AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031961

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031961.t1 MTR_3g070860 98.329 359 6 0 1 359 1 359 0.0 737
MS.gene031961.t1 MTR_5g082750 78.090 356 78 0 4 359 3 358 0.0 583
MS.gene031961.t1 MTR_4g015790 63.172 372 123 2 2 359 1 372 0.0 511
MS.gene031961.t1 MTR_7g068650 64.917 362 122 2 1 357 1 362 0.0 509
MS.gene031961.t1 MTR_2g072910 36.550 342 212 3 15 356 17 353 2.12e-79 247
MS.gene031961.t1 MTR_5g055900 35.942 345 214 3 15 359 13 350 3.19e-79 246
MS.gene031961.t1 MTR_3g092890 43.131 313 167 5 26 337 15 317 1.41e-78 244
MS.gene031961.t1 MTR_3g072810 38.602 329 191 4 12 338 3 322 1.65e-78 244
MS.gene031961.t1 MTR_0009s0050 36.842 342 209 3 15 356 13 347 2.01e-78 245
MS.gene031961.t1 MTR_0009s0050 36.842 342 209 3 15 356 13 347 2.67e-78 244
MS.gene031961.t1 MTR_7g062570 35.260 346 218 2 11 356 16 355 4.03e-78 244
MS.gene031961.t1 MTR_3g063180 38.068 352 200 8 13 355 8 350 1.54e-77 242
MS.gene031961.t1 MTR_5g048550 35.860 343 211 4 15 356 13 347 1.85e-77 242
MS.gene031961.t1 MTR_5g048570 34.795 342 214 3 15 356 13 345 2.62e-77 242
MS.gene031961.t1 MTR_2g072890 36.443 343 212 4 15 356 17 354 3.75e-77 241
MS.gene031961.t1 MTR_7g062550 36.023 347 214 3 11 356 21 360 5.50e-77 241
MS.gene031961.t1 MTR_7g062580 36.086 327 203 2 11 337 16 336 3.89e-76 239
MS.gene031961.t1 MTR_5g055680 35.380 342 214 3 15 356 13 347 5.46e-76 238
MS.gene031961.t1 MTR_5g011250 37.651 332 198 5 14 337 7 337 1.04e-75 238
MS.gene031961.t1 MTR_8g024120 40.356 337 193 5 21 356 13 342 1.41e-75 237
MS.gene031961.t1 MTR_0328s0030 37.771 323 194 3 15 337 11 326 4.90e-75 236
MS.gene031961.t1 MTR_7g063730 34.971 346 219 2 11 356 25 364 1.00e-74 236
MS.gene031961.t1 MTR_2g437380 35.802 324 203 3 15 337 17 336 1.30e-74 235
MS.gene031961.t1 MTR_5g048740 35.494 324 201 4 15 337 11 327 2.41e-74 234
MS.gene031961.t1 MTR_8g064200 33.626 342 221 3 15 356 18 353 5.46e-74 233
MS.gene031961.t1 MTR_8g064200 33.626 342 221 3 15 356 23 358 6.11e-74 233
MS.gene031961.t1 MTR_7g062600 34.593 344 218 3 11 353 12 349 7.00e-74 233
MS.gene031961.t1 MTR_5g048470 33.043 345 226 2 15 359 18 357 7.12e-74 233
MS.gene031961.t1 MTR_5g055820 35.735 347 207 5 15 356 13 348 2.09e-73 232
MS.gene031961.t1 MTR_5g048850 35.673 342 213 3 15 356 13 347 3.13e-72 229
MS.gene031961.t1 MTR_5g055800 36.111 324 197 5 15 337 13 327 2.56e-71 226
MS.gene031961.t1 MTR_1g033810 35.238 315 200 2 23 337 20 330 2.16e-70 224
MS.gene031961.t1 MTR_0009s0480 36.991 319 192 4 15 332 12 322 3.17e-70 223
MS.gene031961.t1 MTR_5g055690 35.260 346 216 4 15 359 13 351 3.01e-69 221
MS.gene031961.t1 MTR_5g059130 35.650 331 201 5 12 337 3 326 1.80e-67 216
MS.gene031961.t1 MTR_2g025120 36.129 310 185 6 49 355 3 302 5.16e-66 211
MS.gene031961.t1 MTR_3g072820 34.969 326 203 4 14 337 6 324 8.51e-66 211
MS.gene031961.t1 MTR_3g083370 36.218 312 186 6 49 358 3 303 1.33e-65 210
MS.gene031961.t1 MTR_5g085330 36.593 317 184 7 48 358 3 308 7.25e-65 209
MS.gene031961.t1 MTR_8g074050 36.455 299 182 3 44 337 46 341 2.01e-63 206
MS.gene031961.t1 MTR_8g075890 36.792 318 190 8 25 338 15 325 2.46e-63 206
MS.gene031961.t1 MTR_8g075830 37.304 319 187 9 25 338 15 325 4.38e-63 205
MS.gene031961.t1 MTR_1g062110 35.493 355 207 9 15 356 27 372 6.86e-63 205
MS.gene031961.t1 MTR_3g117420 36.014 286 180 2 44 329 46 328 1.35e-62 204
MS.gene031961.t1 MTR_3g026150 35.347 331 205 5 15 342 24 348 3.51e-62 203
MS.gene031961.t1 MTR_5g022020 35.976 328 197 9 15 338 7 325 5.12e-62 202
MS.gene031961.t1 MTR_4g087090 35.777 341 198 10 29 356 11 343 5.84e-62 202
MS.gene031961.t1 MTR_4g116010 37.234 282 170 2 48 329 48 322 7.05e-62 202
MS.gene031961.t1 MTR_5g059140 33.962 318 198 5 14 326 5 315 4.06e-61 199
MS.gene031961.t1 MTR_3g088565 36.486 296 168 6 50 337 3 286 5.70e-61 198
MS.gene031961.t1 MTR_3g058610 36.076 316 192 7 24 336 14 322 2.81e-60 198
MS.gene031961.t1 MTR_7g045650 36.604 265 162 2 26 290 36 294 3.74e-60 196
MS.gene031961.t1 MTR_8g008930 32.410 361 227 7 2 356 15 364 6.56e-60 197
MS.gene031961.t1 MTR_8g074070 36.364 286 179 2 44 329 46 328 6.97e-60 197
MS.gene031961.t1 MTR_7g102820 33.146 356 211 7 20 356 32 379 8.55e-59 195
MS.gene031961.t1 MTR_6g015950 36.697 327 189 7 25 346 15 328 8.84e-59 193
MS.gene031961.t1 MTR_1g070120 35.220 318 193 8 23 337 12 319 1.77e-58 193
MS.gene031961.t1 MTR_1g034120 33.718 347 202 10 30 356 8 346 2.39e-58 192
MS.gene031961.t1 MTR_3g091350 33.438 317 202 4 26 340 35 344 2.66e-58 193
MS.gene031961.t1 MTR_1g034060 33.718 347 202 10 30 356 8 346 9.78e-58 191
MS.gene031961.t1 MTR_3g117485 32.448 339 220 6 15 349 13 346 1.49e-57 191
MS.gene031961.t1 MTR_1g102070 35.016 317 193 5 25 334 37 347 1.68e-57 191
MS.gene031961.t1 MTR_2g072910 35.955 267 166 3 15 281 17 278 2.81e-57 187
MS.gene031961.t1 MTR_3g091360 34.494 316 198 4 26 339 28 336 3.01e-57 190
MS.gene031961.t1 MTR_1g070135 34.177 316 197 7 25 338 14 320 5.46e-57 189
MS.gene031961.t1 MTR_2g437380 37.705 244 149 2 95 337 1 242 9.80e-57 186
MS.gene031961.t1 MTR_7g081710 35.542 332 195 9 17 341 16 335 1.05e-56 188
MS.gene031961.t1 MTR_4g087140 32.670 352 212 11 23 356 1 345 3.75e-56 187
MS.gene031961.t1 MTR_8g028435 31.111 360 234 6 1 356 14 363 3.88e-56 187
MS.gene031961.t1 MTR_4g087110 34.104 346 200 11 30 356 8 344 6.57e-56 186
MS.gene031961.t1 MTR_8g009160 31.111 360 234 6 1 356 14 363 8.25e-56 186
MS.gene031961.t1 MTR_8g009110 31.389 360 234 7 1 356 14 364 8.65e-56 186
MS.gene031961.t1 MTR_5g032870 36.076 316 195 6 25 337 14 325 9.97e-56 186
MS.gene031961.t1 MTR_5g065010 32.075 318 205 6 23 337 13 322 1.97e-55 185
MS.gene031961.t1 MTR_8g009090 31.111 360 232 7 2 356 15 363 2.27e-55 185
MS.gene031961.t1 MTR_5g048850 36.090 266 163 3 15 280 13 271 2.65e-55 182
MS.gene031961.t1 MTR_7g016090 34.251 327 196 6 25 346 15 327 3.75e-55 184
MS.gene031961.t1 MTR_7g016090 34.251 327 196 6 25 346 17 329 3.92e-55 184
MS.gene031961.t1 MTR_1g034140 34.637 358 189 12 21 356 2 336 4.01e-55 184
MS.gene031961.t1 MTR_0009s0050 36.694 248 155 1 109 356 4 249 5.68e-55 181
MS.gene031961.t1 MTR_0009s0050 36.694 248 155 1 109 356 4 249 7.56e-55 181
MS.gene031961.t1 MTR_8g074070 35.664 286 162 3 44 329 46 309 1.52e-54 182
MS.gene031961.t1 MTR_7g062560 34.951 309 183 5 49 356 61 352 2.12e-54 182
MS.gene031961.t1 MTR_8g009170 31.111 360 234 7 2 356 15 365 4.88e-54 182
MS.gene031961.t1 MTR_2g069300 31.792 346 225 5 15 356 19 357 8.57e-54 181
