | 68.9 |
| MS.gene030926.t1 | MTR_4g099180 | 35.955 | 178 | 114 | 0 | 12 | 189 | 171 | 348 | 1.38e-28 | 119 |
| MS.gene030926.t1 | MTR_4g099180 | 35.036 | 137 | 89 | 0 | 7 | 143 | 212 | 348 | 1.37e-18 | 89.4 |
| MS.gene030926.t1 | MTR_4g099180 | 39.474 | 114 | 69 | 0 | 82 | 195 | 172 | 285 | 5.85e-14 | 75.1 |
| MS.gene030926.t1 | MTR_5g058920 | 36.313 | 179 | 114 | 0 | 8 | 186 | 192 | 370 | 4.97e-28 | 118 |
| MS.gene030926.t1 | MTR_5g058920 | 36.090 | 133 | 85 | 0 | 10 | 142 | 240 | 372 | 1.00e-16 | 84.0 |
| MS.gene030926.t1 | MTR_5g058920 | 37.719 | 114 | 71 | 0 | 82 | 195 | 197 | 310 | 1.40e-12 | 70.9 |
| MS.gene030926.t1 | MTR_8g007500 | 33.146 | 178 | 119 | 0 | 12 | 189 | 196 | 373 | 8.33e-25 | 108 |
| MS.gene030926.t1 | MTR_8g007500 | 34.307 | 137 | 90 | 0 | 7 | 143 | 237 | 373 | 3.50e-18 | 88.6 |
| MS.gene030926.t1 | MTR_8g007500 | 43.478 | 92 | 52 | 0 | 102 | 193 | 194 | 285 | 1.04e-14 | 77.8 |
| MS.gene030926.t1 | MTR_3g023310 | 41.353 | 133 | 65 | 1 | 24 | 156 | 7 | 126 | 1.18e-22 | 96.3 |
| MS.gene030926.t1 | MTR_3g023310 | 40.650 | 123 | 60 | 2 | 70 | 192 | 7 | 116 | 1.01e-17 | 82.0 |
| MS.gene030926.t1 | MTR_3g005910 | 55.556 | 72 | 32 | 0 | 455 | 526 | 1 | 72 | 8.75e-21 | 87.4 |
| MS.gene030926.t1 | MTR_4g099180 | 36.842 | 114 | 72 | 0 | 12 | 125 | 171 | 284 | 1.56e-15 | 78.6 |
| MS.gene030926.t1 | MTR_4g099180 | 39.474 | 114 | 69 | 0 | 82 | 195 | 172 | 285 | 1.17e-14 | 76.3 |
| MS.gene030926.t1 | MTR_3g023315 | 76.744 | 43 | 10 | 0 | 17 | 59 | 12 | 54 | 2.25e-15 | 72.0 |
| MS.gene030926.t1 | MTR_4g099180 | 36.842 | 114 | 72 | 0 | 12 | 125 | 171 | 284 | 3.20e-15 | 78.2 |
| MS.gene030926.t1 | MTR_4g099180 | 39.474 | 114 | 69 | 0 | 82 | 195 | 172 | 285 | 2.50e-14 | 75.5 |
| MS.gene030926.t1 | MTR_4g124590 | 31.217 | 189 | 110 | 7 | 437 | 611 | 1550 | 1732 | 1.39e-14 | 78.6 |
| MS.gene030926.t1 | MTR_8g023080 | 30.688 | 189 | 111 | 7 | 437 | 611 | 1558 | 1740 | 2.05e-13 | 75.1 |
| MS.gene030926.t1 | MTR_8g023080 | 30.688 | 189 | 111 | 7 | 437 | 611 | 1550 | 1732 | 2.12e-13 | 74.7 |
| MS.gene030926.t1 | MTR_1g112280 | 29.134 | 127 | 90 | 0 | 61 | 187 | 615 | 741 | 8.22e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030926.t1 | AT1G10900 | 63.900 | 759 | 264 | 5 | 6 | 764 | 4 | 752 | 0.0 | 986 |
| MS.gene030926.t1 | AT1G10900 | 63.900 | 759 | 264 | 5 | 6 | 764 | 4 | 752 | 0.0 | 986 |
| MS.gene030926.t1 | AT1G10900 | 63.900 | 759 | 264 | 5 | 6 | 764 | 4 | 752 | 0.0 | 986 |
| MS.gene030926.t1 | AT1G60890 | 61.806 | 775 | 269 | 7 | 6 | 764 | 4 | 767 | 0.0 | 969 |
| MS.gene030926.t1 | AT1G60890 | 61.917 | 772 | 267 | 7 | 9 | 764 | 19 | 779 | 0.0 | 966 |
| MS.gene030926.t1 | AT3G09920 | 49.871 | 774 | 365 | 12 | 6 | 764 | 46 | 811 | 0.0 | 740 |
| MS.gene030926.t1 | AT3G09920 | 49.871 | 774 | 365 | 12 | 6 | 764 | 46 | 811 | 0.0 | 740 |
| MS.gene030926.t1 | AT3G09920 | 49.871 | 774 | 365 | 12 | 6 | 764 | 46 | 811 | 0.0 | 740 |
| MS.gene030926.t1 | AT3G09920 | 49.871 | 774 | 365 | 12 | 6 | 764 | 46 | 811 | 0.0 | 740 |
| MS.gene030926.t1 | AT3G07960 | 39.897 | 777 | 360 | 14 | 9 | 764 | 23 | 713 | 0.0 | 558 |
| MS.gene030926.t1 | AT3G07960 | 37.815 | 119 | 74 | 0 | 76 | 194 | 21 | 139 | 1.34e-19 | 94.4 |
| MS.gene030926.t1 | AT2G41210 | 40.838 | 764 | 376 | 16 | 9 | 759 | 66 | 766 | 0.0 | 555 |
| MS.gene030926.t1 | AT3G56960 | 39.948 | 771 | 387 | 17 | 9 | 764 | 68 | 777 | 0.0 | 544 |
| MS.gene030926.t1 | AT3G56960 | 39.948 | 771 | 387 | 17 | 9 | 764 | 68 | 777 | 0.0 | 544 |
| MS.gene030926.t1 | AT3G07960 | 42.500 | 600 | 287 | 8 | 9 | 591 | 23 | 581 | 2.44e-164 | 489 |
| MS.gene030926.t1 | AT3G07960 | 37.815 | 119 | 74 | 0 | 76 | 194 | 21 | 139 | 2.62e-19 | 93.2 |
| MS.gene030926.t1 | AT3G07960 | 42.500 | 600 | 287 | 8 | 9 | 591 | 23 | 581 | 3.35e-164 | 488 |
| MS.gene030926.t1 | AT3G07960 | 37.815 | 119 | 74 | 0 | 76 | 194 | 21 | 139 | 3.11e-19 | 92.8 |
| MS.gene030926.t1 | AT3G07960 | 42.500 | 600 | 287 | 8 | 9 | 591 | 23 | 581 | 3.35e-164 | 488 |
| MS.gene030926.t1 | AT3G07960 | 37.815 | 119 | 74 | 0 | 76 | 194 | 21 | 139 | 3.11e-19 | 92.8 |
| MS.gene030926.t1 | AT1G21980 | 37.602 | 734 | 372 | 17 | 59 | 764 | 76 | 751 | 5.44e-149 | 454 |
| MS.gene030926.t1 | AT1G21980 | 47.458 | 177 | 93 | 0 | 9 | 185 | 72 | 248 | 2.14e-52 | 195 |
| MS.gene030926.t1 | AT2G26420 | 36.601 | 765 | 377 | 16 | 6 | 759 | 46 | 713 | 1.35e-147 | 449 |
| MS.gene030926.t1 | AT2G26420 | 36.601 | 765 | 377 | 16 | 6 | 759 | 46 | 713 | 1.35e-147 | 449 |
| MS.gene030926.t1 | AT2G26420 | 36.640 | 756 | 375 | 15 | 6 | 759 | 46 | 699 | 4.92e-144 | 439 |
| MS.gene030926.t1 | AT1G77740 | 46.528 | 432 | 180 | 8 | 341 | 759 | 355 | 748 | 8.54e-121 | 380 |
| MS.gene030926.t1 | AT1G77740 | 45.763 | 177 | 96 | 0 | 9 | 185 | 73 | 249 | 5.81e-50 | 188 |
| MS.gene030926.t1 | AT1G77740 | 36.364 | 88 | 56 | 0 | 9 | 96 | 165 | 252 | 2.48e-14 | 77.4 |
| MS.gene030926.t1 | AT1G77740 | 33.621 | 116 | 54 | 1 | 102 | 194 | 74 | 189 | 3.98e-14 | 76.6 |
| MS.gene030926.t1 | AT1G77740 | 46.528 | 432 | 180 | 8 | 341 | 759 | 355 | 748 | 8.54e-121 | 380 |
| MS.gene030926.t1 | AT1G77740 | 45.763 | 177 | 96 | 0 | 9 | 185 | 73 | 249 | 5.81e-50 | 188 |
| MS.gene030926.t1 | AT1G77740 | 36.364 | 88 | 56 | 0 | 9 | 96 | 165 | 252 | 2.48e-14 | 77.4 |
| MS.gene030926.t1 | AT1G77740 | 33.621 | 116 | 54 | 1 | 102 | 194 | 74 | 189 | 3.98e-14 | 76.6 |
| MS.gene030926.t1 | AT1G01460 | 34.180 | 433 | 239 | 10 | 365 | 764 | 3 | 422 | 3.36e-74 | 248 |
| MS.gene030926.t1 | AT4G01190 | 34.063 | 411 | 245 | 9 | 363 | 763 | 8 | 402 | 1.83e-69 | 234 |
| MS.gene030926.t1 | AT4G01190 | 34.063 | 411 | 245 | 9 | 363 | 763 | 8 | 402 | 1.83e-69 | 234 |
| MS.gene030926.t1 | AT4G01190 | 34.596 | 396 | 236 | 8 | 378 | 763 | 10 | 392 | 2.66e-69 | 233 |
| MS.gene030926.t1 | AT4G17080 | 34.595 | 185 | 120 | 1 | 3 | 187 | 248 | 431 | 1.48e-28 | 121 |
| MS.gene030926.t1 | AT4G17080 | 35.000 | 160 | 104 | 0 | 35 | 194 | 256 | 415 | 5.69e-22 | 100 |
| MS.gene030926.t1 | AT4G17080 | 32.836 | 134 | 90 | 0 | 10 | 143 | 300 | 433 | 4.39e-18 | 88.6 |
| MS.gene030926.t1 | AT4G17080 | 28.054 | 221 | 157 | 1 | 56 | 276 | 233 | 451 | 1.99e-15 | 80.5 |
| MS.gene030926.t1 | AT1G77660 | 35.429 | 175 | 113 | 0 | 12 | 186 | 177 | 351 | 7.80e-28 | 117 |
