Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031245.t1 | XP_003603630.2 | 99 | 836 | 6 | 2 | 1 | 835 | 1 | 835 | 0.00E+00 | 1645.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031245.t1 | Q39123 | 79.9 | 829 | 152 | 9 | 16 | 835 | 11 | 833 | 0.0e+00 | 1322.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031245.t1 | G7J3H4 | 99.0 | 836 | 6 | 2 | 1 | 835 | 1 | 835 | 0.0e+00 | 1645.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene031245.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031245 | MS.gene76534 | PPI |
| MS.gene36953 | MS.gene031245 | PPI |
| MS.gene031245 | MS.gene069869 | PPI |
| MS.gene031245 | MS.gene36776 | PPI |
| MS.gene031245 | MS.gene36819 | PPI |
| MS.gene031245 | MS.gene072254 | PPI |
| MS.gene031245 | MS.gene36352 | PPI |
| MS.gene031245 | MS.gene85150 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031245.t1 | MTR_3g109800 | 99.043 | 836 | 6 | 2 | 1 | 835 | 1 | 835 | 0.0 | 1712 |
| MS.gene031245.t1 | MTR_3g109800 | 98.985 | 788 | 6 | 2 | 1 | 787 | 1 | 787 | 0.0 | 1608 |
| MS.gene031245.t1 | MTR_2g101190 | 81.699 | 836 | 143 | 5 | 8 | 835 | 3 | 836 | 0.0 | 1438 |
| MS.gene031245.t1 | MTR_3g109800 | 98.725 | 706 | 7 | 2 | 1 | 705 | 1 | 705 | 0.0 | 1437 |
| MS.gene031245.t1 | MTR_8g013980 | 80.861 | 836 | 148 | 5 | 7 | 835 | 2 | 832 | 0.0 | 1430 |
| MS.gene031245.t1 | MTR_3g109800 | 98.824 | 595 | 6 | 1 | 241 | 835 | 1 | 594 | 0.0 | 1215 |
| MS.gene031245.t1 | MTR_2g030130 | 66.946 | 835 | 254 | 11 | 16 | 835 | 9 | 836 | 0.0 | 1157 |
| MS.gene031245.t1 | MTR_4g058970 | 65.259 | 829 | 273 | 8 | 16 | 835 | 24 | 846 | 0.0 | 1117 |
| MS.gene031245.t1 | MTR_2g094520 | 61.629 | 847 | 302 | 11 | 2 | 835 | 3 | 839 | 0.0 | 1051 |
| MS.gene031245.t1 | MTR_2g088470 | 23.916 | 669 | 345 | 25 | 20 | 590 | 70 | 672 | 3.19e-25 | 112 |
| MS.gene031245.t1 | MTR_8g432540 | 22.289 | 498 | 292 | 19 | 204 | 672 | 375 | 806 | 1.57e-12 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031245.t1 | AT4G32880 | 79.855 | 829 | 152 | 9 | 16 | 835 | 11 | 833 | 0.0 | 1377 |
| MS.gene031245.t1 | AT1G52150 | 78.648 | 843 | 164 | 7 | 2 | 835 | 1 | 836 | 0.0 | 1375 |
| MS.gene031245.t1 | AT1G52150 | 78.555 | 844 | 164 | 8 | 2 | 835 | 1 | 837 | 0.0 | 1370 |
| MS.gene031245.t1 | AT1G52150 | 78.113 | 795 | 158 | 7 | 2 | 787 | 1 | 788 | 0.0 | 1278 |
| MS.gene031245.t1 | AT2G34710 | 64.685 | 858 | 274 | 10 | 1 | 835 | 1 | 852 | 0.0 | 1106 |
| MS.gene031245.t1 | AT1G30490 | 62.692 | 847 | 281 | 10 | 9 | 835 | 10 | 841 | 0.0 | 1078 |
| MS.gene031245.t1 | AT5G60690 | 63.025 | 833 | 280 | 11 | 18 | 835 | 23 | 842 | 0.0 | 1058 |
| MS.gene031245.t1 | AT5G32670 | 62.162 | 74 | 28 | 0 | 284 | 357 | 37 | 110 | 5.75e-23 | 97.8 |
| MS.gene031245.t1 | AT1G79840 | 23.455 | 631 | 367 | 27 | 20 | 590 | 133 | 707 | 4.88e-22 | 102 |
| MS.gene031245.t1 | AT1G79840 | 23.455 | 631 | 367 | 27 | 20 | 590 | 46 | 620 | 6.03e-22 | 102 |
| MS.gene031245.t1 | AT1G79840 | 23.455 | 631 | 367 | 27 | 20 | 590 | 46 | 620 | 6.03e-22 | 102 |
| MS.gene031245.t1 | AT1G79840 | 23.455 | 631 | 367 | 27 | 20 | 590 | 104 | 678 | 9.21e-22 | 101 |
| MS.gene031245.t1 | AT1G79840 | 23.529 | 527 | 315 | 21 | 20 | 487 | 104 | 601 | 2.17e-20 | 96.7 |
| MS.gene031245.t1 | AT1G79840 | 23.664 | 393 | 236 | 14 | 20 | 363 | 104 | 481 | 1.27e-15 | 81.3 |
| MS.gene031245.t1 | AT3G03260 | 22.053 | 721 | 405 | 32 | 15 | 637 | 19 | 680 | 1.42e-13 | 75.1 |
| MS.gene031245.t1 | AT3G03260 | 22.822 | 482 | 251 | 21 | 15 | 400 | 19 | 475 | 1.28e-12 | 71.6 |
Find 217 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATACCTGCTGCATTATC+TGG | 0.179885 | 3.4:-95422822 | None:intergenic |
| GGTTCTGTGTTGCTCTTTAA+AGG | 0.201093 | 3.4:+95422499 | MS.gene031245:CDS |
| TTTAGGCTTTACGTCATTTA+AGG | 0.223191 | 3.4:+95420349 | MS.gene031245:intron |
| TATAAATATACCTTCTGTTC+TGG | 0.245843 | 3.4:-95417886 | None:intergenic |
| CGAGTAAGCGTTTGTGCTTC+AGG | 0.246753 | 3.4:-95422270 | None:intergenic |
| TGGCACCAGGTCGCGACTTC+TGG | 0.250399 | 3.4:+95419757 | MS.gene031245:CDS |
| CAAAGCTTCCATGTTGTTAC+AGG | 0.257668 | 3.4:+95420723 | MS.gene031245:CDS |
| ATGATCAACAATATGAATTA+TGG | 0.263716 | 3.4:-95420059 | None:intergenic |
| GCACTTTCCCCTTCGCGTTT+TGG | 0.273753 | 3.4:+95422213 | MS.gene031245:CDS |
| GCTACATGGACCAGCTTTAA+TGG | 0.282319 | 3.4:-95421168 | None:intergenic |
| GGGGCCCGAGCAGGAGCTTT+TGG | 0.283710 | 3.4:+95421197 | MS.gene031245:CDS |
| CTGCGAAGAGAAGTTGGTTT+TGG | 0.293313 | 3.4:-95417797 | None:intergenic |
| ACAGCTCTCTCATAAGTTAT+TGG | 0.294717 | 3.4:-95423069 | None:intergenic |
| GCTGCGCTACACATCACTTT+TGG | 0.327871 | 3.4:+95419782 | MS.gene031245:CDS |
| CTAAAATACTTACTTGTAAG+AGG | 0.330219 | 3.4:-95421479 | None:intergenic |
| TAACCTTCATCCCGGGCATT+TGG | 0.334513 | 3.4:-95418774 | None:intergenic |
| AGCAATGAACAAACTGCTTA+TGG | 0.337413 | 3.4:+95418062 | MS.gene031245:CDS |
| TCTGTTTCATGTTCATCAAT+TGG | 0.338860 | 3.4:+95423133 | MS.gene031245:CDS |
| ACGAAAACCAGAAGGCAAAA+TGG | 0.343351 | 3.4:-95421834 | None:intergenic |
| AACCTAAACAGATCAAAGTT+TGG | 0.353061 | 3.4:+95417861 | MS.gene031245:CDS |
| CCAAGGGATGCAAGCCCTGC+TGG | 0.354906 | 3.4:+95418500 | MS.gene031245:CDS |
| GCACTTGAGGTTGGAACCAC+TGG | 0.370337 | 3.4:+95422027 | MS.gene031245:CDS |
| TAAAGTGGGCGCAAAACTTC+AGG | 0.378668 | 3.4:-95420194 | None:intergenic |
| AACCAAACTTTGATCTGTTT+AGG | 0.378767 | 3.4:-95417863 | None:intergenic |
| AATGTTATGTCCACAGGAAA+TGG | 0.379586 | 3.4:+95419564 | MS.gene031245:CDS |
| TCAAGTGCTTCCACTTGCTC+TGG | 0.381079 | 3.4:-95417755 | None:intergenic |
| TTGAGAACATGGGCTACTAT+AGG | 0.388073 | 3.4:+95421427 | MS.gene031245:CDS |
| AGGAAGTTAATTACCCTTGC+AGG | 0.390715 | 3.4:-95419395 | None:intergenic |
| AGGATGATGGCAGTGAGTTC+AGG | 0.392334 | 3.4:+95417677 | None:intergenic |
| CCAGCAGGGCTTGCATCCCT+TGG | 0.392669 | 3.4:-95418500 | None:intergenic |
| CAGGCACGTGCAGCCACTCC+AGG | 0.395142 | 3.4:-95419353 | None:intergenic |
| CGACCTGGTGCCAGAGTTGT+TGG | 0.396680 | 3.4:-95419747 | None:intergenic |
| AAAGCTCCTGCTCGGGCCCC+TGG | 0.404062 | 3.4:-95421194 | None:intergenic |
| TGAGAACATGGGCTACTATA+GGG | 0.407729 | 3.4:+95421428 | MS.gene031245:CDS |
| CTTGCTTCTGCACTTGAGGT+TGG | 0.412761 | 3.4:+95422018 | MS.gene031245:CDS |
| GGGTGACAATTCAGGTCATT+CGG | 0.414286 | 3.4:+95422062 | MS.gene031245:CDS |
| CAGGGTTTCATGTGTATTCA+AGG | 0.417991 | 3.4:+95423018 | MS.gene031245:intron |
| GTTGAGTGGGTCCAAATGCC+CGG | 0.418997 | 3.4:+95418763 | MS.gene031245:CDS |
| TCAGAGAAAGATGCATCAAT+TGG | 0.421642 | 3.4:-95421803 | None:intergenic |
| GCTGGTCCATGTAGCTTGCC+AGG | 0.423708 | 3.4:+95421176 | MS.gene031245:CDS |
| CTTCCCCATCCTGTCACACT+TGG | 0.428131 | 3.4:-95420396 | None:intergenic |
| TTTACGTTTGCGAATCAAGC+TGG | 0.434930 | 3.4:+95422700 | MS.gene031245:CDS |
| GGTGACAATTCAGGTCATTC+GGG | 0.437203 | 3.4:+95422063 | MS.gene031245:CDS |
| CGAAAACCAGAAGGCAAAAT+GGG | 0.440093 | 3.4:-95421833 | None:intergenic |
| GCACGTGCCTGCGGCCTCGT+GGG | 0.440499 | 3.4:+95419365 | MS.gene031245:CDS |
| AATCGATACTTAAATCCCTT+TGG | 0.442177 | 3.4:+95422462 | MS.gene031245:CDS |
| AGCTTGCCAGGGGCCCGAGC+AGG | 0.444554 | 3.4:+95421188 | MS.gene031245:CDS |
| GTTTGTGCTTCAGGAGTTCC+AGG | 0.444785 | 3.4:-95422261 | None:intergenic |