MS.gene031961.t1 MTR_5g032880 35.258 329 190 8 16 337 5 317 1.14e-53 188
MS.gene031961.t1 MTR_5g032880 36.000 325 183 8 25 337 352 663 8.61e-52 182
MS.gene031961.t1 MTR_2g069210 32.312 359 231 7 2 356 16 366 1.70e-53 181
MS.gene031961.t1 MTR_1g032140 34.412 340 208 8 2 337 17 345 1.79e-53 181
MS.gene031961.t1 MTR_4g117880 32.277 347 216 10 1 340 14 348 1.94e-53 180
MS.gene031961.t1 MTR_6g464620 33.754 317 197 5 25 334 42 352 2.69e-53 181
MS.gene031961.t1 MTR_4g093840 33.521 355 219 8 11 356 19 365 5.04e-53 179
MS.gene031961.t1 MTR_2g069190 32.033 359 232 6 2 356 20 370 5.13e-53 179
MS.gene031961.t1 MTR_4g087100 33.231 325 193 8 50 356 26 344 5.64e-53 179
MS.gene031961.t1 MTR_4g087120 35.216 301 166 9 50 329 26 318 5.82e-53 179
MS.gene031961.t1 MTR_3g117485 34.432 273 173 4 79 349 6 274 1.74e-52 175
MS.gene031961.t1 MTR_5g055690 35.472 265 163 4 15 278 13 270 1.81e-52 175
MS.gene031961.t1 MTR_1g070080 34.161 322 199 6 23 342 11 321 1.99e-52 177
MS.gene031961.t1 MTR_7g105070 32.514 366 221 9 2 356 11 361 2.79e-52 177
MS.gene031961.t1 MTR_2g069090 30.919 359 237 6 2 356 20 371 2.99e-52 177
MS.gene031961.t1 MTR_0009s0480 35.094 265 163 4 15 278 12 268 5.12e-52 174
MS.gene031961.t1 MTR_1g070085 34.906 318 195 7 23 337 11 319 2.33e-51 174
MS.gene031961.t1 MTR_1g070085 34.906 318 195 7 23 337 11 319 2.33e-51 174
MS.gene031961.t1 MTR_0056s0160 35.193 233 149 1 124 356 2 232 2.41e-50 168
MS.gene031961.t1 MTR_1g070185 31.445 353 213 7 3 345 22 355 2.97e-50 172
MS.gene031961.t1 MTR_8g009080 32.258 341 217 7 15 350 59 390 3.13e-50 173
MS.gene031961.t1 MTR_2g068950 31.421 366 221 11 6 356 18 368 4.15e-50 172
MS.gene031961.t1 MTR_3g043900 33.046 348 214 9 15 356 18 352 5.72e-50 171
MS.gene031961.t1 MTR_1g032220 32.059 340 216 9 2 337 24 352 6.52e-50 171
MS.gene031961.t1 MTR_6g092620 36.918 279 159 8 50 323 3 269 6.55e-50 169
MS.gene031961.t1 MTR_8g062600 31.646 316 201 6 48 356 65 372 1.80e-49 170
MS.gene031961.t1 MTR_4g087130 37.037 297 165 9 50 329 26 317 2.42e-49 169
MS.gene031961.t1 MTR_1g032250 32.059 340 216 9 2 337 24 352 2.89e-49 169
MS.gene031961.t1 MTR_2g068960 31.436 369 217 12 6 356 18 368 4.34e-49 169
MS.gene031961.t1 MTR_2g069010 30.055 366 230 10 6 358 24 376 1.08e-48 168
MS.gene031961.t1 MTR_0032s0040 31.283 374 214 11 2 352 15 368 1.62e-48 168
MS.gene031961.t1 MTR_1g062110 36.462 277 154 9 15 278 27 294 2.77e-48 166
MS.gene031961.t1 MTR_1g093140 29.714 350 226 8 19 356 36 377 3.41e-48 167
MS.gene031961.t1 MTR_2g102570 34.130 293 177 5 50 337 52 333 3.44e-48 167
MS.gene031961.t1 MTR_4g024660 29.201 363 231 9 6 356 24 372 3.72e-48 167
MS.gene031961.t1 MTR_3g026150 35.537 242 152 2 103 342 6 245 4.49e-48 163
MS.gene031961.t1 MTR_8g063070 29.248 359 230 9 6 353 24 369 5.67e-48 166
MS.gene031961.t1 MTR_7g016080 32.927 328 193 8 25 346 15 321 1.19e-47 164
MS.gene031961.t1 MTR_2g069060 32.381 315 202 7 44 356 43 348 1.88e-47 164
MS.gene031961.t1 MTR_8g033380 30.303 330 194 5 23 334 30 341 2.45e-47 164
MS.gene031961.t1 MTR_2g068840 32.353 340 203 9 12 337 15 341 2.54e-47 164
MS.gene031961.t1 MTR_7g029655 31.044 364 225 11 2 352 15 365 3.93e-47 164
MS.gene031961.t1 MTR_3g045230 31.805 349 218 9 15 356 18 353 6.47e-47 163
MS.gene031961.t1 MTR_7g056347 30.114 352 224 9 15 356 33 372 1.95e-46 162
MS.gene031961.t1 MTR_1g093110 30.194 361 234 9 6 356 21 373 2.12e-46 162
MS.gene031961.t1 MTR_3g026150 34.717 265 166 4 15 278 24 282 4.92e-46 159
MS.gene031961.t1 MTR_2g025120 35.498 231 138 4 49 278 3 223 4.98e-46 157
MS.gene031961.t1 MTR_1g093120 30.435 322 208 7 41 356 58 369 6.56e-46 160
MS.gene031961.t1 MTR_3g088745 32.573 307 195 7 44 342 30 332 3.00e-45 159
MS.gene031961.t1 MTR_2g083000 33.876 307 182 10 35 338 18 306 4.92e-45 157
MS.gene031961.t1 MTR_2g069020 29.586 338 224 8 6 337 22 351 5.77e-45 158
MS.gene031961.t1 MTR_2g069020 29.586 338 224 8 6 337 22 351 1.15e-44 158
MS.gene031961.t1 MTR_4g074130 33.333 294 179 9 47 338 37 315 1.70e-44 156
MS.gene031961.t1 MTR_7g102720 32.476 311 195 7 49 356 36 334 1.86e-44 156
MS.gene031961.t1 MTR_1g081840 32.362 309 189 4 46 342 49 349 2.06e-44 157
MS.gene031961.t1 MTR_1g043770 29.589 365 230 8 2 356 7 354 2.12e-44 156
MS.gene031961.t1 MTR_1g043775 30.435 368 225 9 2 356 7 356 3.41e-44 156
MS.gene031961.t1 MTR_3g083370 35.065 231 139 4 49 278 3 223 4.21e-44 152
MS.gene031961.t1 MTR_3g096500 31.546 317 204 6 25 334 44 354 1.07e-43 155
MS.gene031961.t1 MTR_7g451860 32.558 301 183 8 46 342 37 321 1.11e-43 154
MS.gene031961.t1 MTR_7g047670 32.558 301 183 8 46 342 37 321 1.11e-43 154
MS.gene031961.t1 MTR_1g043760 30.882 340 221 7 2 337 7 336 2.74e-43 153
MS.gene031961.t1 MTR_1g043810 29.348 368 229 9 2 356 7 356 2.90e-43 153
MS.gene031961.t1 MTR_8g093930 29.545 352 226 12 2 344 5 343 3.60e-43 153
MS.gene031961.t1 MTR_2g083030 32.082 293 177 9 50 338 37 311 9.25e-43 151
MS.gene031961.t1 MTR_1g070135 35.547 256 154 7 25 278 14 260 1.88e-42 149
MS.gene031961.t1 MTR_4g115990 31.560 282 169 3 48 329 44 301 2.03e-42 150
MS.gene031961.t1 MTR_8g041620 31.385 325 202 9 15 329 33 346 2.41e-42 152
MS.gene031961.t1 MTR_5g005570 32.343 303 178 9 46 342 33 314 4.24e-42 150
MS.gene031961.t1 MTR_8g041600 30.154 325 206 8 15 329 33 346 1.32e-41 149
MS.gene031961.t1 MTR_3g464530 32.787 305 153 8 50 338 34 302 1.49e-41 148
MS.gene031961.t1 MTR_1g048940 29.855 345 221 11 20 356 18 349 2.30e-41 148
MS.gene031961.t1 MTR_0009s0050 43.046 151 86 0 206 356 17 167 4.10e-41 142
MS.gene031961.t1 MTR_8g009150 27.247 356 226 6 1 352 14 340 6.33e-41 147
MS.gene031961.t1 MTR_8g006930 29.805 359 234 9 6 356 24 372 1.35e-40 147
MS.gene031961.t1 MTR_2g019370 31.333 300 182 10 50 338 28 314 1.44e-40 145
MS.gene031961.t1 MTR_8g009120 28.611 360 232 7 1 356 14 352 1.76e-40 146
MS.gene031961.t1 MTR_8g009170 30.986 284 186 5 2 284 15 289 3.49e-40 144
MS.gene031961.t1 MTR_7g078010 31.481 324 203 9 42 356 59 372 1.04e-39 144
MS.gene031961.t1 MTR_8g469400 28.691 359 225 10 6 356 24 359 1.48e-39 144
MS.gene031961.t1 MTR_4g119410 28.775 351 230 9 15 356 33 372 2.45e-39 143
MS.gene031961.t1 MTR_8g093980 30.693 303 193 7 43 336 52 346 6.58e-38 140
MS.gene031961.t1 MTR_1g070085 33.878 245 156 4 95 337 1 241 7.33e-37 134
MS.gene031961.t1 MTR_2g069060 33.469 245 152 6 35 278 14 248 1.32e-36 133
MS.gene031961.t1 MTR_3g040410 32.107 299 190 9 50 345 6 294 1.43e-36 134
MS.gene031961.t1 MTR_7g056393 29.917 361 231 11 6 356 24 372 1.55e-36 136
MS.gene031961.t1 MTR_1g070100 39.326 178 105 2 159 336 62 236 3.27e-36 132
