AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73925

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73925.t1 MTR_5g459450 98.116 743 13 1 1 743 1 742 0.0 1511
MS.gene73925.t1 MTR_3g073100 75.172 725 144 8 32 732 19 731 0.0 1096
MS.gene73925.t1 MTR_3g097260 66.962 678 192 7 64 732 50 704 0.0 884
MS.gene73925.t1 MTR_8g095170 61.980 697 208 8 51 732 12 666 0.0 865
MS.gene73925.t1 MTR_8g095170 63.589 574 181 5 51 611 12 570 0.0 753
MS.gene73925.t1 MTR_8g039100 50.533 750 304 12 37 732 14 750 0.0 676
MS.gene73925.t1 MTR_1g050740 49.799 747 275 14 64 732 56 780 0.0 660
MS.gene73925.t1 MTR_1g062740 42.356 798 308 15 60 729 42 815 0.0 585
MS.gene73925.t1 MTR_8g088930 40.131 765 342 17 65 727 9 759 2.29e-180 536
MS.gene73925.t1 MTR_8g088930 40.078 766 342 17 65 727 9 760 2.49e-180 535
MS.gene73925.t1 MTR_3g014650 63.070 417 136 7 320 732 371 773 2.75e-167 502
MS.gene73925.t1 MTR_3g014650 52.663 169 68 1 64 232 84 240 2.62e-52 195
MS.gene73925.t1 MTR_3g014650 32.258 124 84 0 70 193 147 270 3.94e-15 80.1
MS.gene73925.t1 MTR_3g014650 44.318 88 49 0 69 156 169 256 7.45e-14 75.9
MS.gene73925.t1 MTR_7g089950 58.118 425 155 7 311 732 387 791 1.26e-161 488
MS.gene73925.t1 MTR_7g089950 60.714 168 66 0 65 232 67 234 1.12e-65 234
MS.gene73925.t1 MTR_7g089950 45.570 79 43 0 70 148 164 242 4.10e-12 70.5
MS.gene73925.t1 MTR_7g089950 35.354 99 64 0 70 168 141 239 1.26e-11 68.9
MS.gene73925.t1 MTR_7g089950 34.343 99 56 1 136 234 69 158 3.94e-11 67.0
MS.gene73925.t1 MTR_8g088930 43.248 585 263 10 65 582 9 591 3.36e-156 470
MS.gene73925.t1 MTR_8g088930 43.248 585 263 10 65 582 9 591 4.34e-156 470
MS.gene73925.t1 MTR_3g005910 84.722 72 11 0 444 515 1 72 1.09e-34 126
MS.gene73925.t1 MTR_8g080860 39.205 176 107 0 57 232 8 183 4.18e-34 132
MS.gene73925.t1 MTR_8g080860 34.375 160 105 0 68 227 111 270 9.45e-24 102
MS.gene73925.t1 MTR_8g080860 37.681 138 86 0 68 205 134 271 1.56e-21 95.9
MS.gene73925.t1 MTR_8g080860 39.205 176 107 0 57 232 4 179 5.32e-34 132
MS.gene73925.t1 MTR_8g080860 34.375 160 105 0 68 227 107 266 1.32e-23 102
MS.gene73925.t1 MTR_8g080860 37.681 138 86 0 68 205 130 267 2.22e-21 95.5
MS.gene73925.t1 MTR_4g107460 37.288 177 108 1 56 232 46 219 2.52e-31 125
MS.gene73925.t1 MTR_4g107460 27.200 250 150 5 94 318 11 253 7.05e-18 86.3
MS.gene73925.t1 MTR_8g080340 39.216 153 92 1 53 205 4 155 7.08e-30 116
MS.gene73925.t1 MTR_8g092090 35.088 171 109 1 62 232 35 203 6.72e-26 107
MS.gene73925.t1 MTR_8g092090 31.847 157 105 1 59 215 78 232 2.78e-17 82.8
MS.gene73925.t1 MTR_8g092090 32.026 153 96 1 88 232 5 157 2.02e-15 77.0
MS.gene73925.t1 MTR_5g058920 38.650 163 100 0 70 232 198 360 1.07e-25 111
MS.gene73925.t1 MTR_5g058920 38.889 126 77 0 71 196 245 370 1.68e-18 89.4
MS.gene73925.t1 MTR_7g451440 35.928 167 107 0 66 232 189 355 2.42e-25 110
MS.gene73925.t1 MTR_7g451440 40.625 128 76 0 71 198 240 367 4.55e-22 100
MS.gene73925.t1 MTR_7g451440 36.792 106 67 0 71 176 263 368 2.03e-14 77.0
MS.gene73925.t1 MTR_3g072650 33.684 190 124 1 45 232 159 348 5.12e-25 108
MS.gene73925.t1 MTR_3g072650 33.684 190 124 1 45 232 159 348 6.21e-25 108
MS.gene73925.t1 MTR_6g043150 32.143 224 121 3 69 268 79 295 7.28e-25 106
MS.gene73925.t1 MTR_6g043150 35.135 185 97 1 66 227 7 191 7.55e-25 106
MS.gene73925.t1 MTR_6g043150 30.986 213 119 2 40 224 114 326 9.97e-20 91.7
MS.gene73925.t1 MTR_6g043150 31.325 166 114 0 67 232 54 219 1.28e-16 82.4
MS.gene73925.t1 MTR_5g010840 39.456 147 81 1 68 214 111 249 7.46e-25 108
MS.gene73925.t1 MTR_5g010840 33.333 171 99 1 70 225 182 352 4.93e-22 99.8
MS.gene73925.t1 MTR_5g010840 40.404 99 59 0 70 168 266 364 2.55e-16 82.4
MS.gene73925.t1 MTR_4g099180 35.928 167 107 0 66 232 169 335 6.06e-24 105
MS.gene73925.t1 MTR_4g099180 36.719 128 81 0 71 198 220 347 3.17e-18 88.6
MS.gene73925.t1 MTR_4g099180 33.019 106 71 0 71 176 243 348 2.43e-11 67.0
MS.gene73925.t1 MTR_2g078470 40.559 143 85 0 67 209 215 357 1.49e-23 103
MS.gene73925.t1 MTR_2g078470 32.710 214 112 3 44 227 49 260 1.59e-23 103
MS.gene73925.t1 MTR_2g078470 30.932 236 114 2 61 250 2 234 3.67e-21 96.7
MS.gene73925.t1 MTR_2g078470 31.183 186 125 1 65 250 190 372 1.55e-19 91.7
MS.gene73925.t1 MTR_2g078470 26.587 252 166 4 67 300 123 373 1.79e-18 88.6
MS.gene73925.t1 MTR_8g007500 34.444 180 115 1 56 232 181 360 2.69e-23 104
MS.gene73925.t1 MTR_8g007500 39.844 128 77 0 71 198 245 372 9.33e-21 96.7
MS.gene73925.t1 MTR_8g007500 35.849 106 68 0 71 176 268 373 1.52e-14 77.4
MS.gene73925.t1 MTR_8g080310 35.915 142 91 0 91 232 9 150 1.94e-20 89.4
MS.gene73925.t1 MTR_8g080310 33.333 126 84 0 107 232 2 127 2.88e-16 77.4
MS.gene73925.t1 MTR_8g095240 34.896 192 92 4 74 232 9 200 2.14e-20 95.1
MS.gene73925.t1 MTR_8g095240 30.500 200 105 2 67 232 48 247 6.76e-18 87.4
MS.gene73925.t1 MTR_8g095240 29.545 176 113 2 68 232 118 293 1.92e-16 82.8
MS.gene73925.t1 MTR_8g095240 36.301 146 92 1 90 234 2 147 9.71e-16 80.9
MS.gene73925.t1 MTR_8g095240 31.293 147 100 1 71 216 177 323 1.61e-13 73.9
MS.gene73925.t1 MTR_8g095240 30.137 146 100 1 38 183 193 336 4.62e-11 66.2
MS.gene73925.t1 MTR_8g080350 35.616 146 79 2 66 196 192 337 2.78e-17 85.1
MS.gene73925.t1 MTR_8g080350 29.897 194 98 2 68 223 125 318 1.94e-16 82.8
MS.gene73925.t1 MTR_8g080350 29.710 138 97 0 69 206 103 240 2.70e-14 75.9
MS.gene73925.t1 MTR_8g080350 27.097 155 88 2 96 227 86 238 4.35e-11 66.2
MS.gene73925.t1 MTR_3g005900 72.000 50 10 1 571 620 1 46 6.82e-16 73.2
MS.gene73925.t1 MTR_4g099180 34.426 122 80 0 81 202 161 282 9.00e-16 79.3
MS.gene73925.t1 MTR_4g099180 36.134 119 76 0 66 184 169 287 3.90e-15 77.4
MS.gene73925.t1 MTR_4g099180 34.426 122 80 0 81 202 161 282 2.85e-15 78.2
MS.gene73925.t1 MTR_4g099180 37.069 116 73 0 66 181 169 284 1.11e-14 76.3
MS.gene73925.t1 MTR_1g112280 29.381 194 105 4 28 220 579 741 1.81e-14 77.8
MS.gene73925.t1 MTR_3g023310 33.600 125 70 2 84 208 11 122 4.45e-14 71.6
MS.gene73925.t1 MTR_8g092410 35.088 114 69 3 123 232 141 253 5.18e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73925.t1 AT1G21980 74.722 720 148 8 31 732 48 751 0.0 1082
MS.gene73925.t1 AT1G77740 74.895 713 148 7 39 732 53 753 0.0 1074
MS.gene73925.t1 AT1G77740 74.895 713 148 7 39 732 53 753 0.0 1074
MS.gene73925.t1 AT2G26420 59.860 715 234 12 47 732 28 718 0.0 837
MS.gene73925.t1 AT2G26420 59.860 715 234 12 47 732 28 718 0.0 837
MS.gene73925.t1 AT2G26420 59.384 714 225 11 47 732 28 704 0.0 829
MS.gene73925.t1 AT3G07960 54.282 724 245 15 64 732 22 714 0.0 740
MS.gene73925.t1 AT2G41210 52.624 724 271 13 64 732 65 771 0.0 731
MS.gene73925.t1 AT3G56960 52.545 727 272 14 64 732 67 778 0.0 728
MS.gene73925.t1 AT3G56960 52.545 727 272 14 64 732 67 778 0.0 728
MS.gene73925.t1 AT3G07960 55.401 574 189 10 64 583 22 582 0.0 620
MS.gene73925.t1 AT3G07960 32.432 148 95 1 39 181 61 208 1.51e-16 84.3
MS.gene73925.t1 AT3G07960 55.401 574 189 10 64 583 22 582 0.0 620
MS.gene73925.t1 AT3G07960 32.432 148 95 1 39 181 61 208 1.52e-16 84.3