| CGATCTTGCTTCTGCACTTG+AGG | 0.446890 | 3.4:+95422014 | MS.gene031245:CDS |
| GGTGGATCTGTAACAGCTAT+AGG | 0.449783 | 3.4:+95422292 | MS.gene031245:CDS |
| ACCACCAAAAGCTCCTGCTC+GGG | 0.452836 | 3.4:-95421201 | None:intergenic |
| CATTGAATTGCTTTACATGC+AGG | 0.453193 | 3.4:+95419593 | MS.gene031245:CDS |
| ACCATGAGAGCCTATCTTTG+AGG | 0.453750 | 3.4:-95419512 | None:intergenic |
| CTGCGATATTATCTTGAAGA+TGG | 0.455006 | 3.4:-95422134 | None:intergenic |
| CTGTAACAACATGGAAGCTT+TGG | 0.455633 | 3.4:-95420722 | None:intergenic |
| CGGGCCCCTGGCAAGCTACA+TGG | 0.457289 | 3.4:-95421182 | None:intergenic |
| GAAGGTTACAAGCTGTGAAC+AGG | 0.458532 | 3.4:+95418031 | MS.gene031245:CDS |
| GCAGGGCTTGCATCCCTTGG+TGG | 0.461144 | 3.4:-95418497 | None:intergenic |
| GACCACCAAAAGCTCCTGCT+CGG | 0.462737 | 3.4:-95421202 | None:intergenic |
| GCTTGCTCAGAGAACAACTA+TGG | 0.463260 | 3.4:+95420232 | MS.gene031245:CDS |
| GGTTATCAAGCTTGAGAACA+TGG | 0.465661 | 3.4:+95421416 | MS.gene031245:CDS |
| CTATACCTGCTGCATTATCT+GGG | 0.466306 | 3.4:-95422821 | None:intergenic |
| GCAATTTCTCATGGTTCCCC+TGG | 0.467349 | 3.4:+95419335 | MS.gene031245:CDS |
| TTGCTGAAATCCTCAAAGAT+AGG | 0.468317 | 3.4:+95419502 | MS.gene031245:CDS |
| GATTCAACGAAGCTGTCAAC+GGG | 0.469615 | 3.4:+95420551 | MS.gene031245:CDS |
| TTCATCACCTAGCAAGATGA+TGG | 0.470764 | 3.4:+95420639 | MS.gene031245:CDS |
| GATGGGCTTCAAATGCAAAC+TGG | 0.472343 | 3.4:-95422116 | None:intergenic |
| CATCTTCCTCAGCTTTGTAG+TGG | 0.473433 | 3.4:+95421734 | MS.gene031245:intron |
| GAGTTTCTATCAAAGGCTAC+TGG | 0.476434 | 3.4:+95418733 | MS.gene031245:CDS |
| TTCTCATGGTTCCCCTGGAG+TGG | 0.477241 | 3.4:+95419340 | MS.gene031245:CDS |
| CTCAGCCAAGTGTGACAGGA+TGG | 0.477876 | 3.4:+95420391 | MS.gene031245:CDS |
| TGCACGTGCCTGCGGCCTCG+TGG | 0.486826 | 3.4:+95419364 | MS.gene031245:CDS |
| TAGCCTGGTCCGGATTCCAT+TGG | 0.487508 | 3.4:+95419305 | MS.gene031245:intron |
| TGGTATTTGTTTATCCAGCA+TGG | 0.488354 | 3.4:+95423041 | MS.gene031245:CDS |
| GTTTCTCAGCCAAGTGTGAC+AGG | 0.488578 | 3.4:+95420387 | MS.gene031245:CDS |
| GGTTCAATATGAGAGAGAAT+AGG | 0.490102 | 3.4:-95417842 | None:intergenic |
| CAGCCAAGTGTGACAGGATG+GGG | 0.491303 | 3.4:+95420393 | MS.gene031245:CDS |
| GCTCTAACAAAATGCGGCAC+TGG | 0.492687 | 3.4:-95419986 | None:intergenic |
| GGTCCAAATGCCCGGGATGA+AGG | 0.494227 | 3.4:+95418771 | MS.gene031245:CDS |
| GCGGGAACACAGATCAGAAT+GGG | 0.495304 | 3.4:+95421112 | MS.gene031245:CDS |
| GGTATTTGTTTATCCAGCAT+GGG | 0.496206 | 3.4:+95423042 | MS.gene031245:CDS |
| TTTAGCAGAGTTTCTATCAA+AGG | 0.497850 | 3.4:+95418726 | MS.gene031245:CDS |
| ATTCCAATGGAATCCGGACC+AGG | 0.499148 | 3.4:-95419308 | None:intergenic |
| CATTTAGAACATCCACAGTT+CGG | 0.500936 | 3.4:-95419545 | None:intergenic |
| TGCGGCACTGGAGGCATACT+AGG | 0.502619 | 3.4:-95419974 | None:intergenic |
| TGCGATATTATCTTGAAGAT+GGG | 0.503723 | 3.4:-95422133 | None:intergenic |
| AGTTATTGGCCTCCCCATGC+TGG | 0.504544 | 3.4:-95423055 | None:intergenic |
| TACTGGAACCGCTGTTGAGT+GGG | 0.504776 | 3.4:+95418750 | MS.gene031245:CDS |
| GTTCTAAATGTTATGTCCAC+AGG | 0.505259 | 3.4:+95419558 | MS.gene031245:CDS |
| GAGAAGCAGAGGAAAGAAGC+TGG | 0.505430 | 3.4:+95418009 | MS.gene031245:CDS |
| AAGATGATGGGACTAAATCT+TGG | 0.505856 | 3.4:+95420652 | MS.gene031245:CDS |
| GCAACGATTCCAATGGAATC+CGG | 0.506436 | 3.4:-95419314 | None:intergenic |
| CTAAGCGCACGTAGAGCTGC+AGG | 0.508511 | 3.4:-95420423 | None:intergenic |
| TTTGGCACATAGCACAGAAC+TGG | 0.509436 | 3.4:-95420704 | None:intergenic |
| CTAAATCTTGGTTATAACAA+TGG | 0.512081 | 3.4:+95420664 | MS.gene031245:CDS |
| AGGGATGATATTACAATGCC+TGG | 0.513022 | 3.4:+95421447 | MS.gene031245:CDS |
| GGAACCACTGGAAACAAAGC+AGG | 0.514125 | 3.4:+95422039 | MS.gene031245:CDS |
| GTGAGTTCAGGATGCAAAGA+TGG | 0.514612 | 3.4:+95417689 | MS.gene031245:CDS |
| TCCTCAGCTTTGTAGTGGAG+TGG | 0.515145 | 3.4:+95421739 | MS.gene031245:intron |
| CTGAAGCACAAACGCTTACT+CGG | 0.516996 | 3.4:+95422271 | MS.gene031245:CDS |
| TCCTCAAAGATAGGCTCTCA+TGG | 0.518370 | 3.4:+95419511 | MS.gene031245:CDS |
| TCGTGGGTCTTGAACCTGCA+AGG | 0.518555 | 3.4:+95419381 | MS.gene031245:CDS |
| TCAGCAGCTGCCATTAAAGC+TGG | 0.518942 | 3.4:+95421158 | MS.gene031245:CDS |
| GCAAGATCGAGTGTGCGGTT+AGG | 0.519277 | 3.4:-95422000 | None:intergenic |
| GGAATCGTTGCAATTTCTCA+TGG | 0.524738 | 3.4:+95419326 | MS.gene031245:CDS |
| TTTAGTCCCATCATCTTGCT+AGG | 0.525629 | 3.4:-95420646 | None:intergenic |
| AACTCGTGTCCGTAGTGGCA+AGG | 0.527560 | 3.4:-95418442 | None:intergenic |
| TGTTGCCTGCGAAGAGAAGT+TGG | 0.527712 | 3.4:-95417803 | None:intergenic |
| CGCATCTGAGTGATGCCAAA+GGG | 0.530194 | 3.4:-95422477 | None:intergenic |
| GTTGTATGCGCCAACAACTC+TGG | 0.530549 | 3.4:+95419737 | MS.gene031245:intron |
| TGCGGGAACACAGATCAGAA+TGG | 0.530863 | 3.4:+95421111 | MS.gene031245:CDS |
| CAAAACCAACTTCTCTTCGC+AGG | 0.532329 | 3.4:+95417798 | MS.gene031245:CDS |
| GAAAAGATATTTGATGACAA+TGG | 0.533386 | 3.4:+95422772 | MS.gene031245:CDS |
| TCACTTAACAACACACAGAA+TGG | 0.537141 | 3.4:+95419950 | MS.gene031245:CDS |
| CTGGTCCATGTAGCTTGCCA+GGG | 0.538428 | 3.4:+95421177 | MS.gene031245:CDS |
| CTGCATGTAAAGCAATTCAA+TGG | 0.540926 | 3.4:-95419592 | None:intergenic |
| AGCAACCAGAAGTCGCGACC+TGG | 0.542154 | 3.4:-95419762 | None:intergenic |
| TCAGCCAAGTGTGACAGGAT+GGG | 0.542398 | 3.4:+95420392 | MS.gene031245:CDS |
| TCAAGATAATATCGCAGCTA+TGG | 0.544488 | 3.4:+95422140 | MS.gene031245:CDS |
| CAAGGGATGCAAGCCCTGCT+GGG | 0.545537 | 3.4:+95418501 | MS.gene031245:CDS |
| TGCTCAATTGTGTGAGCTAG+TGG | 0.546269 | 3.4:-95421236 | None:intergenic |
| TGATGTCTTGAAGTGCAACC+AGG | 0.546715 | 3.4:-95422744 | None:intergenic |
| CTGATTAGACCCTGTGAAGG+AGG | 0.548637 | 3.4:+95420031 | MS.gene031245:CDS |
| GTCAACGGGTTTACAGATGA+TGG | 0.550490 | 3.4:+95420565 | MS.gene031245:CDS |
| TGATTAGACCCTGTGAAGGA+GGG | 0.553128 | 3.4:+95420032 | MS.gene031245:CDS |
| TTCAAGACCCACGAGGCCGC+AGG | 0.553773 | 3.4:-95419372 | None:intergenic |
| ACAGACGACCCTTGCCACTA+CGG | 0.558722 | 3.4:+95418433 | MS.gene031245:intron |
| TATTTGATGACTTACCCAGC+AGG | 0.561038 | 3.4:-95418515 | None:intergenic |
| TGCTAAAGTCTCCTCTGCAA+TGG | 0.562754 | 3.4:-95418710 | None:intergenic |
| GTATTTGTTTATCCAGCATG+GGG | 0.564375 | 3.4:+95423043 | MS.gene031245:CDS |
| GTCCTTGTAGAATGTCCCTC+CGG | 0.565212 | 3.4:+95421070 | MS.gene031245:intron |
| AGCATGGATGACTCATAAAG+TGG | 0.566145 | 3.4:-95420209 | None:intergenic |
| TTTGGAGGATGGCAGTCTTG+TGG | 0.566818 | 3.4:+95419800 | MS.gene031245:CDS |
| GCAGAACTACTTAAATGTGA+AGG | 0.568295 | 3.4:+95422434 | MS.gene031245:CDS |
| AGGGTAATTAACCTTCATCC+CGG | 0.569520 | 3.4:-95418782 | None:intergenic |
| AAGTTTGGTTCCAGAACAGA+AGG | 0.569991 | 3.4:+95417876 | MS.gene031245:CDS |
| TCTGAGAACCAAAACGCGAA+GGG | 0.570540 | 3.4:-95422221 | None:intergenic |
| AATGGTTCCTCCATTTCCTG+TGG | 0.571463 | 3.4:-95419574 | None:intergenic |
| GATTAGACCCTGTGAAGGAG+GGG | 0.573104 | 3.4:+95420033 | MS.gene031245:CDS |
| AGAAATTGCAACGATTCCAA+TGG | 0.574191 | 3.4:-95419321 | None:intergenic |
| ACTCGTGTCCGTAGTGGCAA+GGG | 0.576336 | 3.4:-95418441 | None:intergenic |
| GCAGGTGCAGAGAGAAGCAG+AGG | 0.578902 | 3.4:+95417998 | MS.gene031245:intron |
| AAAACTTCAGGCACACTCCA+AGG | 0.579548 | 3.4:-95420182 | None:intergenic |
