AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94097

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94097.t1 MTR_5g459450 99.318 733 5 0 1 733 1 733 0.0 1513
MS.gene94097.t1 MTR_3g073100 75.310 725 143 8 32 732 19 731 0.0 1097
MS.gene94097.t1 MTR_3g097260 66.913 677 194 7 64 732 50 704 0.0 884
MS.gene94097.t1 MTR_8g095170 62.123 697 207 8 51 732 12 666 0.0 865
MS.gene94097.t1 MTR_8g095170 63.763 574 180 5 51 611 12 570 0.0 754
MS.gene94097.t1 MTR_8g039100 50.667 750 303 12 37 732 14 750 0.0 678
MS.gene94097.t1 MTR_1g050740 49.665 747 276 14 64 732 56 780 0.0 659
MS.gene94097.t1 MTR_1g062740 42.481 798 307 15 60 729 42 815 0.0 587
MS.gene94097.t1 MTR_8g088930 40.131 765 342 17 65 727 9 759 1.43e-180 535
MS.gene94097.t1 MTR_8g088930 40.078 766 342 17 65 727 9 760 1.68e-180 534
MS.gene94097.t1 MTR_3g014650 62.830 417 137 7 320 732 371 773 2.77e-167 501
MS.gene94097.t1 MTR_3g014650 52.663 169 68 1 64 232 84 240 1.65e-52 195
MS.gene94097.t1 MTR_3g014650 32.258 124 84 0 70 193 147 270 3.45e-15 80.1
MS.gene94097.t1 MTR_3g014650 44.318 88 49 0 69 156 169 256 7.39e-14 75.9
MS.gene94097.t1 MTR_7g089950 57.882 425 156 7 311 732 387 791 5.62e-162 488
MS.gene94097.t1 MTR_7g089950 60.714 168 66 0 65 232 67 234 7.08e-66 233
MS.gene94097.t1 MTR_7g089950 45.570 79 43 0 70 148 164 242 4.73e-12 70.1
MS.gene94097.t1 MTR_7g089950 35.354 99 64 0 70 168 141 239 1.35e-11 68.6
MS.gene94097.t1 MTR_7g089950 34.343 99 56 1 136 234 69 158 3.21e-11 67.4
MS.gene94097.t1 MTR_8g088930 43.248 585 263 10 65 582 9 591 1.45e-156 469
MS.gene94097.t1 MTR_8g088930 43.248 585 263 10 65 582 9 591 1.47e-156 469
MS.gene94097.t1 MTR_3g005910 84.722 72 11 0 444 515 1 72 1.01e-34 126
MS.gene94097.t1 MTR_8g080860 39.205 176 107 0 57 232 4 179 3.84e-34 132
MS.gene94097.t1 MTR_8g080860 34.591 159 104 0 69 227 108 266 1.06e-23 102
MS.gene94097.t1 MTR_8g080860 37.681 138 86 0 68 205 130 267 1.69e-21 95.9
MS.gene94097.t1 MTR_8g080860 39.205 176 107 0 57 232 8 183 4.03e-34 132
MS.gene94097.t1 MTR_8g080860 34.591 159 104 0 69 227 112 270 1.09e-23 102
MS.gene94097.t1 MTR_8g080860 37.681 138 86 0 68 205 134 271 1.74e-21 95.9
MS.gene94097.t1 MTR_4g107460 37.288 177 108 1 56 232 46 219 1.72e-31 126
MS.gene94097.t1 MTR_4g107460 27.200 250 150 5 94 318 11 253 5.31e-18 86.7
MS.gene94097.t1 MTR_8g080340 39.216 153 92 1 53 205 4 155 5.69e-30 117
MS.gene94097.t1 MTR_8g092090 35.088 171 109 1 62 232 35 203 6.37e-26 107
MS.gene94097.t1 MTR_8g092090 31.847 157 105 1 59 215 78 232 2.13e-17 82.8
MS.gene94097.t1 MTR_8g092090 32.026 153 96 1 88 232 5 157 1.57e-15 77.4
MS.gene94097.t1 MTR_5g058920 38.650 163 100 0 70 232 198 360 1.12e-25 111
MS.gene94097.t1 MTR_5g058920 38.889 126 77 0 71 196 245 370 1.59e-18 89.4
MS.gene94097.t1 MTR_7g451440 35.928 167 107 0 66 232 189 355 3.52e-25 109
MS.gene94097.t1 MTR_7g451440 40.625 128 76 0 71 198 240 367 4.56e-22 100
MS.gene94097.t1 MTR_7g451440 36.449 107 68 0 70 176 262 368 1.94e-14 76.6
MS.gene94097.t1 MTR_3g072650 33.684 190 124 1 45 232 159 348 4.18e-25 108
MS.gene94097.t1 MTR_3g072650 33.684 190 124 1 45 232 159 348 5.47e-25 108
MS.gene94097.t1 MTR_6g043150 32.143 224 121 3 69 268 79 295 5.61e-25 107
MS.gene94097.t1 MTR_6g043150 35.135 185 97 1 66 227 7 191 6.90e-25 106
MS.gene94097.t1 MTR_6g043150 30.986 213 119 2 40 224 114 326 6.18e-20 92.0
MS.gene94097.t1 MTR_6g043150 31.325 166 114 0 67 232 54 219 7.77e-17 82.8
MS.gene94097.t1 MTR_5g010840 39.456 147 81 1 68 214 111 249 7.75e-25 107
MS.gene94097.t1 MTR_5g010840 33.333 171 99 1 70 225 182 352 4.90e-22 99.4
MS.gene94097.t1 MTR_5g010840 40.404 99 59 0 70 168 266 364 2.62e-16 82.0
MS.gene94097.t1 MTR_5g010840 30.952 126 87 0 67 192 240 365 9.04e-11 65.1
MS.gene94097.t1 MTR_4g099180 35.928 167 107 0 66 232 169 335 6.26e-24 105
MS.gene94097.t1 MTR_4g099180 36.719 128 81 0 71 198 220 347 2.75e-18 88.6
MS.gene94097.t1 MTR_4g099180 33.019 106 71 0 71 176 243 348 2.09e-11 67.0
MS.gene94097.t1 MTR_2g078470 40.559 143 85 0 67 209 215 357 1.01e-23 104
MS.gene94097.t1 MTR_2g078470 32.258 217 115 3 41 227 46 260 1.10e-23 103
MS.gene94097.t1 MTR_2g078470 30.932 236 114 2 61 250 2 234 2.96e-21 96.7
MS.gene94097.t1 MTR_2g078470 31.183 186 125 1 65 250 190 372 9.25e-20 92.4
MS.gene94097.t1 MTR_2g078470 26.587 252 166 4 67 300 123 373 1.14e-18 89.0
MS.gene94097.t1 MTR_8g007500 34.444 180 115 1 56 232 181 360 2.95e-23 103
MS.gene94097.t1 MTR_8g007500 39.844 128 77 0 71 198 245 372 8.55e-21 96.7
MS.gene94097.t1 MTR_8g007500 35.849 106 68 0 71 176 268 373 1.40e-14 77.4
MS.gene94097.t1 MTR_8g080310 35.915 142 91 0 91 232 9 150 1.53e-20 89.4
MS.gene94097.t1 MTR_8g080310 33.333 126 84 0 107 232 2 127 2.28e-16 77.4
MS.gene94097.t1 MTR_8g095240 34.896 192 92 4 74 232 9 200 2.16e-20 95.1
MS.gene94097.t1 MTR_8g095240 30.500 200 105 2 67 232 48 247 5.80e-18 87.4
MS.gene94097.t1 MTR_8g095240 29.545 176 113 2 68 232 118 293 1.67e-16 83.2
MS.gene94097.t1 MTR_8g095240 36.301 146 92 1 90 234 2 147 8.14e-16 80.9
MS.gene94097.t1 MTR_8g095240 31.293 147 100 1 71 216 177 323 1.32e-13 73.9
MS.gene94097.t1 MTR_8g095240 30.137 146 100 1 38 183 193 336 4.16e-11 66.2
MS.gene94097.t1 MTR_8g080350 35.616 146 79 2 66 196 192 337 2.50e-17 85.1
MS.gene94097.t1 MTR_8g080350 29.897 194 98 2 68 223 125 318 1.58e-16 82.8
MS.gene94097.t1 MTR_8g080350 29.710 138 97 0 69 206 103 240 2.12e-14 76.3
MS.gene94097.t1 MTR_8g080350 27.097 155 88 2 96 227 86 238 3.78e-11 66.2
MS.gene94097.t1 MTR_3g005900 72.000 50 10 1 571 620 1 46 6.87e-16 72.8
MS.gene94097.t1 MTR_4g099180 34.426 122 80 0 81 202 161 282 9.49e-16 79.3
MS.gene94097.t1 MTR_4g099180 36.134 119 76 0 66 184 169 287 4.27e-15 77.4
MS.gene94097.t1 MTR_4g099180 34.426 122 80 0 81 202 161 282 2.64e-15 78.2
MS.gene94097.t1 MTR_4g099180 37.069 116 73 0 66 181 169 284 1.08e-14 76.3
MS.gene94097.t1 MTR_1g112280 29.381 194 105 4 28 220 579 741 2.17e-14 77.4
MS.gene94097.t1 MTR_3g023310 33.600 125 70 2 84 208 11 122 4.03e-14 71.6
MS.gene94097.t1 MTR_8g092410 35.088 114 69 3 123 232 141 253 6.54e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94097.t1 AT1G21980 74.861 720 147 8 31 732 48 751 0.0 1082
MS.gene94097.t1 AT1G77740 75.035 713 147 7 39 732 53 753 0.0 1075
MS.gene94097.t1 AT1G77740 75.035 713 147 7 39 732 53 753 0.0 1075
MS.gene94097.t1 AT2G26420 60.140 715 232 12 47 732 28 718 0.0 838
MS.gene94097.t1 AT2G26420 60.140 715 232 12 47 732 28 718 0.0 838
MS.gene94097.t1 AT2G26420 59.664 714 223 11 47 732 28 704 0.0 832
MS.gene94097.t1 AT3G07960 54.144 724 246 15 64 732 22 714 0.0 739
MS.gene94097.t1 AT2G41210 52.210 724 274 13 64 732 65 771 0.0 727