| MS.gene030926.t1 | AT1G77660 | 33.099 | 142 | 92 | 1 | 4 | 142 | 212 | 353 | 4.51e-16 | 81.6 |
| MS.gene030926.t1 | AT1G77660 | 35.088 | 114 | 74 | 0 | 82 | 195 | 178 | 291 | 2.24e-11 | 67.0 |
| MS.gene030926.t1 | AT2G35170 | 35.135 | 185 | 119 | 1 | 3 | 187 | 217 | 400 | 2.70e-27 | 117 |
| MS.gene030926.t1 | AT2G35170 | 26.667 | 225 | 156 | 2 | 56 | 276 | 201 | 420 | 4.85e-13 | 72.8 |
| MS.gene030926.t1 | AT1G21920 | 34.091 | 176 | 116 | 0 | 12 | 187 | 173 | 348 | 1.65e-26 | 113 |
| MS.gene030926.t1 | AT1G21920 | 32.824 | 131 | 88 | 0 | 10 | 140 | 217 | 347 | 1.02e-14 | 77.4 |
| MS.gene030926.t1 | AT1G21920 | 35.965 | 114 | 73 | 0 | 82 | 195 | 174 | 287 | 8.65e-12 | 68.6 |
| MS.gene030926.t1 | AT1G21920 | 34.091 | 176 | 116 | 0 | 12 | 187 | 173 | 348 | 1.98e-26 | 112 |
| MS.gene030926.t1 | AT1G21920 | 32.824 | 131 | 88 | 0 | 10 | 140 | 217 | 347 | 1.26e-14 | 76.6 |
| MS.gene030926.t1 | AT1G21920 | 35.965 | 114 | 73 | 0 | 82 | 195 | 174 | 287 | 9.01e-12 | 68.2 |
| MS.gene030926.t1 | AT1G34260 | 30.189 | 212 | 125 | 9 | 392 | 588 | 1180 | 1383 | 5.74e-17 | 86.7 |
| MS.gene030926.t1 | AT1G34260 | 30.189 | 212 | 125 | 9 | 392 | 588 | 1180 | 1383 | 5.74e-17 | 86.7 |
| MS.gene030926.t1 | AT1G34260 | 30.189 | 212 | 125 | 9 | 392 | 588 | 1180 | 1383 | 5.74e-17 | 86.7 |
| MS.gene030926.t1 | AT1G34260 | 30.189 | 212 | 125 | 9 | 392 | 588 | 940 | 1143 | 7.00e-17 | 86.3 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1440 | 1653 | 2.71e-15 | 81.3 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1444 | 1657 | 2.86e-15 | 80.9 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1444 | 1657 | 2.86e-15 | 80.9 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1444 | 1657 | 2.86e-15 | 80.9 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1443 | 1656 | 2.88e-15 | 80.9 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1404 | 1617 | 2.92e-15 | 80.9 |
| MS.gene030926.t1 | AT4G33240 | 31.390 | 223 | 130 | 9 | 380 | 588 | 1441 | 1654 | 3.03e-15 | 80.9 |
| MS.gene030926.t1 | AT1G71010 | 32.727 | 165 | 97 | 5 | 437 | 588 | 1414 | 1577 | 1.26e-13 | 75.5 |
| MS.gene030926.t1 | AT1G75010 | 30.709 | 127 | 88 | 0 | 61 | 187 | 604 | 730 | 2.05e-12 | 71.2 |
| MS.gene030926.t1 | AT1G75010 | 39.080 | 87 | 53 | 0 | 109 | 195 | 606 | 692 | 9.29e-11 | 65.9 |
Find 171 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACGGTTTAATCTTGAATT+TGG | 0.151222 | 4.3:+11309354 | None:intergenic |
| CAGATGTTTACGAAGGTTTA+TGG | 0.157602 | 4.3:-11309692 | MS.gene030926:CDS |
| CCTACATGATGGTAGTATTT+AGG | 0.206353 | 4.3:+11308167 | None:intergenic |
| CATCAATTTCATGGATAAAA+AGG | 0.210898 | 4.3:-11305894 | MS.gene030926:CDS |
| TTCTCTAGACTGCAAGTTCT+TGG | 0.217156 | 4.3:-11306712 | MS.gene030926:CDS |
| TACAGACATCACGGTATTTC+CGG | 0.243562 | 4.3:+11305866 | None:intergenic |
| TTTGATGGTTGTTGGTTAAA+TGG | 0.249491 | 4.3:-11309546 | MS.gene030926:CDS |
| TTTGAGAGAAATGTTCAAAT+TGG | 0.275332 | 4.3:-11308480 | MS.gene030926:CDS |
| GAAGTTCGGTCGTCTGATTT+TGG | 0.281272 | 4.3:-11308749 | MS.gene030926:CDS |
| TCAGATGGAGGACTTTATAT+TGG | 0.295938 | 4.3:-11309492 | MS.gene030926:CDS |
| GAAGTATCTATATTGGAAAT+TGG | 0.296465 | 4.3:-11309623 | MS.gene030926:CDS |
| AACACTGAGAGGTGGGAAAA+AGG | 0.313597 | 4.3:-11308096 | MS.gene030926:intron |
| ACTCTTATTACAAAATTCTT+CGG | 0.317002 | 4.3:-11308131 | MS.gene030926:CDS |
| TGAACGTTTCATCAATTTCA+TGG | 0.329150 | 4.3:-11305903 | MS.gene030926:CDS |
| GTAAAGAAGAGTTCAATTAT+AGG | 0.329256 | 4.3:-11309030 | MS.gene030926:CDS |
| TATGAAGGGGATTGGATAGA+TGG | 0.337976 | 4.3:-11309891 | MS.gene030926:CDS |
| GGTATCTGGTATGGGTAATA+TGG | 0.339467 | 4.3:-11309163 | MS.gene030926:CDS |
| CTCTTATTACAAAATTCTTC+GGG | 0.342573 | 4.3:-11308130 | MS.gene030926:CDS |
| ATCTCAAAGTACTTCATTGT+TGG | 0.345418 | 4.3:-11309280 | MS.gene030926:CDS |
| ATTATTGCCCTATGGTCTTC+AGG | 0.349462 | 4.3:-11308640 | MS.gene030926:intron |
| AATGATGGAAGTATCTATAT+TGG | 0.350708 | 4.3:-11309630 | MS.gene030926:CDS |
| CTCAGATTGCCGGTGCAATT+AGG | 0.361997 | 4.3:-11306139 | MS.gene030926:intron |
| AAAGGAACATTCTATCCTTC+TGG | 0.363846 | 4.3:-11309441 | MS.gene030926:CDS |
| CTCAGATTGACCTTCATTAG+AGG | 0.364250 | 4.3:+11309185 | None:intergenic |
| TCTGTTACTGATATAGTAAT+AGG | 0.382827 | 4.3:+11305941 | None:intergenic |
| AAGTACGAGGGTGAATTCTC+AGG | 0.394106 | 4.3:-11309825 | MS.gene030926:CDS |
| ACCTTCGTAAACATCTGAAT+TGG | 0.404965 | 4.3:+11309698 | None:intergenic |
| TTGGAGAAAGAGCTAGGATA+AGG | 0.407652 | 4.3:-11308730 | MS.gene030926:CDS |
| ACGAACGCCTTTAGATTCTC+TGG | 0.408227 | 4.3:+11306636 | None:intergenic |
| GAAGGTCAATCTGAGGTATC+TGG | 0.410812 | 4.3:-11309177 | MS.gene030926:CDS |
| CAGGGAAAGGGATACTTATA+TGG | 0.412305 | 4.3:-11309860 | MS.gene030926:CDS |
| ACAGACATCACGGTATTTCC+GGG | 0.414756 | 4.3:+11305867 | None:intergenic |
| GGGAATAATAGATATACTTC+AGG | 0.414956 | 4.3:-11306017 | MS.gene030926:CDS |
| ACGCCTGGACCTCACATTAG+AGG | 0.416249 | 4.3:-11306353 | MS.gene030926:CDS |
| CGGTTCCTGCACGCGAAGTT+CGG | 0.417255 | 4.3:-11308763 | MS.gene030926:CDS |
| AGCTTCGTCAACGCGACGCC+TGG | 0.420191 | 4.3:-11306368 | MS.gene030926:CDS |
| TCTAAAATACGAATTTCATA+TGG | 0.420253 | 4.3:-11307857 | MS.gene030926:CDS |
| AACAACCATCTCTAAAGAAA+TGG | 0.425820 | 4.3:-11309413 | MS.gene030926:CDS |
| ATGAATGTTCCTCAGATTGC+CGG | 0.428484 | 4.3:-11306149 | MS.gene030926:intron |
| TTAATTTGCAGCTTGGCATC+AGG | 0.428757 | 4.3:-11308972 | MS.gene030926:intron |
| TTAGGTGCGGTTTGTTGTCA+TGG | 0.434098 | 4.3:-11307998 | MS.gene030926:intron |
| GATCGGTATATGAAGGGGAT+TGG | 0.434561 | 4.3:-11309899 | MS.gene030926:CDS |
| GGGATTATGAAGTGGTTTAA+CGG | 0.437434 | 4.3:-11309576 | MS.gene030926:CDS |
| TACGAAGGTTTATGGAAAGA+AGG | 0.438135 | 4.3:-11309684 | MS.gene030926:CDS |
| GAAGAGAAGTCCTTTACAAA+TGG | 0.438715 | 4.3:-11309990 | MS.gene030926:CDS |
| TCAATCTGAGGTATCTGGTA+TGG | 0.440557 | 4.3:-11309172 | MS.gene030926:CDS |
| AATTGATTACAGTCTTCTGT+TGG | 0.443015 | 4.3:-11306676 | MS.gene030926:CDS |
| CCCTCGTACTTTGCTCCTGA+TGG | 0.449131 | 4.3:+11309837 | None:intergenic |
| ACTGTTCTGTAGACTTCTAC+TGG | 0.449316 | 4.3:-11308667 | MS.gene030926:CDS |
| GGAAAATTTACTTGGAATGA+TGG | 0.451266 | 4.3:-11309645 | MS.gene030926:CDS |