MS.gene031961.t1 MTR_8g461330 29.508 305 182 9 50 338 27 314 3.65e-36 134
MS.gene031961.t1 MTR_4g132770 47.244 127 65 1 213 337 28 154 5.58e-36 129
MS.gene031961.t1 MTR_2g068800 30.719 306 166 11 1 292 4 277 1.20e-35 131
MS.gene031961.t1 MTR_8g009080 31.321 265 171 6 15 277 59 314 2.64e-35 132
MS.gene031961.t1 MTR_4g123020 30.333 300 181 9 50 338 20 302 2.72e-35 131
MS.gene031961.t1 MTR_8g102600 32.248 307 179 10 52 337 11 309 7.90e-35 130
MS.gene031961.t1 MTR_8g009080 31.298 262 169 6 15 274 59 311 1.93e-34 129
MS.gene031961.t1 MTR_7g056353 29.885 348 202 6 15 356 35 346 3.36e-34 132
MS.gene031961.t1 MTR_2g070870 28.571 301 183 10 49 338 27 306 8.60e-34 127
MS.gene031961.t1 MTR_1g011580 28.440 327 206 9 3 316 7 318 1.38e-33 127
MS.gene031961.t1 MTR_6g088665 30.769 325 192 12 35 337 8 321 2.62e-33 126
MS.gene031961.t1 MTR_1g043770 30.496 282 174 6 2 277 7 272 3.02e-33 125
MS.gene031961.t1 MTR_6g088665 30.793 328 187 13 35 337 8 320 9.66e-33 125
MS.gene031961.t1 MTR_0009s0400 41.935 124 72 0 214 337 1 124 2.38e-32 119
MS.gene031961.t1 MTR_1g043775 29.968 317 193 9 2 307 7 305 5.35e-32 122
MS.gene031961.t1 MTR_2g033270 30.000 300 184 9 48 338 17 299 2.89e-31 120
MS.gene031961.t1 MTR_8g041600 29.478 268 176 6 15 278 33 291 3.63e-31 120
MS.gene031961.t1 MTR_1g027290 28.339 307 188 8 47 336 26 317 4.46e-31 120
MS.gene031961.t1 MTR_1g043810 30.420 286 171 8 2 277 7 274 5.87e-31 120
MS.gene031961.t1 MTR_1g086550 27.950 322 204 9 34 338 4 314 7.64e-31 120
MS.gene031961.t1 MTR_4g096840 27.451 306 199 11 43 338 22 314 9.39e-30 117
MS.gene031961.t1 MTR_1g027310 27.458 295 158 7 50 336 49 295 3.39e-29 115
MS.gene031961.t1 MTR_3g464530 31.429 245 126 7 50 278 34 252 5.33e-29 113
MS.gene031961.t1 MTR_4g100600 29.373 303 191 9 48 337 7 299 3.28e-28 112
MS.gene031961.t1 MTR_8g030880 27.796 313 193 10 42 340 2 295 4.79e-28 112
MS.gene031961.t1 MTR_7g078010 31.092 238 155 6 42 278 59 288 1.06e-26 108
MS.gene031961.t1 MTR_4g100590 28.239 301 192 8 48 337 7 294 1.11e-26 108
MS.gene031961.t1 MTR_5g027230 28.571 280 167 10 71 338 21 279 3.54e-26 106
MS.gene031961.t1 MTR_1g070110 31.048 248 132 6 95 337 1 214 1.43e-25 103
MS.gene031961.t1 MTR_0009s0410 32.680 153 98 2 15 167 12 159 7.57e-25 99.4
MS.gene031961.t1 MTR_5g025050 28.231 294 186 10 50 338 5 278 7.60e-25 103
MS.gene031961.t1 MTR_2g072930 34.228 149 95 2 15 163 17 162 9.21e-25 99.4
MS.gene031961.t1 MTR_8g009180 30.864 243 148 5 126 352 51 289 1.43e-24 102
MS.gene031961.t1 MTR_5g025090 26.027 292 197 7 49 338 4 278 3.03e-24 101
MS.gene031961.t1 MTR_8g102600 31.439 264 155 9 95 337 1 259 4.90e-24 100
MS.gene031961.t1 MTR_5g025060 26.962 293 172 9 47 338 3 254 2.94e-23 98.2
MS.gene031961.t1 MTR_7g077670 29.167 240 152 8 76 306 31 261 5.04e-23 98.2
MS.gene031961.t1 MTR_4g011690 28.082 292 183 9 50 329 9 285 3.94e-22 95.5
MS.gene031961.t1 MTR_5g024940 26.667 270 166 7 71 338 21 260 3.41e-21 92.4
MS.gene031961.t1 MTR_1g032240 45.545 101 44 3 209 308 56 146 6.67e-21 89.0
MS.gene031961.t1 MTR_4g011720 24.919 309 200 9 50 344 9 299 9.94e-21 91.7
MS.gene031961.t1 MTR_7g090520 27.445 317 202 12 50 352 10 312 7.14e-20 89.4
MS.gene031961.t1 MTR_1g043840 33.523 176 107 3 169 337 51 223 2.55e-19 88.2
MS.gene031961.t1 MTR_3g108520 24.919 309 199 9 47 337 4 297 4.99e-19 87.0
MS.gene031961.t1 MTR_4g021360 23.856 306 194 13 69 355 27 312 3.79e-16 78.6
MS.gene031961.t1 MTR_4g100590 26.378 254 169 7 95 337 1 247 9.61e-16 76.6
MS.gene031961.t1 MTR_4g021380 23.226 310 206 10 46 337 3 298 1.98e-15 76.6
MS.gene031961.t1 MTR_4g094900 26.244 221 143 5 49 252 7 224 5.59e-15 74.3
MS.gene031961.t1 MTR_4g132765 31.410 156 97 3 50 205 4 149 3.09e-14 74.7
MS.gene031961.t1 MTR_1g011600 24.281 313 194 13 38 332 9 296 3.80e-14 72.4
MS.gene031961.t1 MTR_4g100600 29.630 216 133 8 48 254 7 212 4.26e-14 71.2
MS.gene031961.t1 MTR_2g068850 29.714 175 101 7 12 171 15 182 5.01e-14 70.9
MS.gene031961.t1 MTR_4g011720 24.427 262 163 11 50 295 9 251 1.63e-12 67.4
MS.gene031961.t1 MTR_6g035160 31.858 113 74 3 227 337 48 159 1.97e-12 65.5
MS.gene031961.t1 MTR_7g056370 26.486 185 129 4 15 198 12 190 1.18e-11 63.9
MS.gene031961.t1 MTR_3g040440 44.286 70 38 1 226 295 14 82 3.25e-11 63.5
MS.gene031961.t1 MTR_8g014330 22.642 265 186 6 61 310 71 331 5.46e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031961.t1 AT5G05600 69.382 356 109 0 4 359 16 371 0.0 523
MS.gene031961.t1 AT3G11180 69.748 357 98 4 8 359 49 400 0.0 522
MS.gene031961.t1 AT3G11180 70.262 343 92 4 8 345 49 386 0.0 508
MS.gene031961.t1 AT3G55970 64.345 359 123 3 6 359 5 363 3.56e-172 483
MS.gene031961.t1 AT2G38240 57.429 350 142 3 8 355 5 349 1.26e-152 434
MS.gene031961.t1 AT5G05600 68.727 275 86 0 4 278 16 290 8.55e-141 401
MS.gene031961.t1 AT3G55970 65.468 278 91 3 6 278 5 282 6.42e-132 379
MS.gene031961.t1 AT4G10500 42.357 314 172 6 26 337 20 326 1.29e-75 237
MS.gene031961.t1 AT4G22880 36.578 339 202 6 14 340 6 343 4.22e-75 236
MS.gene031961.t1 AT4G22880 36.578 339 202 6 14 340 6 343 4.22e-75 236
MS.gene031961.t1 AT4G22880 36.578 339 202 6 14 340 6 343 4.22e-75 236
MS.gene031961.t1 AT4G10490 40.000 320 182 6 21 337 13 325 5.51e-74 233
MS.gene031961.t1 AT1G17020 34.211 342 221 2 16 356 19 357 1.76e-73 232
MS.gene031961.t1 AT4G25300 33.626 342 222 3 16 356 18 355 5.11e-73 231
MS.gene031961.t1 AT1G78550 31.921 354 235 3 5 356 6 355 9.86e-72 228
MS.gene031961.t1 AT3G21420 36.280 328 202 4 15 337 17 342 4.22e-71 226
MS.gene031961.t1 AT5G24530 37.736 318 182 7 25 337 14 320 4.84e-71 225
MS.gene031961.t1 AT1G17010 33.518 361 230 5 2 356 1 357 1.04e-70 225
MS.gene031961.t1 AT4G16330 39.683 315 170 7 46 355 63 362 5.40e-70 223
MS.gene031961.t1 AT4G25310 36.655 281 174 2 76 356 76 352 1.02e-65 212
MS.gene031961.t1 AT3G51240 38.462 312 180 8 29 336 18 321 3.02e-65 211
MS.gene031961.t1 AT1G12010 34.603 315 192 6 47 359 4 306 7.05e-64 206
MS.gene031961.t1 AT5G54000 35.714 322 198 4 24 340 17 334 9.03e-64 207
MS.gene031961.t1 AT5G08640 35.152 330 203 5 12 337 3 325 7.98e-63 204
MS.gene031961.t1 AT5G08640 35.152 330 203 5 12 337 3 325 7.98e-63 204
MS.gene031961.t1 AT2G36690 34.670 349 214 8 15 356 21 362 3.66e-61 201
MS.gene031961.t1 AT2G36690 34.670 349 214 8 15 356 21 362 3.66e-61 201
MS.gene031961.t1 AT1G62380 35.032 314 190 8 47 358 4 305 6.48e-61 198
MS.gene031961.t1 AT3G13610 33.046 348 213 7 15 356 27 360 1.54e-60 199
MS.gene031961.t1 AT3G60290 34.783 345 209 8 18 356 19 353 1.99e-60 198