| AGGCACGTGCAGCCACTCCA+GGG | 0.585841 | 3.4:-95419352 | None:intergenic |
| CTACTGGAACCGCTGTTGAG+TGG | 0.586215 | 3.4:+95418749 | MS.gene031245:CDS |
| TTCTGAGAACCAAAACGCGA+AGG | 0.588476 | 3.4:-95422222 | None:intergenic |
| AAGGTACACACCAGAGCAAG+TGG | 0.590467 | 3.4:+95417745 | MS.gene031245:CDS |
| CTAACAAAATGCGGCACTGG+AGG | 0.590611 | 3.4:-95419983 | None:intergenic |
| TGGTCTATGTTAGATAGTGA+TGG | 0.594042 | 3.4:+95420589 | MS.gene031245:CDS |
| GTGTGACAGGATGGGGAAGG+CGG | 0.594930 | 3.4:+95420400 | MS.gene031245:CDS |
| TGGACAATGGAAAGTACGTA+AGG | 0.595746 | 3.4:+95417726 | MS.gene031245:CDS |
| TGGTCCATGTAGCTTGCCAG+GGG | 0.596219 | 3.4:+95421178 | MS.gene031245:CDS |
| CTTATGAGAGAGCTGTAGCA+TGG | 0.596800 | 3.4:+95423076 | MS.gene031245:CDS |
| GCGCCAACAACTCTGGCACC+AGG | 0.600039 | 3.4:+95419744 | MS.gene031245:CDS |
| CGTGGGTCTTGAACCTGCAA+GGG | 0.600458 | 3.4:+95419382 | MS.gene031245:CDS |
| TTGAGTGGGTCCAAATGCCC+GGG | 0.600560 | 3.4:+95418764 | MS.gene031245:CDS |
| GGATTCAACGAAGCTGTCAA+CGG | 0.601339 | 3.4:+95420550 | MS.gene031245:CDS |
| CAGAACTACTTAAATGTGAA+GGG | 0.602255 | 3.4:+95422435 | MS.gene031245:CDS |
| ACAGAACTGGTGGTGACAGA+TGG | 0.602468 | 3.4:-95420691 | None:intergenic |
| GGGTAATTAACCTTCATCCC+GGG | 0.604192 | 3.4:-95418781 | None:intergenic |
| TCATCACCTAGCAAGATGAT+GGG | 0.607665 | 3.4:+95420640 | MS.gene031245:CDS |
| TTTGTTTATCCAGCATGGGG+AGG | 0.608499 | 3.4:+95423046 | MS.gene031245:CDS |
| GTTATGTCCACAGGAAATGG+AGG | 0.608625 | 3.4:+95419567 | MS.gene031245:CDS |
| GCATGGATGACTCATAAAGT+GGG | 0.609344 | 3.4:-95420208 | None:intergenic |
| AGCAAGATAGCAATGGACAA+TGG | 0.610868 | 3.4:+95417713 | MS.gene031245:CDS |
| AGCAGAGGAAAGAAGCTGGA+AGG | 0.615005 | 3.4:+95418013 | MS.gene031245:CDS |
| GGAGTGGCTGCACGTGCCTG+CGG | 0.616801 | 3.4:+95419356 | MS.gene031245:CDS |
| ATTAGACCCTGTGAAGGAGG+GGG | 0.617333 | 3.4:+95420034 | MS.gene031245:CDS |
| GGAGTGGACGAGCATGCAGT+TGG | 0.618690 | 3.4:+95421755 | MS.gene031245:CDS |
| ATTTGATGACTTACCCAGCA+GGG | 0.619457 | 3.4:-95418514 | None:intergenic |
| AGATGGTAGCAAGATAGCAA+TGG | 0.621096 | 3.4:+95417706 | MS.gene031245:CDS |
| AGGTGATGAATTCACAAGAA+GGG | 0.622669 | 3.4:-95420626 | None:intergenic |
| CATACCTCTTGAATCTAGCA+CGG | 0.625244 | 3.4:+95421859 | MS.gene031245:CDS |
| CTCACAACTCGTGTCCGTAG+TGG | 0.627252 | 3.4:-95418447 | None:intergenic |
| GGCACATAGCACAGAACTGG+TGG | 0.630842 | 3.4:-95420701 | None:intergenic |
| CGGTCAGCAGCATCCACCAA+GGG | 0.631326 | 3.4:+95418484 | MS.gene031245:CDS |
| TAGGTGATGAATTCACAAGA+AGG | 0.633200 | 3.4:-95420627 | None:intergenic |
| GGCACGTGCAGCCACTCCAG+GGG | 0.635325 | 3.4:-95419351 | None:intergenic |
| AATGAACAAACTGCTTATGG+AGG | 0.636215 | 3.4:+95418065 | MS.gene031245:CDS |
| ATCTAAGAAGAATAGCCGGA+GGG | 0.640469 | 3.4:-95421085 | None:intergenic |
| CCGCATCTGAGTGATGCCAA+AGG | 0.646305 | 3.4:-95422478 | None:intergenic |
| ACGGGTTTACAGATGATGGA+TGG | 0.646531 | 3.4:+95420569 | MS.gene031245:CDS |
| CTGAGAACCAAAACGCGAAG+GGG | 0.646857 | 3.4:-95422220 | None:intergenic |
| TGTTCTCTGAGCAAGCAGCA+TGG | 0.647938 | 3.4:-95420225 | None:intergenic |
| ATACCTGCTGCATTATCTGG+GGG | 0.648878 | 3.4:-95422819 | None:intergenic |
| GTTATCAAGCTTGAGAACAT+GGG | 0.649916 | 3.4:+95421417 | MS.gene031245:CDS |
| TATACCTGCTGCATTATCTG+GGG | 0.653102 | 3.4:-95422820 | None:intergenic |
| CAAGTGTGACAGGATGGGGA+AGG | 0.654511 | 3.4:+95420397 | MS.gene031245:CDS |
| TGTAAGAGGAAAATATCACC+AGG | 0.656562 | 3.4:-95421465 | None:intergenic |
| CTTGCCGTGCTAGATTCAAG+AGG | 0.658066 | 3.4:-95421863 | None:intergenic |
| ACTTCAGCTCTAACAAAATG+CGG | 0.660310 | 3.4:-95419992 | None:intergenic |
| GGACACGAGTTGTGAGTCAG+TGG | 0.661062 | 3.4:+95418454 | MS.gene031245:CDS |
| GATGTCTTGAAGTGCAACCA+GGG | 0.661753 | 3.4:-95422743 | None:intergenic |
| TCACACAATTGAGCACGAAG+AGG | 0.662824 | 3.4:+95421244 | MS.gene031245:CDS |
| GAACCACTGGAAACAAAGCA+GGG | 0.663545 | 3.4:+95422040 | MS.gene031245:CDS |
| GCGGTCAGCAGCATCCACCA+AGG | 0.664352 | 3.4:+95418483 | MS.gene031245:CDS |
| GGTATGATACGAAAACCAGA+AGG | 0.665928 | 3.4:-95421842 | None:intergenic |
| GGTCTAATCAGATAACCGCT+AGG | 0.667041 | 3.4:-95420019 | None:intergenic |
| AATCTAAGAAGAATAGCCGG+AGG | 0.667152 | 3.4:-95421086 | None:intergenic |
| CCTTTGGCATCACTCAGATG+CGG | 0.670379 | 3.4:+95422478 | MS.gene031245:CDS |
| TTCTGTAATACAGTTCATGG+AGG | 0.670808 | 3.4:+95421395 | MS.gene031245:intron |
| TATCTGATTAGACCCTGTGA+AGG | 0.676545 | 3.4:+95420028 | MS.gene031245:CDS |
| GAATTATACCTGTAACAACA+TGG | 0.676552 | 3.4:-95420731 | None:intergenic |
| TGTGAGTCAGTGGTAACAAG+CGG | 0.679277 | 3.4:+95418464 | MS.gene031245:CDS |
| AAGCACAAACGCTTACTCGG+TGG | 0.679968 | 3.4:+95422274 | MS.gene031245:CDS |
| CAGAAGCAAGATCGAGTGTG+CGG | 0.682497 | 3.4:-95422005 | None:intergenic |
| GTATCGTGATTGCCGAACTG+TGG | 0.685847 | 3.4:+95419533 | MS.gene031245:CDS |
| AAAACGTGTTCTCATACACA+AGG | 0.688378 | 3.4:-95418119 | None:intergenic |
| ACCACTGGAAACAAAGCAGG+GGG | 0.697026 | 3.4:+95422042 | MS.gene031245:CDS |
| TGTGCTTCAGGAGTTCCAGG+TGG | 0.700188 | 3.4:-95422258 | None:intergenic |
| CATTTGGACCCACTCAACAG+CGG | 0.704277 | 3.4:-95418758 | None:intergenic |
| TGACATGCTTGAAACCACCC+TGG | 0.704585 | 3.4:+95422726 | MS.gene031245:CDS |
| GGTTTCATGTGTATTCAAGG+TGG | 0.704702 | 3.4:+95423021 | MS.gene031245:CDS |
| AACCACTGGAAACAAAGCAG+GGG | 0.710996 | 3.4:+95422041 | MS.gene031245:CDS |
| AGAGCTGAAGTGTTGCCTAG+CGG | 0.716290 | 3.4:+95420004 | MS.gene031245:CDS |
| GTCTTGAAGTGCAACCAGGG+TGG | 0.726402 | 3.4:-95422740 | None:intergenic |
| TTGCAGGTTCAAGACCCACG+AGG | 0.774422 | 3.4:-95419379 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGTATATTTATAATTTATT+TGG | + | chr3.4:95417896-95417915 | MS.gene031245:intron | 10.0% |
| !! | CTAAAACATTATATTATATA+AGG | - | chr3.4:95422624-95422643 | None:intergenic | 10.0% |
| !! | TTAATAAATTAATAATGAAG+AGG | - | chr3.4:95419422-95419441 | None:intergenic | 10.0% |
| !!! | TATTTTATAGAATAAGTAAA+AGG | - | chr3.4:95420110-95420129 | None:intergenic | 10.0% |
| !!! | TTTTAACAATATCAATATTT+AGG | + | chr3.4:95419916-95419935 | MS.gene031245:intron | 10.0% |
| !! | AAAAATAGTGAATGTTATTA+AGG | - | chr3.4:95418938-95418957 | None:intergenic | 15.0% |
| !! | AATATAATATATAGTACTCA+AGG | - | chr3.4:95420833-95420852 | None:intergenic | 15.0% |
| !! | AATTTATTTGGCAAATTAAA+AGG | + | chr3.4:95417908-95417927 | MS.gene031245:intron | 15.0% |
| !! | ATATAATATATAGTACTCAA+GGG | - | chr3.4:95420832-95420851 | None:intergenic | 15.0% |
| !! | ATTTATTTGGCAAATTAAAA+GGG | + | chr3.4:95417909-95417928 | MS.gene031245:intron | 15.0% |
| !! | TAATGGAATACTATTATTTA+TGG | + | chr3.4:95418650-95418669 | MS.gene031245:intron | 15.0% |
| !!! | TAACGATATATGAAATATTT+TGG | + | chr3.4:95422993-95423012 | MS.gene031245:intron | 15.0% |
| !!! | TAGCTAAAATCATTATTTTA+AGG | + | chr3.4:95418316-95418335 | MS.gene031245:intron | 15.0% |
| !!! | TATTTTTTCTGATAAGAATT+TGG | + | chr3.4:95422537-95422556 | MS.gene031245:intron | 15.0% |
| !!! | TTAAAATAATGATTTTAGCT+AGG | - | chr3.4:95418317-95418336 | None:intergenic | 15.0% |
| !! | AAATAAAAGGTAAAGAAAGT+AGG | - | chr3.4:95418805-95418824 | None:intergenic | 20.0% |
| !! | AAATACATGTAGTAAATGTT+TGG | - | chr3.4:95421020-95421039 | None:intergenic | 20.0% |