| ATGAATGCTCATCACGGGAT+TGG | 0.454271 | 4.3:-11309735 | MS.gene030926:CDS |
| CGACATATGCAATCGTCAGC+AGG | 0.456001 | 4.3:+11309234 | None:intergenic |
| CGAACTTCGCGTGCAGGAAC+CGG | 0.457813 | 4.3:+11308764 | None:intergenic |
| GATAATAGCTTCGGCGGTGT+TGG | 0.458656 | 4.3:+11309001 | None:intergenic |
| AAGGCGTTCGTCGAACCTCC+TGG | 0.464255 | 4.3:-11306624 | MS.gene030926:CDS |
| ATCAAACTGCAGTGATTTGT+AGG | 0.464399 | 4.3:+11305964 | None:intergenic |
| GCAACTAACAACAAGCCTTT+CGG | 0.464606 | 4.3:+11306401 | None:intergenic |
| AAGGCAGCGGAAAATTTACT+TGG | 0.465244 | 4.3:-11309653 | MS.gene030926:CDS |
| CTGAAGCTTAATTTGCAGCT+TGG | 0.465574 | 4.3:-11308979 | MS.gene030926:CDS |
| ATTGATTACAGTCTTCTGTT+GGG | 0.467533 | 4.3:-11306675 | MS.gene030926:CDS |
| GGTATACTTCCCCACGGCAA+TGG | 0.471692 | 4.3:-11309942 | MS.gene030926:CDS |
| ATTCTCATCGCTATGAAGAT+TGG | 0.475717 | 4.3:+11309386 | None:intergenic |
| GGGATACTTATATGGCCATC+AGG | 0.475813 | 4.3:-11309852 | MS.gene030926:CDS |
| TAAGCTTCAGATAATAGCTT+CGG | 0.480311 | 4.3:+11308992 | None:intergenic |
| TAGAGCACAATCACCACAAA+TGG | 0.481172 | 4.3:+11308436 | None:intergenic |
| AAATACTCACCTTGCAGTAC+CGG | 0.481918 | 4.3:+11306277 | None:intergenic |
| TCATAGCGATGAGAATTGTA+AGG | 0.484127 | 4.3:-11309379 | MS.gene030926:CDS |
| TGTCTACATTGGTAAATTCA+AGG | 0.485501 | 4.3:-11309964 | MS.gene030926:CDS |
| GTATACTTCCCCACGGCAAT+GGG | 0.486894 | 4.3:-11309941 | MS.gene030926:CDS |
| CTGGAAAGATTATTGCCCTA+TGG | 0.492808 | 4.3:-11308648 | MS.gene030926:CDS |
| AATGGACTTAGACAAGGATC+TGG | 0.498528 | 4.3:-11309528 | MS.gene030926:CDS |
| CTAAAGGACATATCTTCAGC+TGG | 0.501585 | 4.3:-11308416 | MS.gene030926:CDS |
| CACCTCTCAGTGTTATTCGA+TGG | 0.502502 | 4.3:+11308105 | None:intergenic |
| TTTCATAACTTCCTACATGA+TGG | 0.502637 | 4.3:+11308156 | None:intergenic |
| TATATTGGAACATGGAGTAA+AGG | 0.502815 | 4.3:-11309477 | MS.gene030926:CDS |
| TTGTGGTGATTGTGCTCTAA+AGG | 0.503067 | 4.3:-11308432 | MS.gene030926:CDS |
| TTCTCAGGGAATTATCTTCA+CGG | 0.505250 | 4.3:-11309810 | MS.gene030926:CDS |
| TATAGTTTACCTTCTGCAGA+TGG | 0.505853 | 4.3:-11306585 | MS.gene030926:intron |
| TAGGTGCGGTTTGTTGTCAT+GGG | 0.512383 | 4.3:-11307997 | MS.gene030926:CDS |
| GAAGGAATTCGCGAAGGCAG+CGG | 0.514143 | 4.3:-11309666 | MS.gene030926:CDS |
| TTATGATGTGGTACTCTACA+TGG | 0.514200 | 4.3:-11306038 | MS.gene030926:CDS |
| GTACACCATTTCTTTAGAGA+TGG | 0.515782 | 4.3:+11309408 | None:intergenic |
| GGTCTGCGATAACGCGGATG+AGG | 0.519666 | 4.3:+11309206 | None:intergenic |
| CACTAGATTTACTCAAACAA+GGG | 0.520368 | 4.3:-11306439 | MS.gene030926:intron |
| GACGACCGAACTTCGCGTGC+AGG | 0.520685 | 4.3:+11308758 | None:intergenic |
| ATCAACTTCCTTGTTACCGA+TGG | 0.520731 | 4.3:+11306310 | None:intergenic |
| TTCCCTCTAATGTGAGGTCC+AGG | 0.521447 | 4.3:+11306350 | None:intergenic |
| GATAAGGATGTACTTTCCTA+AGG | 0.524503 | 4.3:-11308714 | MS.gene030926:CDS |
| AAAGGCCTAAAGGACGGAAA+AGG | 0.524731 | 4.3:-11309459 | MS.gene030926:CDS |
| GGCGTCGCGTTGACGAAGCT+CGG | 0.526121 | 4.3:+11306371 | None:intergenic |
| GTCAATTGTGAACCCTCCTT+AGG | 0.529080 | 4.3:+11308698 | None:intergenic |
| CGCCTGGACCTCACATTAGA+GGG | 0.534333 | 4.3:-11306352 | MS.gene030926:CDS |
| TACTGACGCTGTATTGCTCC+AGG | 0.536520 | 4.3:+11306606 | None:intergenic |
| AATGAATACCTGAAGACCAT+AGG | 0.538150 | 4.3:+11308632 | None:intergenic |
| TCAGATGGATCGGTATATGA+AGG | 0.538278 | 4.3:-11309906 | MS.gene030926:CDS |
| CAATCTGAGGTATCTGGTAT+GGG | 0.541389 | 4.3:-11309171 | MS.gene030926:CDS |
| TAGAGCTCCAGAGAATCTAA+AGG | 0.546858 | 4.3:-11306643 | MS.gene030926:CDS |
| TGTGTACTTCCCATTGCCGT+GGG | 0.548578 | 4.3:+11309932 | None:intergenic |
| CCTAAATACTACCATCATGT+AGG | 0.550012 | 4.3:-11308167 | MS.gene030926:CDS |
| GTCTACATTGGTAAATTCAA+GGG | 0.551103 | 4.3:-11309963 | MS.gene030926:CDS |
| AAGGATGTACTTTCCTAAGG+AGG | 0.552053 | 4.3:-11308711 | MS.gene030926:CDS |
| CCATCGTCGTTACGATCTGA+AGG | 0.555421 | 4.3:-11307947 | MS.gene030926:CDS |
| GGGAATTATCTTCACGGTCA+CGG | 0.556028 | 4.3:-11309804 | MS.gene030926:CDS |
| TGGAGGATGAATGCTCATCA+CGG | 0.558790 | 4.3:-11309741 | MS.gene030926:CDS |
| GTAGACATCACCATTTGTAA+AGG | 0.559629 | 4.3:+11309980 | None:intergenic |
| ATGTTTACTCCTAATTGCAC+CGG | 0.562596 | 4.3:+11306130 | None:intergenic |
| ATGTGTACTTCCCATTGCCG+TGG | 0.562750 | 4.3:+11309931 | None:intergenic |
| ACAAATGGTGATGTCTACAT+TGG | 0.565018 | 4.3:-11309975 | MS.gene030926:CDS |
| ATGAATACCTGAAGACCATA+GGG | 0.565904 | 4.3:+11308633 | None:intergenic |
| GGGAAGTACACATGGTCAGA+TGG | 0.568823 | 4.3:-11309921 | MS.gene030926:CDS |
| AGCATACTCCATCGGTAACA+AGG | 0.571690 | 4.3:-11306318 | MS.gene030926:CDS |
| GCACTAGATTTACTCAAACA+AGG | 0.574901 | 4.3:-11306440 | MS.gene030926:intron |
| GTACACATGGTCAGATGGAT+CGG | 0.577176 | 4.3:-11309916 | MS.gene030926:CDS |
| GATGGTTGTTTGCTACCAGA+AGG | 0.578528 | 4.3:+11309426 | None:intergenic |
| GGAGGATGAATGCTCATCAC+GGG | 0.578586 | 4.3:-11309740 | MS.gene030926:CDS |
| CAGATGGATCGGTATATGAA+GGG | 0.578591 | 4.3:-11309905 | MS.gene030926:CDS |
| TTATCGCAGACCTCTAATGA+AGG | 0.580718 | 4.3:-11309195 | MS.gene030926:CDS |
| AACATGGAGTAAAGGCCTAA+AGG | 0.583252 | 4.3:-11309469 | MS.gene030926:CDS |
| AAAAGGGAAAATAGATGGAA+GGG | 0.584921 | 4.3:-11309598 | MS.gene030926:CDS |
| CCTTCAGATCGTAACGACGA+TGG | 0.585986 | 4.3:+11307947 | None:intergenic |
| TTCGAAAGGGAATATATGCA+AGG | 0.587505 | 4.3:-11309138 | MS.gene030926:CDS |
| AATACTCACCTTGCAGTACC+GGG | 0.588020 | 4.3:+11306278 | None:intergenic |
| GATCTGAAGGGATCTTCTCA+AGG | 0.588048 | 4.3:-11307934 | MS.gene030926:CDS |
| AACGGCTGTGTTTACACAGG+TGG | 0.594060 | 4.3:-11309765 | MS.gene030926:CDS |
| TCCAATTCAGATGTTTACGA+AGG | 0.595150 | 4.3:-11309699 | MS.gene030926:CDS |
| AGTACGAGGGTGAATTCTCA+GGG | 0.595489 | 4.3:-11309824 | MS.gene030926:CDS |
| AAAGGGAAAATAGATGGAAG+GGG | 0.596052 | 4.3:-11309597 | MS.gene030926:CDS |
| AGGATGTACTTTCCTAAGGA+GGG | 0.596234 | 4.3:-11308710 | MS.gene030926:CDS |
| ATCGAATAACACTGAGAGGT+GGG | 0.596556 | 4.3:-11308103 | MS.gene030926:CDS |
| AGCAAACTAGTAGCTTGAGC+CGG | 0.603192 | 4.3:+11306106 | None:intergenic |
| GAGTACATGATGTCCATTTG+TGG | 0.605960 | 4.3:-11308449 | MS.gene030926:CDS |