MS.gene73925.t1 AT3G07960 55.401 574 189 10 64 583 22 582 0.0 620
MS.gene73925.t1 AT3G07960 32.432 148 95 1 39 181 61 208 1.52e-16 84.3
MS.gene73925.t1 AT3G09920 41.816 782 327 17 63 732 47 812 0.0 579
MS.gene73925.t1 AT3G09920 41.816 782 327 17 63 732 47 812 0.0 579
MS.gene73925.t1 AT3G09920 41.816 782 327 17 63 732 47 812 0.0 579
MS.gene73925.t1 AT3G09920 41.816 782 327 17 63 732 47 812 0.0 579
MS.gene73925.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene73925.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene73925.t1 AT1G10900 41.821 758 340 16 65 732 7 753 0.0 543
MS.gene73925.t1 AT1G60890 40.409 782 332 19 64 731 6 767 1.40e-179 534
MS.gene73925.t1 AT1G60890 40.409 782 332 19 64 731 18 779 2.48e-179 533
MS.gene73925.t1 AT1G01460 38.061 423 213 8 355 732 4 422 4.23e-81 266
MS.gene73925.t1 AT4G01190 38.346 399 188 6 371 730 12 391 1.67e-78 258
MS.gene73925.t1 AT4G01190 38.346 399 188 6 371 730 22 401 1.90e-78 258
MS.gene73925.t1 AT4G01190 38.346 399 188 6 371 730 22 401 1.90e-78 258
MS.gene73925.t1 AT1G77660 37.126 167 105 0 66 232 175 341 6.44e-27 114
MS.gene73925.t1 AT1G77660 36.508 126 80 0 71 196 226 351 1.03e-16 84.0
MS.gene73925.t1 AT1G21920 37.423 163 102 0 70 232 175 337 5.42e-25 108
MS.gene73925.t1 AT1G21920 38.281 128 79 0 71 198 222 349 5.17e-18 87.0
MS.gene73925.t1 AT1G21920 37.423 163 102 0 70 232 175 337 7.95e-25 108
MS.gene73925.t1 AT1G21920 38.281 128 79 0 71 198 222 349 6.47e-18 87.4
MS.gene73925.t1 AT2G35170 35.404 161 104 0 72 232 229 389 3.84e-23 104
MS.gene73925.t1 AT2G35170 37.984 129 80 0 71 199 274 402 1.15e-21 99.8
MS.gene73925.t1 AT4G17080 34.969 163 106 0 70 232 258 420 1.44e-22 102
MS.gene73925.t1 AT4G17080 37.209 129 81 0 71 199 305 433 4.94e-21 97.8
MS.gene73925.t1 AT4G17080 32.867 143 94 1 90 232 234 374 5.60e-13 72.8
MS.gene73925.t1 AT1G34260 34.653 202 102 11 398 579 1192 1383 1.77e-14 78.6
MS.gene73925.t1 AT1G34260 34.653 202 102 11 398 579 1192 1383 1.77e-14 78.6
MS.gene73925.t1 AT1G34260 34.653 202 102 11 398 579 1192 1383 1.77e-14 78.6
MS.gene73925.t1 AT1G34260 34.653 202 102 11 398 579 952 1143 1.77e-14 78.2
MS.gene73925.t1 AT1G75010 30.469 128 87 2 94 220 604 730 1.17e-12 72.0

Find 206 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATTGCGTTCTATATTT+TGG 0.084583 5.2:+50520612 MS.gene73925:CDS
AACCAGTGAATTCTCATATT+TGG 0.135935 5.2:-50518965 None:intergenic
TGATAACACTTATGACAAAA+TGG 0.240906 5.2:+50519507 MS.gene73925:CDS
CTGGTAAGGGTTCGTTAGTT+TGG 0.244235 5.2:+50517527 MS.gene73925:CDS
ACATTTGAGGAAGCTGTTTC+AGG 0.245765 5.2:+50518419 MS.gene73925:CDS
CACTGGTTACAAAATTCTTT+GGG 0.246241 5.2:+50518980 MS.gene73925:CDS
TCACTGGTTACAAAATTCTT+TGG 0.255250 5.2:+50518979 MS.gene73925:CDS
TTAATTTGCAATTGGGGATT+AGG 0.273921 5.2:+50517941 MS.gene73925:CDS
GCCAACCGTTCTGCTCTTGC+TGG 0.278983 5.2:-50520516 None:intergenic
ATCCAAAGCTATACTCAAAA+AGG 0.280883 5.2:+50520730 MS.gene73925:CDS
TCTCCACCGGCGGTGATTGC+TGG 0.283531 5.2:+50517022 MS.gene73925:CDS
CTTGGAAAACGAGAAAATTA+TGG 0.284377 5.2:+50519450 MS.gene73925:CDS
TGTTTCGTGTACAACGAAAT+TGG 0.287459 5.2:+50519281 MS.gene73925:CDS
TGAGCGGGATTGTGAGTTCT+TGG 0.304803 5.2:+50519432 MS.gene73925:CDS
AAATCAAATCGTCTATGAAT+TGG 0.308050 5.2:-50519169 None:intergenic
TGGAAACGTGGAAAAGCTTC+AGG 0.316635 5.2:+50517232 MS.gene73925:CDS
TTTGTGATCATCATGATTCA+TGG 0.316766 5.2:-50520854 None:intergenic
TGGCGTAACGGCGTTATATC+TGG 0.323084 5.2:+50517508 MS.gene73925:CDS
TCTTCAGAAAATCATTAATC+AGG 0.329444 5.2:+50520478 MS.gene73925:intron
TTCATAACACCTTGTCCTTT+CGG 0.334631 5.2:-50517592 None:intergenic
AATTATGGACTACAGTCTTT+TGG 0.340214 5.2:+50519465 MS.gene73925:CDS
TTCTGCTCTTGCTGGCATAT+TGG 0.341644 5.2:-50520508 None:intergenic
TAAGCCTCCCCGCTGCTATA+AGG 0.344398 5.2:-50520591 None:intergenic
ATGAAGATTCAACATGGTTT+TGG 0.351168 5.2:+50517610 MS.gene73925:CDS
TGGTAAGGGTTCGTTAGTTT+GGG 0.353178 5.2:+50517528 MS.gene73925:CDS
TCGAAGCAGAGTTGCAAGAT+AGG 0.359055 5.2:+50519692 MS.gene73925:CDS
GGTTCGTTAGTTTGGGTTAA+CGG 0.360690 5.2:+50517535 MS.gene73925:CDS
TTGATCCTAAGGAGAAGTTC+TGG 0.368369 5.2:+50518124 MS.gene73925:CDS
ATGGATCCGGGAAGTATCTA+TGG 0.372629 5.2:+50517182 MS.gene73925:CDS
TTGAAACCCACTTGCAAAAG+AGG 0.384867 5.2:+50520901 MS.gene73925:CDS
GATAACACTTATGACAAAAT+GGG 0.385384 5.2:+50519508 MS.gene73925:CDS
GGACGTTACGTTTGGAAGAA+TGG 0.386687 5.2:+50517466 MS.gene73925:CDS
GAAGAATATTCATTGAAGAT+TGG 0.390671 5.2:+50520769 MS.gene73925:CDS
TTCTACGCCGGAAGTTTCTC+CGG 0.400570 5.2:+50517148 MS.gene73925:CDS
TAATCATGAATCTGTCATCT+TGG 0.402081 5.2:-50518536 None:intergenic
TCTGTTGATACTACTGTTAG+TGG 0.407554 5.2:+50517685 MS.gene73925:CDS
CTGATGAACAGTAAACTCTA+AGG 0.407609 5.2:-50520926 None:intergenic
GTTGATGCTTAATTTGCAAT+TGG 0.408791 5.2:+50517933 MS.gene73925:CDS
ATGGTCAAGGACGTTACGTT+TGG 0.409474 5.2:+50517458 MS.gene73925:CDS
GTTTCATCAATCTCATCCTC+AGG 0.418360 5.2:-50519226 None:intergenic
GGATCCATTCGGTACGTTGC+CGG 0.418393 5.2:-50517167 None:intergenic
TTGATGAGGCGGGGTAATCT+TGG 0.419366 5.2:-50518169 None:intergenic
TTGGGTTAACGGAAACCGTT+TGG 0.419511 5.2:+50517546 MS.gene73925:CDS
GATAGGGATCGAGTTAAATC+TGG 0.420387 5.2:+50519709 MS.gene73925:CDS
GTCGGTCCATAGATACTTCC+CGG 0.423054 5.2:-50517188 None:intergenic
GGCAACGTACCGAATGGATC+CGG 0.425374 5.2:+50517169 MS.gene73925:CDS
TTTGATTCTTCAGACATTTG+AGG 0.429922 5.2:+50518406 MS.gene73925:intron
TTGGAGGGTTTGTGGGAGAA+TGG 0.430235 5.2:+50517565 MS.gene73925:CDS
TACGTTGCCGGAGAAACTTC+CGG 0.431856 5.2:-50517155 None:intergenic
TTGATGCTTAATTTGCAATT+GGG 0.435208 5.2:+50517934 MS.gene73925:CDS
CTTGTCCAGAACTTCTCCTT+AGG 0.442703 5.2:-50518129 None:intergenic
AACTCAAGTGAGATTCTTTG+AGG 0.444966 5.2:-50520965 None:intergenic
GACGTTACGTTTGGAAGAAT+GGG 0.445546 5.2:+50517467 MS.gene73925:CDS
CTGGTCAAACTATTTCTAAA+GGG 0.449919 5.2:+50517896 MS.gene73925:CDS
CTTAGAGAACTTTCCTCTCC+CGG 0.455504 5.2:+50518486 MS.gene73925:CDS
CATAGACGATTTGATTTGAA+AGG 0.457560 5.2:+50519175 MS.gene73925:CDS
GTTCAGATCAAGGTCTTTGA+GGG 0.462840 5.2:-50519254 None:intergenic
TCCTTGTTGTTTCTCTTCTG+AGG 0.466238 5.2:+50517864 MS.gene73925:CDS
CAAATGGCTGATTCCACCAT+TGG 0.468458 5.2:-50520565 None:intergenic
GTACATTGCGTGAAACCAAT+TGG 0.470797 5.2:+50519003 MS.gene73925:CDS
TCCGATAGAAAACACGGGTT+CGG 0.471872 5.2:+50517376 MS.gene73925:CDS
AATCATGAATCTGTCATCTT+GGG 0.472481 5.2:-50518535 None:intergenic
TAACGGCGTTATATCTGGTA+AGG 0.473277 5.2:+50517513 MS.gene73925:CDS
GTGATACATATCGCGGGTCA+TGG 0.475326 5.2:+50517350 MS.gene73925:CDS
CCTGGTCAAACTATTTCTAA+AGG 0.477641 5.2:+50517895 MS.gene73925:CDS
TCAGATCCGGTTTATTGTGA+TGG 0.478024 5.2:+50519123 MS.gene73925:intron
GAAACCGTTTGGAGGGTTTG+TGG 0.478922 5.2:+50517557 MS.gene73925:CDS
GAAGAGCAACATTCCTGAAC+CGG 0.481606 5.2:+50516982 MS.gene73925:CDS
CCCTCGTAAGTCGCGCCTGA+AGG 0.482364 5.2:-50517274 None:intergenic
GATTGCCCATCACAATAAAC+CGG 0.485074 5.2:-50519129 None:intergenic