| !! | AACATTTACATCACATAATT+AGG | - | chr3.4:95419251-95419270 | None:intergenic | 20.0% |
| !! | AACTGAAAGTTAAGTAAATA+TGG | - | chr3.4:95420135-95420154 | None:intergenic | 20.0% |
| !! | AAGAAAAATTACATCACATA+AGG | - | chr3.4:95419145-95419164 | None:intergenic | 20.0% |
| !! | AATAAAAGGTAAAGAAAGTA+GGG | - | chr3.4:95418804-95418823 | None:intergenic | 20.0% |
| !! | AATTAAGAAGGTGAAATAAA+AGG | - | chr3.4:95418818-95418837 | None:intergenic | 20.0% |
| !! | AGTAAAATAGCAAAATACAA+GGG | - | chr3.4:95418545-95418564 | None:intergenic | 20.0% |
| !! | AGTATAGTACTATAGTTATA+TGG | - | chr3.4:95418582-95418601 | None:intergenic | 20.0% |
| !! | ATAAAGGGAATAAATTAAGA+AGG | - | chr3.4:95418830-95418849 | None:intergenic | 20.0% |
| !! | ATAAAGGTAAAAAATCAATC+AGG | - | chr3.4:95419114-95419133 | None:intergenic | 20.0% |
| !! | ATATAACTATAGTACTATAC+TGG | + | chr3.4:95418581-95418600 | MS.gene031245:intron | 20.0% |
| !! | ATCTCATTAGTGTTAATTAA+AGG | + | chr3.4:95418978-95418997 | MS.gene031245:intron | 20.0% |
| !! | ATGATCAACAATATGAATTA+TGG | - | chr3.4:95420062-95420081 | None:intergenic | 20.0% |
| !! | TAAATTAATAATGAAGAGGA+AGG | - | chr3.4:95419418-95419437 | None:intergenic | 20.0% |
| !! | TACTATGTAATGCAAATAAA+GGG | - | chr3.4:95418845-95418864 | None:intergenic | 20.0% |
| !! | TAGTAAAATAGCAAAATACA+AGG | - | chr3.4:95418546-95418565 | None:intergenic | 20.0% |
| !! | TTTACCTTCAAATCTATATA+TGG | - | chr3.4:95420283-95420302 | None:intergenic | 20.0% |
| !!! | AAAAGAAAATATAAGAGTGT+TGG | - | chr3.4:95419228-95419247 | None:intergenic | 20.0% |
| !!! | AATTTAAATATGATTTTGGC+AGG | + | chr3.4:95422666-95422685 | MS.gene031245:intron | 20.0% |
| !!! | ATTGAAAGATTCTTTCATTT+TGG | + | chr3.4:95419038-95419057 | MS.gene031245:intron | 20.0% |
| !!! | TAATTACATTTTGTGTATGT+TGG | - | chr3.4:95418149-95418168 | None:intergenic | 20.0% |
| !!! | TACTTCCTTTTTATTTTACA+GGG | + | chr3.4:95420528-95420547 | MS.gene031245:intron | 20.0% |
| !!! | TTACTTCCTTTTTATTTTAC+AGG | + | chr3.4:95420527-95420546 | MS.gene031245:intron | 20.0% |
| !!! | TTGAAAGATTCTTTCATTTT+GGG | + | chr3.4:95419039-95419058 | MS.gene031245:intron | 20.0% |
| ! | AAAAATCTAAGAAGAATAGC+CGG | - | chr3.4:95421092-95421111 | None:intergenic | 25.0% |
| ! | AATAGATATGTTCAAGAGAA+TGG | - | chr3.4:95421509-95421528 | None:intergenic | 25.0% |
| ! | AATTACATCACATAAGGAAA+AGG | - | chr3.4:95419139-95419158 | None:intergenic | 25.0% |
| ! | ACATAAGGAAAAGGATATAA+AGG | - | chr3.4:95419130-95419149 | None:intergenic | 25.0% |
| ! | ATGATGATCTTAATCATGTT+CGG | + | chr3.4:95422374-95422393 | MS.gene031245:intron | 25.0% |
| ! | ATGTAAGAGATAACAAAATC+AGG | - | chr3.4:95421283-95421302 | None:intergenic | 25.0% |
| ! | ATTGCCATATATAGATTTGA+AGG | + | chr3.4:95420276-95420295 | MS.gene031245:intron | 25.0% |
| ! | CTAAAATACTTACTTGTAAG+AGG | - | chr3.4:95421482-95421501 | None:intergenic | 25.0% |
| ! | CTAAATCTTGGTTATAACAA+TGG | + | chr3.4:95420664-95420683 | MS.gene031245:CDS | 25.0% |
| ! | GTACTATGTAATGCAAATAA+AGG | - | chr3.4:95418846-95418865 | None:intergenic | 25.0% |
| ! | GTGATCATAAAAGAAATGTT+AGG | + | chr3.4:95418260-95418279 | MS.gene031245:intron | 25.0% |
| ! | TATAAATATACCTTCTGTTC+TGG | - | chr3.4:95417889-95417908 | None:intergenic | 25.0% |
| ! | TCTTAGTCACAATAATAACT+TGG | + | chr3.4:95419653-95419672 | MS.gene031245:intron | 25.0% |
| ! | TTCAAATCTATATATGGCAA+TGG | - | chr3.4:95420277-95420296 | None:intergenic | 25.0% |
| ! | TTCACTCAATGCATATTAAT+GGG | - | chr3.4:95419455-95419474 | None:intergenic | 25.0% |
| ! | TTGGAATAGTACTAAGTTAT+TGG | + | chr3.4:95420870-95420889 | MS.gene031245:intron | 25.0% |
| !! | AAAGAGTATGTTGATGTTAA+CGG | + | chr3.4:95422862-95422881 | MS.gene031245:intron | 25.0% |
| !! | AGTAAAAAAAGAAGTTGGTT+TGG | - | chr3.4:95418902-95418921 | None:intergenic | 25.0% |
| !! | CTATTCTTCTTAGATTTTTG+CGG | + | chr3.4:95421093-95421112 | MS.gene031245:CDS | 25.0% |
| !! | GAAAAGATATTTGATGACAA+TGG | + | chr3.4:95422772-95422791 | MS.gene031245:CDS | 25.0% |
| !! | GAATGTTATTAAGGTTTGTT+TGG | - | chr3.4:95418929-95418948 | None:intergenic | 25.0% |
| !! | GTCATCAAATATCTTTTCTA+GGG | - | chr3.4:95422770-95422789 | None:intergenic | 25.0% |
| !! | TATTCTTCTTAGATTTTTGC+GGG | + | chr3.4:95421094-95421113 | MS.gene031245:CDS | 25.0% |
| !! | TGATTTTACTGATGTCAAAA+TGG | - | chr3.4:95420965-95420984 | None:intergenic | 25.0% |
| !! | TGTCATCAAATATCTTTTCT+AGG | - | chr3.4:95422771-95422790 | None:intergenic | 25.0% |
| !! | TTAAGTTTTACTAGTGTGTT+TGG | + | chr3.4:95420851-95420870 | MS.gene031245:intron | 25.0% |
| !! | TTTTCTGATAAGAATTTGGT+TGG | + | chr3.4:95422541-95422560 | MS.gene031245:intron | 25.0% |
| !!! | AATTTTTTCGTCAACTAAGT+CGG | + | chr3.4:95419065-95419084 | MS.gene031245:intron | 25.0% |
| !!! | ACTTCCTTTTTATTTTACAG+GGG | + | chr3.4:95420529-95420548 | MS.gene031245:intron | 25.0% |
| !!! | ATATGAAATATTTTGGTGCA+GGG | + | chr3.4:95423000-95423019 | MS.gene031245:intron | 25.0% |
| !!! | GTGTTGTTTATTAATTTTGC+AGG | + | chr3.4:95417980-95417999 | MS.gene031245:intron | 25.0% |
| !!! | TATATGAAATATTTTGGTGC+AGG | + | chr3.4:95422999-95423018 | MS.gene031245:intron | 25.0% |
| !!! | TATTTTTAACTGCATTGGTA+TGG | + | chr3.4:95418951-95418970 | MS.gene031245:intron | 25.0% |
| !!! | TTCACTATTTTTAACTGCAT+TGG | + | chr3.4:95418946-95418965 | MS.gene031245:intron | 25.0% |
| AAATTTGTGATGTCCTTTAC+AGG | + | chr3.4:95419479-95419498 | MS.gene031245:intron | 30.0% | |
| AACCAAACTTTGATCTGTTT+AGG | - | chr3.4:95417866-95417885 | None:intergenic | 30.0% | |
| AACCTAAACAGATCAAAGTT+TGG | + | chr3.4:95417861-95417880 | MS.gene031245:CDS | 30.0% | |
| AATCGATACTTAAATCCCTT+TGG | + | chr3.4:95422462-95422481 | MS.gene031245:CDS | 30.0% | |
| AATGCAATTGTGAAGGAAAA+TGG | - | chr3.4:95420471-95420490 | None:intergenic | 30.0% | |
| AGATTTGAAGGTAAACATGT+TGG | + | chr3.4:95420288-95420307 | MS.gene031245:intron | 30.0% | |
| AGCTACAAAATAATAGCTTG+TGG | - | chr3.4:95420939-95420958 | None:intergenic | 30.0% | |
| ATATATAGTACTCAAGGGAA+AGG | - | chr3.4:95420827-95420846 | None:intergenic | 30.0% | |
| CAGAACTACTTAAATGTGAA+GGG | + | chr3.4:95422435-95422454 | MS.gene031245:CDS | 30.0% | |
| CATGTTAGATTTCGTTAATG+TGG | - | chr3.4:95419701-95419720 | None:intergenic | 30.0% | |
| CTCTCAATTGCAATTATAGA+AGG | - | chr3.4:95421579-95421598 | None:intergenic | 30.0% | |
| CTGATTATAGAAGATGCTTT+CGG | + | chr3.4:95421677-95421696 | MS.gene031245:intron | 30.0% | |
| GAATCCCCTGTAAAATAAAA+AGG | - | chr3.4:95420536-95420555 | None:intergenic | 30.0% | |
| GAATTATACCTGTAACAACA+TGG | - | chr3.4:95420734-95420753 | None:intergenic | 30.0% | |
| GACTTAGTTGACGAAAAAAT+TGG | - | chr3.4:95419066-95419085 | None:intergenic | 30.0% | |
| GCTATAGAAAGAAGAATATG+AGG | - | chr3.4:95418173-95418192 | None:intergenic | 30.0% | |
| GTTCACTCAATGCATATTAA+TGG | - | chr3.4:95419456-95419475 | None:intergenic | 30.0% | |
| TACATGTTTATGCACCTATA+TGG | + | chr3.4:95419838-95419857 | MS.gene031245:intron | 30.0% | |
| TACTAAGTTATTGGTGTGTT+TGG | + | chr3.4:95420879-95420898 | MS.gene031245:intron | 30.0% | |
| TAGTAACAATGCAATTGTGA+AGG | - | chr3.4:95420478-95420497 | None:intergenic | 30.0% | |
| TCTGTTTCATGTTCATCAAT+TGG | + | chr3.4:95423133-95423152 | MS.gene031245:CDS | 30.0% | |