MS.gene031961.t1 AT1G49390 34.615 312 196 4 26 333 19 326 2.88e-60 197
MS.gene031961.t1 AT3G19010 34.211 342 202 9 30 356 8 341 3.09e-60 197
MS.gene031961.t1 AT3G19010 34.211 342 202 9 30 356 8 341 3.09e-60 197
MS.gene031961.t1 AT1G05010 35.127 316 188 7 49 357 3 308 6.28e-60 196
MS.gene031961.t1 AT1G55290 32.948 346 211 8 15 353 26 357 2.70e-59 196
MS.gene031961.t1 AT5G20550 33.441 311 198 4 24 329 17 323 7.22e-59 194
MS.gene031961.t1 AT5G20400 33.442 308 201 3 24 329 17 322 1.03e-58 194
MS.gene031961.t1 AT1G78550 32.364 275 184 1 82 356 5 277 1.61e-58 191
MS.gene031961.t1 AT2G44800 34.104 346 216 8 17 358 18 355 1.08e-57 191
MS.gene031961.t1 AT3G19000 36.000 350 198 10 26 356 4 346 3.97e-57 189
MS.gene031961.t1 AT5G54000 37.647 255 158 1 86 340 1 254 1.00e-56 186
MS.gene031961.t1 AT4G16330 40.239 251 139 5 109 355 13 256 2.00e-55 182
MS.gene031961.t1 AT1G77330 35.374 294 173 5 50 337 3 285 9.56e-55 182
MS.gene031961.t1 AT4G25420 34.969 326 196 7 25 342 39 356 1.19e-54 184
MS.gene031961.t1 AT1G06620 33.240 358 221 7 6 356 18 364 1.84e-54 183
MS.gene031961.t1 AT5G43440 32.479 351 218 9 15 356 24 364 3.12e-54 182
MS.gene031961.t1 AT2G19590 36.918 279 162 6 47 323 8 274 1.42e-52 176
MS.gene031961.t1 AT5G63600 31.379 290 188 4 48 337 31 309 2.79e-52 176
MS.gene031961.t1 AT5G63600 31.615 291 187 5 48 337 31 310 1.73e-51 174
MS.gene031961.t1 AT1G49390 36.290 248 157 1 86 333 1 247 2.18e-51 172
MS.gene031961.t1 AT1G06650 34.177 316 190 7 49 356 63 368 5.89e-51 174
MS.gene031961.t1 AT5G07200 32.110 327 206 6 26 342 37 357 1.35e-50 173
MS.gene031961.t1 AT3G12900 33.131 329 200 9 15 337 22 336 1.53e-50 172
MS.gene031961.t1 AT1G80340 36.137 321 181 11 25 337 26 330 2.15e-50 172
MS.gene031961.t1 AT5G63590 35.379 277 170 4 48 322 12 281 2.23e-50 171
MS.gene031961.t1 AT5G43450 34.132 334 194 11 15 337 24 342 5.73e-50 171
MS.gene031961.t1 AT3G19010 31.579 342 181 9 30 356 8 311 9.79e-50 169
MS.gene031961.t1 AT1G15550 34.688 320 189 7 26 337 30 337 1.65e-49 170
MS.gene031961.t1 AT5G59540 30.745 322 207 8 42 356 53 365 2.95e-49 169
MS.gene031961.t1 AT5G51810 31.594 345 217 7 5 342 22 354 5.20e-49 169
MS.gene031961.t1 AT4G25310 32.028 281 159 2 76 356 76 324 5.38e-49 167
MS.gene031961.t1 AT3G51240 39.662 237 135 5 103 336 6 237 1.97e-48 165
MS.gene031961.t1 AT5G07480 33.134 335 204 8 16 341 14 337 2.96e-48 167
MS.gene031961.t1 AT1G06640 33.544 316 192 7 49 356 63 368 1.62e-47 165
MS.gene031961.t1 AT5G59530 31.805 349 222 9 15 356 24 363 1.71e-47 165
MS.gene031961.t1 AT1G03410 32.945 343 208 10 6 337 11 342 9.65e-47 163
MS.gene031961.t1 AT1G03410 33.236 343 207 10 6 337 48 379 1.50e-46 163
MS.gene031961.t1 AT1G80330 33.333 312 171 9 44 337 41 333 7.04e-46 160
MS.gene031961.t1 AT1G04350 31.129 363 224 11 5 356 12 359 1.83e-45 159
MS.gene031961.t1 AT1G44090 33.231 325 203 8 25 342 42 359 3.23e-45 159
MS.gene031961.t1 AT2G30840 32.033 359 227 10 6 356 12 361 4.27e-45 158
MS.gene031961.t1 AT3G50210 34.932 292 165 10 49 317 7 296 4.66e-45 157
MS.gene031961.t1 AT3G50210 34.932 292 165 10 49 317 7 296 4.66e-45 157
MS.gene031961.t1 AT3G50210 34.932 292 165 10 49 317 7 296 4.66e-45 157
MS.gene031961.t1 AT2G19590 37.449 243 141 5 83 323 26 259 2.81e-44 154
MS.gene031961.t1 AT1G60980 29.969 327 210 6 24 340 34 351 1.38e-43 155
MS.gene031961.t1 AT3G19000 36.194 268 146 9 30 278 8 269 2.87e-43 151
MS.gene031961.t1 AT1G04380 31.098 328 195 8 41 356 36 344 3.04e-43 153
MS.gene031961.t1 AT5G12270 31.487 343 212 9 23 356 30 358 1.03e-42 152
MS.gene031961.t1 AT2G30830 30.233 344 223 8 13 350 19 351 1.69e-42 151
MS.gene031961.t1 AT1G30040 31.410 312 191 11 34 338 18 313 3.07e-42 150
MS.gene031961.t1 AT1G06645 32.915 319 187 9 49 356 76 378 3.17e-42 151
MS.gene031961.t1 AT2G30840 31.755 359 222 11 6 356 12 355 1.17e-41 149
MS.gene031961.t1 AT3G49620 33.219 292 163 10 50 317 34 317 1.89e-41 149
MS.gene031961.t1 AT5G43440 32.472 271 169 7 15 280 24 285 2.57e-41 146
MS.gene031961.t1 AT5G63580 35.968 253 142 6 28 278 6 240 2.63e-41 145
MS.gene031961.t1 AT3G19010 33.962 265 153 8 30 279 8 265 6.95e-41 145
MS.gene031961.t1 AT5G63580 35.857 251 141 6 28 276 6 238 8.24e-41 144
MS.gene031961.t1 AT5G43935 32.542 295 161 9 50 337 19 282 9.11e-41 145
MS.gene031961.t1 AT4G21200 33.993 303 172 11 42 338 34 314 1.16e-40 146
MS.gene031961.t1 AT3G49630 32.877 292 164 10 50 317 9 292 1.57e-40 145
MS.gene031961.t1 AT3G61400 30.460 348 222 9 2 337 12 351 1.87e-40 146
MS.gene031961.t1 AT3G49630 33.582 268 153 8 67 317 29 288 2.71e-40 145
MS.gene031961.t1 AT1G03400 31.268 339 209 9 6 337 11 332 3.30e-40 145
MS.gene031961.t1 AT4G25300 35.263 190 122 1 167 356 73 261 8.94e-40 142
MS.gene031961.t1 AT5G63595 29.699 266 160 4 49 314 24 262 1.02e-39 142
MS.gene031961.t1 AT2G34555 32.997 297 178 12 50 339 27 309 1.19e-39 143
MS.gene031961.t1 AT1G06620 32.847 274 175 5 6 278 18 283 2.61e-39 141
MS.gene031961.t1 AT2G25450 30.168 358 232 10 6 356 12 358 4.91e-39 142
MS.gene031961.t1 AT4G25420 34.351 262 156 7 25 278 39 292 6.63e-39 140
MS.gene031961.t1 AT1G78440 30.164 305 178 11 50 338 18 303 1.43e-38 140
MS.gene031961.t1 AT1G06650 35.652 230 140 4 49 277 63 285 1.71e-37 137
MS.gene031961.t1 AT5G51810 31.944 288 177 8 5 285 22 297 1.40e-36 134
MS.gene031961.t1 AT5G43450 32.963 270 160 9 15 277 24 279 4.19e-36 132
MS.gene031961.t1 AT4G21690 29.710 276 179 6 73 337 61 332 2.32e-35 132
MS.gene031961.t1 AT5G59540 30.417 240 156 6 42 278 53 284 7.82e-35 129
MS.gene031961.t1 AT1G03400 29.155 367 208 10 6 337 11 360 9.59e-35 131
MS.gene031961.t1 AT1G50960 27.707 314 211 6 25 338 18 315 1.62e-34 130
MS.gene031961.t1 AT1G06640 34.632 231 143 4 49 278 63 286 1.80e-34 129
MS.gene031961.t1 AT1G06640 34.802 227 140 4 49 274 63 282 5.15e-34 127
MS.gene031961.t1 AT2G30840 32.130 277 174 7 6 277 12 279 1.34e-32 124
MS.gene031961.t1 AT1G04380 31.452 248 144 6 41 280 36 265 1.14e-30 118
MS.gene031961.t1 AT3G61400 29.825 285 184 7 2 278 12 288 5.02e-30 117
MS.gene031961.t1 AT1G02400 28.197 305 201 9 42 338 16 310 1.39e-29 116
MS.gene031961.t1 AT1G30040 30.952 252 151 11 34 278 18 253 3.08e-29 114
MS.gene031961.t1 AT5G58660 29.592 294 170 8 47 315 31 312 1.92e-28 114
MS.gene031961.t1 AT1G47990 27.597 308 188 9 47 338 12 300 1.31e-27 110
MS.gene031961.t1 AT3G50210 36.145 166 100 3 157 317 50 214 2.77e-27 108
MS.gene031961.t1 AT3G46500 30.519 308 185 13 48 337 12 308 3.36e-27 110
MS.gene031961.t1 AT3G49630 35.673 171 97 4 153 317 56 219 8.71e-27 107