AAACCGTTTGGAGGGTTTGT+GGG 0.486108 5.2:+50517558 MS.gene73925:CDS
ATTTGAATCCTTATAGCAGC+GGG 0.489048 5.2:+50520583 MS.gene73925:CDS
ATACCAGTGCGTAGAAGAAA+AGG 0.493562 5.2:-50519538 None:intergenic
TCGGGTCGAATGGAAGGATT+CGG 0.497771 5.2:+50517307 MS.gene73925:CDS
GATACTACTGTTAGTGGTAG+AGG 0.499269 5.2:+50517691 MS.gene73925:CDS
GATTATATGTTGGCTATATG+TGG 0.502251 5.2:+50518453 MS.gene73925:CDS
AACTCCGTGGTTTGATGAGG+CGG 0.502745 5.2:-50518180 None:intergenic
AGTTCAGATCAAGGTCTTTG+AGG 0.508946 5.2:-50519255 None:intergenic
GATTCCCAAATACAAATCCT+AGG 0.509645 5.2:-50517736 None:intergenic
CAGATCCGGTTTATTGTGAT+GGG 0.510029 5.2:+50519124 MS.gene73925:intron
GTTGCATGTACGAAGGTGAA+TGG 0.510431 5.2:+50517212 MS.gene73925:CDS
GTGGAAAAGCTTCAGGGAAA+GGG 0.511451 5.2:+50517239 MS.gene73925:CDS
CGCTGCTATAAGGATTCAAA+TGG 0.515820 5.2:-50520581 None:intergenic
GAAGGATTCGGAACATTCGT+TGG 0.521458 5.2:+50517319 MS.gene73925:CDS
TCTTCTGAGGTTAAGAGACC+TGG 0.521675 5.2:+50517877 MS.gene73925:CDS
GCAATCACCGCCGGTGGAGA+AGG 0.522071 5.2:-50517019 None:intergenic
GAAACCAATTGGAGGCCAAA+AGG 0.522125 5.2:+50519014 MS.gene73925:CDS
AAACTTACTTAATAAGATCC+TGG 0.522332 5.2:-50519306 None:intergenic
ACTCCGTGGTTTGATGAGGC+GGG 0.523115 5.2:-50518179 None:intergenic
CGTGGAAAAGCTTCAGGGAA+AGG 0.523548 5.2:+50517238 MS.gene73925:CDS
AGATACTTCCCGGATCCATT+CGG 0.526389 5.2:-50517178 None:intergenic
GTTCATCAGATCATTGTAAG+TGG 0.526708 5.2:+50520940 MS.gene73925:CDS
TTAGAGAACTTTCCTCTCCC+GGG 0.528049 5.2:+50518487 MS.gene73925:CDS
CGAAGCAGAGTTGCAAGATA+GGG 0.528077 5.2:+50519693 MS.gene73925:CDS
GTGATTTATACGAAGGGTGG+TGG 0.528555 5.2:+50517419 MS.gene73925:CDS
CAACATTCCTGAACCGGAGA+AGG 0.528680 5.2:+50516988 MS.gene73925:CDS
AGAGTTCAAGTCGGGTCGAA+TGG 0.530606 5.2:+50517297 MS.gene73925:CDS
CCTTTAGAAATAGTTTGACC+AGG 0.531392 5.2:-50517895 None:intergenic
CAAGAGCAGAACGGTTGGCA+AGG 0.532403 5.2:+50520520 MS.gene73925:CDS
ATCAAACCACGGAGTTTCGA+TGG 0.537995 5.2:+50518187 MS.gene73925:CDS
TACGAGGGAGAGTTCAAGTC+GGG 0.538370 5.2:+50517289 MS.gene73925:CDS
TGATGCTTAATTTGCAATTG+GGG 0.539661 5.2:+50517935 MS.gene73925:CDS
TTCAAGTCGGGTCGAATGGA+AGG 0.541704 5.2:+50517301 MS.gene73925:CDS
GGAACATTCGTTGGATCCGA+CGG 0.543679 5.2:+50517328 MS.gene73925:CDS
TGGACAAGGTTTCCGAGTGA+AGG 0.546695 5.2:+50518144 MS.gene73925:CDS
CAGATCAAGGTCTTTGAGGG+TGG 0.547100 5.2:-50519251 None:intergenic
CTTTCCTCTCCCGGGAAAAG+CGG 0.547869 5.2:+50518495 MS.gene73925:CDS
TTCATCAGATCATTGTAAGT+GGG 0.548939 5.2:+50520941 MS.gene73925:CDS
AGCTTCACGGTGGTTTCCGA+TGG 0.550449 5.2:+50517088 MS.gene73925:CDS
ATTATATGTTGGCTATATGT+GGG 0.552492 5.2:+50518454 MS.gene73925:CDS
TGTTATCATCACGAAAATGA+AGG 0.554160 5.2:-50519492 None:intergenic
GCAACGTACCGAATGGATCC+GGG 0.560372 5.2:+50517170 MS.gene73925:CDS
GGAAACGTGGAAAAGCTTCA+GGG 0.560933 5.2:+50517233 MS.gene73925:CDS
TCTCCCACAAACCCTCCAAA+CGG 0.561965 5.2:-50517561 None:intergenic
ATTTGTATTTGGGAATCTGA+AGG 0.563741 5.2:+50517742 MS.gene73925:CDS
GTCTACCACCTCCTTGTGAA+CGG 0.563775 5.2:-50517051 None:intergenic
TTATGTGTAGATACACGGTT+GGG 0.565022 5.2:+50518061 MS.gene73925:intron
TTTGATCAATACACCAATGG+TGG 0.566117 5.2:+50520552 MS.gene73925:CDS
TGGGAATCTGAAGGTGAAGC+TGG 0.566561 5.2:+50517751 MS.gene73925:CDS
ATAGCCAACATATAATCAGC+AGG 0.569375 5.2:-50518447 None:intergenic
GAAACACATAGTTCAGATCA+AGG 0.569553 5.2:-50519264 None:intergenic
CTAAGGAGAAGTTCTGGACA+AGG 0.572481 5.2:+50518130 MS.gene73925:CDS
TCCTTAGGATCAAAATCACT+AGG 0.573231 5.2:-50518114 None:intergenic
TGAAACCCACTTGCAAAAGA+GGG 0.573637 5.2:+50520902 MS.gene73925:CDS
CTCCGTGGTTTGATGAGGCG+GGG 0.574159 5.2:-50518178 None:intergenic
GCCAGCAAGAGCAGAACGGT+TGG 0.576008 5.2:+50520515 MS.gene73925:CDS
AGTGAAGAAATCTGAAGTCA+AGG 0.576419 5.2:+50518563 MS.gene73925:CDS
TTCTCCGGCAACGTACCGAA+TGG 0.579587 5.2:+50517163 MS.gene73925:CDS
TCGATGGAAAGATTACTGTC+CGG 0.582178 5.2:+50518203 MS.gene73925:CDS
CCGGCGTAGAAATCTCCGTT+CGG 0.582234 5.2:-50517136 None:intergenic
GCCTTCAGGCGCGACTTACG+AGG 0.585744 5.2:+50517273 MS.gene73925:CDS
TGGGAGAATGGTGTTCCGAA+AGG 0.586485 5.2:+50517577 MS.gene73925:CDS
GGTTAACGGAAACCGTTTGG+AGG 0.586593 5.2:+50517549 MS.gene73925:CDS
AGTGACACCGACGAGCTTCA+CGG 0.588056 5.2:+50517075 MS.gene73925:CDS
GTGTTCCAGACAAATTGAGC+GGG 0.588866 5.2:+50519417 MS.gene73925:intron
AGAAAATCATTAATCAGGCT+AGG 0.589168 5.2:+50520483 MS.gene73925:intron
GTTATGTGTAGATACACGGT+TGG 0.590677 5.2:+50518060 MS.gene73925:intron
GTCCAAATATGAGAATTCAC+TGG 0.592833 5.2:+50518963 MS.gene73925:CDS
CTCAACAACGGATCTACCAT+CGG 0.594963 5.2:-50517104 None:intergenic
CGAAACTCCGTGGTTTGATG+AGG 0.598691 5.2:-50518183 None:intergenic
TGATCCTGCTGATTATATGT+TGG 0.603422 5.2:+50518443 MS.gene73925:CDS
GGAAAACAAACCTTCTCCAC+CGG 0.604991 5.2:+50517009 MS.gene73925:CDS
AATGGTGTTCCGAAAGGACA+AGG 0.606673 5.2:+50517583 MS.gene73925:CDS
GTTAACGGAAACCGTTTGGA+GGG 0.607741 5.2:+50517550 MS.gene73925:CDS
GGAATGAGTATGTTGGTGAA+TGG 0.608130 5.2:+50517488 MS.gene73925:CDS
AGAAGCCGTTCACAAGGAGG+TGG 0.608692 5.2:+50517046 MS.gene73925:CDS
GTGTAGATACACGGTTGGGA+AGG 0.610224 5.2:+50518065 MS.gene73925:intron
TATGTTGGTGAATGGCGTAA+CGG 0.613312 5.2:+50517496 MS.gene73925:CDS
AAGAATGGGAATGAGTATGT+TGG 0.613469 5.2:+50517481 MS.gene73925:CDS
ATACTACTGTTAGTGGTAGA+GGG 0.613626 5.2:+50517692 MS.gene73925:CDS
GAGCAGAACGGTTGGCAAGG+AGG 0.613970 5.2:+50520523 MS.gene73925:CDS
GGTCAGAAACGTTACGCGAA+CGG 0.615476 5.2:+50517397 MS.gene73925:CDS
ACTGGTTACAAAATTCTTTG+GGG 0.619709 5.2:+50518981 MS.gene73925:CDS
CTTCCAGCAATCACCGCCGG+TGG 0.622524 5.2:-50517025 None:intergenic
GTAATCTTGGATCCTTCACT+CGG 0.623506 5.2:-50518156 None:intergenic
CTTCTTCCAGCAATCACCGC+CGG 0.623571 5.2:-50517028 None:intergenic
CCGAACGGAGATTTCTACGC+CGG 0.624286 5.2:+50517136 MS.gene73925:CDS
ATAACACTTATGACAAAATG+GGG 0.625320 5.2:+50519509 MS.gene73925:CDS
ATCTTTCCATCGAAACTCCG+TGG 0.627373 5.2:-50518193 None:intergenic
TGATATTGTTGATAATGTCG+AGG 0.629658 5.2:+50517786 MS.gene73925:CDS
GCTGGAAGAAGCCGTTCACA+AGG 0.630714 5.2:+50517040 MS.gene73925:CDS
TGGAAGCGTAACGTTCAAGA+TGG 0.631023 5.2:+50517439 MS.gene73925:CDS
GAACGTTTCCTCATCAACAC+AGG 0.631655 5.2:-50517661 None:intergenic
GCGAACGGTGATTTATACGA+AGG 0.632599 5.2:+50517412 MS.gene73925:CDS
GATTTGAAAGGATCTTCACA+TGG 0.636840 5.2:+50519187 MS.gene73925:CDS
CCTTCAGGCGCGACTTACGA+GGG 0.638477 5.2:+50517274 MS.gene73925:CDS
TGGAGCTCCGATAGAAAACA+CGG 0.638988 5.2:+50517370 MS.gene73925:CDS
CATTTGAATCCTTATAGCAG+CGG 0.641163 5.2:+50520582 MS.gene73925:CDS
AACGGCGTTATATCTGGTAA+GGG 0.645119 5.2:+50517514 MS.gene73925:CDS
TCATCAGATCATTGTAAGTG+GGG 0.649045 5.2:+50520942 MS.gene73925:CDS
TCATGTTATGTGTAGATACA+CGG 0.650708 5.2:+50518056 MS.gene73925:intron
CATTGCGTGAAACCAATTGG+AGG 0.650725 5.2:+50519006 MS.gene73925:CDS
AACGTTTCCTCATCAACACA+GGG 0.651828 5.2:-50517660 None:intergenic
GGTGAACGATGAAGTTGTTG+AGG 0.655019 5.2:+50516946 MS.gene73925:CDS
GAAACCACCGTGAAGCTCGT+CGG 0.655705 5.2:-50517082 None:intergenic