MS.gene94097.t1 AT3G56960 52.407 727 273 14 64 732 67 778 0.0 725
MS.gene94097.t1 AT3G56960 52.407 727 273 14 64 732 67 778 0.0 725
MS.gene94097.t1 AT3G07960 55.226 574 190 10 64 583 22 582 0.0 619
MS.gene94097.t1 AT3G07960 55.226 574 190 10 64 583 22 582 0.0 619
MS.gene94097.t1 AT3G07960 32.432 148 95 1 39 181 61 208 1.66e-16 84.0
MS.gene94097.t1 AT3G07960 55.226 574 190 10 64 583 22 582 0.0 619
MS.gene94097.t1 AT3G07960 32.432 148 95 1 39 181 61 208 1.66e-16 84.0
MS.gene94097.t1 AT3G09920 41.432 782 330 15 63 732 47 812 0.0 576
MS.gene94097.t1 AT3G09920 41.432 782 330 15 63 732 47 812 0.0 576
MS.gene94097.t1 AT3G09920 41.432 782 330 15 63 732 47 812 0.0 576
MS.gene94097.t1 AT3G09920 41.432 782 330 15 63 732 47 812 0.0 576
MS.gene94097.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene94097.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene94097.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene94097.t1 AT1G60890 40.722 776 338 18 64 731 6 767 8.65e-180 533
MS.gene94097.t1 AT1G60890 40.722 776 338 18 64 731 18 779 9.04e-180 533
MS.gene94097.t1 AT1G01460 37.825 423 214 8 355 732 4 422 6.91e-81 265
MS.gene94097.t1 AT4G01190 38.095 399 189 6 371 730 12 391 3.18e-78 256
MS.gene94097.t1 AT4G01190 38.095 399 189 6 371 730 22 401 3.44e-78 257
MS.gene94097.t1 AT4G01190 38.095 399 189 6 371 730 22 401 3.44e-78 257
MS.gene94097.t1 AT1G77660 37.126 167 105 0 66 232 175 341 8.74e-27 114
MS.gene94097.t1 AT1G77660 36.508 126 80 0 71 196 226 351 1.13e-16 83.6
MS.gene94097.t1 AT1G21920 37.423 163 102 0 70 232 175 337 5.10e-25 108
MS.gene94097.t1 AT1G21920 38.281 128 79 0 71 198 222 349 4.15e-18 87.4
MS.gene94097.t1 AT1G21920 37.423 163 102 0 70 232 175 337 7.43e-25 108
MS.gene94097.t1 AT1G21920 38.281 128 79 0 71 198 222 349 5.51e-18 87.4
MS.gene94097.t1 AT2G35170 35.404 161 104 0 72 232 229 389 4.18e-23 103
MS.gene94097.t1 AT2G35170 37.984 129 80 0 71 199 274 402 1.08e-21 99.8
MS.gene94097.t1 AT4G17080 34.969 163 106 0 70 232 258 420 1.62e-22 102
MS.gene94097.t1 AT4G17080 37.209 129 81 0 71 199 305 433 4.66e-21 97.8
MS.gene94097.t1 AT4G17080 32.867 143 94 1 90 232 234 374 6.16e-13 72.4
MS.gene94097.t1 AT1G34260 34.158 202 103 10 398 579 1192 1383 1.82e-14 78.2
MS.gene94097.t1 AT1G34260 34.158 202 103 10 398 579 1192 1383 1.82e-14 78.2
MS.gene94097.t1 AT1G34260 34.158 202 103 10 398 579 1192 1383 1.82e-14 78.2
MS.gene94097.t1 AT1G34260 34.158 202 103 10 398 579 952 1143 1.89e-14 78.2
MS.gene94097.t1 AT1G75010 30.469 128 87 2 94 220 604 730 1.49e-12 71.6

Find 199 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATTGCGTTCTATATTT+TGG 0.084583 5.4:+46545929 MS.gene94097:CDS
CACCAGTGAATTCTCATATT+TGG 0.134783 5.4:-46544275 None:intergenic
TGACAACACTTATGACAAAA+TGG 0.237609 5.4:+46544818 MS.gene94097:CDS
CTGGTAAGGGTTCGTTAGTT+TGG 0.244235 5.4:+46542853 MS.gene94097:CDS
ACATTTGAGGAAGCTGTTTC+AGG 0.245765 5.4:+46543729 MS.gene94097:CDS
CACTGGTGACAAAATTCTTT+GGG 0.252892 5.4:+46544290 MS.gene94097:CDS
TTAATTTGCAATTGGGGATT+AGG 0.273921 5.4:+46543267 MS.gene94097:CDS
GCCAACCGTTCTGCTCTTGC+TGG 0.278983 5.4:-46545833 None:intergenic
ATCCAAAGCTATACTCAAAA+AGG 0.280883 5.4:+46546047 MS.gene94097:CDS
TCTCCACCGGCGGTGATTGC+TGG 0.283531 5.4:+46542348 MS.gene94097:CDS
CTTGGAAAACGAGAAAATTA+TGG 0.284377 5.4:+46544761 MS.gene94097:CDS
TGTTTCGTGTACAACGAAAT+TGG 0.287459 5.4:+46544591 MS.gene94097:CDS
TGAGCGGGATTGTGAGTTCT+TGG 0.304803 5.4:+46544743 MS.gene94097:CDS
AAATCAAATCGTCTATGAAT+TGG 0.308050 5.4:-46544479 None:intergenic
TCACTGGTGACAAAATTCTT+TGG 0.313285 5.4:+46544289 MS.gene94097:CDS
TGGAAACGTGGAAAAGCTTC+AGG 0.316635 5.4:+46542558 MS.gene94097:CDS
TGGCGTAACGGCGTTATATC+TGG 0.323084 5.4:+46542834 MS.gene94097:CDS
TCTTCAGAAAATCATTAATC+AGG 0.329444 5.4:+46545795 MS.gene94097:intron
TTCATAACACCTTGTCCTTT+CGG 0.334631 5.4:-46542918 None:intergenic
AATTATGGACTACAGTCTTT+TGG 0.340214 5.4:+46544776 MS.gene94097:CDS
TTCTGCTCTTGCTGGCATAT+TGG 0.341644 5.4:-46545825 None:intergenic
TAAGCCTCCCCGCTGCTATA+AGG 0.344398 5.4:-46545908 None:intergenic
ATGAAGATTCAACATGGTTT+TGG 0.351168 5.4:+46542936 MS.gene94097:CDS
TGGTAAGGGTTCGTTAGTTT+GGG 0.353178 5.4:+46542854 MS.gene94097:CDS
TCGAAGCAGAGTTGCAAGAT+AGG 0.359055 5.4:+46545003 MS.gene94097:CDS
GGTTCGTTAGTTTGGGTTAA+CGG 0.360690 5.4:+46542861 MS.gene94097:CDS
TTGATCCTAAGGAGAAGTTC+TGG 0.368369 5.4:+46543434 MS.gene94097:CDS
ATGGATCCGGGAAGTATCTA+TGG 0.372629 5.4:+46542508 MS.gene94097:CDS
GGACGTTACGTTTGGAAGAA+TGG 0.386687 5.4:+46542792 MS.gene94097:CDS
GACAACACTTATGACAAAAT+GGG 0.387432 5.4:+46544819 MS.gene94097:CDS
GAAGAATATTCATTGAAGAT+TGG 0.390671 5.4:+46546086 MS.gene94097:CDS
TTTGATGCTTAATTTGCAAT+TGG 0.398155 5.4:+46543259 MS.gene94097:CDS
TAATCATGAATCTGTCATCT+TGG 0.402081 5.4:-46543846 None:intergenic
TCTGTTGATACTACTGTTAG+TGG 0.407554 5.4:+46543011 MS.gene94097:CDS
ATGGTCAAGGACGTTACGTT+TGG 0.409474 5.4:+46542784 MS.gene94097:CDS
GTTTCATCAATCTCATCCTC+AGG 0.418360 5.4:-46544536 None:intergenic
GGATCCATTCGGTACGTTGC+CGG 0.418393 5.4:-46542493 None:intergenic
TTGATGAGGCGGGGTAATCT+TGG 0.419366 5.4:-46543479 None:intergenic
TTGGGTTAACGGAAACCGTT+TGG 0.419511 5.4:+46542872 MS.gene94097:CDS
GATAGGGATCGAGTTAAATC+TGG 0.420387 5.4:+46545020 MS.gene94097:CDS
GTCGGTCCATAGATACTTCC+CGG 0.423054 5.4:-46542514 None:intergenic
TTGATGCTTAATTTGCAATT+GGG 0.424572 5.4:+46543260 MS.gene94097:CDS
GGCAACGTACCGAATGGATC+CGG 0.425374 5.4:+46542495 MS.gene94097:CDS
TTTGATTCTTCAGACATTTG+AGG 0.429922 5.4:+46543716 MS.gene94097:intron
TTGGAGGGTTTGTGGGAGAA+TGG 0.430235 5.4:+46542891 MS.gene94097:CDS
TTCTATGCCGGAAGTTTCTC+CGG 0.430931 5.4:+46542474 MS.gene94097:CDS
TACGTTGCCGGAGAAACTTC+CGG 0.431893 5.4:-46542481 None:intergenic
CTTGTCCAGAACTTCTCCTT+AGG 0.442703 5.4:-46543439 None:intergenic
GACGTTACGTTTGGAAGAAT+GGG 0.445546 5.4:+46542793 MS.gene94097:CDS
CTGGTCAAACTATTTCTAAA+GGG 0.449919 5.4:+46543222 MS.gene94097:CDS
CTTAGAGAACTTTCCTCTCC+CGG 0.455504 5.4:+46543796 MS.gene94097:CDS
CATAGACGATTTGATTTGAA+AGG 0.457560 5.4:+46544485 MS.gene94097:CDS
GTTCAGATCAAGGTCTTTGA+GGG 0.462840 5.4:-46544564 None:intergenic
ATCAAACCGCGGAGTTTCGA+TGG 0.467094 5.4:+46543497 MS.gene94097:CDS
CAAATGGCTGATTCCACCAT+TGG 0.468458 5.4:-46545882 None:intergenic
TCCTTGTTGTTTCTCTTCTG+AGG 0.469889 5.4:+46543190 MS.gene94097:CDS
TCCGATAGAAAACACGGGTT+CGG 0.471872 5.4:+46542702 MS.gene94097:CDS
AATCATGAATCTGTCATCTT+GGG 0.472481 5.4:-46543845 None:intergenic
TAACGGCGTTATATCTGGTA+AGG 0.473277 5.4:+46542839 MS.gene94097:CDS
GTACATTGTGTGAAACCTAT+TGG 0.473664 5.4:+46544313 MS.gene94097:CDS
GTGATACATATCGCGGGTCA+TGG 0.475326 5.4:+46542676 MS.gene94097:CDS
CCTGGTCAAACTATTTCTAA+AGG 0.477641 5.4:+46543221 MS.gene94097:CDS