MS.gene031961.t1 AT3G47190 28.763 299 178 10 33 311 8 291 1.47e-26 108
MS.gene031961.t1 AT5G07480 35.079 191 111 4 159 341 43 228 1.59e-26 106
MS.gene031961.t1 AT4G23340 31.636 275 168 10 76 340 30 294 2.25e-26 107
MS.gene031961.t1 AT3G46490 29.808 312 187 10 50 337 12 315 5.55e-26 106
MS.gene031961.t1 AT1G35190 32.787 305 169 13 58 337 17 310 7.26e-24 100
MS.gene031961.t1 AT5G51310 30.350 257 152 8 68 306 17 264 2.78e-23 99.0
MS.gene031961.t1 AT1G35190 31.579 304 151 14 58 337 17 287 1.20e-22 97.1
MS.gene031961.t1 AT1G14130 30.000 300 184 11 50 343 9 288 1.32e-22 97.1
MS.gene031961.t1 AT3G46490 28.289 304 186 10 50 329 12 307 3.16e-22 95.9
MS.gene031961.t1 AT5G58660 28.125 256 148 7 47 278 31 274 5.84e-21 91.7
MS.gene031961.t1 AT1G14120 27.551 294 180 8 50 333 8 278 2.52e-20 90.5
MS.gene031961.t1 AT1G14120 27.551 294 180 8 50 333 8 278 2.52e-20 90.5
MS.gene031961.t1 AT1G14120 27.551 294 180 8 50 333 8 278 2.52e-20 90.5
MS.gene031961.t1 AT3G46500 29.749 279 167 13 48 308 12 279 2.67e-20 90.1
MS.gene031961.t1 AT4G03070 25.714 315 199 11 48 345 12 308 1.00e-18 86.3
MS.gene031961.t1 AT4G23340 34.659 176 106 6 172 340 3 176 6.57e-18 81.6
MS.gene031961.t1 AT1G52820 23.026 304 208 7 48 340 10 298 6.18e-17 80.9
MS.gene031961.t1 AT4G16765 28.251 223 147 6 126 337 15 235 8.38e-17 79.3
MS.gene031961.t1 AT4G16765 28.251 223 147 6 126 337 15 235 8.38e-17 79.3
MS.gene031961.t1 AT4G16765 28.251 223 147 6 126 337 15 235 8.38e-17 79.3
MS.gene031961.t1 AT1G02400 26.154 260 175 8 42 294 16 265 1.19e-16 79.3
MS.gene031961.t1 AT4G16765 28.837 215 140 6 126 329 15 227 7.09e-16 76.6
MS.gene031961.t1 AT4G22870 36.752 117 63 3 247 359 2 111 1.34e-15 72.8
MS.gene031961.t1 AT3G46500 32.203 177 106 6 170 337 1 172 1.51e-15 74.7
MS.gene031961.t1 AT1G28030 24.627 268 191 7 72 334 36 297 2.30e-15 76.6
MS.gene031961.t1 AT3G46500 31.667 180 109 6 167 337 60 234 2.75e-15 75.1
MS.gene031961.t1 AT3G46500 31.667 180 109 6 167 337 60 234 2.75e-15 75.1
MS.gene031961.t1 AT4G22870 32.836 134 73 5 236 359 26 152 7.14e-14 68.9
MS.gene031961.t1 AT1G80320 25.000 268 171 8 81 335 41 291 1.21e-13 71.2
MS.gene031961.t1 AT4G16765 35.897 117 68 3 226 337 75 189 1.54e-12 66.2
MS.gene031961.t1 AT4G16770 29.302 215 133 7 48 252 20 225 3.15e-12 66.6
MS.gene031961.t1 AT3G46480 29.555 247 136 11 103 332 38 263 4.12e-12 66.6

Find 94 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTAGAGTGCAGGTCTTTC+AGG 0.194260 3.4:+70328689 None:intergenic
AAGTTCGAAAATTTGATAAT+TGG 0.202865 3.4:-70331015 MS.gene031961:CDS
TCACTCCATGGTTTACAATT+TGG 0.211348 3.4:+70332405 None:intergenic
CAAGGATTGAACTCGGATTA+TGG 0.223395 3.4:+70332622 None:intergenic
AAAATTCTTCAAAATGCATT+TGG 0.274924 3.4:-70331178 MS.gene031961:CDS
ATAGACCTTGGAGGCTTAAA+TGG 0.294622 3.4:-70332497 MS.gene031961:CDS
AAATTCTTCAAAATGCATTT+GGG 0.295947 3.4:-70331177 MS.gene031961:CDS
TTCTGATGCTTGTCGTGATT+GGG 0.306620 3.4:-70332435 MS.gene031961:CDS
TCAATGGGTATATCACTTCT+TGG 0.323722 3.4:+70328734 None:intergenic
GATAAACCTAATGTCAATTC+TGG 0.341653 3.4:+70331100 None:intergenic
CTACAATTGGCCTATCAGTT+GGG 0.354768 3.4:+70332555 None:intergenic
AGGGAAGTGTTTGATGAGTA+TGG 0.357148 3.4:-70331268 MS.gene031961:CDS
AAAATTTGATAATTGGATTA+CGG 0.363529 3.4:-70331008 MS.gene031961:CDS
CCTAATGTCAATTCTGGCCT+TGG 0.364319 3.4:+70331106 None:intergenic
CCAAGGCCAGAATTGACATT+AGG 0.372676 3.4:-70331106 MS.gene031961:CDS
CTGCTTCTCCACAATCTTGC+AGG 0.373489 3.4:-70332175 MS.gene031961:intron
CTAGCTTTGTCCATCAAATC+AGG 0.387812 3.4:+70332380 None:intergenic
AAGCATCAGAAATTTGCTTA+AGG 0.388380 3.4:+70332447 None:intergenic
AGACCAGCCACTTGGTCATC+TGG 0.389581 3.4:+70331040 None:intergenic
CCATACCCTTCATAAGTTGT+TGG 0.390338 3.4:+70332296 None:intergenic
TTTCTGATGCTTGTCGTGAT+TGG 0.396497 3.4:-70332436 MS.gene031961:CDS
AGAAAGGTGCTATTCTTGAT+TGG 0.399483 3.4:-70332256 MS.gene031961:CDS
AAGGATTGAACTCGGATTAT+GGG 0.400684 3.4:+70332623 None:intergenic
TATTCATCAAAGGTCATTGC+TGG 0.404915 3.4:+70328668 None:intergenic
AACTCTCCAACAACTTATGA+AGG 0.430150 3.4:-70332302 MS.gene031961:CDS
AAGCCTCCAAGGTCTATGAT+TGG 0.432800 3.4:+70332503 None:intergenic
AGCCTCCAAGGTCTATGATT+GGG 0.437523 3.4:+70332504 None:intergenic
TCAATTCTTTCACTTGCCTA+TGG 0.440275 3.4:-70332345 MS.gene031961:CDS
CAATGGGTATATCACTTCTT+GGG 0.440900 3.4:+70328735 None:intergenic
TAAGAAGAAGTGTCTACAAT+TGG 0.441003 3.4:+70332542 None:intergenic
CTGATTTGATGGACAAAGCT+AGG 0.442913 3.4:-70332379 MS.gene031961:CDS
AATTCTGGCCTTGGACACTT+TGG 0.456503 3.4:+70331115 None:intergenic
ACGATGAAGGCATGTCTAGC+AGG 0.463675 3.4:+70330980 None:intergenic
GTCACCAATGTTGACGATGA+AGG 0.465406 3.4:+70330967 None:intergenic
CCAACAACTTATGAAGGGTA+TGG 0.471679 3.4:-70332296 MS.gene031961:CDS
CTGCAAGATTGTGGAGAAGC+AGG 0.473041 3.4:+70332176 None:intergenic
CAGTCAAGGATTGCAACAAA+TGG 0.474477 3.4:-70332199 MS.gene031961:CDS
TACAATTGGCCTATCAGTTG+GGG 0.476899 3.4:+70332556 None:intergenic
CTTCCAGATGACCAAGTGGC+TGG 0.481957 3.4:-70331043 MS.gene031961:CDS
TTAGAATGAGGGGTCCTTGT+GGG 0.487201 3.4:-70328634 MS.gene031961:CDS
TGGACAAAGCTAGGGAAACT+TGG 0.491949 3.4:-70332370 MS.gene031961:CDS
GTTGCAATCCTTGACTGAAA+GGG 0.496300 3.4:+70332205 None:intergenic
CTACCTTCCCCTTTCAGTCA+AGG 0.504919 3.4:-70332213 MS.gene031961:CDS
TCTACAATTGGCCTATCAGT+TGG 0.507828 3.4:+70332554 None:intergenic
CAACATTGGTGACCAAATAC+AGG 0.509324 3.4:-70330957 MS.gene031961:intron
TGAACTCGGATTATGGGCTC+TGG 0.514833 3.4:+70332629 None:intergenic
TGTTGCAATCCTTGACTGAA+AGG 0.515451 3.4:+70332204 None:intergenic
TGGAGTGAGTCCTGATTTGA+TGG 0.517282 3.4:-70332390 MS.gene031961:CDS
TTCTTCCAAATTGTAAACCA+TGG 0.519256 3.4:-70332410 MS.gene031961:CDS
TTATATTACCTGCAAGATTG+TGG 0.520836 3.4:+70332167 None:intergenic
AGCAACATAGTCATCCCTCC+TGG 0.521854 3.4:+70331064 None:intergenic
AAGGCTTTGTCATTAAACCT+TGG 0.523781 3.4:-70331211 MS.gene031961:CDS
GTCATTGCTGGGTAGAGTGC+AGG 0.527216 3.4:+70328680 None:intergenic
AATATCCCAATCATAGACCT+TGG 0.544241 3.4:-70332509 MS.gene031961:CDS
ACTAAGTGGGAGATTAATGA+AGG 0.553659 3.4:-70331230 MS.gene031961:CDS
CAGACTCTTCATTAGAATGA+GGG 0.557090 3.4:-70328645 MS.gene031961:CDS
GAAGAGTCTGTATTCATCAA+AGG 0.559945 3.4:+70328658 None:intergenic
AATTCTTCAAAATGCATTTG+GGG 0.560998 3.4:-70331176 MS.gene031961:CDS
ATTCTTTCACTTGCCTATGG+AGG 0.563966 3.4:-70332342 MS.gene031961:CDS
ACAGACTCTTCATTAGAATG+AGG 0.564041 3.4:-70328646 MS.gene031961:CDS
GAAGGGTATGGAAGTAGACT+TGG 0.565024 3.4:-70332284 MS.gene031961:CDS