CGTAACGTTCAAGATGGTCA+AGG 0.657499 5.2:+50517445 MS.gene73925:CDS
GGGATCGAGTTAAATCTGGA+AGG 0.660315 5.2:+50519713 MS.gene73925:CDS
ACGGTGATTTATACGAAGGG+TGG 0.664730 5.2:+50517416 MS.gene73925:CDS
GTTGAGAGAGTACTTCCGAA+CGG 0.664758 5.2:+50517121 MS.gene73925:CDS
TGTACAACGAAATTGGTACC+AGG 0.667243 5.2:+50519288 MS.gene73925:CDS
AAACAAACCTTCTCCACCGG+CGG 0.669189 5.2:+50517012 MS.gene73925:CDS
GGGAAGTATCTATGGACCGA+CGG 0.669212 5.2:+50517190 MS.gene73925:CDS
TTCGAAAATGAGTGATACAG+TGG 0.669503 5.2:+50516925 None:intergenic
CCGACGGTGATACATATCGC+GGG 0.670057 5.2:+50517344 MS.gene73925:CDS
CGAACGGTGATTTATACGAA+GGG 0.671404 5.2:+50517413 MS.gene73925:CDS
TGTGTTCCAGACAAATTGAG+CGG 0.672020 5.2:+50519416 MS.gene73925:intron
GGAAGAAGCCGTTCACAAGG+AGG 0.676227 5.2:+50517043 MS.gene73925:CDS
CCCGCGATATGTATCACCGT+CGG 0.676716 5.2:-50517344 None:intergenic
CATACTGAGAAGTTCATGCG+TGG 0.677957 5.2:+50519658 MS.gene73925:CDS
GAATCCTTATAGCAGCGGGG+AGG 0.683149 5.2:+50520587 MS.gene73925:CDS
TCCGACGGTGATACATATCG+CGG 0.684537 5.2:+50517343 MS.gene73925:CDS
TTATATGTTGGCTATATGTG+GGG 0.684561 5.2:+50518455 MS.gene73925:CDS
ACCTCAGAAGAGAAACAACA+AGG 0.687681 5.2:-50517865 None:intergenic
ACCTTCGTACATGCAACCGT+CGG 0.692042 5.2:-50517206 None:intergenic
ATATGCCAGCAAGAGCAGAA+CGG 0.698498 5.2:+50520511 MS.gene73925:CDS
GGTGTTATGAAGATTCAACA+TGG 0.703414 5.2:+50517604 MS.gene73925:CDS
CGGAAGTACTCTCTCAACAA+CGG 0.711881 5.2:-50517116 None:intergenic
TACCCCGCCTCATCAAACCA+CGG 0.724086 5.2:+50518176 MS.gene73925:CDS
TTACGAGGGAGAGTTCAAGT+CGG 0.724697 5.2:+50517288 MS.gene73925:CDS
TACGAAGGTGAATGGAAACG+TGG 0.729766 5.2:+50517220 MS.gene73925:CDS
GGAGCTCCGATAGAAAACAC+GGG 0.731752 5.2:+50517371 MS.gene73925:CDS
ACCGACGGTTGCATGTACGA+AGG 0.732846 5.2:+50517205 MS.gene73925:CDS
TTTGAATCCTTATAGCAGCG+GGG 0.739961 5.2:+50520584 MS.gene73925:CDS
TCGTGCAACAGATAAACCTG+AGG 0.756825 5.2:+50519210 MS.gene73925:CDS
GACACCGACGAGCTTCACGG+TGG 0.776234 5.2:+50517078 MS.gene73925:CDS
ACGTTTCCTCATCAACACAG+GGG 0.812629 5.2:-50517659 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATTTTTTTCTTTCT+AGG + chr5.2:50519340-50519359 MS.gene73925:intron 10.0%
!!! TTTGATTTCTAATATATTTT+TGG + chr5.2:50520204-50520223 MS.gene73925:intron 10.0%
!! CTTAAATTCAAATTCTTTAT+TGG + chr5.2:50520037-50520056 MS.gene73925:intron 15.0%
!!! TTTAGGTTTAATTTATCAAA+TGG + chr5.2:50519782-50519801 MS.gene73925:intron 15.0%
!! AAAAATCCAGGAAAAATATT+TGG + chr5.2:50520874-50520893 MS.gene73925:CDS 20.0%
!! ATTAATGTAGATGGATATTT+AGG + chr5.2:50519765-50519784 MS.gene73925:intron 20.0%
!! TAAAGAATTTGAATTTAAGC+CGG - chr5.2:50520036-50520055 None:intergenic 20.0%
!! TCAATAAGAATAACAAAACA+CGG - chr5.2:50517979-50517998 None:intergenic 20.0%
!! TGTAATCTTGAGATATATTA+GGG + chr5.2:50519912-50519931 MS.gene73925:intron 20.0%
!! TTCCTTAAAATTAATGTAGA+TGG + chr5.2:50519756-50519775 MS.gene73925:intron 20.0%
!! TTCTTTATTGGCATTAAAAT+TGG + chr5.2:50520049-50520068 MS.gene73925:intron 20.0%
!! TTGTAATCTTGAGATATATT+AGG + chr5.2:50519911-50519930 MS.gene73925:intron 20.0%
!!! ATCCATCTACATTAATTTTA+AGG - chr5.2:50519761-50519780 None:intergenic 20.0%
!!! TAAATAATCATTTTTCCACA+TGG - chr5.2:50518687-50518706 None:intergenic 20.0%
!!! TTGTTTTAATGTTGATGTTT+TGG + chr5.2:50518276-50518295 MS.gene73925:intron 20.0%
! AAACTTACTTAATAAGATCC+TGG - chr5.2:50519309-50519328 None:intergenic 25.0%
! AAATCAAATCGTCTATGAAT+TGG - chr5.2:50519172-50519191 None:intergenic 25.0%
! AATCTCAGTAAAAATGAGAA+TGG + chr5.2:50519887-50519906 MS.gene73925:intron 25.0%
! ATAACACTTATGACAAAATG+GGG + chr5.2:50519509-50519528 MS.gene73925:CDS 25.0%
! ATCTCTTGAAAATATCAGAA+AGG + chr5.2:50519984-50520003 MS.gene73925:intron 25.0%
! ATTATGTTGGCAAATTAAGT+GGG + chr5.2:50520113-50520132 MS.gene73925:intron 25.0%
! CAATAAGAATAACAAAACAC+GGG - chr5.2:50517978-50517997 None:intergenic 25.0%
! CAATCAATGAATTTATTGTC+AGG - chr5.2:50520230-50520249 None:intergenic 25.0%
! GAAGAATATTCATTGAAGAT+TGG + chr5.2:50520769-50520788 MS.gene73925:CDS 25.0%
! GATAACACTTATGACAAAAT+GGG + chr5.2:50519508-50519527 MS.gene73925:CDS 25.0%
! GATATATTATTGTAGCTGTA+TGG + chr5.2:50519049-50519068 MS.gene73925:intron 25.0%
! TCTTCAGAAAATCATTAATC+AGG + chr5.2:50520478-50520497 MS.gene73925:intron 25.0%
! TGATAACACTTATGACAAAA+TGG + chr5.2:50519507-50519526 MS.gene73925:CDS 25.0%
!! AAACTTCCAAATATTTTTCC+TGG - chr5.2:50520883-50520902 None:intergenic 25.0%
!! ATGATTGCGTTCTATATTTT+GGG + chr5.2:50520613-50520632 MS.gene73925:CDS 25.0%
!! ATTATATGTTGGCTATATGT+GGG + chr5.2:50518454-50518473 MS.gene73925:CDS 25.0%
!! ATTTTCCTAGGATTTGTATT+TGG + chr5.2:50517731-50517750 MS.gene73925:CDS 25.0%
!! GTTTAATTTATCAAATGGCT+GGG + chr5.2:50519787-50519806 MS.gene73925:intron 25.0%
!! TATGATTGCGTTCTATATTT+TGG + chr5.2:50520612-50520631 MS.gene73925:CDS 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG + chr5.2:50517732-50517751 MS.gene73925:CDS 25.0%
!!! TTGATGCTTAATTTGCAATT+GGG + chr5.2:50517934-50517953 MS.gene73925:CDS 25.0%
AACCAGTGAATTCTCATATT+TGG - chr5.2:50518968-50518987 None:intergenic 30.0%
AATACGTATCTGACAAGTTA+TGG + chr5.2:50519390-50519409 MS.gene73925:intron 30.0%
AATCATGAATCTGTCATCTT+GGG - chr5.2:50518538-50518557 None:intergenic 30.0%
ACCTGTGTTGAAATTAATTC+GGG + chr5.2:50518306-50518325 MS.gene73925:intron 30.0%
ACTGGTTACAAAATTCTTTG+GGG + chr5.2:50518981-50519000 MS.gene73925:CDS 30.0%
AGAAAATCATTAATCAGGCT+AGG + chr5.2:50520483-50520502 MS.gene73925:intron 30.0%
ATCAGAAAGGAATAAGTTGT+AGG + chr5.2:50519997-50520016 MS.gene73925:intron 30.0%
ATCCAAAGCTATACTCAAAA+AGG + chr5.2:50520730-50520749 MS.gene73925:CDS 30.0%
ATTTGTATTTGGGAATCTGA+AGG + chr5.2:50517742-50517761 MS.gene73925:CDS 30.0%
CATTATGTTGGCAAATTAAG+TGG + chr5.2:50520112-50520131 MS.gene73925:intron 30.0%
CGTATTCTATAACGATTCAT+TGG - chr5.2:50519376-50519395 None:intergenic 30.0%
CTTGGAAAACGAGAAAATTA+TGG + chr5.2:50519450-50519469 MS.gene73925:CDS 30.0%
GAAATTGTTGTGTCTGTATA+TGG - chr5.2:50520313-50520332 None:intergenic 30.0%
GACCTGTGTTGAAATTAATT+CGG + chr5.2:50518305-50518324 MS.gene73925:intron 30.0%
GAGTTATACCTAAAAACAAC+CGG - chr5.2:50518225-50518244 None:intergenic 30.0%
GATAAAATATCTTCTCCTGA+AGG + chr5.2:50520821-50520840 MS.gene73925:intron 30.0%
TAAGAACAAAACATACCATG+TGG + chr5.2:50518669-50518688 MS.gene73925:intron 30.0%
TAATCATGAATCTGTCATCT+TGG - chr5.2:50518539-50518558 None:intergenic 30.0%
TCAACAATCTTGAACAGTTT+AGG - chr5.2:50520397-50520416 None:intergenic 30.0%
TCATGTTATGTGTAGATACA+CGG + chr5.2:50518056-50518075 MS.gene73925:intron 30.0%
TCCAATAACAATGAAAAGTC+AGG - chr5.2:50519100-50519119 None:intergenic 30.0%
TGTGTCTGTATATGGTATAT+GGG - chr5.2:50520305-50520324 None:intergenic 30.0%
TGTTATCATCACGAAAATGA+AGG - chr5.2:50519495-50519514 None:intergenic 30.0%
TGTTATTGGAAAATCAGATC+CGG + chr5.2:50519110-50519129 MS.gene73925:intron 30.0%
TTCATCAGATCATTGTAAGT+GGG + chr5.2:50520941-50520960 MS.gene73925:CDS 30.0%
TTGTGTCTGTATATGGTATA+TGG - chr5.2:50520306-50520325 None:intergenic 30.0%