| TGATGATCTTAATCATGTTC+GGG | + | chr3.4:95422375-95422394 | MS.gene031245:intron | 30.0% | |
| TGCGATATTATCTTGAAGAT+GGG | - | chr3.4:95422136-95422155 | None:intergenic | 30.0% | |
| TGTTAAACATGCAACCATAT+AGG | - | chr3.4:95419855-95419874 | None:intergenic | 30.0% | |
| TTCTTAGTACTCACTACTTA+TGG | + | chr3.4:95420761-95420780 | MS.gene031245:intron | 30.0% | |
| TTGACATCAGTAAAATCACT+TGG | + | chr3.4:95420967-95420986 | MS.gene031245:intron | 30.0% | |
| TTGAGAGAAAACACTTCTAT+TGG | + | chr3.4:95421592-95421611 | MS.gene031245:intron | 30.0% | |
| TTTAGCAGAGTTTCTATCAA+AGG | + | chr3.4:95418726-95418745 | MS.gene031245:CDS | 30.0% | |
| TTTAGGCTTTACGTCATTTA+AGG | + | chr3.4:95420349-95420368 | MS.gene031245:intron | 30.0% | |
| ! | AAGAGTATGTTGATGTTAAC+GGG | + | chr3.4:95422863-95422882 | MS.gene031245:intron | 30.0% |
| ! | ACAAAATAATAGCTTGTGGT+TGG | - | chr3.4:95420935-95420954 | None:intergenic | 30.0% |
| ! | GTTTTCTGTAATACAGTTCA+TGG | + | chr3.4:95421392-95421411 | MS.gene031245:intron | 30.0% |
| ! | TCAAACATGTTTTTCGTCTT+TGG | + | chr3.4:95421347-95421366 | MS.gene031245:intron | 30.0% |
| ! | TGTTGATCATATGCTTTTAG+AGG | + | chr3.4:95420072-95420091 | MS.gene031245:CDS | 30.0% |
| ! | TTACATTTTGTGTATGTTGG+CGG | - | chr3.4:95418146-95418165 | None:intergenic | 30.0% |
| ! | TTGATTCGCAAACGTAAAAA+CGG | - | chr3.4:95422698-95422717 | None:intergenic | 30.0% |
| !! | AATATCAGAGTTTGAGTTGA+AGG | - | chr3.4:95419887-95419906 | None:intergenic | 30.0% |
| !! | TAAATTTTGCCATTTGAGTC+TGG | + | chr3.4:95418283-95418302 | MS.gene031245:intron | 30.0% |
| !!! | TTTTTTCGCAGATTCTATCT+AGG | + | chr3.4:95422410-95422429 | MS.gene031245:intron | 30.0% |
| AAAACGTGTTCTCATACACA+AGG | - | chr3.4:95418122-95418141 | None:intergenic | 35.0% | |
| AAAATGTATGCGACGAAGTT+TGG | + | chr3.4:95422919-95422938 | MS.gene031245:intron | 35.0% | |
| AATAGTTAGCTATGCACATG+AGG | - | chr3.4:95421704-95421723 | None:intergenic | 35.0% | |
| AATGAACAAACTGCTTATGG+AGG | + | chr3.4:95418065-95418084 | MS.gene031245:CDS | 35.0% | |
| AATGTTATGTCCACAGGAAA+TGG | + | chr3.4:95419564-95419583 | MS.gene031245:CDS | 35.0% | |
| ACAGCTCTCTCATAAGTTAT+TGG | - | chr3.4:95423072-95423091 | None:intergenic | 35.0% | |
| ACCAAATGACTTCTGATACT+CGG | + | chr3.4:95420909-95420928 | MS.gene031245:intron | 35.0% | |
| ACTGTATTACAGAAAACCAC+TGG | - | chr3.4:95421389-95421408 | None:intergenic | 35.0% | |
| AGAAATTGCAACGATTCCAA+TGG | - | chr3.4:95419324-95419343 | None:intergenic | 35.0% | |
| AGCAATGAACAAACTGCTTA+TGG | + | chr3.4:95418062-95418081 | MS.gene031245:CDS | 35.0% | |
| AGGTGATGAATTCACAAGAA+GGG | - | chr3.4:95420629-95420648 | None:intergenic | 35.0% | |
| CATTGAATTGCTTTACATGC+AGG | + | chr3.4:95419593-95419612 | MS.gene031245:CDS | 35.0% | |
| CTGCATGTAAAGCAATTCAA+TGG | - | chr3.4:95419595-95419614 | None:intergenic | 35.0% | |
| CTGCGATATTATCTTGAAGA+TGG | - | chr3.4:95422137-95422156 | None:intergenic | 35.0% | |
| GAAATTCTTCCACTTCTTGT+TGG | + | chr3.4:95421926-95421945 | MS.gene031245:intron | 35.0% | |
| GCAGAACTACTTAAATGTGA+AGG | + | chr3.4:95422434-95422453 | MS.gene031245:CDS | 35.0% | |
| GCAGCAGTAAAAAAAGAAGT+TGG | - | chr3.4:95418907-95418926 | None:intergenic | 35.0% | |
| GGTATTTGTTTATCCAGCAT+GGG | + | chr3.4:95423042-95423061 | MS.gene031245:CDS | 35.0% | |
| GGTTCAATATGAGAGAGAAT+AGG | - | chr3.4:95417845-95417864 | None:intergenic | 35.0% | |
| GTATTTGTTTATCCAGCATG+GGG | + | chr3.4:95423043-95423062 | MS.gene031245:CDS | 35.0% | |
| GTTATCAAGCTTGAGAACAT+GGG | + | chr3.4:95421417-95421436 | MS.gene031245:CDS | 35.0% | |
| TACTATCCAACGACATACAT+TGG | - | chr3.4:95418632-95418651 | None:intergenic | 35.0% | |
| TAGGTGATGAATTCACAAGA+AGG | - | chr3.4:95420630-95420649 | None:intergenic | 35.0% | |
| TCAAGATAATATCGCAGCTA+TGG | + | chr3.4:95422140-95422159 | MS.gene031245:CDS | 35.0% | |
| TCACTTAACAACACACAGAA+TGG | + | chr3.4:95419950-95419969 | MS.gene031245:CDS | 35.0% | |
| TCAGAGAAAGATGCATCAAT+TGG | - | chr3.4:95421806-95421825 | None:intergenic | 35.0% | |
| TGATTCGCAAACGTAAAAAC+GGG | - | chr3.4:95422697-95422716 | None:intergenic | 35.0% | |
| TGCTGTTATGCATAGTGAAA+TGG | - | chr3.4:95422338-95422357 | None:intergenic | 35.0% | |
| TGGTATTTGTTTATCCAGCA+TGG | + | chr3.4:95423041-95423060 | MS.gene031245:CDS | 35.0% | |
| TGGTCTATGTTAGATAGTGA+TGG | + | chr3.4:95420589-95420608 | MS.gene031245:CDS | 35.0% | |
| TGTAAGAGGAAAATATCACC+AGG | - | chr3.4:95421468-95421487 | None:intergenic | 35.0% | |
| TGTATGTCGTTGGATAGTAA+TGG | + | chr3.4:95418633-95418652 | MS.gene031245:intron | 35.0% | |
| TTCTGTAATACAGTTCATGG+AGG | + | chr3.4:95421395-95421414 | MS.gene031245:intron | 35.0% | |
| TTGCTGAAATCCTCAAAGAT+AGG | + | chr3.4:95419502-95419521 | MS.gene031245:CDS | 35.0% | |
| ! | ACTTCAGCTCTAACAAAATG+CGG | - | chr3.4:95419995-95420014 | None:intergenic | 35.0% |
| ! | AGTCACAACGTTTGATTTAG+CGG | - | chr3.4:95422596-95422615 | None:intergenic | 35.0% |
| ! | ATCCTTGTACTCAAGACTTT+TGG | + | chr3.4:95419186-95419205 | MS.gene031245:intron | 35.0% |
| ! | ATGTTGATGTTAACGGGTAT+TGG | + | chr3.4:95422869-95422888 | MS.gene031245:intron | 35.0% |
| ! | CATTTAGAACATCCACAGTT+CGG | - | chr3.4:95419548-95419567 | None:intergenic | 35.0% |
| ! | GTTCTAAATGTTATGTCCAC+AGG | + | chr3.4:95419558-95419577 | MS.gene031245:CDS | 35.0% |
| ! | TGTTGATGTTAACGGGTATT+GGG | + | chr3.4:95422870-95422889 | MS.gene031245:intron | 35.0% |
| !! | AAGATGATGGGACTAAATCT+TGG | + | chr3.4:95420652-95420671 | MS.gene031245:CDS | 35.0% |
| !! | GAGTTTGAGTTGAAGGATAT+AGG | - | chr3.4:95419880-95419899 | None:intergenic | 35.0% |
| !! | TGATTCTTTGAAATCAGCCT+TGG | + | chr3.4:95420165-95420184 | MS.gene031245:intron | 35.0% |
| !!! | AAGTTGGTTTTGGACATTCA+TGG | - | chr3.4:95417790-95417809 | None:intergenic | 35.0% |
| AAAGCCTAAACGACAATTGC+AGG | - | chr3.4:95420339-95420358 | None:intergenic | 40.0% | |
| AAGCCTAAACGACAATTGCA+GGG | - | chr3.4:95420338-95420357 | None:intergenic | 40.0% | |
| AATCTAAGAAGAATAGCCGG+AGG | - | chr3.4:95421089-95421108 | None:intergenic | 40.0% | |
| ACGAAAACCAGAAGGCAAAA+TGG | - | chr3.4:95421837-95421856 | None:intergenic | 40.0% | |
| ACTATACCTGCTGCATTATC+TGG | - | chr3.4:95422825-95422844 | None:intergenic | 40.0% | |
| ACTGATCCAATGTATGTCGT+TGG | + | chr3.4:95418623-95418642 | MS.gene031245:intron | 40.0% | |
| AGATGGTAGCAAGATAGCAA+TGG | + | chr3.4:95417706-95417725 | MS.gene031245:CDS | 40.0% | |
| AGCAAGATAGCAATGGACAA+TGG | + | chr3.4:95417713-95417732 | MS.gene031245:CDS | 40.0% | |
| AGCATGGATGACTCATAAAG+TGG | - | chr3.4:95420212-95420231 | None:intergenic | 40.0% | |
| AGGAAGTTAATTACCCTTGC+AGG | - | chr3.4:95419398-95419417 | None:intergenic | 40.0% | |
| AGGATTTCAGCAACCTGTAA+AGG | - | chr3.4:95419495-95419514 | None:intergenic | 40.0% | |
| AGGGATGATATTACAATGCC+TGG | + | chr3.4:95421447-95421466 | MS.gene031245:CDS | 40.0% | |
| AGGGTAATTAACCTTCATCC+CGG | - | chr3.4:95418785-95418804 | None:intergenic | 40.0% | |
| ATCATCACTCCAACAAGAAG+TGG | - | chr3.4:95421938-95421957 | None:intergenic | 40.0% | |
| ATCTAAGAAGAATAGCCGGA+GGG | - | chr3.4:95421088-95421107 | None:intergenic | 40.0% | |
| CAAAGCTTCCATGTTGTTAC+AGG | + | chr3.4:95420723-95420742 | MS.gene031245:CDS | 40.0% | |