TCAGATCCGGTTTATTGTGA+TGG 0.478024 5.4:+46544433 MS.gene94097:intron
GAAACCGTTTGGAGGGTTTG+TGG 0.478922 5.4:+46542883 MS.gene94097:CDS
GAAGAGCAACATTCCTGAAC+CGG 0.481606 5.4:+46542308 MS.gene94097:CDS
CCCTCGTAAGTCGCGCCTGA+AGG 0.482364 5.4:-46542600 None:intergenic
GATTGCCCATCACAATAAAC+CGG 0.485074 5.4:-46544439 None:intergenic
AAACCGTTTGGAGGGTTTGT+GGG 0.486108 5.4:+46542884 MS.gene94097:CDS
ATTTGAATCCTTATAGCAGC+GGG 0.489048 5.4:+46545900 MS.gene94097:CDS
GGATGCTTTCGAAACTCATC+AGG 0.490101 5.4:-46543170 None:intergenic
ATACCAGTGCGTAGAAGAAA+AGG 0.493562 5.4:-46544849 None:intergenic
TCGGGTCGAATGGAAGGATT+CGG 0.497771 5.4:+46542633 MS.gene94097:CDS
GATACTACTGTTAGTGGTAG+AGG 0.499269 5.4:+46543017 MS.gene94097:CDS
GATTATATGTTGGCTATATG+TGG 0.502251 5.4:+46543763 MS.gene94097:CDS
AACTCCGCGGTTTGATGAGG+CGG 0.504312 5.4:-46543490 None:intergenic
AGTTCAGATCAAGGTCTTTG+AGG 0.508946 5.4:-46544565 None:intergenic
GATTCCCAAATACAAATCCT+AGG 0.509645 5.4:-46543062 None:intergenic
CAGATCCGGTTTATTGTGAT+GGG 0.510029 5.4:+46544434 MS.gene94097:intron
GTTGCATGTACGAAGGTGAA+TGG 0.510431 5.4:+46542538 MS.gene94097:CDS
GTGGAAAAGCTTCAGGGAAA+GGG 0.511451 5.4:+46542565 MS.gene94097:CDS
ACTCCGCGGTTTGATGAGGC+GGG 0.514713 5.4:-46543489 None:intergenic
CGCTGCTATAAGGATTCAAA+TGG 0.515820 5.4:-46545898 None:intergenic
GAAACCTATTGGAGGCCAAA+AGG 0.519281 5.4:+46544324 MS.gene94097:CDS
GAAGGATTCGGAACATTCGT+TGG 0.521458 5.4:+46542645 MS.gene94097:CDS
TCTTCTGAGGTTAAGAGACC+TGG 0.521675 5.4:+46543203 MS.gene94097:CDS
GCAATCACCGCCGGTGGAGA+AGG 0.522071 5.4:-46542345 None:intergenic
AAACTTACTTAATAAGATCC+TGG 0.522332 5.4:-46544616 None:intergenic
CGTGGAAAAGCTTCAGGGAA+AGG 0.523548 5.4:+46542564 MS.gene94097:CDS
AGATACTTCCCGGATCCATT+CGG 0.526389 5.4:-46542504 None:intergenic
TTAGAGAACTTTCCTCTCCC+GGG 0.528049 5.4:+46543797 MS.gene94097:CDS
CGAAGCAGAGTTGCAAGATA+GGG 0.528077 5.4:+46545004 MS.gene94097:CDS
CCGAACGGAGATTTCTATGC+CGG 0.528423 5.4:+46542462 MS.gene94097:CDS
GTGATTTATACGAAGGGTGG+TGG 0.528555 5.4:+46542745 MS.gene94097:CDS
CAACATTCCTGAACCGGAGA+AGG 0.528680 5.4:+46542314 MS.gene94097:CDS
AGAGTTCAAGTCGGGTCGAA+TGG 0.530606 5.4:+46542623 MS.gene94097:CDS
CCTTTAGAAATAGTTTGACC+AGG 0.531392 5.4:-46543221 None:intergenic
CAAGAGCAGAACGGTTGGCA+AGG 0.532403 5.4:+46545837 MS.gene94097:CDS
TACGAGGGAGAGTTCAAGTC+GGG 0.538370 5.4:+46542615 MS.gene94097:CDS
TGATGCTTAATTTGCAATTG+GGG 0.539251 5.4:+46543261 MS.gene94097:CDS
TTCAAGTCGGGTCGAATGGA+AGG 0.541704 5.4:+46542627 MS.gene94097:CDS
GGAACATTCGTTGGATCCGA+CGG 0.543679 5.4:+46542654 MS.gene94097:CDS
TGGACAAGGTTTCCGAGTGA+AGG 0.546695 5.4:+46543454 MS.gene94097:CDS
CAGATCAAGGTCTTTGAGGG+TGG 0.547100 5.4:-46544561 None:intergenic
CTTTCCTCTCCCGGGAAAAG+CGG 0.547869 5.4:+46543805 MS.gene94097:CDS
AGCTTCACGGTGGTTTCCGA+TGG 0.550449 5.4:+46542414 MS.gene94097:CDS
TTCTACCTCCGCCTTGTGAA+CGG 0.551236 5.4:-46542377 None:intergenic
ATTATATGTTGGCTATATGT+GGG 0.552492 5.4:+46543764 MS.gene94097:CDS
GCAACGTACCGAATGGATCC+GGG 0.560372 5.4:+46542496 MS.gene94097:CDS
GGAAACGTGGAAAAGCTTCA+GGG 0.560933 5.4:+46542559 MS.gene94097:CDS
TCTCCCACAAACCCTCCAAA+CGG 0.561965 5.4:-46542887 None:intergenic
ATTTGTATTTGGGAATCTGA+AGG 0.563741 5.4:+46543068 MS.gene94097:CDS
TGTTGTCATCACGAAAATGA+AGG 0.564482 5.4:-46544803 None:intergenic
TTATGTGTAGATACACGGTT+GGG 0.565022 5.4:+46543371 MS.gene94097:intron
TTTGATCAATACACCAATGG+TGG 0.566117 5.4:+46545869 MS.gene94097:CDS
TGGGAATCTGAAGGTGAAGC+TGG 0.566561 5.4:+46543077 MS.gene94097:CDS
ATAGCCAACATATAATCAGC+AGG 0.569375 5.4:-46543757 None:intergenic
GAAACACATAGTTCAGATCA+AGG 0.569553 5.4:-46544574 None:intergenic
CTAAGGAGAAGTTCTGGACA+AGG 0.572481 5.4:+46543440 MS.gene94097:CDS
TCCTTAGGATCAAAATCACT+AGG 0.573231 5.4:-46543424 None:intergenic
GCCAGCAAGAGCAGAACGGT+TGG 0.576008 5.4:+46545832 MS.gene94097:CDS
AGTGAAGAAATCTGAAGTCA+AGG 0.576419 5.4:+46543873 MS.gene94097:CDS
AGTGACACCGACGAGCTTCA+CGG 0.578015 5.4:+46542401 MS.gene94097:CDS
TTCTCCGGCAACGTACCGAA+TGG 0.579587 5.4:+46542489 MS.gene94097:CDS
CGAAACTCCGCGGTTTGATG+AGG 0.581720 5.4:-46543493 None:intergenic
TCGATGGAAAGATTACTGTC+CGG 0.582178 5.4:+46543513 MS.gene94097:CDS
CCGGCATAGAAATCTCCGTT+CGG 0.582234 5.4:-46542462 None:intergenic
GCCTTCAGGCGCGACTTACG+AGG 0.585744 5.4:+46542599 MS.gene94097:CDS
TGGGAGAATGGTGTTCCGAA+AGG 0.586485 5.4:+46542903 MS.gene94097:CDS
GGTTAACGGAAACCGTTTGG+AGG 0.586593 5.4:+46542875 MS.gene94097:CDS
GTGTTCCAGACAAATTGAGC+GGG 0.588866 5.4:+46544728 MS.gene94097:intron
AGAAAATCATTAATCAGGCT+AGG 0.589168 5.4:+46545800 MS.gene94097:intron
GTTATGTGTAGATACACGGT+TGG 0.590677 5.4:+46543370 MS.gene94097:intron
GTCCAAATATGAGAATTCAC+TGG 0.592833 5.4:+46544273 MS.gene94097:CDS
CTCAACAACGGATCTACCAT+CGG 0.594963 5.4:-46542430 None:intergenic
TGATCCTGCTGATTATATGT+TGG 0.603422 5.4:+46543753 MS.gene94097:CDS
GGAAAACAAACCTTCTCCAC+CGG 0.604991 5.4:+46542335 MS.gene94097:CDS
AATGGTGTTCCGAAAGGACA+AGG 0.606673 5.4:+46542909 MS.gene94097:CDS
GTTAACGGAAACCGTTTGGA+GGG 0.607741 5.4:+46542876 MS.gene94097:CDS
GGAATGAGTATGTTGGTGAA+TGG 0.608130 5.4:+46542814 MS.gene94097:CDS
GTGTAGATACACGGTTGGGA+AGG 0.610224 5.4:+46543375 MS.gene94097:intron
AGAAGCCGTTCACAAGGCGG+AGG 0.613179 5.4:+46542372 MS.gene94097:CDS
TATGTTGGTGAATGGCGTAA+CGG 0.613312 5.4:+46542822 MS.gene94097:CDS
AAGAATGGGAATGAGTATGT+TGG 0.613469 5.4:+46542807 MS.gene94097:CDS
ATACTACTGTTAGTGGTAGA+GGG 0.613626 5.4:+46543018 MS.gene94097:CDS
GAGCAGAACGGTTGGCAAGG+AGG 0.613970 5.4:+46545840 MS.gene94097:CDS
GGTCAGAAACGTTACGCGAA+CGG 0.615476 5.4:+46542723 MS.gene94097:CDS
ACTGGTGACAAAATTCTTTG+GGG 0.617270 5.4:+46544291 MS.gene94097:CDS
CTTCCAGCAATCACCGCCGG+TGG 0.622524 5.4:-46542351 None:intergenic
GTAATCTTGGATCCTTCACT+CGG 0.623506 5.4:-46543466 None:intergenic
CTTCTTCCAGCAATCACCGC+CGG 0.623571 5.4:-46542354 None:intergenic
CTCCGCGGTTTGATGAGGCG+GGG 0.626199 5.4:-46543488 None:intergenic
ACAACACTTATGACAAAATG+GGG 0.628764 5.4:+46544820 MS.gene94097:CDS
TGATATTGTTGATAATGTCG+AGG 0.629658 5.4:+46543112 MS.gene94097:CDS
GCTGGAAGAAGCCGTTCACA+AGG 0.630714 5.4:+46542366 MS.gene94097:CDS
TGGAAGCGTAACGTTCAAGA+TGG 0.631023 5.4:+46542765 MS.gene94097:CDS
GAACGTTTCCTCATCAACAC+AGG 0.631655 5.4:-46542987 None:intergenic
GCGAACGGTGATTTATACGA+AGG 0.632599 5.4:+46542738 MS.gene94097:CDS
GGGATCGAGTTAAATCTGGA+AGG 0.635478 5.4:+46545024 MS.gene94097:CDS
GATTTGAAAGGATCTTCACA+TGG 0.636840 5.4:+46544497 MS.gene94097:CDS
CCTTCAGGCGCGACTTACGA+GGG 0.638477 5.4:+46542600 MS.gene94097:CDS
TGGAGCTCCGATAGAAAACA+CGG 0.638988 5.4:+46542696 MS.gene94097:CDS
CATTTGAATCCTTATAGCAG+CGG 0.641163 5.4:+46545899 MS.gene94097:CDS