TTTCGTGACATGTATTAAGT+AGG + chr5.2:50520446-50520465 MS.gene73925:intron 30.0%
TTTGATTCTTCAGACATTTG+AGG + chr5.2:50518406-50518425 MS.gene73925:intron 30.0%
TTTGTGATCATCATGATTCA+TGG - chr5.2:50520857-50520876 None:intergenic 30.0%
! AAAAGGTTTCGAGATTTTGT+TGG + chr5.2:50520747-50520766 MS.gene73925:CDS 30.0%
! ATGAAGATTCAACATGGTTT+TGG + chr5.2:50517610-50517629 MS.gene73925:CDS 30.0%
! ATTTCTGACTTCCAACTTTT+AGG + chr5.2:50518903-50518922 MS.gene73925:intron 30.0%
! CACTGGTTACAAAATTCTTT+GGG + chr5.2:50518980-50518999 MS.gene73925:CDS 30.0%
! GATTATATGTTGGCTATATG+TGG + chr5.2:50518453-50518472 MS.gene73925:CDS 30.0%
! GGTTTAATTTATCAAATGGC+TGG + chr5.2:50519786-50519805 MS.gene73925:intron 30.0%
! GTAAGTAGTTTGCATTATGT+TGG + chr5.2:50520100-50520119 MS.gene73925:intron 30.0%
! TAAAAGACTTCAACTGATTC+AGG - chr5.2:50519865-50519884 None:intergenic 30.0%
! TATCCTCATTTTGTACTAAC+TGG - chr5.2:50520805-50520824 None:intergenic 30.0%
! TCACTGGTTACAAAATTCTT+TGG + chr5.2:50518979-50518998 MS.gene73925:CDS 30.0%
! TGAAATTAATTCGGGTGTTT+TGG + chr5.2:50518314-50518333 MS.gene73925:intron 30.0%
! TGAATGAGAAGAATTTTCCT+AGG + chr5.2:50517719-50517738 MS.gene73925:CDS 30.0%
! TGATTGCGTTCTATATTTTG+GGG + chr5.2:50520614-50520633 MS.gene73925:CDS 30.0%
! TTATATGTTGGCTATATGTG+GGG + chr5.2:50518455-50518474 MS.gene73925:CDS 30.0%
!! AAGCTTTTCCAATTTAGCTT+TGG - chr5.2:50519831-50519850 None:intergenic 30.0%
!! AATTATGGACTACAGTCTTT+TGG + chr5.2:50519465-50519484 MS.gene73925:CDS 30.0%
!! CATAGACGATTTGATTTGAA+AGG + chr5.2:50519175-50519194 MS.gene73925:CDS 30.0%
!! CTGGTCAAACTATTTCTAAA+GGG + chr5.2:50517896-50517915 MS.gene73925:CDS 30.0%
!! GATTTTGATCAATACACCAA+TGG + chr5.2:50520549-50520568 MS.gene73925:CDS 30.0%
!! GTGTCTTGTTGAATTTTACA+CGG + chr5.2:50518623-50518642 MS.gene73925:intron 30.0%
!! GTTGATGCTTAATTTGCAAT+TGG + chr5.2:50517933-50517952 MS.gene73925:CDS 30.0%
!! GTTTTGGATGATTTTTGGAT+TGG + chr5.2:50518330-50518349 MS.gene73925:intron 30.0%
!! TGATATTGTTGATAATGTCG+AGG + chr5.2:50517786-50517805 MS.gene73925:CDS 30.0%
!! TGATGCTTAATTTGCAATTG+GGG + chr5.2:50517935-50517954 MS.gene73925:CDS 30.0%
!! TGTCTTGTTGAATTTTACAC+GGG + chr5.2:50518624-50518643 MS.gene73925:intron 30.0%
!! TTAATTTGCAATTGGGGATT+AGG + chr5.2:50517941-50517960 MS.gene73925:CDS 30.0%
!!! AACCTTTTTGAGTATAGCTT+TGG - chr5.2:50520735-50520754 None:intergenic 30.0%
!!! TTAATGTTGATGTTTTGGTG+AGG + chr5.2:50518281-50518300 MS.gene73925:intron 30.0%
AAAGAACATGAACGCAAAGA+CGG - chr5.2:50520272-50520291 None:intergenic 35.0%
AACACTCACTATAGAGCATA+TGG + chr5.2:50519567-50519586 MS.gene73925:intron 35.0%
AAGAATCCTGATTGCCTAAA+AGG - chr5.2:50519636-50519655 None:intergenic 35.0%
AAGAATGGGAATGAGTATGT+TGG + chr5.2:50517481-50517500 MS.gene73925:CDS 35.0%
ACCCGAATTAATTTCAACAC+AGG - chr5.2:50518310-50518329 None:intergenic 35.0%
ACTTGCAACCAAAGCTAAAT+TGG + chr5.2:50519820-50519839 MS.gene73925:intron 35.0%
ACTTTCTGTTACTGTGTTTG+TGG + chr5.2:50520334-50520353 MS.gene73925:intron 35.0%
AGAATCCTGATTGCCTAAAA+GGG - chr5.2:50519635-50519654 None:intergenic 35.0%
AGCTAAATTGGAAAAGCTTC+AGG + chr5.2:50519832-50519851 MS.gene73925:intron 35.0%
ATACTACTGTTAGTGGTAGA+GGG + chr5.2:50517692-50517711 MS.gene73925:CDS 35.0%
ATAGCCAACATATAATCAGC+AGG - chr5.2:50518450-50518469 None:intergenic 35.0%
ATTTGAATCCTTATAGCAGC+GGG + chr5.2:50520583-50520602 MS.gene73925:CDS 35.0%
CACTATAGAGCATATGGTTA+TGG + chr5.2:50519573-50519592 MS.gene73925:intron 35.0%
CATGATGATCACAAAAATCC+AGG + chr5.2:50520862-50520881 MS.gene73925:CDS 35.0%
CATTTGAATCCTTATAGCAG+CGG + chr5.2:50520582-50520601 MS.gene73925:CDS 35.0%
CTAAATTGGAAAAGCTTCAG+GGG + chr5.2:50519834-50519853 MS.gene73925:intron 35.0%
CTTACAAAACCTAAGTTGTC+TGG - chr5.2:50518760-50518779 None:intergenic 35.0%
GAAACACATAGTTCAGATCA+AGG - chr5.2:50519267-50519286 None:intergenic 35.0%
GATTCCCAAATACAAATCCT+AGG - chr5.2:50517739-50517758 None:intergenic 35.0%
GATTTGAAAGGATCTTCACA+TGG + chr5.2:50519187-50519206 MS.gene73925:CDS 35.0%
GCTAAATTGGAAAAGCTTCA+GGG + chr5.2:50519833-50519852 MS.gene73925:intron 35.0%
GGTAAGAATCTACGTTTAAC+CGG - chr5.2:50518818-50518837 None:intergenic 35.0%
GTAAGAATCTACGTTTAACC+GGG - chr5.2:50518817-50518836 None:intergenic 35.0%
GTCCAAATATGAGAATTCAC+TGG + chr5.2:50518963-50518982 MS.gene73925:CDS 35.0%
GTTACGCAATTACAAGTCTT+TGG + chr5.2:50518851-50518870 MS.gene73925:intron 35.0%
GTTCATCAGATCATTGTAAG+TGG + chr5.2:50520940-50520959 MS.gene73925:CDS 35.0%
TCATCAGATCATTGTAAGTG+GGG + chr5.2:50520942-50520961 MS.gene73925:CDS 35.0%
TCCTTAGGATCAAAATCACT+AGG - chr5.2:50518117-50518136 None:intergenic 35.0%
TCTGTTGATACTACTGTTAG+TGG + chr5.2:50517685-50517704 MS.gene73925:CDS 35.0%
TGACCAGTTAGTACAAAATG+AGG + chr5.2:50520799-50520818 MS.gene73925:intron 35.0%
TGCAGGAAATAGTTGTTTGT+GGG + chr5.2:50520144-50520163 MS.gene73925:intron 35.0%
TGTTTCGTGTACAACGAAAT+TGG + chr5.2:50519281-50519300 MS.gene73925:CDS 35.0%
TTATGTGTAGATACACGGTT+GGG + chr5.2:50518061-50518080 MS.gene73925:intron 35.0%
TTCATAACACCTTGTCCTTT+CGG - chr5.2:50517595-50517614 None:intergenic 35.0%
TTGCAGGAAATAGTTGTTTG+TGG + chr5.2:50520143-50520162 MS.gene73925:intron 35.0%
TTTGATCAATACACCAATGG+TGG + chr5.2:50520552-50520571 MS.gene73925:CDS 35.0%
! AGTGAAGAAATCTGAAGTCA+AGG + chr5.2:50518563-50518582 MS.gene73925:CDS 35.0%
! ATCTATCGATCCATACCTTT+TGG - chr5.2:50519032-50519051 None:intergenic 35.0%
! CCTTTAGAAATAGTTTGACC+AGG - chr5.2:50517898-50517917 None:intergenic 35.0%
! GCCTGACTTTTCATTGTTAT+TGG + chr5.2:50519096-50519115 MS.gene73925:intron 35.0%
! GGTGTTATGAAGATTCAACA+TGG + chr5.2:50517604-50517623 MS.gene73925:CDS 35.0%
! GTTGAATTTTACACGGGTTT+GGG + chr5.2:50518630-50518649 MS.gene73925:intron 35.0%
! TGATCCTGCTGATTATATGT+TGG + chr5.2:50518443-50518462 MS.gene73925:CDS 35.0%
! TGCGTAACTTGCGTTATAAA+AGG - chr5.2:50518839-50518858 None:intergenic 35.0%
! TGGGGTTATCGATATTTTAC+AGG + chr5.2:50520632-50520651 MS.gene73925:CDS 35.0%
! TGTTGAATTTTACACGGGTT+TGG + chr5.2:50518629-50518648 MS.gene73925:intron 35.0%
! TTTTCGAAACTCATCAGGAT+CGG - chr5.2:50517842-50517861 None:intergenic 35.0%
!! ACAACTTAGGTTTTGTAAGG+AGG + chr5.2:50518761-50518780 MS.gene73925:intron 35.0%
!! ACCTAGTGATTTTGATCCTA+AGG + chr5.2:50518113-50518132 MS.gene73925:CDS 35.0%
!! CAGACAACTTAGGTTTTGTA+AGG + chr5.2:50518758-50518777 MS.gene73925:intron 35.0%
!! CCTGGTCAAACTATTTCTAA+AGG + chr5.2:50517895-50517914 MS.gene73925:CDS 35.0%
!! TTAAGTGGGTATAGTTTTGC+AGG + chr5.2:50520127-50520146 MS.gene73925:intron 35.0%
!!! AAGATTCAACATGGTTTTGG+TGG + chr5.2:50517613-50517632 MS.gene73925:CDS 35.0%
!!! AGATTCAACATGGTTTTGGT+GGG + chr5.2:50517614-50517633 MS.gene73925:CDS 35.0%
!!! ATTACTGTCCGGTTGTTTTT+AGG + chr5.2:50518214-50518233 MS.gene73925:CDS 35.0%
!!! CATGGCATTTTTTAACCTTC+AGG - chr5.2:50520839-50520858 None:intergenic 35.0%
AACAATGAAAAGTCAGGCAC+AGG - chr5.2:50519094-50519113 None:intergenic 40.0%