| CAGGGTTTCATGTGTATTCA+AGG | + | chr3.4:95423018-95423037 | MS.gene031245:intron | 40.0% | |
| CATACCTCTTGAATCTAGCA+CGG | + | chr3.4:95421859-95421878 | MS.gene031245:CDS | 40.0% | |
| CGAAAACCAGAAGGCAAAAT+GGG | - | chr3.4:95421836-95421855 | None:intergenic | 40.0% | |
| CTATACCTGCTGCATTATCT+GGG | - | chr3.4:95422824-95422843 | None:intergenic | 40.0% | |
| CTGTAACAACATGGAAGCTT+TGG | - | chr3.4:95420725-95420744 | None:intergenic | 40.0% | |
| CTTGTAGACTAACAAACCAG+TGG | + | chr3.4:95421370-95421389 | MS.gene031245:intron | 40.0% | |
| GAGCTGAGATCATCAAAGTT+AGG | + | chr3.4:95418228-95418247 | MS.gene031245:intron | 40.0% | |
| GAGTATCAGAAGTCATTTGG+TGG | - | chr3.4:95420910-95420929 | None:intergenic | 40.0% | |
| GAGTTTCTATCAAAGGCTAC+TGG | + | chr3.4:95418733-95418752 | MS.gene031245:CDS | 40.0% | |
| GCATGGATGACTCATAAAGT+GGG | - | chr3.4:95420211-95420230 | None:intergenic | 40.0% | |
| GGAATCGTTGCAATTTCTCA+TGG | + | chr3.4:95419326-95419345 | MS.gene031245:CDS | 40.0% | |
| GGTATGATACGAAAACCAGA+AGG | - | chr3.4:95421845-95421864 | None:intergenic | 40.0% | |
| GGTTATCAAGCTTGAGAACA+TGG | + | chr3.4:95421416-95421435 | MS.gene031245:CDS | 40.0% | |
| GGTTTCATGTGTATTCAAGG+TGG | + | chr3.4:95423021-95423040 | MS.gene031245:CDS | 40.0% | |
| TATACCTGCTGCATTATCTG+GGG | - | chr3.4:95422823-95422842 | None:intergenic | 40.0% | |
| TATCTGATTAGACCCTGTGA+AGG | + | chr3.4:95420028-95420047 | MS.gene031245:CDS | 40.0% | |
| TCATCACCTAGCAAGATGAT+GGG | + | chr3.4:95420640-95420659 | MS.gene031245:CDS | 40.0% | |
| TGATCTTAATCATGTTCGGG+CGG | + | chr3.4:95422378-95422397 | MS.gene031245:intron | 40.0% | |
| TTCATCACCTAGCAAGATGA+TGG | + | chr3.4:95420639-95420658 | MS.gene031245:CDS | 40.0% | |
| TTTACGTTTGCGAATCAAGC+TGG | + | chr3.4:95422700-95422719 | MS.gene031245:CDS | 40.0% | |
| TTTAGTCCCATCATCTTGCT+AGG | - | chr3.4:95420649-95420668 | None:intergenic | 40.0% | |
| ! | AAGTTTGGTTCCAGAACAGA+AGG | + | chr3.4:95417876-95417895 | MS.gene031245:CDS | 40.0% |
| ! | AATGCTTTTCACTTACCACC+TGG | + | chr3.4:95422243-95422262 | MS.gene031245:CDS | 40.0% |
| ! | ACTTTGATGATCTCAGCTCA+AGG | - | chr3.4:95418227-95418246 | None:intergenic | 40.0% |
| ! | ATTTGATGACTTACCCAGCA+GGG | - | chr3.4:95418517-95418536 | None:intergenic | 40.0% |
| ! | GGTTCTGTGTTGCTCTTTAA+AGG | + | chr3.4:95422499-95422518 | MS.gene031245:CDS | 40.0% |
| ! | GTGATGAATGTTTTGTAGCC+TGG | + | chr3.4:95419290-95419309 | MS.gene031245:intron | 40.0% |
| ! | TAACCCTGCAATTGTCGTTT+AGG | + | chr3.4:95420332-95420351 | MS.gene031245:intron | 40.0% |
| ! | TATCAGAAGTCATTTGGTGG+TGG | - | chr3.4:95420907-95420926 | None:intergenic | 40.0% |
| ! | TATTTGATGACTTACCCAGC+AGG | - | chr3.4:95418518-95418537 | None:intergenic | 40.0% |
| ! | TGAGAACATGGGCTACTATA+GGG | + | chr3.4:95421428-95421447 | MS.gene031245:CDS | 40.0% |
| ! | TGGACAATGGAAAGTACGTA+AGG | + | chr3.4:95417726-95417745 | MS.gene031245:CDS | 40.0% |
| ! | TTGAGAACATGGGCTACTAT+AGG | + | chr3.4:95421427-95421446 | MS.gene031245:CDS | 40.0% |
| !! | GTGTTGGTTTATGTAGTCCT+TGG | - | chr3.4:95419212-95419231 | None:intergenic | 40.0% |
| !! | TACACATCACTTTTGGAGGA+TGG | + | chr3.4:95419789-95419808 | MS.gene031245:CDS | 40.0% |
| !! | TGTTAACGGGTATTGGGAAA+TGG | + | chr3.4:95422876-95422895 | MS.gene031245:intron | 40.0% |
| AAAACTTCAGGCACACTCCA+AGG | - | chr3.4:95420185-95420204 | None:intergenic | 45.0% | |
| AACCACTGGAAACAAAGCAG+GGG | + | chr3.4:95422041-95422060 | MS.gene031245:CDS | 45.0% | |
| AATGGTTCCTCCATTTCCTG+TGG | - | chr3.4:95419577-95419596 | None:intergenic | 45.0% | |
| ACCATGAGAGCCTATCTTTG+AGG | - | chr3.4:95419515-95419534 | None:intergenic | 45.0% | |
| ATACCTGCTGCATTATCTGG+GGG | - | chr3.4:95422822-95422841 | None:intergenic | 45.0% | |
| CAAAACCAACTTCTCTTCGC+AGG | + | chr3.4:95417798-95417817 | MS.gene031245:CDS | 45.0% | |
| CTGAAGCACAAACGCTTACT+CGG | + | chr3.4:95422271-95422290 | MS.gene031245:CDS | 45.0% | |
| CTTATGAGAGAGCTGTAGCA+TGG | + | chr3.4:95423076-95423095 | MS.gene031245:CDS | 45.0% | |
| GAACCACTGGAAACAAAGCA+GGG | + | chr3.4:95422040-95422059 | MS.gene031245:CDS | 45.0% | |
| GAAGGTTACAAGCTGTGAAC+AGG | + | chr3.4:95418031-95418050 | MS.gene031245:CDS | 45.0% | |
| GATGTCTTGAAGTGCAACCA+GGG | - | chr3.4:95422746-95422765 | None:intergenic | 45.0% | |
| GATTCAACGAAGCTGTCAAC+GGG | + | chr3.4:95420551-95420570 | MS.gene031245:CDS | 45.0% | |
| GATTTAGCGGTGAGGAGTTT+CGG | - | chr3.4:95422583-95422602 | None:intergenic | 45.0% | |
| GCAACGATTCCAATGGAATC+CGG | - | chr3.4:95419317-95419336 | None:intergenic | 45.0% | |
| GCAACTTGACCAGACTCAAA+TGG | - | chr3.4:95418295-95418314 | None:intergenic | 45.0% | |
| GCCGAGTATCAGAAGTCATT+TGG | - | chr3.4:95420913-95420932 | None:intergenic | 45.0% | |
| GCTTGCTCAGAGAACAACTA+TGG | + | chr3.4:95420232-95420251 | MS.gene031245:CDS | 45.0% | |
| GGATTCAACGAAGCTGTCAA+CGG | + | chr3.4:95420550-95420569 | MS.gene031245:CDS | 45.0% | |
| GGCCAAAAGTCTTGAGTACA+AGG | - | chr3.4:95419191-95419210 | None:intergenic | 45.0% | |
| GGGTAATTAACCTTCATCCC+GGG | - | chr3.4:95418784-95418803 | None:intergenic | 45.0% | |
| GGGTGACAATTCAGGTCATT+CGG | + | chr3.4:95422062-95422081 | MS.gene031245:CDS | 45.0% | |
| GGTCTAATCAGATAACCGCT+AGG | - | chr3.4:95420022-95420041 | None:intergenic | 45.0% | |
| GGTGACAATTCAGGTCATTC+GGG | + | chr3.4:95422063-95422082 | MS.gene031245:CDS | 45.0% | |
| GGTGGATCTGTAACAGCTAT+AGG | + | chr3.4:95422292-95422311 | MS.gene031245:CDS | 45.0% | |
| GTGAGTTCAGGATGCAAAGA+TGG | + | chr3.4:95417689-95417708 | MS.gene031245:CDS | 45.0% | |
| GTTATGTCCACAGGAAATGG+AGG | + | chr3.4:95419567-95419586 | MS.gene031245:CDS | 45.0% | |
| TAAAGTGGGCGCAAAACTTC+AGG | - | chr3.4:95420197-95420216 | None:intergenic | 45.0% | |
| TCACACAATTGAGCACGAAG+AGG | + | chr3.4:95421244-95421263 | MS.gene031245:CDS | 45.0% | |
| TCCTCAAAGATAGGCTCTCA+TGG | + | chr3.4:95419511-95419530 | MS.gene031245:CDS | 45.0% | |
| TCTGAGAACCAAAACGCGAA+GGG | - | chr3.4:95422224-95422243 | None:intergenic | 45.0% | |
| TGATGTCTTGAAGTGCAACC+AGG | - | chr3.4:95422747-95422766 | None:intergenic | 45.0% | |
| TGATTAGACCCTGTGAAGGA+GGG | + | chr3.4:95420032-95420051 | MS.gene031245:CDS | 45.0% | |
| TGCTAAAGTCTCCTCTGCAA+TGG | - | chr3.4:95418713-95418732 | None:intergenic | 45.0% | |
| TGCTCAATTGTGTGAGCTAG+TGG | - | chr3.4:95421239-95421258 | None:intergenic | 45.0% | |
| TGTGAGTCAGTGGTAACAAG+CGG | + | chr3.4:95418464-95418483 | MS.gene031245:CDS | 45.0% | |
| TTTGGCACATAGCACAGAAC+TGG | - | chr3.4:95420707-95420726 | None:intergenic | 45.0% | |
| TTTGTTTATCCAGCATGGGG+AGG | + | chr3.4:95423046-95423065 | MS.gene031245:CDS | 45.0% | |
| ! | CAACGTTTGATTTAGCGGTG+AGG | - | chr3.4:95422591-95422610 | None:intergenic | 45.0% |
| ! | CAGACTTTTGTCCATTGCAG+AGG | + | chr3.4:95418699-95418718 | MS.gene031245:intron | 45.0% |
| ! | CATCTTCCTCAGCTTTGTAG+TGG | + | chr3.4:95421734-95421753 | MS.gene031245:intron | 45.0% |
| ! | GAATGTTTTGTAGCCTGGTC+CGG | + | chr3.4:95419295-95419314 | MS.gene031245:intron | 45.0% |
| ! | GATGGGCTTCAAATGCAAAC+TGG | - | chr3.4:95422119-95422138 | None:intergenic | 45.0% |
| ! | GCTACATGGACCAGCTTTAA+TGG | - | chr3.4:95421171-95421190 | None:intergenic | 45.0% |
| ! | GTACTCAAGACTTTTGGCCA+AGG | + | chr3.4:95419192-95419211 | MS.gene031245:intron | 45.0% |