AACGGCGTTATATCTGGTAA+GGG 0.645119 5.4:+46542840 MS.gene94097:CDS
CATTGTGTGAAACCTATTGG+AGG 0.647839 5.4:+46544316 MS.gene94097:CDS
AACGTTTCCTCATCAACACA+GGG 0.651828 5.4:-46542986 None:intergenic
TCATGTTATGTGTAGATACA+CGG 0.652727 5.4:+46543366 MS.gene94097:intron
GGTGAACGATGAAGTTGTTG+AGG 0.655019 5.4:+46542272 MS.gene94097:CDS
GAAACCACCGTGAAGCTCGT+CGG 0.655705 5.4:-46542408 None:intergenic
CGTAACGTTCAAGATGGTCA+AGG 0.657499 5.4:+46542771 MS.gene94097:CDS
TTCGAAAATGAGTGATACAG+TGG 0.660445 5.4:+46542251 None:intergenic
ACGGTGATTTATACGAAGGG+TGG 0.664730 5.4:+46542742 MS.gene94097:CDS
GTTGAGAGAGTACTTCCGAA+CGG 0.664758 5.4:+46542447 MS.gene94097:CDS
TGTACAACGAAATTGGTACC+AGG 0.667243 5.4:+46544598 MS.gene94097:CDS
AAACAAACCTTCTCCACCGG+CGG 0.669189 5.4:+46542338 MS.gene94097:CDS
GGGAAGTATCTATGGACCGA+CGG 0.669212 5.4:+46542516 MS.gene94097:CDS
CCGACGGTGATACATATCGC+GGG 0.670057 5.4:+46542670 MS.gene94097:CDS
CGAACGGTGATTTATACGAA+GGG 0.671404 5.4:+46542739 MS.gene94097:CDS
TGTGTTCCAGACAAATTGAG+CGG 0.672020 5.4:+46544727 MS.gene94097:intron
CCCGCGATATGTATCACCGT+CGG 0.676716 5.4:-46542670 None:intergenic
CATACTGAGAAGTTCATGCG+TGG 0.677957 5.4:+46544969 MS.gene94097:CDS
GAATCCTTATAGCAGCGGGG+AGG 0.683149 5.4:+46545904 MS.gene94097:CDS
GGAAGAAGCCGTTCACAAGG+CGG 0.683363 5.4:+46542369 MS.gene94097:CDS
TCCGACGGTGATACATATCG+CGG 0.684537 5.4:+46542669 MS.gene94097:CDS
TTATATGTTGGCTATATGTG+GGG 0.684561 5.4:+46543765 MS.gene94097:CDS
ACCTCAGAAGAGAAACAACA+AGG 0.687681 5.4:-46543191 None:intergenic
ATCTTTCCATCGAAACTCCG+CGG 0.690643 5.4:-46543503 None:intergenic
ACCTTCGTACATGCAACCGT+CGG 0.692042 5.4:-46542532 None:intergenic
ATATGCCAGCAAGAGCAGAA+CGG 0.698498 5.4:+46545828 MS.gene94097:CDS
GGTGTTATGAAGATTCAACA+TGG 0.703414 5.4:+46542930 MS.gene94097:CDS
CGGAAGTACTCTCTCAACAA+CGG 0.711881 5.4:-46542442 None:intergenic
TTACGAGGGAGAGTTCAAGT+CGG 0.724697 5.4:+46542614 MS.gene94097:CDS
TACGAAGGTGAATGGAAACG+TGG 0.729766 5.4:+46542546 MS.gene94097:CDS
GGAGCTCCGATAGAAAACAC+GGG 0.731752 5.4:+46542697 MS.gene94097:CDS
ACCGACGGTTGCATGTACGA+AGG 0.732846 5.4:+46542531 MS.gene94097:CDS
TTTGAATCCTTATAGCAGCG+GGG 0.739961 5.4:+46545901 MS.gene94097:CDS
TACCCCGCCTCATCAAACCG+CGG 0.741865 5.4:+46543486 MS.gene94097:CDS
TCGTGCAACAGATAAACCTG+AGG 0.756825 5.4:+46544520 MS.gene94097:CDS
GACACCGACGAGCTTCACGG+TGG 0.776234 5.4:+46542404 MS.gene94097:CDS
ACGTTTCCTCATCAACACAG+GGG 0.812629 5.4:-46542985 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTAAATTAAAATTCTTTAT+TGG + chr5.4:46545354-46545373 MS.gene94097:intron 10.0%
!!! TTTAGATTTAATTTATCAAA+TGG + chr5.4:46545096-46545115 MS.gene94097:intron 10.0%
!!! TTTGATTTCTAATATATTTT+TGG + chr5.4:46545521-46545540 MS.gene94097:intron 10.0%
!!! TAAAGAATTTTAATTTAAGC+CGG - chr5.4:46545353-46545372 None:intergenic 15.0%
!!! TATTTTTTTTCTTTCTTTCT+AGG + chr5.4:46544651-46544670 MS.gene94097:intron 15.0%
!! ACAATAACAATAACAAAACA+AGG - chr5.4:46543305-46543324 None:intergenic 20.0%
!! CAATAACAATAACAAAACAA+GGG - chr5.4:46543304-46543323 None:intergenic 20.0%
!! TGTAATCTTGAGATATATTA+GGG + chr5.4:46545226-46545245 MS.gene94097:intron 20.0%
!! TTCTTTATTGGCATTAAAAT+TGG + chr5.4:46545366-46545385 MS.gene94097:intron 20.0%
!! TTGTAATCTTGAGATATATT+AGG + chr5.4:46545225-46545244 MS.gene94097:intron 20.0%
!!! ATTTAATTTATCAAATGGCT+GGG + chr5.4:46545101-46545120 MS.gene94097:intron 20.0%
!!! TAAATAATCATTTTTCCACA+TGG - chr5.4:46543997-46544016 None:intergenic 20.0%
!!! TTGTTTTAATGTTGATGTTT+TGG + chr5.4:46543586-46543605 MS.gene94097:intron 20.0%
! AAACTTACTTAATAAGATCC+TGG - chr5.4:46544619-46544638 None:intergenic 25.0%
! AAATCAAATCGTCTATGAAT+TGG - chr5.4:46544482-46544501 None:intergenic 25.0%
! ATCTCTTGAAAATATCAGAA+AGG + chr5.4:46545301-46545320 MS.gene94097:intron 25.0%
! ATTATGTTGGCAAATTAAGT+GGG + chr5.4:46545430-46545449 MS.gene94097:intron 25.0%
! CAATCAATGAATTTATTGTC+AGG - chr5.4:46545547-46545566 None:intergenic 25.0%
! GAAGAATATTCATTGAAGAT+TGG + chr5.4:46546086-46546105 MS.gene94097:CDS 25.0%
! GATATATTATTGTAGCTGTA+TGG + chr5.4:46544359-46544378 MS.gene94097:intron 25.0%
! TCAACAATCTTTAACAGTTT+AGG - chr5.4:46545714-46545733 None:intergenic 25.0%
! TCTTCAGAAAATCATTAATC+AGG + chr5.4:46545795-46545814 MS.gene94097:intron 25.0%
! TTCCTTAAAATTAGTGTAGA+TGG + chr5.4:46545067-46545086 MS.gene94097:intron 25.0%
!! ATCCATCTACACTAATTTTA+AGG - chr5.4:46545072-46545091 None:intergenic 25.0%
!! ATGATTGCGTTCTATATTTT+GGG + chr5.4:46545930-46545949 MS.gene94097:CDS 25.0%
!! ATTATATGTTGGCTATATGT+GGG + chr5.4:46543764-46543783 MS.gene94097:CDS 25.0%
!! ATTTTCCTAGGATTTGTATT+TGG + chr5.4:46543057-46543076 MS.gene94097:CDS 25.0%
!! GATTTAATTTATCAAATGGC+TGG + chr5.4:46545100-46545119 MS.gene94097:intron 25.0%
!! TAAAAGATTTCAACTGATTC+AGG - chr5.4:46545179-46545198 None:intergenic 25.0%
!! TATGATTGCGTTCTATATTT+TGG + chr5.4:46545929-46545948 MS.gene94097:CDS 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG + chr5.4:46543058-46543077 MS.gene94097:CDS 25.0%
!!! TTGATGCTTAATTTGCAATT+GGG + chr5.4:46543260-46543279 MS.gene94097:CDS 25.0%
!!! TTTGATGCTTAATTTGCAAT+TGG + chr5.4:46543259-46543278 MS.gene94097:CDS 25.0%
AAAGAACATGAATGCAAAGA+AGG - chr5.4:46545589-46545608 None:intergenic 30.0%
AATACGTATCTGACAAGTTA+TGG + chr5.4:46544701-46544720 MS.gene94097:intron 30.0%
AATCATGAATCTGTCATCTT+GGG - chr5.4:46543848-46543867 None:intergenic 30.0%
ACAACACTTATGACAAAATG+GGG + chr5.4:46544820-46544839 MS.gene94097:CDS 30.0%
ACCTGTGTTGAAATTAATTC+GGG + chr5.4:46543616-46543635 MS.gene94097:intron 30.0%
AGAAAATCATTAATCAGGCT+AGG + chr5.4:46545800-46545819 MS.gene94097:intron 30.0%
ATCAGAAAGGAATAAGTTGT+AGG + chr5.4:46545314-46545333 MS.gene94097:intron 30.0%
ATCCAAAGCTATACTCAAAA+AGG + chr5.4:46546047-46546066 MS.gene94097:CDS 30.0%
ATTTGTATTTGGGAATCTGA+AGG + chr5.4:46543068-46543087 MS.gene94097:CDS 30.0%
CATTATGTTGGCAAATTAAG+TGG + chr5.4:46545429-46545448 MS.gene94097:intron 30.0%
CTGAAATTGTTGTCTGTATA+TGG - chr5.4:46545630-46545649 None:intergenic 30.0%
CTTAATACATGTCACGAAAT+TGG - chr5.4:46545762-46545781 None:intergenic 30.0%
CTTGGAAAACGAGAAAATTA+TGG + chr5.4:46544761-46544780 MS.gene94097:CDS 30.0%
GACAACACTTATGACAAAAT+GGG + chr5.4:46544819-46544838 MS.gene94097:CDS 30.0%
GACCTGTGTTGAAATTAATT+CGG + chr5.4:46543615-46543634 MS.gene94097:intron 30.0%
GAGTTATACCTAAAAACAAC+CGG - chr5.4:46543535-46543554 None:intergenic 30.0%
GTTGTCTGTATATGGTATAT+GGG - chr5.4:46545622-46545641 None:intergenic 30.0%
TAAGAACAAAACATACCATG+TGG + chr5.4:46543979-46543998 MS.gene94097:intron 30.0%
TAATCATGAATCTGTCATCT+TGG - chr5.4:46543849-46543868 None:intergenic 30.0%
TCATGTTATGTGTAGATACA+CGG + chr5.4:46543366-46543385 MS.gene94097:intron 30.0%