AACGGCGTTATATCTGGTAA+GGG + chr5.2:50517514-50517533 MS.gene73925:CDS 40.0%
AACGTTTCCTCATCAACACA+GGG - chr5.2:50517663-50517682 None:intergenic 40.0%
ACAATGAAAAGTCAGGCACA+GGG - chr5.2:50519093-50519112 None:intergenic 40.0%
ACCTCAGAAGAGAAACAACA+AGG - chr5.2:50517868-50517887 None:intergenic 40.0%
AGTTCAGATCAAGGTCTTTG+AGG - chr5.2:50519258-50519277 None:intergenic 40.0%
ATACCAGTGCGTAGAAGAAA+AGG - chr5.2:50519541-50519560 None:intergenic 40.0%
CAGATCCGGTTTATTGTGAT+GGG + chr5.2:50519124-50519143 MS.gene73925:intron 40.0%
CGAACGGTGATTTATACGAA+GGG + chr5.2:50517413-50517432 MS.gene73925:CDS 40.0%
CGATTTGACTAACAGTTGAC+TGG - chr5.2:50518729-50518748 None:intergenic 40.0%
CGCTGCTATAAGGATTCAAA+TGG - chr5.2:50520584-50520603 None:intergenic 40.0%
CTTTGCGTTCATGTTCTTTC+TGG + chr5.2:50520273-50520292 MS.gene73925:intron 40.0%
GAATCCTGATTGCCTAAAAG+GGG - chr5.2:50519634-50519653 None:intergenic 40.0%
GACGTTACGTTTGGAAGAAT+GGG + chr5.2:50517467-50517486 MS.gene73925:CDS 40.0%
GATACTACTGTTAGTGGTAG+AGG + chr5.2:50517691-50517710 MS.gene73925:CDS 40.0%
GATAGGGATCGAGTTAAATC+TGG + chr5.2:50519709-50519728 MS.gene73925:CDS 40.0%
GATTGCCCATCACAATAAAC+CGG - chr5.2:50519132-50519151 None:intergenic 40.0%
GTAATCTTGGATCCTTCACT+CGG - chr5.2:50518159-50518178 None:intergenic 40.0%
GTACATTGCGTGAAACCAAT+TGG + chr5.2:50519003-50519022 MS.gene73925:CDS 40.0%
GTTAGTAGACCAGACAACTT+AGG + chr5.2:50518748-50518767 MS.gene73925:intron 40.0%
GTTATGTGTAGATACACGGT+TGG + chr5.2:50518060-50518079 MS.gene73925:intron 40.0%
GTTCAGATCAAGGTCTTTGA+GGG - chr5.2:50519257-50519276 None:intergenic 40.0%
GTTTCATCAATCTCATCCTC+AGG - chr5.2:50519229-50519248 None:intergenic 40.0%
TAACGGCGTTATATCTGGTA+AGG + chr5.2:50517513-50517532 MS.gene73925:CDS 40.0%
TATATTAGGGCTTGTGCTGT+TGG + chr5.2:50519925-50519944 MS.gene73925:intron 40.0%
TCAGATCCGGTTTATTGTGA+TGG + chr5.2:50519123-50519142 MS.gene73925:intron 40.0%
TCGATGGAAAGATTACTGTC+CGG + chr5.2:50518203-50518222 MS.gene73925:CDS 40.0%
TGAAACCCACTTGCAAAAGA+GGG + chr5.2:50520902-50520921 MS.gene73925:CDS 40.0%
TGTACAACGAAATTGGTACC+AGG + chr5.2:50519288-50519307 MS.gene73925:CDS 40.0%
TGTGTTCCAGACAAATTGAG+CGG + chr5.2:50519416-50519435 MS.gene73925:intron 40.0%
TTGAAACCCACTTGCAAAAG+AGG + chr5.2:50520901-50520920 MS.gene73925:CDS 40.0%
TTGATCCTAAGGAGAAGTTC+TGG + chr5.2:50518124-50518143 MS.gene73925:CDS 40.0%
TTGTCGCTATTCGAATATCC+CGG + chr5.2:50518796-50518815 MS.gene73925:intron 40.0%
TTTGAATCCTTATAGCAGCG+GGG + chr5.2:50520584-50520603 MS.gene73925:CDS 40.0%
! ACATTTGAGGAAGCTGTTTC+AGG + chr5.2:50518419-50518438 MS.gene73925:CDS 40.0%
! CAGGGAAAGGGAAATTTTCA+TGG + chr5.2:50517251-50517270 MS.gene73925:CDS 40.0%
! GCGATATTCTTTCCCCTTTT+AGG + chr5.2:50519619-50519638 MS.gene73925:intron 40.0%
! GCTTCTATGTTTTATCGCGA+TGG + chr5.2:50517808-50517827 MS.gene73925:CDS 40.0%
! GGAATGAGTATGTTGGTGAA+TGG + chr5.2:50517488-50517507 MS.gene73925:CDS 40.0%
! GGATGTTTTCGAAACTCATC+AGG - chr5.2:50517847-50517866 None:intergenic 40.0%
! GGTTCGTTAGTTTGGGTTAA+CGG + chr5.2:50517535-50517554 MS.gene73925:CDS 40.0%
! TATGTTGGTGAATGGCGTAA+CGG + chr5.2:50517496-50517515 MS.gene73925:CDS 40.0%
! TGGTAAGGGTTCGTTAGTTT+GGG + chr5.2:50517528-50517547 MS.gene73925:CDS 40.0%
!! ATGGACTACAGTCTTTTGGT+TGG + chr5.2:50519469-50519488 MS.gene73925:CDS 40.0%
!! CCAACTTTTAGGTGCTTCTT+CGG + chr5.2:50518914-50518933 MS.gene73925:intron 40.0%
!! CGGGTGTTTTGGATGATTTT+TGG + chr5.2:50518325-50518344 MS.gene73925:intron 40.0%
!! GAAGGTTTGTTTTCCTTCTC+CGG - chr5.2:50517004-50517023 None:intergenic 40.0%
!! TCCTTGTTGTTTCTCTTCTG+AGG + chr5.2:50517864-50517883 MS.gene73925:CDS 40.0%
!! TTAGGTTTTGTAAGGAGGTC+TGG + chr5.2:50518766-50518785 MS.gene73925:intron 40.0%
!!! ATGGTTTTGGTGGGTTTGTT+TGG + chr5.2:50517623-50517642 MS.gene73925:CDS 40.0%
AAACCGTTTGGAGGGTTTGT+GGG + chr5.2:50517558-50517577 MS.gene73925:CDS 45.0%
AATGGTGTTCCGAAAGGACA+AGG + chr5.2:50517583-50517602 MS.gene73925:CDS 45.0%
ACAATCCCGCTCAATTTGTC+TGG - chr5.2:50519425-50519444 None:intergenic 45.0%
ACGGTGATTTATACGAAGGG+TGG + chr5.2:50517416-50517435 MS.gene73925:CDS 45.0%
ACGTTTCCTCATCAACACAG+GGG - chr5.2:50517662-50517681 None:intergenic 45.0%
AGATACTTCCCGGATCCATT+CGG - chr5.2:50517181-50517200 None:intergenic 45.0%
ATATGCCAGCAAGAGCAGAA+CGG + chr5.2:50520511-50520530 MS.gene73925:CDS 45.0%
ATCAAACCACGGAGTTTCGA+TGG + chr5.2:50518187-50518206 MS.gene73925:CDS 45.0%
ATCTTTCCATCGAAACTCCG+TGG - chr5.2:50518196-50518215 None:intergenic 45.0%
ATGGTCAAGGACGTTACGTT+TGG + chr5.2:50517458-50517477 MS.gene73925:CDS 45.0%
CAATTGGAGGCCAAAAGGTA+TGG + chr5.2:50519019-50519038 MS.gene73925:intron 45.0%
CATACTGAGAAGTTCATGCG+TGG + chr5.2:50519658-50519677 MS.gene73925:CDS 45.0%
CATTGCGTGAAACCAATTGG+AGG + chr5.2:50519006-50519025 MS.gene73925:CDS 45.0%
CGAAGCAGAGTTGCAAGATA+GGG + chr5.2:50519693-50519712 MS.gene73925:CDS 45.0%
CGTAACGTTCAAGATGGTCA+AGG + chr5.2:50517445-50517464 MS.gene73925:CDS 45.0%
CTCAACAACGGATCTACCAT+CGG - chr5.2:50517107-50517126 None:intergenic 45.0%
CTGGTAAGGGTTCGTTAGTT+TGG + chr5.2:50517527-50517546 MS.gene73925:CDS 45.0%
CTTAGAGAACTTTCCTCTCC+CGG + chr5.2:50518486-50518505 MS.gene73925:CDS 45.0%
CTTGTCCAGAACTTCTCCTT+AGG - chr5.2:50518132-50518151 None:intergenic 45.0%
GAAACCAATTGGAGGCCAAA+AGG + chr5.2:50519014-50519033 MS.gene73925:CDS 45.0%
GAACGTTTCCTCATCAACAC+AGG - chr5.2:50517664-50517683 None:intergenic 45.0%
GAAGAGCAACATTCCTGAAC+CGG + chr5.2:50516982-50517001 MS.gene73925:CDS 45.0%
GAAGGATTCGGAACATTCGT+TGG + chr5.2:50517319-50517338 MS.gene73925:CDS 45.0%
GCGAACGGTGATTTATACGA+AGG + chr5.2:50517412-50517431 MS.gene73925:CDS 45.0%
GGAAAACAAACCTTCTCCAC+CGG + chr5.2:50517009-50517028 MS.gene73925:CDS 45.0%
GGAAACGTGGAAAAGCTTCA+GGG + chr5.2:50517233-50517252 MS.gene73925:CDS 45.0%
GGACGTTACGTTTGGAAGAA+TGG + chr5.2:50517466-50517485 MS.gene73925:CDS 45.0%
GGGATCGAGTTAAATCTGGA+AGG + chr5.2:50519713-50519732 MS.gene73925:CDS 45.0%
GGTGAACGATGAAGTTGTTG+AGG + chr5.2:50516946-50516965 MS.gene73925:CDS 45.0%
GTGATTTATACGAAGGGTGG+TGG + chr5.2:50517419-50517438 MS.gene73925:CDS 45.0%
GTGGAAAAGCTTCAGGGAAA+GGG + chr5.2:50517239-50517258 MS.gene73925:CDS 45.0%
GTGTTCCAGACAAATTGAGC+GGG + chr5.2:50519417-50519436 MS.gene73925:intron 45.0%
GTTAACGGAAACCGTTTGGA+GGG + chr5.2:50517550-50517569 MS.gene73925:CDS 45.0%
GTTGCATGTACGAAGGTGAA+TGG + chr5.2:50517212-50517231 MS.gene73925:CDS 45.0%
TACGAAGGTGAATGGAAACG+TGG + chr5.2:50517220-50517239 MS.gene73925:CDS 45.0%
TCCGATAGAAAACACGGGTT+CGG + chr5.2:50517376-50517395 MS.gene73925:CDS 45.0%
TCGAAGCAGAGTTGCAAGAT+AGG + chr5.2:50519692-50519711 MS.gene73925:CDS 45.0%
TCGTGCAACAGATAAACCTG+AGG + chr5.2:50519210-50519229 MS.gene73925:CDS 45.0%
TGGAAACGTGGAAAAGCTTC+AGG + chr5.2:50517232-50517251 MS.gene73925:CDS 45.0%
TGGAGCTCCGATAGAAAACA+CGG + chr5.2:50517370-50517389 MS.gene73925:CDS 45.0%
TTACGAGGGAGAGTTCAAGT+CGG + chr5.2:50517288-50517307 MS.gene73925:CDS 45.0%