| ! | GTCAACGGGTTTACAGATGA+TGG | + | chr3.4:95420565-95420584 | MS.gene031245:CDS | 45.0% |
| ! | TTCTGAGAACCAAAACGCGA+AGG | - | chr3.4:95422225-95422244 | None:intergenic | 45.0% |
| !! | ACGGGTTTACAGATGATGGA+TGG | + | chr3.4:95420569-95420588 | MS.gene031245:CDS | 45.0% |
| !! | CTGCGAAGAGAAGTTGGTTT+TGG | - | chr3.4:95417800-95417819 | None:intergenic | 45.0% |
| !!! | TTTAAATTTAAATATGATTT+TGG | + | chr3.4:95422662-95422681 | MS.gene031245:intron | 5.0% |
| AAAGCAGGGGGTGACAATTC+AGG | + | chr3.4:95422054-95422073 | MS.gene031245:CDS | 50.0% | |
| AAGCACAAACGCTTACTCGG+TGG | + | chr3.4:95422274-95422293 | MS.gene031245:CDS | 50.0% | |
| AAGGTACACACCAGAGCAAG+TGG | + | chr3.4:95417745-95417764 | MS.gene031245:CDS | 50.0% | |
| ACCACTGGAAACAAAGCAGG+GGG | + | chr3.4:95422042-95422061 | MS.gene031245:CDS | 50.0% | |
| AGCAGAGGAAAGAAGCTGGA+AGG | + | chr3.4:95418013-95418032 | MS.gene031245:CDS | 50.0% | |
| ATTAGACCCTGTGAAGGAGG+GGG | + | chr3.4:95420034-95420053 | MS.gene031245:CDS | 50.0% | |
| ATTCCAATGGAATCCGGACC+AGG | - | chr3.4:95419311-95419330 | None:intergenic | 50.0% | |
| ATTCCCCCAGATAATGCAGC+AGG | + | chr3.4:95422816-95422835 | MS.gene031245:CDS | 50.0% | |
| CAGAAGCAAGATCGAGTGTG+CGG | - | chr3.4:95422008-95422027 | None:intergenic | 50.0% | |
| CATTTGGACCCACTCAACAG+CGG | - | chr3.4:95418761-95418780 | None:intergenic | 50.0% | |
| CCTTTGGCATCACTCAGATG+CGG | + | chr3.4:95422478-95422497 | MS.gene031245:CDS | 50.0% | |
| CGAGTAAGCGTTTGTGCTTC+AGG | - | chr3.4:95422273-95422292 | None:intergenic | 50.0% | |
| CGATCTTGCTTCTGCACTTG+AGG | + | chr3.4:95422014-95422033 | MS.gene031245:CDS | 50.0% | |
| CGCATCTGAGTGATGCCAAA+GGG | - | chr3.4:95422480-95422499 | None:intergenic | 50.0% | |
| CTGAGAACCAAAACGCGAAG+GGG | - | chr3.4:95422223-95422242 | None:intergenic | 50.0% | |
| CTGATTAGACCCTGTGAAGG+AGG | + | chr3.4:95420031-95420050 | MS.gene031245:CDS | 50.0% | |
| CTTGCCGTGCTAGATTCAAG+AGG | - | chr3.4:95421866-95421885 | None:intergenic | 50.0% | |
| CTTGCTTCTGCACTTGAGGT+TGG | + | chr3.4:95422018-95422037 | MS.gene031245:CDS | 50.0% | |
| GAGAAGCAGAGGAAAGAAGC+TGG | + | chr3.4:95418009-95418028 | MS.gene031245:CDS | 50.0% | |
| GATTAGACCCTGTGAAGGAG+GGG | + | chr3.4:95420033-95420052 | MS.gene031245:CDS | 50.0% | |
| GCAATTTCTCATGGTTCCCC+TGG | + | chr3.4:95419335-95419354 | MS.gene031245:CDS | 50.0% | |
| GCGGGAACACAGATCAGAAT+GGG | + | chr3.4:95421112-95421131 | MS.gene031245:CDS | 50.0% | |
| GCTCTAACAAAATGCGGCAC+TGG | - | chr3.4:95419989-95420008 | None:intergenic | 50.0% | |
| GGAACCACTGGAAACAAAGC+AGG | + | chr3.4:95422039-95422058 | MS.gene031245:CDS | 50.0% | |
| GTATCGTGATTGCCGAACTG+TGG | + | chr3.4:95419533-95419552 | MS.gene031245:CDS | 50.0% | |
| GTCCTTGTAGAATGTCCCTC+CGG | + | chr3.4:95421070-95421089 | MS.gene031245:intron | 50.0% | |
| GTTGTATGCGCCAACAACTC+TGG | + | chr3.4:95419737-95419756 | MS.gene031245:intron | 50.0% | |
| GTTTCTCAGCCAAGTGTGAC+AGG | + | chr3.4:95420387-95420406 | MS.gene031245:CDS | 50.0% | |
| GTTTGTGCTTCAGGAGTTCC+AGG | - | chr3.4:95422264-95422283 | None:intergenic | 50.0% | |
| TAACCTTCATCCCGGGCATT+TGG | - | chr3.4:95418777-95418796 | None:intergenic | 50.0% | |
| TACTGGAACCGCTGTTGAGT+GGG | + | chr3.4:95418750-95418769 | MS.gene031245:CDS | 50.0% | |
| TCAAGTGCTTCCACTTGCTC+TGG | - | chr3.4:95417758-95417777 | None:intergenic | 50.0% | |
| TCAGCAGCTGCCATTAAAGC+TGG | + | chr3.4:95421158-95421177 | MS.gene031245:CDS | 50.0% | |
| TCAGCCAAGTGTGACAGGAT+GGG | + | chr3.4:95420392-95420411 | MS.gene031245:CDS | 50.0% | |
| TCCACTCCACTACAAAGCTG+AGG | - | chr3.4:95421743-95421762 | None:intergenic | 50.0% | |
| TGACATGCTTGAAACCACCC+TGG | + | chr3.4:95422726-95422745 | MS.gene031245:CDS | 50.0% | |
| TGCGGGAACACAGATCAGAA+TGG | + | chr3.4:95421111-95421130 | MS.gene031245:CDS | 50.0% | |
| TGTTCTCTGAGCAAGCAGCA+TGG | - | chr3.4:95420228-95420247 | None:intergenic | 50.0% | |
| TGTTGCCTGCGAAGAGAAGT+TGG | - | chr3.4:95417806-95417825 | None:intergenic | 50.0% | |
| TTTGGAGGATGGCAGTCTTG+TGG | + | chr3.4:95419800-95419819 | MS.gene031245:CDS | 50.0% | |
| ! | ACAGAACTGGTGGTGACAGA+TGG | - | chr3.4:95420694-95420713 | None:intergenic | 50.0% |
| ! | CTAACAAAATGCGGCACTGG+AGG | - | chr3.4:95419986-95420005 | None:intergenic | 50.0% |
| ! | GATGCACCCATTTTGCCTTC+TGG | + | chr3.4:95421827-95421846 | MS.gene031245:CDS | 50.0% |
| ! | GCTGCGCTACACATCACTTT+TGG | + | chr3.4:95419782-95419801 | MS.gene031245:CDS | 50.0% |
| ! | TCCTCAGCTTTGTAGTGGAG+TGG | + | chr3.4:95421739-95421758 | MS.gene031245:intron | 50.0% |
| !! | AGAGCTGAAGTGTTGCCTAG+CGG | + | chr3.4:95420004-95420023 | MS.gene031245:CDS | 50.0% |
| !! | GCGCTACACATCACTTTTGG+AGG | + | chr3.4:95419785-95419804 | MS.gene031245:CDS | 50.0% |
| AACTCGTGTCCGTAGTGGCA+AGG | - | chr3.4:95418445-95418464 | None:intergenic | 55.0% | |
| ACAGACGACCCTTGCCACTA+CGG | + | chr3.4:95418433-95418452 | MS.gene031245:intron | 55.0% | |
| ACCACCAAAAGCTCCTGCTC+GGG | - | chr3.4:95421204-95421223 | None:intergenic | 55.0% | |
| ACTCGTGTCCGTAGTGGCAA+GGG | - | chr3.4:95418444-95418463 | None:intergenic | 55.0% | |
| AGCCGGAGGGACATTCTACA+AGG | - | chr3.4:95421075-95421094 | None:intergenic | 55.0% | |
| ATGGATCCCCCTCCTTCACA+GGG | - | chr3.4:95420043-95420062 | None:intergenic | 55.0% | |
| CAAGTGTGACAGGATGGGGA+AGG | + | chr3.4:95420397-95420416 | MS.gene031245:CDS | 55.0% | |
| CAGCCAAGTGTGACAGGATG+GGG | + | chr3.4:95420393-95420412 | MS.gene031245:CDS | 55.0% | |
| CCGCATCTGAGTGATGCCAA+AGG | - | chr3.4:95422481-95422500 | None:intergenic | 55.0% | |
| CGTGGGTCTTGAACCTGCAA+GGG | + | chr3.4:95419382-95419401 | MS.gene031245:CDS | 55.0% | |
| CTACTGGAACCGCTGTTGAG+TGG | + | chr3.4:95418749-95418768 | MS.gene031245:CDS | 55.0% | |
| CTCACAACTCGTGTCCGTAG+TGG | - | chr3.4:95418450-95418469 | None:intergenic | 55.0% | |
| CTCAGCCAAGTGTGACAGGA+TGG | + | chr3.4:95420391-95420410 | MS.gene031245:CDS | 55.0% | |
| CTGGGGGAATTCAGAGCACA+GGG | - | chr3.4:95422806-95422825 | None:intergenic | 55.0% | |
| CTTCCCCATCCTGTCACACT+TGG | - | chr3.4:95420399-95420418 | None:intergenic | 55.0% | |
| GACCACCAAAAGCTCCTGCT+CGG | - | chr3.4:95421205-95421224 | None:intergenic | 55.0% | |
| GCAAGATCGAGTGTGCGGTT+AGG | - | chr3.4:95422003-95422022 | None:intergenic | 55.0% | |
| GCACTTGAGGTTGGAACCAC+TGG | + | chr3.4:95422027-95422046 | MS.gene031245:CDS | 55.0% | |
| GGACACGAGTTGTGAGTCAG+TGG | + | chr3.4:95418454-95418473 | MS.gene031245:CDS | 55.0% | |
| GGCACATAGCACAGAACTGG+TGG | - | chr3.4:95420704-95420723 | None:intergenic | 55.0% | |
| GTCTTGAAGTGCAACCAGGG+TGG | - | chr3.4:95422743-95422762 | None:intergenic | 55.0% | |
| GTTGAGTGGGTCCAAATGCC+CGG | + | chr3.4:95418763-95418782 | MS.gene031245:CDS | 55.0% | |
| TAGCCTGGTCCGGATTCCAT+TGG | + | chr3.4:95419305-95419324 | MS.gene031245:intron | 55.0% | |
| TATGGATCCCCCTCCTTCAC+AGG | - | chr3.4:95420044-95420063 | None:intergenic | 55.0% | |
| TCGTGGGTCTTGAACCTGCA+AGG | + | chr3.4:95419381-95419400 | MS.gene031245:CDS | 55.0% | |
| TCTGGGGGAATTCAGAGCAC+AGG | - | chr3.4:95422807-95422826 | None:intergenic | 55.0% | |
| TGTGCTTCAGGAGTTCCAGG+TGG | - | chr3.4:95422261-95422280 | None:intergenic | 55.0% | |