| ATTAGAGGTCTGCGATAACG+CGG | 0.609836 | 4.3:+11309200 | None:intergenic |
| TGGTTAAATGGACTTAGACA+AGG | 0.611568 | 4.3:-11309534 | MS.gene030926:CDS |
| GACATATGCAATCGTCAGCA+GGG | 0.613342 | 4.3:+11309235 | None:intergenic |
| ACAAATGGACATCATGTACT+CGG | 0.617112 | 4.3:+11308451 | None:intergenic |
| CATCGAATAACACTGAGAGG+TGG | 0.622054 | 4.3:-11308104 | MS.gene030926:CDS |
| TAGTTTGCTTCAAGAAGACA+AGG | 0.625211 | 4.3:-11306092 | MS.gene030926:CDS |
| ATATACTAACCATCTGCAGA+AGG | 0.625385 | 4.3:+11306576 | None:intergenic |
| TAGTCATGGAGAACAATGGA+AGG | 0.628623 | 4.3:-11310147 | None:intergenic |
| GGCACATTCGCAAAATCGAA+CGG | 0.628854 | 4.3:-11309783 | MS.gene030926:CDS |
| TCAATTCTCAGGTACACTGT+AGG | 0.629207 | 4.3:-11308797 | MS.gene030926:intron |
| GCTTCAGATAATAGCTTCGG+CGG | 0.629314 | 4.3:+11308995 | None:intergenic |
| CTCTAATGAAGGTCAATCTG+AGG | 0.630043 | 4.3:-11309184 | MS.gene030926:CDS |
| GCTGTGTTTACACAGGTGGA+TGG | 0.631848 | 4.3:-11309761 | MS.gene030926:CDS |
| AAGGGAAAATAGATGGAAGG+GGG | 0.634233 | 4.3:-11309596 | MS.gene030926:CDS |
| TGGAGTAAAGGCCTAAAGGA+CGG | 0.638246 | 4.3:-11309465 | MS.gene030926:CDS |
| TGGAAAGAAGGAATTCGCGA+AGG | 0.641463 | 4.3:-11309672 | MS.gene030926:CDS |
| CTGTTAGTCATGGAGAACAA+TGG | 0.642887 | 4.3:-11310151 | None:intergenic |
| AATGTATTCCCTCTAATGTG+AGG | 0.644444 | 4.3:+11306344 | None:intergenic |
| AGATGGATCGGTATATGAAG+GGG | 0.644736 | 4.3:-11309904 | MS.gene030926:CDS |
| GAGGACTTTATATTGGAACA+TGG | 0.648337 | 4.3:-11309485 | MS.gene030926:CDS |
| GCCATCAGGAGCAAAGTACG+AGG | 0.650915 | 4.3:-11309838 | MS.gene030926:CDS |
| TATGATGTGGTACTCTACAT+GGG | 0.652027 | 4.3:-11306037 | MS.gene030926:CDS |
| GCAATTAGGAGTAAACATGC+CGG | 0.652141 | 4.3:-11306125 | MS.gene030926:CDS |
| ACTAGATTTACTCAAACAAG+GGG | 0.654789 | 4.3:-11306438 | MS.gene030926:intron |
| TATGCAAGGAGTTCTAATTG+TGG | 0.655152 | 4.3:-11309124 | MS.gene030926:CDS |
| AGAAATGTTCAAATTGGACG+CGG | 0.655936 | 4.3:-11308474 | MS.gene030926:CDS |
| GAGCAGTTGATCATTCCGAA+AGG | 0.659532 | 4.3:-11306416 | MS.gene030926:CDS |
| ACATTGAGAGCATACTCCAT+CGG | 0.662326 | 4.3:-11306326 | MS.gene030926:CDS |
| TTCAAGGGTATACTTCCCCA+CGG | 0.668280 | 4.3:-11309948 | MS.gene030926:CDS |
| ATCCATCGAATAACACTGAG+AGG | 0.670109 | 4.3:-11308107 | MS.gene030926:CDS |
| CATCGTCGTTACGATCTGAA+GGG | 0.676822 | 4.3:-11307946 | MS.gene030926:CDS |
| TTTGCTTCAAGAAGACAAGG+TGG | 0.679586 | 4.3:-11306089 | MS.gene030926:CDS |
| GTGTTTACACAGGTGGATGG+AGG | 0.686316 | 4.3:-11309758 | MS.gene030926:CDS |
| ACGGCAATGGGAAGTACACA+TGG | 0.686519 | 4.3:-11309929 | MS.gene030926:CDS |
| AAGTCTACAGAACAGTGTGG+AGG | 0.692411 | 4.3:+11308674 | None:intergenic |
| TAGAAGTCTACAGAACAGTG+TGG | 0.705962 | 4.3:+11308671 | None:intergenic |
| TCGAACGGCTGTGTTTACAC+AGG | 0.708881 | 4.3:-11309768 | MS.gene030926:CDS |
| CCATCAGGAGCAAAGTACGA+GGG | 0.713174 | 4.3:-11309837 | MS.gene030926:CDS |
| GTGTACTTCCCATTGCCGTG+GGG | 0.726031 | 4.3:+11309933 | None:intergenic |
| TGACGCTGTATTGCTCCAGG+AGG | 0.761183 | 4.3:+11306609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTAATTAAAAGTTAATA+TGG | + | chr4.3:11307731-11307750 | None:intergenic | 10.0% |
| !! | AATAAAAATATTTGTTTCAT+TGG | + | chr4.3:11308526-11308545 | None:intergenic | 10.0% |
| !!! | AATATCTTTTGTTTTATTTA+AGG | + | chr4.3:11308496-11308515 | None:intergenic | 10.0% |
| !!! | CTATATTTTATATGTAATAA+TGG | - | chr4.3:11308559-11308578 | MS.gene030926:intron | 10.0% |
| !! | AATAAAACAAAAGATATTAG+TGG | - | chr4.3:11308498-11308517 | MS.gene030926:intron | 15.0% |
| !! | ATATAAGTGTAAAGAAATAT+TGG | - | chr4.3:11308973-11308992 | MS.gene030926:CDS | 15.0% |
| !! | CACTTGAATATTTATTTATT+TGG | - | chr4.3:11307155-11307174 | MS.gene030926:intron | 15.0% |
| !! | TACTAACATAATCATTAAAT+AGG | + | chr4.3:11308315-11308334 | None:intergenic | 15.0% |
| !!! | AAAATCATCTGTTTAATTTT+CGG | + | chr4.3:11308948-11308967 | None:intergenic | 15.0% |
| !!! | AGTAATACAATTTTACTTTT+TGG | - | chr4.3:11308395-11308414 | MS.gene030926:CDS | 15.0% |
| !!! | ATATGATTTTATGATTATTG+TGG | - | chr4.3:11307440-11307459 | MS.gene030926:intron | 15.0% |
| !!! | TATTGCTATTAATTTTATCT+TGG | + | chr4.3:11308120-11308139 | None:intergenic | 15.0% |
| !! | AAAAGTTACTCTTATAAAGT+AGG | + | chr4.3:11308220-11308239 | None:intergenic | 20.0% |
| !! | ACTAAAAAAATATGAGCTAA+AGG | - | chr4.3:11307677-11307696 | MS.gene030926:intron | 20.0% |
| !! | ACTCTTATTACAAAATTCTT+CGG | - | chr4.3:11307885-11307904 | MS.gene030926:CDS | 20.0% |
| !! | ATATTGGAAATTGGAAAAAA+GGG | - | chr4.3:11306402-11306421 | MS.gene030926:CDS | 20.0% |
| !! | CAAAACAAAATACAAAACAA+AGG | + | chr4.3:11305934-11305953 | None:intergenic | 20.0% |
| !! | CATATCATATTCTAAATAAC+TGG | + | chr4.3:11309475-11309494 | None:intergenic | 20.0% |
| !! | GATATCAATATATAATCACT+AGG | + | chr4.3:11309515-11309534 | None:intergenic | 20.0% |
| !! | TATATTGGAAATTGGAAAAA+AGG | - | chr4.3:11306401-11306420 | MS.gene030926:CDS | 20.0% |
| !! | TATCAGAATAACATGTATAT+AGG | - | chr4.3:11307406-11307425 | MS.gene030926:intron | 20.0% |
| !!! | AGAAAACAACAAAGTATTTA+TGG | + | chr4.3:11307995-11308014 | None:intergenic | 20.0% |
| !!! | ATACAATTTTACTTTTTGGA+CGG | - | chr4.3:11308399-11308418 | MS.gene030926:CDS | 20.0% |
| !!! | TCTAAAATACGAATTTCATA+TGG | - | chr4.3:11308159-11308178 | MS.gene030926:CDS | 20.0% |
| ! | AAGAAGTAAAGACAGATATT+AGG | + | chr4.3:11307951-11307970 | None:intergenic | 25.0% |
| ! | AATATATAATCACTAGGCTT+GGG | + | chr4.3:11309509-11309528 | None:intergenic | 25.0% |
| ! | AATTAAGTACTTAAGAAGTC+AGG | + | chr4.3:11307785-11307804 | None:intergenic | 25.0% |
| ! | ATGTGATTTCATATATTTCC+AGG | - | chr4.3:11307511-11307530 | MS.gene030926:intron | 25.0% |
| ! | CATCAATTTCATGGATAAAA+AGG | - | chr4.3:11310122-11310141 | MS.gene030926:intron | 25.0% |
| ! | CTCTTATTACAAAATTCTTC+GGG | - | chr4.3:11307886-11307905 | MS.gene030926:CDS | 25.0% |
| ! | GTAAAGAAGAGTTCAATTAT+AGG | - | chr4.3:11306986-11307005 | MS.gene030926:intron | 25.0% |
| ! | TATGGTTAAACCAATTAACA+AGG | + | chr4.3:11307977-11307996 | None:intergenic | 25.0% |
| ! | TCTGTTACTGATATAGTAAT+AGG | + | chr4.3:11310078-11310097 | None:intergenic | 25.0% |