TCCAATAACAATGAAAAGTC+AGG - chr5.4:46544410-46544429 None:intergenic 30.0%
TGACAACACTTATGACAAAA+TGG + chr5.4:46544818-46544837 MS.gene94097:CDS 30.0%
TGTTATTGGAAAATCAGATC+CGG + chr5.4:46544420-46544439 MS.gene94097:intron 30.0%
TGTTGTCTGTATATGGTATA+TGG - chr5.4:46545623-46545642 None:intergenic 30.0%
TTTCGTGACATGTATTAAGT+AGG + chr5.4:46545763-46545782 MS.gene94097:intron 30.0%
TTTGATTCTTCAGACATTTG+AGG + chr5.4:46543716-46543735 MS.gene94097:intron 30.0%
! AAAAGGTTTCGAGATTTTGT+TGG + chr5.4:46546064-46546083 MS.gene94097:CDS 30.0%
! ATGAAGATTCAACATGGTTT+TGG + chr5.4:46542936-46542955 MS.gene94097:CDS 30.0%
! ATTTCTGACTTCCAACTTTT+AGG + chr5.4:46544213-46544232 MS.gene94097:intron 30.0%
! GATTATATGTTGGCTATATG+TGG + chr5.4:46543763-46543782 MS.gene94097:CDS 30.0%
! GTAAGTAGTTTGCATTATGT+TGG + chr5.4:46545417-46545436 MS.gene94097:intron 30.0%
! TGAAATTAATTCGGGTGTTT+TGG + chr5.4:46543624-46543643 MS.gene94097:intron 30.0%
! TGAATGAGAAGAATTTTCCT+AGG + chr5.4:46543045-46543064 MS.gene94097:CDS 30.0%
! TGATTGCGTTCTATATTTTG+GGG + chr5.4:46545931-46545950 MS.gene94097:CDS 30.0%
! TTATATGTTGGCTATATGTG+GGG + chr5.4:46543765-46543784 MS.gene94097:CDS 30.0%
!! AAGCTTTTCCAATTTAGCTT+TGG - chr5.4:46545145-46545164 None:intergenic 30.0%
!! AATTATGGACTACAGTCTTT+TGG + chr5.4:46544776-46544795 MS.gene94097:CDS 30.0%
!! CATAGACGATTTGATTTGAA+AGG + chr5.4:46544485-46544504 MS.gene94097:CDS 30.0%
!! CTGGTCAAACTATTTCTAAA+GGG + chr5.4:46543222-46543241 MS.gene94097:CDS 30.0%
!! GATTTTGATCAATACACCAA+TGG + chr5.4:46545866-46545885 MS.gene94097:CDS 30.0%
!! GTGTCTTGTTGAATTTTACA+CGG + chr5.4:46543933-46543952 MS.gene94097:intron 30.0%
!! TGATATTGTTGATAATGTCG+AGG + chr5.4:46543112-46543131 MS.gene94097:CDS 30.0%
!! TGATGCTTAATTTGCAATTG+GGG + chr5.4:46543261-46543280 MS.gene94097:CDS 30.0%
!! TGTCTTGTTGAATTTTACAC+GGG + chr5.4:46543934-46543953 MS.gene94097:intron 30.0%
!! TTAATTTGCAATTGGGGATT+AGG + chr5.4:46543267-46543286 MS.gene94097:CDS 30.0%
!!! AACCTTTTTGAGTATAGCTT+TGG - chr5.4:46546052-46546071 None:intergenic 30.0%
!!! GTTTTGGATGATTTTTGGTT+TGG + chr5.4:46543640-46543659 MS.gene94097:intron 30.0%
!!! TTAATGTTGATGTTTTGGTG+AGG + chr5.4:46543591-46543610 MS.gene94097:intron 30.0%
AACACTCACTATAGAGCATA+TGG + chr5.4:46544878-46544897 MS.gene94097:intron 35.0%
AAGAATCCTGATTGCCTAAA+AGG - chr5.4:46544947-46544966 None:intergenic 35.0%
AAGAATGGGAATGAGTATGT+TGG + chr5.4:46542807-46542826 MS.gene94097:CDS 35.0%
ACCCGAATTAATTTCAACAC+AGG - chr5.4:46543620-46543639 None:intergenic 35.0%
ACTGGTGACAAAATTCTTTG+GGG + chr5.4:46544291-46544310 MS.gene94097:CDS 35.0%
ACTTGCAACCAAAGCTAAAT+TGG + chr5.4:46545134-46545153 MS.gene94097:intron 35.0%
AGAATCCTGATTGCCTAAAA+GGG - chr5.4:46544946-46544965 None:intergenic 35.0%
AGCTAAATTGGAAAAGCTTC+AGG + chr5.4:46545146-46545165 MS.gene94097:intron 35.0%
ATACTACTGTTAGTGGTAGA+GGG + chr5.4:46543018-46543037 MS.gene94097:CDS 35.0%
ATAGCCAACATATAATCAGC+AGG - chr5.4:46543760-46543779 None:intergenic 35.0%
ATTTGAATCCTTATAGCAGC+GGG + chr5.4:46545900-46545919 MS.gene94097:CDS 35.0%
CACCAGTGAATTCTCATATT+TGG - chr5.4:46544278-46544297 None:intergenic 35.0%
CACTATAGAGCATATGGTTA+TGG + chr5.4:46544884-46544903 MS.gene94097:intron 35.0%
CACTGGTGACAAAATTCTTT+GGG + chr5.4:46544290-46544309 MS.gene94097:CDS 35.0%
CATTTGAATCCTTATAGCAG+CGG + chr5.4:46545899-46545918 MS.gene94097:CDS 35.0%
CGTATTCTATAACGATTCAC+TGG - chr5.4:46544687-46544706 None:intergenic 35.0%
CTAAATTGGAAAAGCTTCAG+GGG + chr5.4:46545148-46545167 MS.gene94097:intron 35.0%
CTTACAAAACCTAAGTTGTC+TGG - chr5.4:46544070-46544089 None:intergenic 35.0%
GAAACACATAGTTCAGATCA+AGG - chr5.4:46544577-46544596 None:intergenic 35.0%
GATTCCCAAATACAAATCCT+AGG - chr5.4:46543065-46543084 None:intergenic 35.0%
GATTTGAAAGGATCTTCACA+TGG + chr5.4:46544497-46544516 MS.gene94097:CDS 35.0%
GCTAAATTGGAAAAGCTTCA+GGG + chr5.4:46545147-46545166 MS.gene94097:intron 35.0%
GGTAAGAATCTACGTTTAAC+CGG - chr5.4:46544128-46544147 None:intergenic 35.0%
GTAAGAATCTACGTTTAACC+GGG - chr5.4:46544127-46544146 None:intergenic 35.0%
GTACATTGTGTGAAACCTAT+TGG + chr5.4:46544313-46544332 MS.gene94097:CDS 35.0%
GTCCAAATATGAGAATTCAC+TGG + chr5.4:46544273-46544292 MS.gene94097:CDS 35.0%
GTTACGCAATTACAAGTCTT+TGG + chr5.4:46544161-46544180 MS.gene94097:intron 35.0%
TCACTGGTGACAAAATTCTT+TGG + chr5.4:46544289-46544308 MS.gene94097:CDS 35.0%
TCCTTAGGATCAAAATCACT+AGG - chr5.4:46543427-46543446 None:intergenic 35.0%
TCTGTTGATACTACTGTTAG+TGG + chr5.4:46543011-46543030 MS.gene94097:CDS 35.0%
TGCAGGAAATAGTTGTTTGT+GGG + chr5.4:46545461-46545480 MS.gene94097:intron 35.0%
TGTTGTCATCACGAAAATGA+AGG - chr5.4:46544806-46544825 None:intergenic 35.0%
TGTTTCGTGTACAACGAAAT+TGG + chr5.4:46544591-46544610 MS.gene94097:CDS 35.0%
TTATGTGTAGATACACGGTT+GGG + chr5.4:46543371-46543390 MS.gene94097:intron 35.0%
TTCATAACACCTTGTCCTTT+CGG - chr5.4:46542921-46542940 None:intergenic 35.0%
TTGCAGGAAATAGTTGTTTG+TGG + chr5.4:46545460-46545479 MS.gene94097:intron 35.0%
TTTGATCAATACACCAATGG+TGG + chr5.4:46545869-46545888 MS.gene94097:CDS 35.0%
! AGTGAAGAAATCTGAAGTCA+AGG + chr5.4:46543873-46543892 MS.gene94097:CDS 35.0%
! ATCTATCGATCCATACCTTT+TGG - chr5.4:46544342-46544361 None:intergenic 35.0%
! CCTTTAGAAATAGTTTGACC+AGG - chr5.4:46543224-46543243 None:intergenic 35.0%
! GCCTGACTTTTCATTGTTAT+TGG + chr5.4:46544406-46544425 MS.gene94097:intron 35.0%
! GGTGTTATGAAGATTCAACA+TGG + chr5.4:46542930-46542949 MS.gene94097:CDS 35.0%
! GTTGAATTTTACACGGGTTT+GGG + chr5.4:46543940-46543959 MS.gene94097:intron 35.0%
! TGATCCTGCTGATTATATGT+TGG + chr5.4:46543753-46543772 MS.gene94097:CDS 35.0%
! TGCGTAACTTGCGTTATAAA+AGG - chr5.4:46544149-46544168 None:intergenic 35.0%
! TGGGGTTATCGATATTTTAC+AGG + chr5.4:46545949-46545968 MS.gene94097:CDS 35.0%
! TGTTGAATTTTACACGGGTT+TGG + chr5.4:46543939-46543958 MS.gene94097:intron 35.0%
!! ACAACTTAGGTTTTGTAAGG+AGG + chr5.4:46544071-46544090 MS.gene94097:intron 35.0%
!! ACCTAGTGATTTTGATCCTA+AGG + chr5.4:46543423-46543442 MS.gene94097:CDS 35.0%
!! CAGACAACTTAGGTTTTGTA+AGG + chr5.4:46544068-46544087 MS.gene94097:intron 35.0%
!! CCTGGTCAAACTATTTCTAA+AGG + chr5.4:46543221-46543240 MS.gene94097:CDS 35.0%
!! TTAAGTGGGTATAGTTTTGC+AGG + chr5.4:46545444-46545463 MS.gene94097:intron 35.0%
!!! AAGATTCAACATGGTTTTGG+TGG + chr5.4:46542939-46542958 MS.gene94097:CDS 35.0%
!!! AGATTCAACATGGTTTTGGT+GGG + chr5.4:46542940-46542959 MS.gene94097:CDS 35.0%
!!! ATTACTGTCCGGTTGTTTTT+AGG + chr5.4:46543524-46543543 MS.gene94097:CDS 35.0%
AACAATGAAAAGTCAGGCAC+AGG - chr5.4:46544404-46544423 None:intergenic 40.0%
AACGGCGTTATATCTGGTAA+GGG + chr5.4:46542840-46542859 MS.gene94097:CDS 40.0%