TTAGAGAACTTTCCTCTCCC+GGG + chr5.2:50518487-50518506 MS.gene73925:CDS 45.0%
TTCTGCTCTTGCTGGCATAT+TGG - chr5.2:50520511-50520530 None:intergenic 45.0%
TTGGGTTAACGGAAACCGTT+TGG + chr5.2:50517546-50517565 MS.gene73925:CDS 45.0%
TTTAAGCCGGCATGTGTTAC+AGG - chr5.2:50520023-50520042 None:intergenic 45.0%
! AAGGTCCCTCTTTTGCAAGT+GGG - chr5.2:50520910-50520929 None:intergenic 45.0%
! ACCGAACCCGTGTTTTCTAT+CGG - chr5.2:50517380-50517399 None:intergenic 45.0%
! CAAATGGCTGATTCCACCAT+TGG - chr5.2:50520568-50520587 None:intergenic 45.0%
! CATACCTTTTGGCCTCCAAT+TGG - chr5.2:50519021-50519040 None:intergenic 45.0%
! CTTTCCCCTTTTAGGCAATC+AGG + chr5.2:50519627-50519646 MS.gene73925:intron 45.0%
! GGGAAATTTTCATGGCCTTC+AGG + chr5.2:50517259-50517278 MS.gene73925:CDS 45.0%
! TAAGGTCCCTCTTTTGCAAG+TGG - chr5.2:50520911-50520930 None:intergenic 45.0%
! TCACCTTTTCTTCTACGCAC+TGG + chr5.2:50519535-50519554 MS.gene73925:CDS 45.0%
! TGGAAGCGTAACGTTCAAGA+TGG + chr5.2:50517439-50517458 MS.gene73925:CDS 45.0%
! TTGTTTTCCTTCTCCGGTTC+AGG - chr5.2:50516998-50517017 None:intergenic 45.0%
!! AAAACACTTCCGCTTTTCCC+GGG - chr5.2:50518507-50518526 None:intergenic 45.0%
!! ATGGATCCGGGAAGTATCTA+TGG + chr5.2:50517182-50517201 MS.gene73925:CDS 45.0%
!! ATTTTGCCCCTGTGTTGATG+AGG + chr5.2:50517653-50517672 MS.gene73925:CDS 45.0%
!! CCGAAGAAGCACCTAAAAGT+TGG - chr5.2:50518917-50518936 None:intergenic 45.0%
!! CGGAAGTACTCTCTCAACAA+CGG - chr5.2:50517119-50517138 None:intergenic 45.0%
!! CTAAGGAGAAGTTCTGGACA+AGG + chr5.2:50518130-50518149 MS.gene73925:CDS 45.0%
!! GAAAACACTTCCGCTTTTCC+CGG - chr5.2:50518508-50518527 None:intergenic 45.0%
!! GTTGAGAGAGTACTTCCGAA+CGG + chr5.2:50517121-50517140 MS.gene73925:CDS 45.0%
!! TCTTCTGAGGTTAAGAGACC+TGG + chr5.2:50517877-50517896 MS.gene73925:CDS 45.0%
AAACAAACCTTCTCCACCGG+CGG + chr5.2:50517012-50517031 MS.gene73925:CDS 50.0%
AACTCCGTGGTTTGATGAGG+CGG - chr5.2:50518183-50518202 None:intergenic 50.0%
AAGTCAGGCACAGGGAAACA+TGG - chr5.2:50519085-50519104 None:intergenic 50.0%
ACCTTCGTACATGCAACCGT+CGG - chr5.2:50517209-50517228 None:intergenic 50.0%
AGAGTTCAAGTCGGGTCGAA+TGG + chr5.2:50517297-50517316 MS.gene73925:CDS 50.0%
AGTCAGGCACAGGGAAACAT+GGG - chr5.2:50519084-50519103 None:intergenic 50.0%
CAACATTCCTGAACCGGAGA+AGG + chr5.2:50516988-50517007 MS.gene73925:CDS 50.0%
CGAAACTCCGTGGTTTGATG+AGG - chr5.2:50518186-50518205 None:intergenic 50.0%
CGTGGAAAAGCTTCAGGGAA+AGG + chr5.2:50517238-50517257 MS.gene73925:CDS 50.0%
GAAACCGTTTGGAGGGTTTG+TGG + chr5.2:50517557-50517576 MS.gene73925:CDS 50.0%
GGAACATTCGTTGGATCCGA+CGG + chr5.2:50517328-50517347 MS.gene73925:CDS 50.0%
GGAGCTCCGATAGAAAACAC+GGG + chr5.2:50517371-50517390 MS.gene73925:CDS 50.0%
GGTCAGAAACGTTACGCGAA+CGG + chr5.2:50517397-50517416 MS.gene73925:CDS 50.0%
GGTTAACGGAAACCGTTTGG+AGG + chr5.2:50517549-50517568 MS.gene73925:CDS 50.0%
GTCGGTCCATAGATACTTCC+CGG - chr5.2:50517191-50517210 None:intergenic 50.0%
GTCTACCACCTCCTTGTGAA+CGG - chr5.2:50517054-50517073 None:intergenic 50.0%
GTGATACATATCGCGGGTCA+TGG + chr5.2:50517350-50517369 MS.gene73925:CDS 50.0%
GTGTAGATACACGGTTGGGA+AGG + chr5.2:50518065-50518084 MS.gene73925:intron 50.0%
TACGAGGGAGAGTTCAAGTC+GGG + chr5.2:50517289-50517308 MS.gene73925:CDS 50.0%
TACGTTGCCGGAGAAACTTC+CGG - chr5.2:50517158-50517177 None:intergenic 50.0%
TCCGACGGTGATACATATCG+CGG + chr5.2:50517343-50517362 MS.gene73925:CDS 50.0%
TCGGGTCGAATGGAAGGATT+CGG + chr5.2:50517307-50517326 MS.gene73925:CDS 50.0%
TCTCCCACAAACCCTCCAAA+CGG - chr5.2:50517564-50517583 None:intergenic 50.0%
TGAGCGGGATTGTGAGTTCT+TGG + chr5.2:50519432-50519451 MS.gene73925:CDS 50.0%
TGGACAAGGTTTCCGAGTGA+AGG + chr5.2:50518144-50518163 MS.gene73925:CDS 50.0%
TGGCGTAACGGCGTTATATC+TGG + chr5.2:50517508-50517527 MS.gene73925:CDS 50.0%
TGGGAATCTGAAGGTGAAGC+TGG + chr5.2:50517751-50517770 MS.gene73925:CDS 50.0%
TGGGAGAATGGTGTTCCGAA+AGG + chr5.2:50517577-50517596 MS.gene73925:CDS 50.0%
TGTAGGCCTGTAACACATGC+CGG + chr5.2:50520014-50520033 MS.gene73925:intron 50.0%
TGTGGGACATATGCAAGCTG+TGG + chr5.2:50520161-50520180 MS.gene73925:intron 50.0%
TTCAAGTCGGGTCGAATGGA+AGG + chr5.2:50517301-50517320 MS.gene73925:CDS 50.0%
TTCTACGCCGGAAGTTTCTC+CGG + chr5.2:50517148-50517167 MS.gene73925:CDS 50.0%
TTGATGAGGCGGGGTAATCT+TGG - chr5.2:50518172-50518191 None:intergenic 50.0%
TTGGAGGGTTTGTGGGAGAA+TGG + chr5.2:50517565-50517584 MS.gene73925:CDS 50.0%
! CAGATCAAGGTCTTTGAGGG+TGG - chr5.2:50519254-50519273 None:intergenic 50.0%
!! GGGAAGTATCTATGGACCGA+CGG + chr5.2:50517190-50517209 MS.gene73925:CDS 50.0%
ACCGACGGTTGCATGTACGA+AGG + chr5.2:50517205-50517224 MS.gene73925:CDS 55.0%
ACTCCGTGGTTTGATGAGGC+GGG - chr5.2:50518182-50518201 None:intergenic 55.0%
AGAAGCCGTTCACAAGGAGG+TGG + chr5.2:50517046-50517065 MS.gene73925:CDS 55.0%
AGCTTCACGGTGGTTTCCGA+TGG + chr5.2:50517088-50517107 MS.gene73925:CDS 55.0%
AGTGACACCGACGAGCTTCA+CGG + chr5.2:50517075-50517094 MS.gene73925:CDS 55.0%
CAAGAGCAGAACGGTTGGCA+AGG + chr5.2:50520520-50520539 MS.gene73925:CDS 55.0%
CCCGCGATATGTATCACCGT+CGG - chr5.2:50517347-50517366 None:intergenic 55.0%
CCGAACGGAGATTTCTACGC+CGG + chr5.2:50517136-50517155 MS.gene73925:CDS 55.0%
CCGACGGTGATACATATCGC+GGG + chr5.2:50517344-50517363 MS.gene73925:CDS 55.0%
CCGGCGTAGAAATCTCCGTT+CGG - chr5.2:50517139-50517158 None:intergenic 55.0%
CTTCTTCCAGCAATCACCGC+CGG - chr5.2:50517031-50517050 None:intergenic 55.0%
CTTTCCTCTCCCGGGAAAAG+CGG + chr5.2:50518495-50518514 MS.gene73925:CDS 55.0%
GAAACCACCGTGAAGCTCGT+CGG - chr5.2:50517085-50517104 None:intergenic 55.0%
GAATCCTTATAGCAGCGGGG+AGG + chr5.2:50520587-50520606 MS.gene73925:CDS 55.0%
GCAACGTACCGAATGGATCC+GGG + chr5.2:50517170-50517189 MS.gene73925:CDS 55.0%
GCTGGAAGAAGCCGTTCACA+AGG + chr5.2:50517040-50517059 MS.gene73925:CDS 55.0%
GGAAGAAGCCGTTCACAAGG+AGG + chr5.2:50517043-50517062 MS.gene73925:CDS 55.0%
GGATCCATTCGGTACGTTGC+CGG - chr5.2:50517170-50517189 None:intergenic 55.0%
GGCAACGTACCGAATGGATC+CGG + chr5.2:50517169-50517188 MS.gene73925:CDS 55.0%
TAAGCCTCCCCGCTGCTATA+AGG - chr5.2:50520594-50520613 None:intergenic 55.0%
TACCCCGCCTCATCAAACCA+CGG + chr5.2:50518176-50518195 MS.gene73925:CDS 55.0%
TTCTCCGGCAACGTACCGAA+TGG + chr5.2:50517163-50517182 MS.gene73925:CDS 55.0%
CCTTCAGGCGCGACTTACGA+GGG + chr5.2:50517274-50517293 MS.gene73925:CDS 60.0%
CTCCGTGGTTTGATGAGGCG+GGG - chr5.2:50518181-50518200 None:intergenic 60.0%
GAGCAGAACGGTTGGCAAGG+AGG + chr5.2:50520523-50520542 MS.gene73925:CDS 60.0%
GCCAACCGTTCTGCTCTTGC+TGG - chr5.2:50520519-50520538 None:intergenic 60.0%
GCCAGCAAGAGCAGAACGGT+TGG + chr5.2:50520515-50520534 MS.gene73925:CDS 60.0%
!! ACTTCCGCTTTTCCCGGGAG+AGG - chr5.2:50518502-50518521 None:intergenic 60.0%
CCCTCGTAAGTCGCGCCTGA+AGG - chr5.2:50517277-50517296 None:intergenic 65.0%
CTTCCAGCAATCACCGCCGG+TGG - chr5.2:50517028-50517047 None:intergenic 65.0%
GACACCGACGAGCTTCACGG+TGG + chr5.2:50517078-50517097 MS.gene73925:CDS 65.0%
GCAATCACCGCCGGTGGAGA+AGG - chr5.2:50517022-50517041 None:intergenic 65.0%