| ! | TTTGAGAGAAATGTTCAAAT+TGG | - | chr4.3:11307536-11307555 | MS.gene030926:intron | 25.0% |
| !! | AAACGTTCAGCATAAATTTT+AGG | + | chr4.3:11310102-11310121 | None:intergenic | 25.0% |
| !! | ACTATCAAAATCTGAAATTG+TGG | + | chr4.3:11309115-11309134 | None:intergenic | 25.0% |
| !! | GAAGTATCTATATTGGAAAT+TGG | - | chr4.3:11306393-11306412 | MS.gene030926:CDS | 25.0% |
| !! | TAACTGTTTCTTGTTAATGT+AGG | - | chr4.3:11306000-11306019 | MS.gene030926:CDS | 25.0% |
| !!! | AATGATGGAAGTATCTATAT+TGG | - | chr4.3:11306386-11306405 | MS.gene030926:CDS | 25.0% |
| !!! | ATTTTTTTTGCTCAATTCTC+AGG | - | chr4.3:11307208-11307227 | MS.gene030926:intron | 25.0% |
| !!! | GTTAGTATTTTATTTCCCAT+AGG | - | chr4.3:11308328-11308347 | MS.gene030926:intron | 25.0% |
| !!! | TTTCAGATTTTGATAGTACT+TGG | - | chr4.3:11309118-11309137 | MS.gene030926:CDS | 25.0% |
| AAAAAGGGAAAATAGATGGA+AGG | - | chr4.3:11306417-11306436 | MS.gene030926:CDS | 30.0% | |
| AAAAGGGAAAATAGATGGAA+GGG | - | chr4.3:11306418-11306437 | MS.gene030926:CDS | 30.0% | |
| AATTGATTACAGTCTTCTGT+TGG | - | chr4.3:11309340-11309359 | MS.gene030926:CDS | 30.0% | |
| ACTAGATTTACTCAAACAAG+GGG | - | chr4.3:11309578-11309597 | MS.gene030926:CDS | 30.0% | |
| ACTTCTTTCTCCTTGTTAAT+TGG | - | chr4.3:11307964-11307983 | MS.gene030926:CDS | 30.0% | |
| ATTGATTACAGTCTTCTGTT+GGG | - | chr4.3:11309341-11309360 | MS.gene030926:CDS | 30.0% | |
| ATTTGTGAGGGATAACAATA+AGG | + | chr4.3:11308662-11308681 | None:intergenic | 30.0% | |
| CAAAACAAAGGAGAATGAAT+AGG | + | chr4.3:11305922-11305941 | None:intergenic | 30.0% | |
| CAATATATAATCACTAGGCT+TGG | + | chr4.3:11309510-11309529 | None:intergenic | 30.0% | |
| CACTAGATTTACTCAAACAA+GGG | - | chr4.3:11309577-11309596 | MS.gene030926:CDS | 30.0% | |
| CTAATAATACTGGCACAATA+TGG | - | chr4.3:11308423-11308442 | MS.gene030926:CDS | 30.0% | |
| CTACGGTTTAATCTTGAATT+TGG | + | chr4.3:11306665-11306684 | None:intergenic | 30.0% | |
| GAACTTAAGATCACTAAACT+AGG | - | chr4.3:11309803-11309822 | MS.gene030926:CDS | 30.0% | |
| GGAAAATTTACTTGGAATGA+TGG | - | chr4.3:11306371-11306390 | MS.gene030926:CDS | 30.0% | |
| GGGAATAATAGATATACTTC+AGG | - | chr4.3:11309999-11310018 | MS.gene030926:intron | 30.0% | |
| GTCTACATTGGTAAATTCAA+GGG | - | chr4.3:11306053-11306072 | MS.gene030926:CDS | 30.0% | |
| TAAGCTTCAGATAATAGCTT+CGG | + | chr4.3:11307027-11307046 | None:intergenic | 30.0% | |
| TATATTGGAACATGGAGTAA+AGG | - | chr4.3:11306539-11306558 | MS.gene030926:intron | 30.0% | |
| TCTCTCTATTTGTAAAGCTT+TGG | + | chr4.3:11308813-11308832 | None:intergenic | 30.0% | |
| TGAACCAGAAAAATAAAGTC+AGG | + | chr4.3:11309277-11309296 | None:intergenic | 30.0% | |
| TGAACGTTTCATCAATTTCA+TGG | - | chr4.3:11310113-11310132 | MS.gene030926:intron | 30.0% | |
| TGGAAAAAAGGGAAAATAGA+TGG | - | chr4.3:11306413-11306432 | MS.gene030926:CDS | 30.0% | |
| TGTCTACATTGGTAAATTCA+AGG | - | chr4.3:11306052-11306071 | MS.gene030926:CDS | 30.0% | |
| TTTCATAACTTCCTACATGA+TGG | + | chr4.3:11307863-11307882 | None:intergenic | 30.0% | |
| ! | AACAACCATCTCTAAAGAAA+TGG | - | chr4.3:11306603-11306622 | MS.gene030926:CDS | 30.0% |
| ! | AAGTAGTAAAGCATTTCCTA+TGG | + | chr4.3:11308347-11308366 | None:intergenic | 30.0% |
| ! | AGTAGTAAAGCATTTCCTAT+GGG | + | chr4.3:11308346-11308365 | None:intergenic | 30.0% |
| ! | ATCTCAAAGTACTTCATTGT+TGG | - | chr4.3:11306736-11306755 | MS.gene030926:intron | 30.0% |
| ! | CTTTGTTATCGTAAGTACTA+TGG | - | chr4.3:11308364-11308383 | MS.gene030926:CDS | 30.0% |
| ! | GGAGTTTATAGATTTTCAGA+TGG | - | chr4.3:11306509-11306528 | MS.gene030926:intron | 30.0% |
| ! | GTTTATAGATTTTCAGATGG+AGG | - | chr4.3:11306512-11306531 | MS.gene030926:intron | 30.0% |
| ! | TTTGATGGTTGTTGGTTAAA+TGG | - | chr4.3:11306470-11306489 | MS.gene030926:intron | 30.0% |
| !!! | ACTTTGTTGTTTTCTTCGTT+AGG | - | chr4.3:11308000-11308019 | MS.gene030926:intron | 30.0% |
| !!! | ATGACCTGACTTTATTTTTC+TGG | - | chr4.3:11309270-11309289 | MS.gene030926:CDS | 30.0% |
| !!! | TGACTTTATTTTTCTGGTTC+AGG | - | chr4.3:11309276-11309295 | MS.gene030926:CDS | 30.0% |
| AAAGGAACATTCTATCCTTC+TGG | - | chr4.3:11306575-11306594 | MS.gene030926:intron | 35.0% | |
| AAAGGGAAAATAGATGGAAG+GGG | - | chr4.3:11306419-11306438 | MS.gene030926:CDS | 35.0% | |
| AATGAATACCTGAAGACCAT+AGG | + | chr4.3:11307387-11307406 | None:intergenic | 35.0% | |
| AATGTATTCCCTCTAATGTG+AGG | + | chr4.3:11309675-11309694 | None:intergenic | 35.0% | |
| AATTACTTTCCCTTCAGACA+AGG | + | chr4.3:11309233-11309252 | None:intergenic | 35.0% | |
| ACAAATGGACATCATGTACT+CGG | + | chr4.3:11307568-11307587 | None:intergenic | 35.0% | |
| ACCTATAACAAGAGGAATGT+AGG | + | chr4.3:11307813-11307832 | None:intergenic | 35.0% | |
| ACCTTCGTAAACATCTGAAT+TGG | + | chr4.3:11306321-11306340 | None:intergenic | 35.0% | |
| AGAAATGTTCAAATTGGACG+CGG | - | chr4.3:11307542-11307561 | MS.gene030926:intron | 35.0% | |
| AGGTATTTCGATTCATTGCT+GGG | + | chr4.3:11308642-11308661 | None:intergenic | 35.0% | |
| ATATACTAACCATCTGCAGA+AGG | + | chr4.3:11309443-11309462 | None:intergenic | 35.0% | |
| ATATCTTCAGCTGGAAAAAG+TGG | - | chr4.3:11307609-11307628 | MS.gene030926:intron | 35.0% | |
| ATCTCTTACTGACAGTATCA+TGG | - | chr4.3:11308897-11308916 | MS.gene030926:intron | 35.0% | |
| ATGAATACCTGAAGACCATA+GGG | + | chr4.3:11307386-11307405 | None:intergenic | 35.0% | |
| ATGGAAAAATGACAGGGAAA+GGG | - | chr4.3:11306144-11306163 | MS.gene030926:intron | 35.0% | |
| ATGTTTACTCCTAATTGCAC+CGG | + | chr4.3:11309889-11309908 | None:intergenic | 35.0% | |
| ATTCTCATCGCTATGAAGAT+TGG | + | chr4.3:11306633-11306652 | None:intergenic | 35.0% | |
| CACTGTAGGAAAAATTACAC+CGG | - | chr4.3:11307233-11307252 | MS.gene030926:intron | 35.0% | |
| CAGATGTTTACGAAGGTTTA+TGG | - | chr4.3:11306324-11306343 | MS.gene030926:CDS | 35.0% | |
| CCTAAATACTACCATCATGT+AGG | - | chr4.3:11307849-11307868 | MS.gene030926:CDS | 35.0% | |
| CCTACATGATGGTAGTATTT+AGG | + | chr4.3:11307852-11307871 | None:intergenic | 35.0% | |
| CTTTGTGCACTCATGAATAA+AGG | - | chr4.3:11308850-11308869 | MS.gene030926:intron | 35.0% | |
| GAACATTTCTCTCAAATTCC+TGG | + | chr4.3:11307532-11307551 | None:intergenic | 35.0% | |
| GAAGAGAAGTCCTTTACAAA+TGG | - | chr4.3:11306026-11306045 | MS.gene030926:CDS | 35.0% | |