AACGTTTCCTCATCAACACA+GGG - chr5.4:46542989-46543008 None:intergenic 40.0%
ACAATGAAAAGTCAGGCACA+GGG - chr5.4:46544403-46544422 None:intergenic 40.0%
ACCTCAGAAGAGAAACAACA+AGG - chr5.4:46543194-46543213 None:intergenic 40.0%
AGTTCAGATCAAGGTCTTTG+AGG - chr5.4:46544568-46544587 None:intergenic 40.0%
ATACCAGTGCGTAGAAGAAA+AGG - chr5.4:46544852-46544871 None:intergenic 40.0%
CAGATCCGGTTTATTGTGAT+GGG + chr5.4:46544434-46544453 MS.gene94097:intron 40.0%
CATTGTGTGAAACCTATTGG+AGG + chr5.4:46544316-46544335 MS.gene94097:CDS 40.0%
CGAACGGTGATTTATACGAA+GGG + chr5.4:46542739-46542758 MS.gene94097:CDS 40.0%
CGATTTGACTAACAGTTGAC+TGG - chr5.4:46544039-46544058 None:intergenic 40.0%
CGCTGCTATAAGGATTCAAA+TGG - chr5.4:46545901-46545920 None:intergenic 40.0%
GAATCCTGATTGCCTAAAAG+GGG - chr5.4:46544945-46544964 None:intergenic 40.0%
GACGTTACGTTTGGAAGAAT+GGG + chr5.4:46542793-46542812 MS.gene94097:CDS 40.0%
GATACTACTGTTAGTGGTAG+AGG + chr5.4:46543017-46543036 MS.gene94097:CDS 40.0%
GATAGGGATCGAGTTAAATC+TGG + chr5.4:46545020-46545039 MS.gene94097:CDS 40.0%
GATTGCCCATCACAATAAAC+CGG - chr5.4:46544442-46544461 None:intergenic 40.0%
GTAATCTTGGATCCTTCACT+CGG - chr5.4:46543469-46543488 None:intergenic 40.0%
GTTAGTAGACCAGACAACTT+AGG + chr5.4:46544058-46544077 MS.gene94097:intron 40.0%
GTTATGTGTAGATACACGGT+TGG + chr5.4:46543370-46543389 MS.gene94097:intron 40.0%
GTTCAGATCAAGGTCTTTGA+GGG - chr5.4:46544567-46544586 None:intergenic 40.0%
GTTTCATCAATCTCATCCTC+AGG - chr5.4:46544539-46544558 None:intergenic 40.0%
TAACGGCGTTATATCTGGTA+AGG + chr5.4:46542839-46542858 MS.gene94097:CDS 40.0%
TATATTAGGGCTTGTGCTGT+TGG + chr5.4:46545239-46545258 MS.gene94097:intron 40.0%
TCAGATCCGGTTTATTGTGA+TGG + chr5.4:46544433-46544452 MS.gene94097:intron 40.0%
TCGATGGAAAGATTACTGTC+CGG + chr5.4:46543513-46543532 MS.gene94097:CDS 40.0%
TGTACAACGAAATTGGTACC+AGG + chr5.4:46544598-46544617 MS.gene94097:CDS 40.0%
TGTGTTCCAGACAAATTGAG+CGG + chr5.4:46544727-46544746 MS.gene94097:intron 40.0%
TTGATCCTAAGGAGAAGTTC+TGG + chr5.4:46543434-46543453 MS.gene94097:CDS 40.0%
TTGTCGCTATTCGAATATCC+CGG + chr5.4:46544106-46544125 MS.gene94097:intron 40.0%
TTTCTGTTACTCTGTGTGTG+TGG + chr5.4:46545651-46545670 MS.gene94097:intron 40.0%
TTTGAATCCTTATAGCAGCG+GGG + chr5.4:46545901-46545920 MS.gene94097:CDS 40.0%
! ACATTTGAGGAAGCTGTTTC+AGG + chr5.4:46543729-46543748 MS.gene94097:CDS 40.0%
! CAGGGAAAGGGAAATTTTCA+TGG + chr5.4:46542577-46542596 MS.gene94097:CDS 40.0%
! GCGATATTCTTTCCCCTTTT+AGG + chr5.4:46544930-46544949 MS.gene94097:intron 40.0%
! GCTTCTATGTTTTATCGCGA+TGG + chr5.4:46543134-46543153 MS.gene94097:CDS 40.0%
! GGAATGAGTATGTTGGTGAA+TGG + chr5.4:46542814-46542833 MS.gene94097:CDS 40.0%
! GGTTCGTTAGTTTGGGTTAA+CGG + chr5.4:46542861-46542880 MS.gene94097:CDS 40.0%
! TATGTTGGTGAATGGCGTAA+CGG + chr5.4:46542822-46542841 MS.gene94097:CDS 40.0%
! TGGTAAGGGTTCGTTAGTTT+GGG + chr5.4:46542854-46542873 MS.gene94097:CDS 40.0%
!! ATGGACTACAGTCTTTTGGT+TGG + chr5.4:46544780-46544799 MS.gene94097:CDS 40.0%
!! CCAACTTTTAGGTGCTTCTT+CGG + chr5.4:46544224-46544243 MS.gene94097:intron 40.0%
!! CGGGTGTTTTGGATGATTTT+TGG + chr5.4:46543635-46543654 MS.gene94097:intron 40.0%
!! GAAGGTTTGTTTTCCTTCTC+CGG - chr5.4:46542330-46542349 None:intergenic 40.0%
!! TCCTTGTTGTTTCTCTTCTG+AGG + chr5.4:46543190-46543209 MS.gene94097:CDS 40.0%
!! TTAGGTTTTGTAAGGAGGTC+TGG + chr5.4:46544076-46544095 MS.gene94097:intron 40.0%
!!! ATGGTTTTGGTGGGTTTGTT+TGG + chr5.4:46542949-46542968 MS.gene94097:CDS 40.0%
AAACCGTTTGGAGGGTTTGT+GGG + chr5.4:46542884-46542903 MS.gene94097:CDS 45.0%
AATGGTGTTCCGAAAGGACA+AGG + chr5.4:46542909-46542928 MS.gene94097:CDS 45.0%
ACAATCCCGCTCAATTTGTC+TGG - chr5.4:46544736-46544755 None:intergenic 45.0%
ACGGTGATTTATACGAAGGG+TGG + chr5.4:46542742-46542761 MS.gene94097:CDS 45.0%
ACGTTTCCTCATCAACACAG+GGG - chr5.4:46542988-46543007 None:intergenic 45.0%
AGATACTTCCCGGATCCATT+CGG - chr5.4:46542507-46542526 None:intergenic 45.0%
ATATGCCAGCAAGAGCAGAA+CGG + chr5.4:46545828-46545847 MS.gene94097:CDS 45.0%
ATCTTTCCATCGAAACTCCG+CGG - chr5.4:46543506-46543525 None:intergenic 45.0%
ATGGTCAAGGACGTTACGTT+TGG + chr5.4:46542784-46542803 MS.gene94097:CDS 45.0%
CATACTGAGAAGTTCATGCG+TGG + chr5.4:46544969-46544988 MS.gene94097:CDS 45.0%
CGAAGCAGAGTTGCAAGATA+GGG + chr5.4:46545004-46545023 MS.gene94097:CDS 45.0%
CGTAACGTTCAAGATGGTCA+AGG + chr5.4:46542771-46542790 MS.gene94097:CDS 45.0%
CTATTGGAGGCCAAAAGGTA+TGG + chr5.4:46544329-46544348 MS.gene94097:intron 45.0%
CTCAACAACGGATCTACCAT+CGG - chr5.4:46542433-46542452 None:intergenic 45.0%
CTGGTAAGGGTTCGTTAGTT+TGG + chr5.4:46542853-46542872 MS.gene94097:CDS 45.0%
CTTAGAGAACTTTCCTCTCC+CGG + chr5.4:46543796-46543815 MS.gene94097:CDS 45.0%
CTTGTCCAGAACTTCTCCTT+AGG - chr5.4:46543442-46543461 None:intergenic 45.0%
GAAACCTATTGGAGGCCAAA+AGG + chr5.4:46544324-46544343 MS.gene94097:CDS 45.0%
GAACGTTTCCTCATCAACAC+AGG - chr5.4:46542990-46543009 None:intergenic 45.0%
GAAGAGCAACATTCCTGAAC+CGG + chr5.4:46542308-46542327 MS.gene94097:CDS 45.0%
GAAGGATTCGGAACATTCGT+TGG + chr5.4:46542645-46542664 MS.gene94097:CDS 45.0%
GCGAACGGTGATTTATACGA+AGG + chr5.4:46542738-46542757 MS.gene94097:CDS 45.0%
GGAAAACAAACCTTCTCCAC+CGG + chr5.4:46542335-46542354 MS.gene94097:CDS 45.0%
GGAAACGTGGAAAAGCTTCA+GGG + chr5.4:46542559-46542578 MS.gene94097:CDS 45.0%
GGACGTTACGTTTGGAAGAA+TGG + chr5.4:46542792-46542811 MS.gene94097:CDS 45.0%
GGATGCTTTCGAAACTCATC+AGG - chr5.4:46543173-46543192 None:intergenic 45.0%
GGGATCGAGTTAAATCTGGA+AGG + chr5.4:46545024-46545043 MS.gene94097:CDS 45.0%
GGTGAACGATGAAGTTGTTG+AGG + chr5.4:46542272-46542291 MS.gene94097:CDS 45.0%
GTGATTTATACGAAGGGTGG+TGG + chr5.4:46542745-46542764 MS.gene94097:CDS 45.0%
GTGGAAAAGCTTCAGGGAAA+GGG + chr5.4:46542565-46542584 MS.gene94097:CDS 45.0%
GTGTTCCAGACAAATTGAGC+GGG + chr5.4:46544728-46544747 MS.gene94097:intron 45.0%
GTTAACGGAAACCGTTTGGA+GGG + chr5.4:46542876-46542895 MS.gene94097:CDS 45.0%
GTTGCATGTACGAAGGTGAA+TGG + chr5.4:46542538-46542557 MS.gene94097:CDS 45.0%
TACGAAGGTGAATGGAAACG+TGG + chr5.4:46542546-46542565 MS.gene94097:CDS 45.0%
TCCGATAGAAAACACGGGTT+CGG + chr5.4:46542702-46542721 MS.gene94097:CDS 45.0%
TCGAAGCAGAGTTGCAAGAT+AGG + chr5.4:46545003-46545022 MS.gene94097:CDS 45.0%
TCGTGCAACAGATAAACCTG+AGG + chr5.4:46544520-46544539 MS.gene94097:CDS 45.0%
TGGAAACGTGGAAAAGCTTC+AGG + chr5.4:46542558-46542577 MS.gene94097:CDS 45.0%
TGGAGCTCCGATAGAAAACA+CGG + chr5.4:46542696-46542715 MS.gene94097:CDS 45.0%
TTACGAGGGAGAGTTCAAGT+CGG + chr5.4:46542614-46542633 MS.gene94097:CDS 45.0%
TTAGAGAACTTTCCTCTCCC+GGG + chr5.4:46543797-46543816 MS.gene94097:CDS 45.0%