TTATCATCACACTCTGACCC+AGG 0.568157 3.4:-70331082 MS.gene031961:CDS
ATCTATGCAGCCTTCAGACA+AGG 0.568552 3.4:+70332604 None:intergenic
CTTCAGACAAGGATTGAACT+CGG 0.573915 3.4:+70332615 None:intergenic
CGAGTTCAATCCTTGTCTGA+AGG 0.574199 3.4:-70332614 MS.gene031961:CDS
TTGCAATCCTTGACTGAAAG+GGG 0.574357 3.4:+70332206 None:intergenic
ATCCCAATCATAGACCTTGG+AGG 0.574789 3.4:-70332506 MS.gene031961:CDS
AGAGAACTAGTGAAACTAAG+TGG 0.579879 3.4:-70331244 MS.gene031961:CDS
CATGCCTTCATCGTCAACAT+TGG 0.583354 3.4:-70330971 MS.gene031961:CDS
GGGGCTTGATATATCTATCA+GGG 0.583922 3.4:+70332576 None:intergenic
AGTAGACTTGGTGTTGAGAA+AGG 0.585006 3.4:-70332272 MS.gene031961:CDS
TATTGTTGCTTAGCCTCCAT+AGG 0.585040 3.4:+70332329 None:intergenic
GAACTTGTAGACCAGCCACT+TGG 0.591710 3.4:+70331032 None:intergenic
CATCACCATTTAAGCCTCCA+AGG 0.592909 3.4:+70332492 None:intergenic
TGATTTGATGGACAAAGCTA+GGG 0.594330 3.4:-70332378 MS.gene031961:CDS
TCTGATGCTTGTCGTGATTG+GGG 0.594985 3.4:-70332434 MS.gene031961:CDS
TCAAATCAGGACTCACTCCA+TGG 0.597148 3.4:+70332393 None:intergenic
CGATGAAGGCATGTCTAGCA+GGG 0.598763 3.4:+70330981 None:intergenic
GCAACATAGTCATCCCTCCT+GGG 0.600312 3.4:+70331065 None:intergenic
ACAATTGGCCTATCAGTTGG+GGG 0.608028 3.4:+70332557 None:intergenic
GGGAAGTGTTTGATGAGTAT+GGG 0.610249 3.4:-70331267 MS.gene031961:CDS
ATTCTTCAAAATGCATTTGG+GGG 0.612126 3.4:-70331175 MS.gene031961:CDS
GAGAACTAGTGAAACTAAGT+GGG 0.614645 3.4:-70331243 MS.gene031961:CDS
ATTCATCAAAGGTCATTGCT+GGG 0.622333 3.4:+70328669 None:intergenic
ACTCTCCAACAACTTATGAA+GGG 0.630030 3.4:-70332301 MS.gene031961:CDS
AATCCTTGACTGAAAGGGGA+AGG 0.636702 3.4:+70332210 None:intergenic
ATTAGAATGAGGGGTCCTTG+TGG 0.638008 3.4:-70328635 MS.gene031961:CDS
AGACTCTTCATTAGAATGAG+GGG 0.641627 3.4:-70328644 MS.gene031961:CDS
CAATGCAACATACAAGAGTG+TGG 0.643955 3.4:-70328816 MS.gene031961:CDS
TCAACTTGAGATTTCCCACA+AGG 0.650765 3.4:+70328620 None:intergenic
CATCACACTCTGACCCAGGA+GGG 0.655445 3.4:-70331078 MS.gene031961:CDS
GGATTGAAGCATGAACATCA+AGG 0.660791 3.4:+70332468 None:intergenic
GTTGCTTCCAGATGACCAAG+TGG 0.693060 3.4:-70331047 MS.gene031961:CDS
TCATCACACTCTGACCCAGG+AGG 0.695158 3.4:-70331079 MS.gene031961:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACTTATAAGTA+AGG + chr3.4:70329677-70329696 None:intergenic 10.0%
!! AAAATAAAAACTTATAAGTA+AGG + chr3.4:70329644-70329663 None:intergenic 10.0%
!! AAATAACTATTTATAAAAAG+TGG + chr3.4:70330894-70330913 None:intergenic 10.0%
!! TAAAAAAAATTCTATACTAT+TGG - chr3.4:70331289-70331308 MS.gene031961:intron 10.0%
!! TAAAATAGAACATAATATAA+AGG + chr3.4:70330758-70330777 None:intergenic 10.0%
!! TCGATAATAAAAAAAAATAA+AGG + chr3.4:70330714-70330733 None:intergenic 10.0%
!!! AAGATTTTAAAATTTGAATA+GGG - chr3.4:70329556-70329575 MS.gene031961:intron 10.0%
!!! ATTTTTCATAAAATAATATG+AGG + chr3.4:70331082-70331101 None:intergenic 10.0%
!!! CCAATTTAAAATAAATATTT+AGG + chr3.4:70330662-70330681 None:intergenic 10.0%
!!! CCTAAATATTTATTTTAAAT+TGG - chr3.4:70330659-70330678 MS.gene031961:intron 10.0%
!!! TATAAGTTTTTTTTTTTTGA+GGG - chr3.4:70329681-70329700 MS.gene031961:intron 10.0%
!!! TTATAAGTTTTTTTTTTTTG+AGG - chr3.4:70329680-70329699 MS.gene031961:intron 10.0%
!! AAGGTTAGATAATTTAAATT+TGG - chr3.4:70330547-70330566 MS.gene031961:intron 15.0%
!! AATTAATTACTAGTTAAGAT+TGG - chr3.4:70331608-70331627 MS.gene031961:intron 15.0%
!! AGGTTAGATAATTTAAATTT+GGG - chr3.4:70330548-70330567 MS.gene031961:intron 15.0%
!! CAAATTTAATTAAAATAACG+AGG + chr3.4:70332229-70332248 None:intergenic 15.0%
!! TAAATGTTTATCTATTTATG+TGG + chr3.4:70331332-70331351 None:intergenic 15.0%
!! TAACCTATAATTAATCAAAT+TGG + chr3.4:70329954-70329973 None:intergenic 15.0%
!! TAATTATATGTTGAAAGAAT+TGG + chr3.4:70329865-70329884 None:intergenic 15.0%
!! TATAAGTTGCATTAATTAAT+TGG - chr3.4:70332378-70332397 MS.gene031961:CDS 15.0%
!!! AAAATTTGATAATTGGATTA+CGG - chr3.4:70330243-70330262 MS.gene031961:intron 15.0%
!!! ATCTAAAAATCAACAATTTT+TGG + chr3.4:70331242-70331261 None:intergenic 15.0%
!!! CAAGATTTTAAAATTTGAAT+AGG - chr3.4:70329555-70329574 MS.gene031961:intron 15.0%
!!! TTTAAATTTGGGATAAAATT+AGG - chr3.4:70330559-70330578 MS.gene031961:intron 15.0%
!!! TTTGAATTTTATAATTCGAA+CGG + chr3.4:70329489-70329508 None:intergenic 15.0%
!! AAAATTCTTCAAAATGCATT+TGG - chr3.4:70330073-70330092 MS.gene031961:intron 20.0%
!! AAATTCTTCAAAATGCATTT+GGG - chr3.4:70330074-70330093 MS.gene031961:intron 20.0%
!! AATATGCATATGTATTAAAC+TGG + chr3.4:70332060-70332079 None:intergenic 20.0%
!! ATTATCCTAACTATAATATG+TGG - chr3.4:70330358-70330377 MS.gene031961:intron 20.0%
!! CATATATAGTTTATATGCTT+GGG - chr3.4:70331007-70331026 MS.gene031961:CDS 20.0%
!! GATCCAATTTGATTAATTAT+AGG - chr3.4:70329948-70329967 MS.gene031961:intron 20.0%
!! TAATGCAACTTATAGTTATA+TGG + chr3.4:70332372-70332391 None:intergenic 20.0%
!! TATTGAATGAATCTAAAAGA+TGG + chr3.4:70331755-70331774 None:intergenic 20.0%
!! TCATAAAATAATATGAGGAT+AGG + chr3.4:70331077-70331096 None:intergenic 20.0%
!! TGGTTTATAACTTATAAGTA+AGG + chr3.4:70329710-70329729 None:intergenic 20.0%
!! TTTATTCTTCAAACAACAAA+TGG - chr3.4:70330469-70330488 MS.gene031961:intron 20.0%
!!! AAGTCATAGGTTTTTTTTAT+TGG - chr3.4:70331369-70331388 MS.gene031961:intron 20.0%
!!! AAGTTCGAAAATTTGATAAT+TGG - chr3.4:70330236-70330255 MS.gene031961:intron 20.0%
!!! AGTGTGGTTTTTTTATAAAA+CGG - chr3.4:70329274-70329293 MS.gene031961:intron 20.0%
!!! ATGATATATTGACAACATTT+TGG - chr3.4:70331100-70331119 MS.gene031961:CDS 20.0%
!!! TCTTAAATTTTACCTGTATT+TGG + chr3.4:70330309-70330328 None:intergenic 20.0%
!!! TTCTGATAAATCTATGATTT+TGG + chr3.4:70331489-70331508 None:intergenic 20.0%
!!! TTTTTGCTTATATTTATGAC+CGG - chr3.4:70331840-70331859 MS.gene031961:intron 20.0%
! AATTCTTCAAAATGCATTTG+GGG - chr3.4:70330075-70330094 MS.gene031961:intron 25.0%
! AGTATCTCTCTTAAAACTAT+TGG - chr3.4:70329606-70329625 MS.gene031961:intron 25.0%
! ATAGTATAGATATACGATGT+TGG + chr3.4:70331130-70331149 None:intergenic 25.0%
! ATGCAAAATACTCCTATAAT+TGG + chr3.4:70329364-70329383 None:intergenic 25.0%
! ATTATAGGTTAAATATGTGC+AGG - chr3.4:70329963-70329982 MS.gene031961:intron 25.0%
! CCAAGCATATAAACTATATA+TGG + chr3.4:70331009-70331028 None:intergenic 25.0%
! CCATATATAGTTTATATGCT+TGG - chr3.4:70331006-70331025 MS.gene031961:CDS 25.0%
! CCTGAGAAAATCATAAATAA+TGG + chr3.4:70330609-70330628 None:intergenic 25.0%
! GATAAAATGTGAGACAAAAA+TGG + chr3.4:70329730-70329749 None:intergenic 25.0%
! GCAAACTAGCATATATAAAA+AGG + chr3.4:70330963-70330982 None:intergenic 25.0%