| GACAGTATCATGGTAGTAAT+AGG | - | chr4.3:11308907-11308926 | MS.gene030926:intron | 35.0% | |
| GAGGACTTTATATTGGAACA+TGG | - | chr4.3:11306531-11306550 | MS.gene030926:intron | 35.0% | |
| GATAAGGATGTACTTTCCTA+AGG | - | chr4.3:11307302-11307321 | MS.gene030926:intron | 35.0% | |
| GCACTAGATTTACTCAAACA+AGG | - | chr4.3:11309576-11309595 | MS.gene030926:CDS | 35.0% | |
| GGATAGATGGAAAAATGACA+GGG | - | chr4.3:11306138-11306157 | MS.gene030926:intron | 35.0% | |
| GGGATTATGAAGTGGTTTAA+CGG | - | chr4.3:11306440-11306459 | MS.gene030926:intron | 35.0% | |
| GTAGACATCACCATTTGTAA+AGG | + | chr4.3:11306039-11306058 | None:intergenic | 35.0% | |
| TACGAAGGTTTATGGAAAGA+AGG | - | chr4.3:11306332-11306351 | MS.gene030926:CDS | 35.0% | |
| TATAGTTTACCTTCTGCAGA+TGG | - | chr4.3:11309431-11309450 | MS.gene030926:CDS | 35.0% | |
| TATGATGTGGTACTCTACAT+GGG | - | chr4.3:11309979-11309998 | MS.gene030926:CDS | 35.0% | |
| TCAGATGGAGGACTTTATAT+TGG | - | chr4.3:11306524-11306543 | MS.gene030926:intron | 35.0% | |
| TCATAGCGATGAGAATTGTA+AGG | - | chr4.3:11306637-11306656 | MS.gene030926:CDS | 35.0% | |
| TCCAATTCAGATGTTTACGA+AGG | - | chr4.3:11306317-11306336 | MS.gene030926:CDS | 35.0% | |
| TCGCTAAAATTTGCAATAGC+AGG | + | chr4.3:11309034-11309053 | None:intergenic | 35.0% | |
| TGAAGGGAAAGTAATTTACC+TGG | - | chr4.3:11309237-11309256 | MS.gene030926:CDS | 35.0% | |
| TGGATAGATGGAAAAATGAC+AGG | - | chr4.3:11306137-11306156 | MS.gene030926:CDS | 35.0% | |
| TTATCCCTCACAAATTGATG+CGG | - | chr4.3:11308667-11308686 | MS.gene030926:CDS | 35.0% | |
| TTATGATGTGGTACTCTACA+TGG | - | chr4.3:11309978-11309997 | MS.gene030926:CDS | 35.0% | |
| TTCGAAAGGGAATATATGCA+AGG | - | chr4.3:11306878-11306897 | MS.gene030926:intron | 35.0% | |
| TTCTAAATAACTGGCATCAG+AGG | + | chr4.3:11309466-11309485 | None:intergenic | 35.0% | |
| TTCTCAGGGAATTATCTTCA+CGG | - | chr4.3:11306206-11306225 | MS.gene030926:intron | 35.0% | |
| ! | AAGGTATTTCGATTCATTGC+TGG | + | chr4.3:11308643-11308662 | None:intergenic | 35.0% |
| ! | ACAAATGGTGATGTCTACAT+TGG | - | chr4.3:11306041-11306060 | MS.gene030926:CDS | 35.0% |
| ! | ATCAAACTGCAGTGATTTGT+AGG | + | chr4.3:11310055-11310074 | None:intergenic | 35.0% |
| ! | GGGTAATATGGTTTTCGAAA+GGG | - | chr4.3:11306865-11306884 | MS.gene030926:intron | 35.0% |
| ! | GTACACCATTTCTTTAGAGA+TGG | + | chr4.3:11306611-11306630 | None:intergenic | 35.0% |
| ! | TATGCAAGGAGTTCTAATTG+TGG | - | chr4.3:11306892-11306911 | MS.gene030926:intron | 35.0% |
| ! | TGGGTAATATGGTTTTCGAA+AGG | - | chr4.3:11306864-11306883 | MS.gene030926:intron | 35.0% |
| ! | TGGTTAAATGGACTTAGACA+AGG | - | chr4.3:11306482-11306501 | MS.gene030926:intron | 35.0% |
| ! | TGTAGCAATTTTGCTCTTCT+AGG | - | chr4.3:11308275-11308294 | MS.gene030926:intron | 35.0% |
| !! | CATGGATAAAAAGGTATTCC+CGG | - | chr4.3:11310131-11310150 | MS.gene030926:intron | 35.0% |
| !! | TAGTTTGCTTCAAGAAGACA+AGG | - | chr4.3:11309924-11309943 | MS.gene030926:CDS | 35.0% |
| !! | TTTAACGGCGATGTTTTTGA+TGG | - | chr4.3:11306455-11306474 | MS.gene030926:intron | 35.0% |
| !! | TTTGGACGGACTAATAATAC+TGG | - | chr4.3:11308413-11308432 | MS.gene030926:CDS | 35.0% |
| !!! | GCTTGTGGATATTTTAACCA+AGG | + | chr4.3:11308749-11308768 | None:intergenic | 35.0% |
| AAATACTCACCTTGCAGTAC+CGG | + | chr4.3:11309742-11309761 | None:intergenic | 40.0% | |
| AACATGGAGTAAAGGCCTAA+AGG | - | chr4.3:11306547-11306566 | MS.gene030926:intron | 40.0% | |
| AAGGATGTACTTTCCTAAGG+AGG | - | chr4.3:11307305-11307324 | MS.gene030926:intron | 40.0% | |
| AAGGCAGCGGAAAATTTACT+TGG | - | chr4.3:11306363-11306382 | MS.gene030926:CDS | 40.0% | |
| AAGGGAAAATAGATGGAAGG+GGG | - | chr4.3:11306420-11306439 | MS.gene030926:CDS | 40.0% | |
| ACTGTTCTGTAGACTTCTAC+TGG | - | chr4.3:11307349-11307368 | MS.gene030926:intron | 40.0% | |
| AGATGGATCGGTATATGAAG+GGG | - | chr4.3:11306112-11306131 | MS.gene030926:CDS | 40.0% | |
| AGGATGTACTTTCCTAAGGA+GGG | - | chr4.3:11307306-11307325 | MS.gene030926:intron | 40.0% | |
| AGGGAAAGTAATTTACCTGG+TGG | - | chr4.3:11309240-11309259 | MS.gene030926:CDS | 40.0% | |
| ATCAACTTCCTTGTTACCGA+TGG | + | chr4.3:11309709-11309728 | None:intergenic | 40.0% | |
| ATCCATCGAATAACACTGAG+AGG | - | chr4.3:11307909-11307928 | MS.gene030926:CDS | 40.0% | |
| ATCGAATAACACTGAGAGGT+GGG | - | chr4.3:11307913-11307932 | MS.gene030926:CDS | 40.0% | |
| ATTATTGCCCTATGGTCTTC+AGG | - | chr4.3:11307376-11307395 | MS.gene030926:intron | 40.0% | |
| CAGATGGATCGGTATATGAA+GGG | - | chr4.3:11306111-11306130 | MS.gene030926:CDS | 40.0% | |
| CAGGGAAAGGGATACTTATA+TGG | - | chr4.3:11306156-11306175 | MS.gene030926:intron | 40.0% | |
| CTAAAGGACATATCTTCAGC+TGG | - | chr4.3:11307600-11307619 | MS.gene030926:intron | 40.0% | |
| CTCAGATTGACCTTCATTAG+AGG | + | chr4.3:11306834-11306853 | None:intergenic | 40.0% | |
| CTCTAATGAAGGTCAATCTG+AGG | - | chr4.3:11306832-11306851 | MS.gene030926:intron | 40.0% | |
| CTGGAAAGATTATTGCCCTA+TGG | - | chr4.3:11307368-11307387 | MS.gene030926:intron | 40.0% | |
| GAGTACATGATGTCCATTTG+TGG | - | chr4.3:11307567-11307586 | MS.gene030926:intron | 40.0% | |
| GATGGAAAAATGACAGGGAA+AGG | - | chr4.3:11306143-11306162 | MS.gene030926:intron | 40.0% | |
| GCAACTAACAACAAGCCTTT+CGG | + | chr4.3:11309618-11309637 | None:intergenic | 40.0% | |
| GCAATTAGGAGTAAACATGC+CGG | - | chr4.3:11309891-11309910 | MS.gene030926:CDS | 40.0% | |
| GGTATCTGGTATGGGTAATA+TGG | - | chr4.3:11306853-11306872 | MS.gene030926:intron | 40.0% | |
| GGTTAAAATATCCACAAGCC+AGG | - | chr4.3:11308750-11308769 | MS.gene030926:CDS | 40.0% | |
| GTTCCTAATGTAATAGCGAG+CGG | + | chr4.3:11309787-11309806 | None:intergenic | 40.0% | |
| TAGAAGTCTACAGAACAGTG+TGG | + | chr4.3:11307348-11307367 | None:intergenic | 40.0% | |
| TAGAGCACAATCACCACAAA+TGG | + | chr4.3:11307583-11307602 | None:intergenic | 40.0% | |
| TAGAGCTCCAGAGAATCTAA+AGG | - | chr4.3:11309373-11309392 | MS.gene030926:CDS | 40.0% | |
| TATGAAGGGGATTGGATAGA+TGG | - | chr4.3:11306125-11306144 | MS.gene030926:CDS | 40.0% | |
| TATGGTCCATCAAGCAAAAG+AGG | + | chr4.3:11307713-11307732 | None:intergenic | 40.0% | |
| TCAATTCTCAGGTACACTGT+AGG | - | chr4.3:11307219-11307238 | MS.gene030926:intron | 40.0% | |