TTCTATGCCGGAAGTTTCTC+CGG + chr5.4:46542474-46542493 MS.gene94097:CDS 45.0%
TTCTGCTCTTGCTGGCATAT+TGG - chr5.4:46545828-46545847 None:intergenic 45.0%
TTGGGTTAACGGAAACCGTT+TGG + chr5.4:46542872-46542891 MS.gene94097:CDS 45.0%
TTTAAGCCGGCATGTGTTAC+AGG - chr5.4:46545340-46545359 None:intergenic 45.0%
! ACCGAACCCGTGTTTTCTAT+CGG - chr5.4:46542706-46542725 None:intergenic 45.0%
! CAAATGGCTGATTCCACCAT+TGG - chr5.4:46545885-46545904 None:intergenic 45.0%
! CATACCTTTTGGCCTCCAAT+AGG - chr5.4:46544331-46544350 None:intergenic 45.0%
! CTTTCCCCTTTTAGGCAATC+AGG + chr5.4:46544938-46544957 MS.gene94097:intron 45.0%
! GGGAAATTTTCATGGCCTTC+AGG + chr5.4:46542585-46542604 MS.gene94097:CDS 45.0%
! TCACCTTTTCTTCTACGCAC+TGG + chr5.4:46544846-46544865 MS.gene94097:CDS 45.0%
! TGGAAGCGTAACGTTCAAGA+TGG + chr5.4:46542765-46542784 MS.gene94097:CDS 45.0%
! TTGTTTTCCTTCTCCGGTTC+AGG - chr5.4:46542324-46542343 None:intergenic 45.0%
!! AAAACACTTCCGCTTTTCCC+GGG - chr5.4:46543817-46543836 None:intergenic 45.0%
!! ATGGATCCGGGAAGTATCTA+TGG + chr5.4:46542508-46542527 MS.gene94097:CDS 45.0%
!! ATTTTGCCCCTGTGTTGATG+AGG + chr5.4:46542979-46542998 MS.gene94097:CDS 45.0%
!! CCGAAGAAGCACCTAAAAGT+TGG - chr5.4:46544227-46544246 None:intergenic 45.0%
!! CGGAAGTACTCTCTCAACAA+CGG - chr5.4:46542445-46542464 None:intergenic 45.0%
!! CTAAGGAGAAGTTCTGGACA+AGG + chr5.4:46543440-46543459 MS.gene94097:CDS 45.0%
!! GAAAACACTTCCGCTTTTCC+CGG - chr5.4:46543818-46543837 None:intergenic 45.0%
!! GTTGAGAGAGTACTTCCGAA+CGG + chr5.4:46542447-46542466 MS.gene94097:CDS 45.0%
!! TCTTCTGAGGTTAAGAGACC+TGG + chr5.4:46543203-46543222 MS.gene94097:CDS 45.0%
AAACAAACCTTCTCCACCGG+CGG + chr5.4:46542338-46542357 MS.gene94097:CDS 50.0%
AAGTCAGGCACAGGGAAACA+TGG - chr5.4:46544395-46544414 None:intergenic 50.0%
ACCTTCGTACATGCAACCGT+CGG - chr5.4:46542535-46542554 None:intergenic 50.0%
AGAGTTCAAGTCGGGTCGAA+TGG + chr5.4:46542623-46542642 MS.gene94097:CDS 50.0%
AGTCAGGCACAGGGAAACAT+GGG - chr5.4:46544394-46544413 None:intergenic 50.0%
ATCAAACCGCGGAGTTTCGA+TGG + chr5.4:46543497-46543516 MS.gene94097:CDS 50.0%
CAACATTCCTGAACCGGAGA+AGG + chr5.4:46542314-46542333 MS.gene94097:CDS 50.0%
CCGAACGGAGATTTCTATGC+CGG + chr5.4:46542462-46542481 MS.gene94097:CDS 50.0%
CCGGCATAGAAATCTCCGTT+CGG - chr5.4:46542465-46542484 None:intergenic 50.0%
CGTGGAAAAGCTTCAGGGAA+AGG + chr5.4:46542564-46542583 MS.gene94097:CDS 50.0%
GAAACCGTTTGGAGGGTTTG+TGG + chr5.4:46542883-46542902 MS.gene94097:CDS 50.0%
GGAACATTCGTTGGATCCGA+CGG + chr5.4:46542654-46542673 MS.gene94097:CDS 50.0%
GGAGCTCCGATAGAAAACAC+GGG + chr5.4:46542697-46542716 MS.gene94097:CDS 50.0%
GGTCAGAAACGTTACGCGAA+CGG + chr5.4:46542723-46542742 MS.gene94097:CDS 50.0%
GGTTAACGGAAACCGTTTGG+AGG + chr5.4:46542875-46542894 MS.gene94097:CDS 50.0%
GTCGGTCCATAGATACTTCC+CGG - chr5.4:46542517-46542536 None:intergenic 50.0%
GTGATACATATCGCGGGTCA+TGG + chr5.4:46542676-46542695 MS.gene94097:CDS 50.0%
GTGTAGATACACGGTTGGGA+AGG + chr5.4:46543375-46543394 MS.gene94097:intron 50.0%
TACGAGGGAGAGTTCAAGTC+GGG + chr5.4:46542615-46542634 MS.gene94097:CDS 50.0%
TACGTTGCCGGAGAAACTTC+CGG - chr5.4:46542484-46542503 None:intergenic 50.0%
TCCGACGGTGATACATATCG+CGG + chr5.4:46542669-46542688 MS.gene94097:CDS 50.0%
TCGGGTCGAATGGAAGGATT+CGG + chr5.4:46542633-46542652 MS.gene94097:CDS 50.0%
TCTCCCACAAACCCTCCAAA+CGG - chr5.4:46542890-46542909 None:intergenic 50.0%
TGAGCGGGATTGTGAGTTCT+TGG + chr5.4:46544743-46544762 MS.gene94097:CDS 50.0%
TGGACAAGGTTTCCGAGTGA+AGG + chr5.4:46543454-46543473 MS.gene94097:CDS 50.0%
TGGCGTAACGGCGTTATATC+TGG + chr5.4:46542834-46542853 MS.gene94097:CDS 50.0%
TGGGAATCTGAAGGTGAAGC+TGG + chr5.4:46543077-46543096 MS.gene94097:CDS 50.0%
TGGGAGAATGGTGTTCCGAA+AGG + chr5.4:46542903-46542922 MS.gene94097:CDS 50.0%
TGTAGGCCTGTAACACATGC+CGG + chr5.4:46545331-46545350 MS.gene94097:intron 50.0%
TGTGGGACATATGCAAGCTG+TGG + chr5.4:46545478-46545497 MS.gene94097:intron 50.0%
TTCAAGTCGGGTCGAATGGA+AGG + chr5.4:46542627-46542646 MS.gene94097:CDS 50.0%
TTCTACCTCCGCCTTGTGAA+CGG - chr5.4:46542380-46542399 None:intergenic 50.0%
TTGATGAGGCGGGGTAATCT+TGG - chr5.4:46543482-46543501 None:intergenic 50.0%
TTGGAGGGTTTGTGGGAGAA+TGG + chr5.4:46542891-46542910 MS.gene94097:CDS 50.0%
! CAGATCAAGGTCTTTGAGGG+TGG - chr5.4:46544564-46544583 None:intergenic 50.0%
!! GGGAAGTATCTATGGACCGA+CGG + chr5.4:46542516-46542535 MS.gene94097:CDS 50.0%
AACTCCGCGGTTTGATGAGG+CGG - chr5.4:46543493-46543512 None:intergenic 55.0%
ACCGACGGTTGCATGTACGA+AGG + chr5.4:46542531-46542550 MS.gene94097:CDS 55.0%
AGCTTCACGGTGGTTTCCGA+TGG + chr5.4:46542414-46542433 MS.gene94097:CDS 55.0%
AGTGACACCGACGAGCTTCA+CGG + chr5.4:46542401-46542420 MS.gene94097:CDS 55.0%
CAAGAGCAGAACGGTTGGCA+AGG + chr5.4:46545837-46545856 MS.gene94097:CDS 55.0%
CCCGCGATATGTATCACCGT+CGG - chr5.4:46542673-46542692 None:intergenic 55.0%
CCGACGGTGATACATATCGC+GGG + chr5.4:46542670-46542689 MS.gene94097:CDS 55.0%
CGAAACTCCGCGGTTTGATG+AGG - chr5.4:46543496-46543515 None:intergenic 55.0%
CTTCTTCCAGCAATCACCGC+CGG - chr5.4:46542357-46542376 None:intergenic 55.0%
CTTTCCTCTCCCGGGAAAAG+CGG + chr5.4:46543805-46543824 MS.gene94097:CDS 55.0%
GAAACCACCGTGAAGCTCGT+CGG - chr5.4:46542411-46542430 None:intergenic 55.0%
GAATCCTTATAGCAGCGGGG+AGG + chr5.4:46545904-46545923 MS.gene94097:CDS 55.0%
GCAACGTACCGAATGGATCC+GGG + chr5.4:46542496-46542515 MS.gene94097:CDS 55.0%
GCTGGAAGAAGCCGTTCACA+AGG + chr5.4:46542366-46542385 MS.gene94097:CDS 55.0%
GGAAGAAGCCGTTCACAAGG+CGG + chr5.4:46542369-46542388 MS.gene94097:CDS 55.0%
GGATCCATTCGGTACGTTGC+CGG - chr5.4:46542496-46542515 None:intergenic 55.0%
GGCAACGTACCGAATGGATC+CGG + chr5.4:46542495-46542514 MS.gene94097:CDS 55.0%
TAAGCCTCCCCGCTGCTATA+AGG - chr5.4:46545911-46545930 None:intergenic 55.0%
TTCTCCGGCAACGTACCGAA+TGG + chr5.4:46542489-46542508 MS.gene94097:CDS 55.0%
ACTCCGCGGTTTGATGAGGC+GGG - chr5.4:46543492-46543511 None:intergenic 60.0%
AGAAGCCGTTCACAAGGCGG+AGG + chr5.4:46542372-46542391 MS.gene94097:CDS 60.0%
CCTTCAGGCGCGACTTACGA+GGG + chr5.4:46542600-46542619 MS.gene94097:CDS 60.0%
GAGCAGAACGGTTGGCAAGG+AGG + chr5.4:46545840-46545859 MS.gene94097:CDS 60.0%
GCCAACCGTTCTGCTCTTGC+TGG - chr5.4:46545836-46545855 None:intergenic 60.0%
GCCAGCAAGAGCAGAACGGT+TGG + chr5.4:46545832-46545851 MS.gene94097:CDS 60.0%
TACCCCGCCTCATCAAACCG+CGG + chr5.4:46543486-46543505 MS.gene94097:CDS 60.0%
!! ACTTCCGCTTTTCCCGGGAG+AGG - chr5.4:46543812-46543831 None:intergenic 60.0%
CCCTCGTAAGTCGCGCCTGA+AGG - chr5.4:46542603-46542622 None:intergenic 65.0%
CTCCGCGGTTTGATGAGGCG+GGG - chr5.4:46543491-46543510 None:intergenic 65.0%
CTTCCAGCAATCACCGCCGG+TGG - chr5.4:46542354-46542373 None:intergenic 65.0%