! TAATACATAGACTAAAACGA+GGG + chr3.4:70331702-70331721 None:intergenic 25.0%
! TGCAAAATACTCCTATAATT+GGG + chr3.4:70329363-70329382 None:intergenic 25.0%
! TTATAGGTTAAATATGTGCA+GGG - chr3.4:70329964-70329983 MS.gene031961:intron 25.0%
!! CCATTATTTATGATTTTCTC+AGG - chr3.4:70330606-70330625 MS.gene031961:intron 25.0%
!! GTATAGAAGTTTGATGTTTT+TGG - chr3.4:70331516-70331535 MS.gene031961:intron 25.0%
!!! AAAAATGATGTTTTTGCCTT+CGG + chr3.4:70329173-70329192 None:intergenic 25.0%
!!! ATAGGAGTATTTTGCATATT+GGG - chr3.4:70329367-70329386 MS.gene031961:intron 25.0%
!!! GAATTTTTTCTTCTAATCCA+AGG + chr3.4:70330060-70330079 None:intergenic 25.0%
!!! TATAGGAGTATTTTGCATAT+TGG - chr3.4:70329366-70329385 MS.gene031961:intron 25.0%
AAACAGTACACTCAAGATAT+TGG + chr3.4:70330932-70330951 None:intergenic 30.0%
AAAGTCATATACTCTCAAAG+AGG + chr3.4:70332336-70332355 None:intergenic 30.0%
AAGTCATATACTCTCAAAGA+GGG + chr3.4:70332335-70332354 None:intergenic 30.0%
AAGTTTGTAAGAACTAAGAG+AGG + chr3.4:70329128-70329147 None:intergenic 30.0%
ACTACACATCTATACTTTGT+TGG - chr3.4:70329333-70329352 MS.gene031961:intron 30.0%
ACTAGCCACATATTATAGTT+AGG + chr3.4:70330366-70330385 None:intergenic 30.0%
AGTCTATGTATTACACCATT+CGG - chr3.4:70331709-70331728 MS.gene031961:intron 30.0%
ATTCTTCAAAATGCATTTGG+GGG - chr3.4:70330076-70330095 MS.gene031961:intron 30.0%
CGTCATATCAATGGTTATAA+TGG - chr3.4:70331194-70331213 MS.gene031961:CDS 30.0%
CTACACATCTATACTTTGTT+GGG - chr3.4:70329334-70329353 MS.gene031961:intron 30.0%
CTTTCATATCGTCATATCAA+TGG - chr3.4:70331185-70331204 MS.gene031961:CDS 30.0%
GATAAACCTAATGTCAATTC+TGG + chr3.4:70330154-70330173 None:intergenic 30.0%
GTAATACATAGACTAAAACG+AGG + chr3.4:70331703-70331722 None:intergenic 30.0%
TCAAGTCTTTGTAAATGAAG+TGG + chr3.4:70329760-70329779 None:intergenic 30.0%
TGCATATGTATTAAACTGGA+TGG + chr3.4:70332056-70332075 None:intergenic 30.0%
TTATATTACCTGCAAGATTG+TGG + chr3.4:70329087-70329106 None:intergenic 30.0%
TTCTTCCAAATTGTAAACCA+TGG - chr3.4:70328841-70328860 MS.gene031961:intron 30.0%
TTTGTTTGTGTCAATTGAAC+AGG - chr3.4:70332405-70332424 MS.gene031961:CDS 30.0%
! AAGCATCAGAAATTTGCTTA+AGG + chr3.4:70328807-70328826 None:intergenic 30.0%
! GTTCAAAGGGTATAAATCTA+GGG - chr3.4:70329417-70329436 MS.gene031961:intron 30.0%
! TATTGAATTGATCATCGACT+CGG + chr3.4:70332187-70332206 None:intergenic 30.0%
! TGTTCAAAGGGTATAAATCT+AGG - chr3.4:70329416-70329435 MS.gene031961:intron 30.0%
!! AAAATGATGTTTTTGCCTTC+GGG + chr3.4:70329172-70329191 None:intergenic 30.0%
!! ATCATCTCTAGCTGATTTTA+TGG + chr3.4:70329931-70329950 None:intergenic 30.0%
!! ATTTTTATCCAAAGTGTCCA+AGG - chr3.4:70330128-70330147 MS.gene031961:intron 30.0%
!! TAAGAAGAAGTGTCTACAAT+TGG + chr3.4:70328712-70328731 None:intergenic 30.0%
!! TGAGAGTATATGACTTTTTG+AGG - chr3.4:70332339-70332358 MS.gene031961:CDS 30.0%
!!! GAAGTTTGATGTTTTTGGTT+CGG - chr3.4:70331521-70331540 MS.gene031961:intron 30.0%
AACTCTCCAACAACTTATGA+AGG - chr3.4:70328949-70328968 MS.gene031961:intron 35.0%
AAGGATTGAACTCGGATTAT+GGG + chr3.4:70328631-70328650 None:intergenic 35.0%
AATATCCCAATCATAGACCT+TGG - chr3.4:70328742-70328761 MS.gene031961:CDS 35.0%
ACAGACTCTTCATTAGAATG+AGG - chr3.4:70332605-70332624 MS.gene031961:CDS 35.0%
ACTAAGTGGGAGATTAATGA+AGG - chr3.4:70330021-70330040 MS.gene031961:intron 35.0%
ACTCTCCAACAACTTATGAA+GGG - chr3.4:70328950-70328969 MS.gene031961:intron 35.0%
AGACTCTTCATTAGAATGAG+GGG - chr3.4:70332607-70332626 MS.gene031961:CDS 35.0%
AGAGAACTAGTGAAACTAAG+TGG - chr3.4:70330007-70330026 MS.gene031961:intron 35.0%
ATAAAAAAACCACACTCCTC+TGG + chr3.4:70329270-70329289 None:intergenic 35.0%
ATATACTCTCAAAGAGGGAA+AGG + chr3.4:70332330-70332349 None:intergenic 35.0%
CAAAGAGGGAAAGGAAAAAT+GGG + chr3.4:70332321-70332340 None:intergenic 35.0%
CAATGGGTATATCACTTCTT+GGG + chr3.4:70332519-70332538 None:intergenic 35.0%
CAGACTCTTCATTAGAATGA+GGG - chr3.4:70332606-70332625 MS.gene031961:CDS 35.0%
CCAAAGGTTCTTTGTTCAAA+GGG - chr3.4:70329404-70329423 MS.gene031961:intron 35.0%
CTTTACGTACGATGTTGAAA+AGG - chr3.4:70330528-70330547 MS.gene031961:intron 35.0%
GAGAACTAGTGAAACTAAGT+GGG - chr3.4:70330008-70330027 MS.gene031961:intron 35.0%
GAGTTATCACTTGAAGTCAT+AGG - chr3.4:70331356-70331375 MS.gene031961:intron 35.0%
GTCGAACTGCATAAGTAAAT+TGG + chr3.4:70332125-70332144 None:intergenic 35.0%
TCAAAGAGGGAAAGGAAAAA+TGG + chr3.4:70332322-70332341 None:intergenic 35.0%
TCAATGGGTATATCACTTCT+TGG + chr3.4:70332520-70332539 None:intergenic 35.0%
TCAATTCTTTCACTTGCCTA+TGG - chr3.4:70328906-70328925 MS.gene031961:intron 35.0%
TCACTCCATGGTTTACAATT+TGG + chr3.4:70328849-70328868 None:intergenic 35.0%
TCCAAAGGTTCTTTGTTCAA+AGG - chr3.4:70329403-70329422 MS.gene031961:intron 35.0%
TGCTTATATTTATGACCGGA+GGG - chr3.4:70331844-70331863 MS.gene031961:intron 35.0%
TGCTTATATTTGTGACCGAA+TGG + chr3.4:70331727-70331746 None:intergenic 35.0%
TGTTGAAGAGCCAAAAAGAT+TGG - chr3.4:70328599-70328618 MS.gene031961:CDS 35.0%
TTCACTCTCAAGTCTCAATA+GGG + chr3.4:70331668-70331687 None:intergenic 35.0%
TTCCTTAACTATTGCCTTGA+GGG + chr3.4:70330807-70330826 None:intergenic 35.0%
TTGCTTATATTTATGACCGG+AGG - chr3.4:70331843-70331862 MS.gene031961:intron 35.0%
TTGTAAATGAAGTGGCACAT+CGG + chr3.4:70329752-70329771 None:intergenic 35.0%
TTGTAAGAACTAAGAGAGGT+GGG + chr3.4:70329124-70329143 None:intergenic 35.0%
TTGTTGGACAAACAACATGT+AGG + chr3.4:70329790-70329809 None:intergenic 35.0%
TTTCACTCTCAAGTCTCAAT+AGG + chr3.4:70331669-70331688 None:intergenic 35.0%
TTTCCTTAACTATTGCCTTG+AGG + chr3.4:70330808-70330827 None:intergenic 35.0%
TTTGTAAGAACTAAGAGAGG+TGG + chr3.4:70329125-70329144 None:intergenic 35.0%
! AAGGCTTTGTCATTAAACCT+TGG - chr3.4:70330040-70330059 MS.gene031961:intron 35.0%
! CTAGTTAAGATTGGTCATCT+CGG - chr3.4:70331617-70331636 MS.gene031961:intron 35.0%
! GGCTTTAATAGTTTGTCCAA+AGG - chr3.4:70329388-70329407 MS.gene031961:intron 35.0%
! TAGTTAAGATTGGTCATCTC+GGG - chr3.4:70331618-70331637 MS.gene031961:intron 35.0%
! TGATTTGATGGACAAAGCTA+GGG - chr3.4:70328873-70328892 MS.gene031961:intron 35.0%
!! AGAAAGGTGCTATTCTTGAT+TGG - chr3.4:70328995-70329014 MS.gene031961:intron 35.0%
!!! AAGCTGTTTTAATGGCTCAA+TGG + chr3.4:70332536-70332555 None:intergenic 35.0%
!!! AGCTGTTTTAATGGCTCAAT+GGG + chr3.4:70332535-70332554 None:intergenic 35.0%
!!! GATGTTTTAACGTGTTTGAG+AGG + chr3.4:70329534-70329553 None:intergenic 35.0%
ATAGACCTTGGAGGCTTAAA+TGG - chr3.4:70328754-70328773 MS.gene031961:CDS 40.0%
ATTCTTTCACTTGCCTATGG+AGG - chr3.4:70328909-70328928 MS.gene031961:intron 40.0%