| TCAGATGGATCGGTATATGA+AGG | - | chr4.3:11306110-11306129 | MS.gene030926:CDS | 40.0% | |
| TGAACTTCTCCTTGTCTGAA+GGG | - | chr4.3:11309221-11309240 | MS.gene030926:CDS | 40.0% | |
| TGAGCAGAACCTATAACAAG+AGG | + | chr4.3:11307821-11307840 | None:intergenic | 40.0% | |
| TGAGTGCACAAAGCATATTG+AGG | + | chr4.3:11308843-11308862 | None:intergenic | 40.0% | |
| TGCAATAGCAGGATCTAACA+AGG | + | chr4.3:11309023-11309042 | None:intergenic | 40.0% | |
| TTATCGCAGACCTCTAATGA+AGG | - | chr4.3:11306821-11306840 | MS.gene030926:intron | 40.0% | |
| TTCAGCTTTCTTGCTTTCGT+TGG | - | chr4.3:11308459-11308478 | MS.gene030926:CDS | 40.0% | |
| TTCTCTAGACTGCAAGTTCT+TGG | - | chr4.3:11309304-11309323 | MS.gene030926:CDS | 40.0% | |
| TTGAACTTCTCCTTGTCTGA+AGG | - | chr4.3:11309220-11309239 | MS.gene030926:CDS | 40.0% | |
| TTGGAGAAAGAGCTAGGATA+AGG | - | chr4.3:11307286-11307305 | MS.gene030926:intron | 40.0% | |
| TTGTGGTGATTGTGCTCTAA+AGG | - | chr4.3:11307584-11307603 | MS.gene030926:intron | 40.0% | |
| TTTGCTTCAAGAAGACAAGG+TGG | - | chr4.3:11309927-11309946 | MS.gene030926:CDS | 40.0% | |
| ! | AATGGACTTAGACAAGGATC+TGG | - | chr4.3:11306488-11306507 | MS.gene030926:intron | 40.0% |
| ! | ACATTGAGAGCATACTCCAT+CGG | - | chr4.3:11309690-11309709 | MS.gene030926:CDS | 40.0% |
| ! | ATCAGAAGTAGAGCTTTTCG+AGG | - | chr4.3:11309954-11309973 | MS.gene030926:CDS | 40.0% |
| ! | ATGTTCCTTTTCCGTCCTTT+AGG | + | chr4.3:11306565-11306584 | None:intergenic | 40.0% |
| ! | CAATCTGAGGTATCTGGTAT+GGG | - | chr4.3:11306845-11306864 | MS.gene030926:intron | 40.0% |
| ! | GCCTACATTCCTCTTGTTAT+AGG | - | chr4.3:11307809-11307828 | MS.gene030926:intron | 40.0% |
| ! | TAGTCACCTCTTTTGCTTGA+TGG | - | chr4.3:11307704-11307723 | MS.gene030926:intron | 40.0% |
| ! | TCAATCTGAGGTATCTGGTA+TGG | - | chr4.3:11306844-11306863 | MS.gene030926:intron | 40.0% |
| ! | TGAACTTTTCGATCTACCAC+TGG | + | chr4.3:11306708-11306727 | None:intergenic | 40.0% |
| !! | CTGAAGCTTAATTTGCAGCT+TGG | - | chr4.3:11307037-11307056 | MS.gene030926:intron | 40.0% |
| !! | CTGATGAGAAATTGATAGCG+AGG | - | chr4.3:11308712-11308731 | MS.gene030926:CDS | 40.0% |
| !! | CTGATTTTGGAGAAAGAGCT+AGG | - | chr4.3:11307280-11307299 | MS.gene030926:intron | 40.0% |
| !! | GAAGTTGATCTTTTACTGCC+CGG | - | chr4.3:11309720-11309739 | MS.gene030926:CDS | 40.0% |
| !! | GCGATGTTTTTGATGGTTGT+TGG | - | chr4.3:11306462-11306481 | MS.gene030926:intron | 40.0% |
| !! | GCTTTTCGAGGTTTATGATG+TGG | - | chr4.3:11309966-11309985 | MS.gene030926:CDS | 40.0% |
| !! | GTTGTTTTCTTCGTTAGGTG+CGG | - | chr4.3:11308005-11308024 | MS.gene030926:intron | 40.0% |
| !! | TTAATTTGCAGCTTGGCATC+AGG | - | chr4.3:11307044-11307063 | MS.gene030926:intron | 40.0% |
| !!! | GAGCTTTTTCAGAGAGACTA+CGG | + | chr4.3:11306682-11306701 | None:intergenic | 40.0% |
| AAAGGCCTAAAGGACGGAAA+AGG | - | chr4.3:11306557-11306576 | MS.gene030926:intron | 45.0% | |
| AACACTGAGAGGTGGGAAAA+AGG | - | chr4.3:11307920-11307939 | MS.gene030926:CDS | 45.0% | |
| AAGTACGAGGGTGAATTCTC+AGG | - | chr4.3:11306191-11306210 | MS.gene030926:intron | 45.0% | |
| AAGTCTACAGAACAGTGTGG+AGG | + | chr4.3:11307345-11307364 | None:intergenic | 45.0% | |
| AATACTCACCTTGCAGTACC+GGG | + | chr4.3:11309741-11309760 | None:intergenic | 45.0% | |
| ACGAACGCCTTTAGATTCTC+TGG | + | chr4.3:11309383-11309402 | None:intergenic | 45.0% | |
| AGCAAACTAGTAGCTTGAGC+CGG | + | chr4.3:11309913-11309932 | None:intergenic | 45.0% | |
| AGCATACTCCATCGGTAACA+AGG | - | chr4.3:11309698-11309717 | MS.gene030926:CDS | 45.0% | |
| AGTACGAGGGTGAATTCTCA+GGG | - | chr4.3:11306192-11306211 | MS.gene030926:intron | 45.0% | |
| ATGAATGCTCATCACGGGAT+TGG | - | chr4.3:11306281-11306300 | MS.gene030926:intron | 45.0% | |
| ATGGAAGGGGGATTATGAAG+TGG | - | chr4.3:11306432-11306451 | MS.gene030926:CDS | 45.0% | |
| ATTAGAGGTCTGCGATAACG+CGG | + | chr4.3:11306819-11306838 | None:intergenic | 45.0% | |
| CAGGTCATATCATAACCACC+AGG | + | chr4.3:11309258-11309277 | None:intergenic | 45.0% | |
| CATCGAATAACACTGAGAGG+TGG | - | chr4.3:11307912-11307931 | MS.gene030926:CDS | 45.0% | |
| CATCGTCGTTACGATCTGAA+GGG | - | chr4.3:11308070-11308089 | MS.gene030926:intron | 45.0% | |
| GACATATGCAATCGTCAGCA+GGG | + | chr4.3:11306784-11306803 | None:intergenic | 45.0% | |
| GAGCAGTTGATCATTCCGAA+AGG | - | chr4.3:11309600-11309619 | MS.gene030926:CDS | 45.0% | |
| GATCGGTATATGAAGGGGAT+TGG | - | chr4.3:11306117-11306136 | MS.gene030926:CDS | 45.0% | |
| GATCTGAAGGGATCTTCTCA+AGG | - | chr4.3:11308082-11308101 | MS.gene030926:intron | 45.0% | |
| GCTTCAGATAATAGCTTCGG+CGG | + | chr4.3:11307024-11307043 | None:intergenic | 45.0% | |
| GCTTTCTTGCTTTCGTTGGT+AGG | - | chr4.3:11308463-11308482 | MS.gene030926:CDS | 45.0% | |
| GGCACATTCGCAAAATCGAA+CGG | - | chr4.3:11306233-11306252 | MS.gene030926:intron | 45.0% | |
| GGGAATTATCTTCACGGTCA+CGG | - | chr4.3:11306212-11306231 | MS.gene030926:intron | 45.0% | |
| GGGATACTTATATGGCCATC+AGG | - | chr4.3:11306164-11306183 | MS.gene030926:intron | 45.0% | |
| GTACACATGGTCAGATGGAT+CGG | - | chr4.3:11306100-11306119 | MS.gene030926:CDS | 45.0% | |
| GTCAATTGTGAACCCTCCTT+AGG | + | chr4.3:11307321-11307340 | None:intergenic | 45.0% | |
| TGGAAAGAAGGAATTCGCGA+AGG | - | chr4.3:11306344-11306363 | MS.gene030926:CDS | 45.0% | |
| TGGAGGATGAATGCTCATCA+CGG | - | chr4.3:11306275-11306294 | MS.gene030926:intron | 45.0% | |
| TGGAGTAAAGGCCTAAAGGA+CGG | - | chr4.3:11306551-11306570 | MS.gene030926:intron | 45.0% | |
| TTGCCGCTCGCTATTACATT+AGG | - | chr4.3:11309781-11309800 | MS.gene030926:CDS | 45.0% | |
| ! | CACCTCTCAGTGTTATTCGA+TGG | + | chr4.3:11307914-11307933 | None:intergenic | 45.0% |
| ! | GAAGGTCAATCTGAGGTATC+TGG | - | chr4.3:11306839-11306858 | MS.gene030926:intron | 45.0% |
| ! | GAAGTTCGGTCGTCTGATTT+TGG | - | chr4.3:11307267-11307286 | MS.gene030926:intron | 45.0% |
| ! | GATGGTTGTTTGCTACCAGA+AGG | + | chr4.3:11306593-11306612 | None:intergenic | 45.0% |
| ! | TTCAAGGGTATACTTCCCCA+CGG | - | chr4.3:11306068-11306087 | MS.gene030926:CDS | 45.0% |
| !! | AGAAATTGATAGCGAGGTCG+AGG | - | chr4.3:11308718-11308737 | MS.gene030926:CDS | 45.0% |
| !! | TAGGTGCGGTTTGTTGTCAT+GGG | - | chr4.3:11308019-11308038 | MS.gene030926:intron | 45.0% |