GACACCGACGAGCTTCACGG+TGG + chr5.4:46542404-46542423 MS.gene94097:CDS 65.0%
GCAATCACCGCCGGTGGAGA+AGG - chr5.4:46542348-46542367 None:intergenic 65.0%
GCCTTCAGGCGCGACTTACG+AGG + chr5.4:46542599-46542618 MS.gene94097:CDS 65.0%
TCTCCACCGGCGGTGATTGC+TGG + chr5.4:46542348-46542367 MS.gene94097:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 46542258 46546111 46542258 ID=MS.gene94097
chr5.4 mRNA 46542258 46546111 46542258 ID=MS.gene94097.t1;Parent=MS.gene94097
chr5.4 exon 46542258 46543288 46542258 ID=MS.gene94097.t1.exon1;Parent=MS.gene94097.t1
chr5.4 CDS 46542258 46543288 46542258 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46543381 46543545 46543381 ID=MS.gene94097.t1.exon2;Parent=MS.gene94097.t1
chr5.4 CDS 46543381 46543545 46543381 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46543729 46543894 46543729 ID=MS.gene94097.t1.exon3;Parent=MS.gene94097.t1
chr5.4 CDS 46543729 46543894 46543729 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46544235 46544345 46544235 ID=MS.gene94097.t1.exon4;Parent=MS.gene94097.t1
chr5.4 CDS 46544235 46544345 46544235 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46544437 46544630 46544437 ID=MS.gene94097.t1.exon5;Parent=MS.gene94097.t1
chr5.4 CDS 46544437 46544630 46544437 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46544737 46544867 46544737 ID=MS.gene94097.t1.exon6;Parent=MS.gene94097.t1
chr5.4 CDS 46544737 46544867 46544737 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46544952 46545045 46544952 ID=MS.gene94097.t1.exon7;Parent=MS.gene94097.t1
chr5.4 CDS 46544952 46545045 46544952 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
chr5.4 exon 46545802 46546111 46545802 ID=MS.gene94097.t1.exon8;Parent=MS.gene94097.t1
chr5.4 CDS 46545802 46546111 46545802 ID=cds.MS.gene94097.t1;Parent=MS.gene94097.t1
Gene Sequence

>MS.gene94097

ATGAGTGATACAGTGGTGAACGATGAAGTTGTTGAGGTTGTTAGTTCAACGAAGAGCAACATTCCTGAACCGGAGAAGGAAAACAAACCTTCTCCACCGGCGGTGATTGCTGGAAGAAGCCGTTCACAAGGCGGAGGTAGAAGAGTGACACCGACGAGCTTCACGGTGGTTTCCGATGGTAGATCCGTTGTTGAGAGAGTACTTCCGAACGGAGATTTCTATGCCGGAAGTTTCTCCGGCAACGTACCGAATGGATCCGGGAAGTATCTATGGACCGACGGTTGCATGTACGAAGGTGAATGGAAACGTGGAAAAGCTTCAGGGAAAGGGAAATTTTCATGGCCTTCAGGCGCGACTTACGAGGGAGAGTTCAAGTCGGGTCGAATGGAAGGATTCGGAACATTCGTTGGATCCGACGGTGATACATATCGCGGGTCATGGAGCTCCGATAGAAAACACGGGTTCGGTCAGAAACGTTACGCGAACGGTGATTTATACGAAGGGTGGTGGAAGCGTAACGTTCAAGATGGTCAAGGACGTTACGTTTGGAAGAATGGGAATGAGTATGTTGGTGAATGGCGTAACGGCGTTATATCTGGTAAGGGTTCGTTAGTTTGGGTTAACGGAAACCGTTTGGAGGGTTTGTGGGAGAATGGTGTTCCGAAAGGACAAGGTGTTATGAAGATTCAACATGGTTTTGGTGGGTTTGTTTGGAATGACAATTTTGCCCCTGTGTTGATGAGGAAACGTTCTTCTGTTGATACTACTGTTAGTGGTAGAGGGAGTTTGAATGAGAAGAATTTTCCTAGGATTTGTATTTGGGAATCTGAAGGTGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTCGAGGCTTCTATGTTTTATCGCGATGGAACGTGTTCTGATCCTGATGAGTTTCGAAAGCATCCTTGTTGTTTCTCTTCTGAGGTTAAGAGACCTGGTCAAACTATTTCTAAAGGGCATAAGAATTATGATTTGATGCTTAATTTGCAATTGGGGATTAGGTAAATAAGAGACCCTTGTTTTGTTATTGTTATTGTTATTTTTGTGTTTGAGTTTGTTGTTTAATTAATTTAACTCATCATGTTATGTGTAGATACACGGTTGGGAAGGAAGCATCGAAGTTGCGAGAGCTTAAACCTAGTGATTTTGATCCTAAGGAGAAGTTCTGGACAAGGTTTCCGAGTGAAGGATCCAAGATTACCCCGCCTCATCAAACCGCGGAGTTTCGATGGAAAGATTACTGTCCGGTTGTTTTTAGGTATAACTCTTTTTGTTGTTGAATTTGTATACATGTTTGTTTGTTTTAATGTTGATGTTTTGGTGAGGTGACCTGTGTTGAAATTAATTCGGGTGTTTTGGATGATTTTTGGTTTGGAGTTGTTTAGCGTGTTGAAATTGTGTCGTGCTTTGATGTTGACTTTATTTTGCTTTGATTCTTCAGACATTTGAGGAAGCTGTTTCAGGTTGATCCTGCTGATTATATGTTGGCTATATGTGGGGATGATGCTCTTAGAGAACTTTCCTCTCCCGGGAAAAGCGGAAGTGTTTTCTACTTGACCCAAGATGACAGATTCATGATTAAGACAGTGAAGAAATCTGAAGTCAAGGTTAGATACATGTGTTGTATAGACTTTTGTTGAATTTTGTGTCTTGTTGAATTTTACACGGGTTTGGGTTTGACGATATAATGCTAAGAACAAAACATACCATGTGGAAAAATGATTATTTATCGTTGTTTTTTTCTTCTTCCAGTCAACTGTTAGTCAAATCGTTAGTAGACCAGACAACTTAGGTTTTGTAAGGAGGTCTGGTCTATCTTTGTCGCTATTCGAATATCCCGGTTAAACGTAGATTCTTACCTTTTATAACGCAAGTTACGCAATTACAAGTCTTTGGCTCGATTGTACTCGCATTGATGATGTGTAATTTCTGACTTCCAACTTTTAGGTGCTTCTTCGGATGCTTCGAAGCTATTACAAACACGTGTCCAAATATGAGAATTCACTGGTGACAAAATTCTTTGGGGTACATTGTGTGAAACCTATTGGAGGCCAAAAGGTATGGATCGATAGATATATTATTGTAGCTGTATGGAACGTTTGTCCCATGTTTCCCTGTGCCTGACTTTTCATTGTTATTGGAAAATCAGATCCGGTTTATTGTGATGGGCAATCTTTTCTGCTCTGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGTCGTGCAACAGATAAACCTGAGGATGAGATTGATGAAACAACCACCCTCAAAGACCTTGATCTGAACTATGTGTTTCGTGTACAACGAAATTGGTACCAGGATCTTATTAAGTAAGTTTTTGTGTTTGTTATATTTTTTTTCTTTCTTTCTAGGCTGCATCTTACCAGTGAATCGTTATAGAATACGTATCTGACAAGTTATGGTATTGTGTTCCAGACAAATTGAGCGGGATTGTGAGTTCTTGGAAAACGAGAAAATTATGGACTACAGTCTTTTGGTTGGCCTTCATTTTCGTGATGACAACACTTATGACAAAATGGGGTTGTCACCTTTTCTTCTACGCACTGGTATTGATCTAACACTCACTATAGAGCATATGGTTATGGTTTATGTTATGTAAATATTCAAAGCGATATTCTTTCCCCTTTTAGGCAATCAGGATTCTTATCATACTGAGAAGTTCATGCGTGGTTATCGCTTTCTCGAAGCAGAGTTGCAAGATAGGGATCGAGTTAAATCTGGAAGGTTTGTCATGATCTGTTCTAGTTCCTTAAAATTAGTGTAGATGGATATTTTTTAGATTTAATTTATCAAATGGCTGGGTTTTTAAATGACTTGCAACCAAAGCTAAATTGGAAAAGCTTCAGGGGTGTTTCCTGAATCAGTTGAAATCTTTTATTAATCTCAGTAAAAATGAGAATTGTTTGTAATCTTGAGATATATTAGGGCTTGTGCTGTTGGTTGTTGTGTTATAATACAAATATTATATATTATATTGTTATCTCTTGAAAATATCAGAAAGGAATAAGTTGTAGGCCTGTAACACATGCCGGCTTAAATTAAAATTCTTTATTGGCATTAAAATTGGTTGATAATAATAATTCATGATAATAATTGTAAGTAGTTTGCATTATGTTGGCAAATTAAGTGGGTATAGTTTTGCAGGAAATAGTTGTTTGTGGGACATATGCAAGCTGTGGTCTTAATTCATTAGATTTAATTTGATTTCTAATATATTTTTGGCCTGACAATAAATTCATTGATTGCAATCATGTTTTATTCTTACCTTCTTTGCATTCATGTTCTTTCTGAATTTTTCCCATATACCATATACAGACAACAATTTCAGCTTTCTGTTACTCTGTGTGTGTGGTTTGAAGATTCTGAATTTGTTACTATTTTGTTACACTCCTAAACTGTTAAAGATTGTTGATATTTTCTATATGAATTCATATTTGCCAATTTCGTGACATGTATTAAGTAGGATTCTTCTTTCTTCAGAAAATCATTAATCAGGCTAGGAGCCAATATGCCAGCAAGAGCAGAACGGTTGGCAAGGAGGAGTGATTTTGATCAATACACCAATGGTGGAATCAGCCATTTGAATCCTTATAGCAGCGGGGAGGCTTATGATTGCGTTCTATATTTTGGGGTTATCGATATTTTACAGGACTATGATATCAGCAAAAAGCTTGAGCATGCTTACAAGTCTTTGCAAGTTGACTCTACTTCAATTTCTGCTGTTGATCCAAAGCTATACTCAAAAAGGTTTCGAGATTTTGTTGGAAGAATATTCATTGAAGATTGGTAA
Protein sequence

>MS.gene94097.t1

MSDTVVNDEVVEVVSSTKSNIPEPEKENKPSPPAVIAGRSRSQGGGRRVTPTSFTVVSDGRSVVERVLPNGDFYAGSFSGNVPNGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKHGFGQKRYANGDLYEGWWKRNVQDGQGRYVWKNGNEYVGEWRNGVISGKGSLVWVNGNRLEGLWENGVPKGQGVMKIQHGFGGFVWNDNFAPVLMRKRSSVDTTVSGRGSLNEKNFPRICIWESEGEAGDITCDIVDNVEASMFYRDGTCSDPDEFRKHPCCFSSEVKRPGQTISKGHKNYDLMLNLQLGIRYTVGKEASKLRELKPSDFDPKEKFWTRFPSEGSKITPPHQTAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSVFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYKHVSKYENSLVTKFFGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKPEDEIDETTTLKDLDLNYVFRVQRNWYQDLIKQIERDCEFLENEKIMDYSLLVGLHFRDDNTYDKMGLSPFLLRTGNQDSYHTEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERLARRSDFDQYTNGGISHLNPYSSGEAYDCVLYFGVIDILQDYDISKKLEHAYKSLQVDSTSISAVDPKLYSKRFRDFVGRIFIEDW