GCCTTCAGGCGCGACTTACG+AGG + chr5.2:50517273-50517292 MS.gene73925:CDS 65.0%
TCTCCACCGGCGGTGATTGC+TGG + chr5.2:50517022-50517041 MS.gene73925:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 50516932 50520984 50516932 ID=MS.gene73925
chr5.2 mRNA 50516932 50520984 50516932 ID=MS.gene73925.t1;Parent=MS.gene73925
chr5.2 exon 50516932 50517962 50516932 ID=MS.gene73925.t1.exon1;Parent=MS.gene73925.t1
chr5.2 CDS 50516932 50517962 50516932 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50518071 50518235 50518071 ID=MS.gene73925.t1.exon2;Parent=MS.gene73925.t1
chr5.2 CDS 50518071 50518235 50518071 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50518419 50518584 50518419 ID=MS.gene73925.t1.exon3;Parent=MS.gene73925.t1
chr5.2 CDS 50518419 50518584 50518419 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50518925 50519035 50518925 ID=MS.gene73925.t1.exon4;Parent=MS.gene73925.t1
chr5.2 CDS 50518925 50519035 50518925 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50519127 50519320 50519127 ID=MS.gene73925.t1.exon5;Parent=MS.gene73925.t1
chr5.2 CDS 50519127 50519320 50519127 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50519426 50519556 50519426 ID=MS.gene73925.t1.exon6;Parent=MS.gene73925.t1
chr5.2 CDS 50519426 50519556 50519426 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50519641 50519734 50519641 ID=MS.gene73925.t1.exon7;Parent=MS.gene73925.t1
chr5.2 CDS 50519641 50519734 50519641 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50520485 50520790 50520485 ID=MS.gene73925.t1.exon8;Parent=MS.gene73925.t1
chr5.2 CDS 50520485 50520790 50520485 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
chr5.2 exon 50520843 50520984 50520843 ID=MS.gene73925.t1.exon9;Parent=MS.gene73925.t1
chr5.2 CDS 50520843 50520984 50520843 ID=cds.MS.gene73925.t1;Parent=MS.gene73925.t1
Gene Sequence

>MS.gene73925

ATGAGTGATACAGTGGTGAACGATGAAGTTGTTGAGGTTGTTAGTTCAACGAAGAGCAACATTCCTGAACCGGAGAAGGAAAACAAACCTTCTCCACCGGCGGTGATTGCTGGAAGAAGCCGTTCACAAGGAGGTGGTAGACGAGTGACACCGACGAGCTTCACGGTGGTTTCCGATGGTAGATCCGTTGTTGAGAGAGTACTTCCGAACGGAGATTTCTACGCCGGAAGTTTCTCCGGCAACGTACCGAATGGATCCGGGAAGTATCTATGGACCGACGGTTGCATGTACGAAGGTGAATGGAAACGTGGAAAAGCTTCAGGGAAAGGGAAATTTTCATGGCCTTCAGGCGCGACTTACGAGGGAGAGTTCAAGTCGGGTCGAATGGAAGGATTCGGAACATTCGTTGGATCCGACGGTGATACATATCGCGGGTCATGGAGCTCCGATAGAAAACACGGGTTCGGTCAGAAACGTTACGCGAACGGTGATTTATACGAAGGGTGGTGGAAGCGTAACGTTCAAGATGGTCAAGGACGTTACGTTTGGAAGAATGGGAATGAGTATGTTGGTGAATGGCGTAACGGCGTTATATCTGGTAAGGGTTCGTTAGTTTGGGTTAACGGAAACCGTTTGGAGGGTTTGTGGGAGAATGGTGTTCCGAAAGGACAAGGTGTTATGAAGATTCAACATGGTTTTGGTGGGTTTGTTTGGAATGACAATTTTGCCCCTGTGTTGATGAGGAAACGTTCTTCTGTTGATACTACTGTTAGTGGTAGAGGGAGTTTGAATGAGAAGAATTTTCCTAGGATTTGTATTTGGGAATCTGAAGGTGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTCGAGGCTTCTATGTTTTATCGCGATGGAACGTGTTCCGATCCTGATGAGTTTCGAAAACATCCTTGTTGTTTCTCTTCTGAGGTTAAGAGACCTGGTCAAACTATTTCTAAAGGGCATAAGAATTATGAGTTGATGCTTAATTTGCAATTGGGGATTAGGTAAATAAGAAACCCGTGTTTTGTTATTCTTATTGATTGTTATTGTTATTGTTGTTTTTGTGTTTGAGTTTGTTGTTTAATTAATTTAACTCGTCATGTTATGTGTAGATACACGGTTGGGAAGGAAGCGTCGAAGTTGCGAGAGCTTAAACCTAGTGATTTTGATCCTAAGGAGAAGTTCTGGACAAGGTTTCCGAGTGAAGGATCCAAGATTACCCCGCCTCATCAAACCACGGAGTTTCGATGGAAAGATTACTGTCCGGTTGTTTTTAGGTATAACTCTTTTTGTTGTTGAATTTGTATACATGTTTGTTTGTTTTAATGTTGATGTTTTGGTGAGGTGACCTGTGTTGAAATTAATTCGGGTGTTTTGGATGATTTTTGGATTGGAGTTGTTTAGCGTGTTGAAATTGTGTCTTGCTTTGATGTTGACTTTATTTTGCTTTGATTCTTCAGACATTTGAGGAAGCTGTTTCAGGTTGATCCTGCTGATTATATGTTGGCTATATGTGGGGATGATGCTCTTAGAGAACTTTCCTCTCCCGGGAAAAGCGGAAGTGTTTTCTACTTGACCCAAGATGACAGATTCATGATTAAGACAGTGAAGAAATCTGAAGTCAAGGTTAGATACATGTGTTGTATAGACTTTTGTTGAATTTTGTGTCTTGTTGAATTTTACACGGGTTTGGGTTTGACGATATAATGCTAAGAACAAAACATACCATGTGGAAAAATGATTATTTATCGTTGTTTTTTTCTTCTTCCAGTCAACTGTTAGTCAAATCGTTAGTAGACCAGACAACTTAGGTTTTGTAAGGAGGTCTGGTCTATCTTTGTCGCTATTCGAATATCCCGGTTAAACGTAGATTCTTACCTTTTATAACGCAAGTTACGCAATTACAAGTCTTTGGCTCGATTGTACTTGCATTGATGATGTGTTATTTCTGACTTCCAACTTTTAGGTGCTTCTTCGGATGCTTCGAAGCTATTACAAACACGTGTCCAAATATGAGAATTCACTGGTTACAAAATTCTTTGGGGTACATTGCGTGAAACCAATTGGAGGCCAAAAGGTATGGATCGATAGATATATTATTGTAGCTGTATGGAACGTTTGTCCCATGTTTCCCTGTGCCTGACTTTTCATTGTTATTGGAAAATCAGATCCGGTTTATTGTGATGGGCAATCTTTTCTGCTCTGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGTCGTGCAACAGATAAACCTGAGGATGAGATTGATGAAACAACCACCCTCAAAGACCTTGATCTGAACTATGTGTTTCGTGTACAACGAAATTGGTACCAGGATCTTATTAAGTAAGTTTTTGTGTTTGTTATATATATTTTTTTCTTTCTAGGCTGCATCTTACCAATGAATCGTTATAGAATACGTATCTGACAAGTTATGGTATTGTGTTCCAGACAAATTGAGCGGGATTGTGAGTTCTTGGAAAACGAGAAAATTATGGACTACAGTCTTTTGGTTGGCCTTCATTTTCGTGATGATAACACTTATGACAAAATGGGGTTGTCACCTTTTCTTCTACGCACTGGTATTGATCTAACACTCACTATAGAGCATATGGTTATGGTTTATGTTATGTAAATATTCAAAGCGATATTCTTTCCCCTTTTAGGCAATCAGGATTCTTATCATACTGAGAAGTTCATGCGTGGTTATCGCTTTCTCGAAGCAGAGTTGCAAGATAGGGATCGAGTTAAATCTGGAAGGTATGTCATGATCTGTTCTAGTTCCTTAAAATTAATGTAGATGGATATTTAGGTTTAATTTATCAAATGGCTGGGTTTTTAAATGACTTGCAACCAAAGCTAAATTGGAAAAGCTTCAGGGGTGTTTCCTGAATCAGTTGAAGTCTTTTATTAATCTCAGTAAAAATGAGAATGGTTTGTAATCTTGAGATATATTAGGGCTTGTGCTGTTGGTTGTGTTATAATACAAATATTATATATTATCTTGTCATCTCTTGAAAATATCAGAAAGGAATAAGTTGTAGGCCTGTAACACATGCCGGCTTAAATTCAAATTCTTTATTGGCATTAAAATTGGTTGATAATAATAATTCATGATAATAATTGTAAGTAGTTTGCATTATGTTGGCAAATTAAGTGGGTATAGTTTTGCAGGAAATAGTTGTTTGTGGGACATATGCAAGCTGTGGTCTTAATTCATTAGATTTAATTTGATTTCTAATATATTTTTGGCCTGACAATAAATTCATTGATTGCAATCATGTTTTATTCTTACCGTCTTTGCGTTCATGTTCTTTCTGGATTTTTCCCATATACCATATACAGACACAACAATTTCAACTTTCTGTTACTGTGTTTGTGGTTTGAAGATTCTGAATTTGCTACTATTTTGTTACACTCCTAAACTGTTCAAGATTGTTGATATTTTCTATATGAATTCATATTTGCAAATTTCGTGACATGTATTAAGTAGGATTCTTCTTTCTTCAGAAAATCATTAATCAGGCTAGGAGCCAATATGCCAGCAAGAGCAGAACGGTTGGCAAGGAGGAGTGATTTTGATCAATACACCAATGGTGGAATCAGCCATTTGAATCCTTATAGCAGCGGGGAGGCTTATGATTGCGTTCTATATTTTGGGGTTATCGATATTTTACAGGACTATGATATCAGCAAAAAGCTTGAGCATGCTTACAAGTCTTTGCAAGTTGACTCTACTTCAATTTCTGCTGTTGATCCAAAGCTATACTCAAAAAGGTTTCGAGATTTTGTTGGAAGAATATTCATTGAAGATTGGTAAGCAGTGACCAGTTAGTACAAAATGAGGATAAAATATCTTCTCCTGAAGGTTAAAAAATGCCATGAATCATGATGATCACAAAAATCCAGGAAAAATATTTGGAAGTTTGAAACCCACTTGCAAAAGAGGGACCTTAGAGTTTACTGTTCATCAGATCATTGTAAGTGGGGCCTCAAAGAATCTCACTTGA
Protein sequence

>MS.gene73925.t1

MSDTVVNDEVVEVVSSTKSNIPEPEKENKPSPPAVIAGRSRSQGGGRRVTPTSFTVVSDGRSVVERVLPNGDFYAGSFSGNVPNGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKHGFGQKRYANGDLYEGWWKRNVQDGQGRYVWKNGNEYVGEWRNGVISGKGSLVWVNGNRLEGLWENGVPKGQGVMKIQHGFGGFVWNDNFAPVLMRKRSSVDTTVSGRGSLNEKNFPRICIWESEGEAGDITCDIVDNVEASMFYRDGTCSDPDEFRKHPCCFSSEVKRPGQTISKGHKNYELMLNLQLGIRYTVGKEASKLRELKPSDFDPKEKFWTRFPSEGSKITPPHQTTEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSVFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYKHVSKYENSLVTKFFGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKPEDEIDETTTLKDLDLNYVFRVQRNWYQDLIKQIERDCEFLENEKIMDYSLLVGLHFRDDNTYDKMGLSPFLLRTGNQDSYHTEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERLARRSDFDQYTNGGISHLNPYSSGEAYDCVLYFGVIDILQDYDISKKLEHAYKSLQVDSTSISAVDPKLYSKRFRDFVGRIFIEDWLKNAMNHDDHKNPGKIFGSLKPTCKRGTLEFTVHQIIVSGASKNLT