| !! | TTAGGTGCGGTTTGTTGTCA+TGG | - | chr4.3:11308018-11308037 | MS.gene030926:intron | 45.0% |
| !! | AAAAAATAAAAATACAATAA+TGG | - | chr4.3:11308598-11308617 | MS.gene030926:intron | 5.0% |
| AACGGCTGTGTTTACACAGG+TGG | - | chr4.3:11306251-11306270 | MS.gene030926:intron | 50.0% | |
| ACCAGCCGCATCAATTTGTG+AGG | + | chr4.3:11308675-11308694 | None:intergenic | 50.0% | |
| ATGTGTACTTCCCATTGCCG+TGG | + | chr4.3:11306088-11306107 | None:intergenic | 50.0% | |
| CCAGCCGCATCAATTTGTGA+GGG | + | chr4.3:11308674-11308693 | None:intergenic | 50.0% | |
| CCATCAGGAGCAAAGTACGA+GGG | - | chr4.3:11306179-11306198 | MS.gene030926:intron | 50.0% | |
| CCATCGTCGTTACGATCTGA+AGG | - | chr4.3:11308069-11308088 | MS.gene030926:intron | 50.0% | |
| CCTTCAGATCGTAACGACGA+TGG | + | chr4.3:11308072-11308091 | None:intergenic | 50.0% | |
| CGACATATGCAATCGTCAGC+AGG | + | chr4.3:11306785-11306804 | None:intergenic | 50.0% | |
| CTCAGATTGCCGGTGCAATT+AGG | - | chr4.3:11309877-11309896 | MS.gene030926:CDS | 50.0% | |
| GATAATAGCTTCGGCGGTGT+TGG | + | chr4.3:11307018-11307037 | None:intergenic | 50.0% | |
| GCTGTGTTTACACAGGTGGA+TGG | - | chr4.3:11306255-11306274 | MS.gene030926:intron | 50.0% | |
| GGAGGATGAATGCTCATCAC+GGG | - | chr4.3:11306276-11306295 | MS.gene030926:intron | 50.0% | |
| GTATACTTCCCCACGGCAAT+GGG | - | chr4.3:11306075-11306094 | MS.gene030926:CDS | 50.0% | |
| GTGTTTACACAGGTGGATGG+AGG | - | chr4.3:11306258-11306277 | MS.gene030926:intron | 50.0% | |
| TACTGACGCTGTATTGCTCC+AGG | + | chr4.3:11309413-11309432 | None:intergenic | 50.0% | |
| TCGAACGGCTGTGTTTACAC+AGG | - | chr4.3:11306248-11306267 | MS.gene030926:intron | 50.0% | |
| TCTGAAAAAGCTCGAGCCAG+TGG | - | chr4.3:11306689-11306708 | MS.gene030926:CDS | 50.0% | |
| TGTGTACTTCCCATTGCCGT+GGG | + | chr4.3:11306087-11306106 | None:intergenic | 50.0% | |
| TTCCCTCTAATGTGAGGTCC+AGG | + | chr4.3:11309669-11309688 | None:intergenic | 50.0% | |
| ! | ACGGCAATGGGAAGTACACA+TGG | - | chr4.3:11306087-11306106 | MS.gene030926:CDS | 50.0% |
| ! | CTAATTGCACCGGCAATCTG+AGG | + | chr4.3:11309879-11309898 | None:intergenic | 50.0% |
| ! | GGGAAGTACACATGGTCAGA+TGG | - | chr4.3:11306095-11306114 | MS.gene030926:CDS | 50.0% |
| ! | TTTTACTGCCCGGTACTGCA+AGG | - | chr4.3:11309730-11309749 | MS.gene030926:CDS | 50.0% |
| ACGCCTGGACCTCACATTAG+AGG | - | chr4.3:11309663-11309682 | MS.gene030926:CDS | 55.0% | |
| CCCTCACAAATTGATGCGGC+TGG | - | chr4.3:11308671-11308690 | MS.gene030926:CDS | 55.0% | |
| CCCTCGTACTTTGCTCCTGA+TGG | + | chr4.3:11306182-11306201 | None:intergenic | 55.0% | |
| CGCCTGGACCTCACATTAGA+GGG | - | chr4.3:11309664-11309683 | MS.gene030926:CDS | 55.0% | |
| GAAGGAATTCGCGAAGGCAG+CGG | - | chr4.3:11306350-11306369 | MS.gene030926:CDS | 55.0% | |
| GCCATCAGGAGCAAAGTACG+AGG | - | chr4.3:11306178-11306197 | MS.gene030926:intron | 55.0% | |
| GGTATACTTCCCCACGGCAA+TGG | - | chr4.3:11306074-11306093 | MS.gene030926:CDS | 55.0% | |
| GTGTACTTCCCATTGCCGTG+GGG | + | chr4.3:11306086-11306105 | None:intergenic | 55.0% | |
| TATCCACAAGCCAGGTTGCG+AGG | - | chr4.3:11308758-11308777 | MS.gene030926:CDS | 55.0% | |
| TCCTCATTCACCTCGCAACC+TGG | + | chr4.3:11308771-11308790 | None:intergenic | 55.0% | |
| TGACGCTGTATTGCTCCAGG+AGG | + | chr4.3:11309410-11309429 | None:intergenic | 55.0% | |
| CGAACTTCGCGTGCAGGAAC+CGG | + | chr4.3:11307255-11307274 | None:intergenic | 60.0% | |
| CGGTTCCTGCACGCGAAGTT+CGG | - | chr4.3:11307253-11307272 | MS.gene030926:intron | 60.0% | |
| GCCAGGTTGCGAGGTGAATG+AGG | - | chr4.3:11308767-11308786 | MS.gene030926:CDS | 60.0% | |
| GCGAGGTCGAGGTACAACCT+TGG | - | chr4.3:11308729-11308748 | MS.gene030926:CDS | 60.0% | |
| GGTCTGCGATAACGCGGATG+AGG | + | chr4.3:11306813-11306832 | None:intergenic | 60.0% | |
| ! | AAGGCGTTCGTCGAACCTCC+TGG | - | chr4.3:11309392-11309411 | MS.gene030926:CDS | 60.0% |
| ! | TCACCTCGCAACCTGGCTTG+TGG | + | chr4.3:11308764-11308783 | None:intergenic | 60.0% |
| AGCTTCGTCAACGCGACGCC+TGG | - | chr4.3:11309648-11309667 | MS.gene030926:CDS | 65.0% | |
| GACGACCGAACTTCGCGTGC+AGG | + | chr4.3:11307261-11307280 | None:intergenic | 65.0% | |
| ! | GGCGTCGCGTTGACGAAGCT+CGG | + | chr4.3:11309648-11309667 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 11305874 | 11310164 | 11305874 | ID=MS.gene030926 |
| chr4.3 | mRNA | 11305874 | 11310164 | 11305874 | ID=MS.gene030926.t1;Parent=MS.gene030926 |
| chr4.3 | exon | 11310148 | 11310164 | 11310148 | ID=MS.gene030926.t1.exon1;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11310148 | 11310164 | 11310148 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11308973 | 11310016 | 11308973 | ID=MS.gene030926.t1.exon2;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11308973 | 11310016 | 11308973 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11308641 | 11308808 | 11308641 | ID=MS.gene030926.t1.exon3;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11308641 | 11308808 | 11308641 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11308340 | 11308505 | 11308340 | ID=MS.gene030926.t1.exon4;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11308340 | 11308505 | 11308340 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11308097 | 11308207 | 11308097 | ID=MS.gene030926.t1.exon5;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11308097 | 11308207 | 11308097 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11307829 | 11308016 | 11307829 | ID=MS.gene030926.t1.exon6;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11307829 | 11308016 | 11307829 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11306586 | 11306740 | 11306586 | ID=MS.gene030926.t1.exon7;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11306586 | 11306740 | 11306586 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11306287 | 11306455 | 11306287 | ID=MS.gene030926.t1.exon8;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11306287 | 11306455 | 11306287 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| chr4.3 | exon | 11305874 | 11306156 | 11305874 | ID=MS.gene030926.t1.exon9;Parent=MS.gene030926.t1 |
| chr4.3 | CDS | 11305874 | 11306156 | 11305874 | ID=cds.MS.gene030926.t1;Parent=MS.gene030926.t1 |
| Gene Sequence |
| Protein sequence |