| TTCTCATGGTTCCCCTGGAG+TGG | + | chr3.4:95419340-95419359 | MS.gene031245:CDS | 55.0% | |
| TTGAGTGGGTCCAAATGCCC+GGG | + | chr3.4:95418764-95418783 | MS.gene031245:CDS | 55.0% | |
| TTGCAGGTTCAAGACCCACG+AGG | - | chr3.4:95419382-95419401 | None:intergenic | 55.0% | |
| ! | AGTTATTGGCCTCCCCATGC+TGG | - | chr3.4:95423058-95423077 | None:intergenic | 55.0% |
| ! | CTGGTCCATGTAGCTTGCCA+GGG | + | chr3.4:95421177-95421196 | MS.gene031245:CDS | 55.0% |
| ! | GCACTTTCCCCTTCGCGTTT+TGG | + | chr3.4:95422213-95422232 | MS.gene031245:CDS | 55.0% |
| ! | TGGTCCATGTAGCTTGCCAG+GGG | + | chr3.4:95421178-95421197 | MS.gene031245:CDS | 55.0% |
| !! | ACCCCCTGCTTTGTTTCCAG+TGG | - | chr3.4:95422046-95422065 | None:intergenic | 55.0% |
| !! | AGCAGGAGCTTTTGGTGGTC+AGG | + | chr3.4:95421205-95421224 | MS.gene031245:CDS | 55.0% |
| AGCAACCAGAAGTCGCGACC+TGG | - | chr3.4:95419765-95419784 | None:intergenic | 60.0% | |
| CAAGGGATGCAAGCCCTGCT+GGG | + | chr3.4:95418501-95418520 | MS.gene031245:CDS | 60.0% | |
| CGGTCAGCAGCATCCACCAA+GGG | + | chr3.4:95418484-95418503 | MS.gene031245:CDS | 60.0% | |
| CTAAGCGCACGTAGAGCTGC+AGG | - | chr3.4:95420426-95420445 | None:intergenic | 60.0% | |
| GCAGGTGCAGAGAGAAGCAG+AGG | + | chr3.4:95417998-95418017 | MS.gene031245:intron | 60.0% | |
| GGAGTGGACGAGCATGCAGT+TGG | + | chr3.4:95421755-95421774 | MS.gene031245:CDS | 60.0% | |
| GGTCCAAATGCCCGGGATGA+AGG | + | chr3.4:95418771-95418790 | MS.gene031245:CDS | 60.0% | |
| GTGTGACAGGATGGGGAAGG+CGG | + | chr3.4:95420400-95420419 | MS.gene031245:CDS | 60.0% | |
| ! | CGACCTGGTGCCAGAGTTGT+TGG | - | chr3.4:95419750-95419769 | None:intergenic | 60.0% |
| ! | GCTGGTCCATGTAGCTTGCC+AGG | + | chr3.4:95421176-95421195 | MS.gene031245:CDS | 60.0% |
| ! | TGCGGCACTGGAGGCATACT+AGG | - | chr3.4:95419977-95419996 | None:intergenic | 60.0% |
| AGGCACGTGCAGCCACTCCA+GGG | - | chr3.4:95419355-95419374 | None:intergenic | 65.0% | |
| CCAAGGGATGCAAGCCCTGC+TGG | + | chr3.4:95418500-95418519 | MS.gene031245:CDS | 65.0% | |
| CCAGCAGGGCTTGCATCCCT+TGG | - | chr3.4:95418503-95418522 | None:intergenic | 65.0% | |
| GCAGGGCTTGCATCCCTTGG+TGG | - | chr3.4:95418500-95418519 | None:intergenic | 65.0% | |
| GCGCCAACAACTCTGGCACC+AGG | + | chr3.4:95419744-95419763 | MS.gene031245:CDS | 65.0% | |
| GCGGTCAGCAGCATCCACCA+AGG | + | chr3.4:95418483-95418502 | MS.gene031245:CDS | 65.0% | |
| TGGCACCAGGTCGCGACTTC+TGG | + | chr3.4:95419757-95419776 | MS.gene031245:CDS | 65.0% | |
| TTCAAGACCCACGAGGCCGC+AGG | - | chr3.4:95419375-95419394 | None:intergenic | 65.0% | |
| ! | GCCCGAGCAGGAGCTTTTGG+TGG | + | chr3.4:95421200-95421219 | MS.gene031245:CDS | 65.0% |
| AAAGCTCCTGCTCGGGCCCC+TGG | - | chr3.4:95421197-95421216 | None:intergenic | 70.0% | |
| CAGGCACGTGCAGCCACTCC+AGG | - | chr3.4:95419356-95419375 | None:intergenic | 70.0% | |
| CGGGCCCCTGGCAAGCTACA+TGG | - | chr3.4:95421185-95421204 | None:intergenic | 70.0% | |
| GGAGTGGCTGCACGTGCCTG+CGG | + | chr3.4:95419356-95419375 | MS.gene031245:CDS | 70.0% | |
| GGCACGTGCAGCCACTCCAG+GGG | - | chr3.4:95419354-95419373 | None:intergenic | 70.0% | |
| ! | GGGGCCCGAGCAGGAGCTTT+TGG | + | chr3.4:95421197-95421216 | MS.gene031245:CDS | 70.0% |
| AGCTTGCCAGGGGCCCGAGC+AGG | + | chr3.4:95421188-95421207 | MS.gene031245:CDS | 75.0% | |
| GCACGTGCCTGCGGCCTCGT+GGG | + | chr3.4:95419365-95419384 | MS.gene031245:CDS | 75.0% | |
| TGCACGTGCCTGCGGCCTCG+TGG | + | chr3.4:95419364-95419383 | MS.gene031245:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 95417680 | 95423167 | 95417680 | ID=MS.gene031245 |
| chr3.4 | mRNA | 95417680 | 95423167 | 95417680 | ID=MS.gene031245.t1;Parent=MS.gene031245 |
| chr3.4 | exon | 95417680 | 95417897 | 95417680 | ID=MS.gene031245.t1.exon1;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95417680 | 95417897 | 95417680 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95418002 | 95418161 | 95418002 | ID=MS.gene031245.t1.exon2;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95418002 | 95418161 | 95418002 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95418437 | 95418522 | 95418437 | ID=MS.gene031245.t1.exon3;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95418437 | 95418522 | 95418437 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95418702 | 95418792 | 95418702 | ID=MS.gene031245.t1.exon4;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95418702 | 95418792 | 95418702 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95419308 | 95419403 | 95419308 | ID=MS.gene031245.t1.exon5;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95419308 | 95419403 | 95419308 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95419501 | 95419614 | 95419501 | ID=MS.gene031245.t1.exon6;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95419501 | 95419614 | 95419501 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95419738 | 95419821 | 95419738 | ID=MS.gene031245.t1.exon7;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95419738 | 95419821 | 95419738 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95419938 | 95420093 | 95419938 | ID=MS.gene031245.t1.exon8;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95419938 | 95420093 | 95419938 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95420182 | 95420256 | 95420182 | ID=MS.gene031245.t1.exon9;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95420182 | 95420256 | 95420182 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95420354 | 95420460 | 95420354 | ID=MS.gene031245.t1.exon10;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95420354 | 95420460 | 95420354 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95420549 | 95420744 | 95420549 | ID=MS.gene031245.t1.exon11;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95420549 | 95420744 | 95420549 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95421080 | 95421265 | 95421080 | ID=MS.gene031245.t1.exon12;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95421080 | 95421265 | 95421080 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95421408 | 95421488 | 95421408 | ID=MS.gene031245.t1.exon13;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95421408 | 95421488 | 95421408 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95421746 | 95421880 | 95421746 | ID=MS.gene031245.t1.exon14;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95421746 | 95421880 | 95421746 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95421988 | 95422313 | 95421988 | ID=MS.gene031245.t1.exon15;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95421988 | 95422313 | 95421988 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95422421 | 95422520 | 95422421 | ID=MS.gene031245.t1.exon16;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95422421 | 95422520 | 95422421 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95422688 | 95422837 | 95422688 | ID=MS.gene031245.t1.exon17;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95422688 | 95422837 | 95422688 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| chr3.4 | exon | 95423021 | 95423167 | 95423021 | ID=MS.gene031245.t1.exon18;Parent=MS.gene031245.t1 |
| chr3.4 | CDS | 95423021 | 95423167 | 95423021 | ID=cds.MS.gene031245.t1;Parent=MS.gene031245.t1 |
| Gene Sequence |
| Protein sequence |