CAAGGATTGAACTCGGATTA+TGG + chr3.4:70328632-70328651 None:intergenic 40.0%
CAATGCAACATACAAGAGTG+TGG - chr3.4:70332435-70332454 MS.gene031961:CDS 40.0%
CACATCTATACTTTGTTGGG+AGG - chr3.4:70329337-70329356 MS.gene031961:intron 40.0%
CAGTCAAGGATTGCAACAAA+TGG - chr3.4:70329052-70329071 MS.gene031961:intron 40.0%
CCAACAACTTATGAAGGGTA+TGG - chr3.4:70328955-70328974 MS.gene031961:intron 40.0%
CCATACCCTTCATAAGTTGT+TGG + chr3.4:70328958-70328977 None:intergenic 40.0%
CCCTTTGAACAAAGAACCTT+TGG + chr3.4:70329407-70329426 None:intergenic 40.0%
CTTCAGACAAGGATTGAACT+CGG + chr3.4:70328639-70328658 None:intergenic 40.0%
GAAAAATGGGATGGAAAACG+AGG + chr3.4:70332308-70332327 None:intergenic 40.0%
GGATTGAAGCATGAACATCA+AGG + chr3.4:70328786-70328805 None:intergenic 40.0%
GGGGCTTGATATATCTATCA+GGG + chr3.4:70328678-70328697 None:intergenic 40.0%
GTGCAAACGCATGAGAAAAA+TGG - chr3.4:70329214-70329233 MS.gene031961:intron 40.0%
GTTGCAATCCTTGACTGAAA+GGG + chr3.4:70329049-70329068 None:intergenic 40.0%
GTTTGTCCAATAGAGAGAGT+TGG + chr3.4:70329823-70329842 None:intergenic 40.0%
TCAACTTGAGATTTCCCACA+AGG + chr3.4:70332634-70332653 None:intergenic 40.0%
TCTTACAAACTTCATCCCTC+CGG - chr3.4:70329136-70329155 MS.gene031961:intron 40.0%
TGTTGCAATCCTTGACTGAA+AGG + chr3.4:70329050-70329069 None:intergenic 40.0%
TTCTGATGCTTGTCGTGATT+GGG - chr3.4:70328816-70328835 MS.gene031961:CDS 40.0%
TTGCAATCCTTGACTGAAAG+GGG + chr3.4:70329048-70329067 None:intergenic 40.0%
TTTCTGATGCTTGTCGTGAT+TGG - chr3.4:70328815-70328834 MS.gene031961:CDS 40.0%
! CAACATTGGTGACCAAATAC+AGG - chr3.4:70330294-70330313 MS.gene031961:intron 40.0%
! CTACAATTGGCCTATCAGTT+GGG + chr3.4:70328699-70328718 None:intergenic 40.0%
! CTGATTTGATGGACAAAGCT+AGG - chr3.4:70328872-70328891 MS.gene031961:intron 40.0%
! TACAATTGGCCTATCAGTTG+GGG + chr3.4:70328698-70328717 None:intergenic 40.0%
! TATTGTTGCTTAGCCTCCAT+AGG + chr3.4:70328925-70328944 None:intergenic 40.0%
! TCTACAATTGGCCTATCAGT+TGG + chr3.4:70328700-70328719 None:intergenic 40.0%
!! AATTGATCATCGACTCGGTA+AGG + chr3.4:70332182-70332201 None:intergenic 40.0%
!! AGGGAAGTGTTTGATGAGTA+TGG - chr3.4:70329983-70330002 MS.gene031961:intron 40.0%
!! AGTAGACTTGGTGTTGAGAA+AGG - chr3.4:70328979-70328998 MS.gene031961:intron 40.0%
!! AGTTGGCGTTGGATTTTTGT+TGG + chr3.4:70329806-70329825 None:intergenic 40.0%
!! CTAGCTTTGTCCATCAAATC+AGG + chr3.4:70328874-70328893 None:intergenic 40.0%
!! GGGAAGTGTTTGATGAGTAT+GGG - chr3.4:70329984-70330003 MS.gene031961:intron 40.0%
!! GGTGTGACAAGCTGTTTTAA+TGG + chr3.4:70332544-70332563 None:intergenic 40.0%
!!! AAATGGTGTTTTTTCTCCGC+TGG - chr3.4:70329231-70329250 MS.gene031961:intron 40.0%
!!! TTGATGTTTTTGGTTCGGAC+TGG - chr3.4:70331526-70331545 MS.gene031961:intron 40.0%
AAGCCTCCAAGGTCTATGAT+TGG + chr3.4:70328751-70328770 None:intergenic 45.0%
AATCCTTGACTGAAAGGGGA+AGG + chr3.4:70329044-70329063 None:intergenic 45.0%
AGCCTCCAAGGTCTATGATT+GGG + chr3.4:70328750-70328769 None:intergenic 45.0%
ATATCAAGCCCCCAACTGAT+AGG - chr3.4:70328686-70328705 MS.gene031961:CDS 45.0%
ATCCCAATCATAGACCTTGG+AGG - chr3.4:70328745-70328764 MS.gene031961:CDS 45.0%
ATCTATGCAGCCTTCAGACA+AGG + chr3.4:70328650-70328669 None:intergenic 45.0%
ATTAGAATGAGGGGTCCTTG+TGG - chr3.4:70332616-70332635 MS.gene031961:CDS 45.0%
CAGTTCGACAAGTGACTTAG+TGG - chr3.4:70332136-70332155 MS.gene031961:intron 45.0%
CATCACCATTTAAGCCTCCA+AGG + chr3.4:70328762-70328781 None:intergenic 45.0%
CATGCCTTCATCGTCAACAT+TGG - chr3.4:70330280-70330299 MS.gene031961:intron 45.0%
CCAAGGCCAGAATTGACATT+AGG - chr3.4:70330145-70330164 MS.gene031961:intron 45.0%
CCTAATGTCAATTCTGGCCT+TGG + chr3.4:70330148-70330167 None:intergenic 45.0%
CGAGTTCAATCCTTGTCTGA+AGG - chr3.4:70328637-70328656 MS.gene031961:CDS 45.0%
GAGGGAAAGGAAAAATGGGA+TGG + chr3.4:70332317-70332336 None:intergenic 45.0%
GGGGGCTTGATATATCTATC+AGG + chr3.4:70328679-70328698 None:intergenic 45.0%
GTCACCAATGTTGACGATGA+AGG + chr3.4:70330287-70330306 None:intergenic 45.0%
TCAAATCAGGACTCACTCCA+TGG + chr3.4:70328861-70328880 None:intergenic 45.0%
TCGCTACTATATACACCCTC+CGG + chr3.4:70331862-70331881 None:intergenic 45.0%
TCTGATGCTTGTCGTGATTG+GGG - chr3.4:70328817-70328836 MS.gene031961:CDS 45.0%
TGCCCTCAAGGCAATAGTTA+AGG - chr3.4:70330802-70330821 MS.gene031961:intron 45.0%
TGGACAAAGCTAGGGAAACT+TGG - chr3.4:70328881-70328900 MS.gene031961:intron 45.0%
TGGATTGACAGTCAATCCAG+AGG - chr3.4:70329251-70329270 MS.gene031961:intron 45.0%
TGGATTGACTGTCAATCCAG+CGG + chr3.4:70329250-70329269 None:intergenic 45.0%
TTAGAATGAGGGGTCCTTGT+GGG - chr3.4:70332617-70332636 MS.gene031961:CDS 45.0%
TTATCATCACACTCTGACCC+AGG - chr3.4:70330169-70330188 MS.gene031961:intron 45.0%
TTGTTGGGAGGCCCAATTAT+AGG - chr3.4:70329349-70329368 MS.gene031961:intron 45.0%
! ACAATTGGCCTATCAGTTGG+GGG + chr3.4:70328697-70328716 None:intergenic 45.0%
! GAAGGGTATGGAAGTAGACT+TGG - chr3.4:70328967-70328986 MS.gene031961:intron 45.0%
! TAAGATTGGTCATCTCGGGA+AGG - chr3.4:70331622-70331641 MS.gene031961:intron 45.0%
! TGGAGTGAGTCCTGATTTGA+TGG - chr3.4:70328861-70328880 MS.gene031961:intron 45.0%
!! AATTCTGGCCTTGGACACTT+TGG + chr3.4:70330139-70330158 None:intergenic 45.0%
!! ATCGACTCGGTAAGGTAATG+AGG + chr3.4:70332174-70332193 None:intergenic 45.0%
!!! CAATTTAAAATAAATATTTA+GGG + chr3.4:70330661-70330680 None:intergenic 5.0%
!!! TTATAAATAGTTATTTATTT+TGG - chr3.4:70330898-70330917 MS.gene031961:intron 5.0%
AATACACGAATCTGCCCACG+TGG - chr3.4:70330400-70330419 MS.gene031961:intron 50.0%
ACAGTCAATCCAGAGGAGTG+TGG - chr3.4:70329258-70329277 MS.gene031961:intron 50.0%
AGCAACATAGTCATCCCTCC+TGG + chr3.4:70330190-70330209 None:intergenic 50.0%
CCAACGCCAACTCTCTCTAT+TGG - chr3.4:70329814-70329833 MS.gene031961:intron 50.0%
CCAATAGAGAGAGTTGGCGT+TGG + chr3.4:70329817-70329836 None:intergenic 50.0%
CGGTAAGGTAATGAGGTCAC+TGG + chr3.4:70332167-70332186 None:intergenic 50.0%
CTACCTTCCCCTTTCAGTCA+AGG - chr3.4:70329038-70329057 MS.gene031961:intron 50.0%
CTGCAAGATTGTGGAGAAGC+AGG + chr3.4:70329078-70329097 None:intergenic 50.0%
CTGCTTCTCCACAATCTTGC+AGG - chr3.4:70329076-70329095 MS.gene031961:intron 50.0%
CTTGTTAACCAGTGCCCTCA+AGG - chr3.4:70330790-70330809 MS.gene031961:intron 50.0%
GAACTTGTAGACCAGCCACT+TGG + chr3.4:70330222-70330241 None:intergenic 50.0%
GAGAGACACATGGGAACTTG+GGG - chr3.4:70330422-70330441 MS.gene031961:intron 50.0%
GCAACATAGTCATCCCTCCT+GGG + chr3.4:70330189-70330208 None:intergenic 50.0%
GCATTTGGGGGTGAAGAGAT+AGG - chr3.4:70330088-70330107 MS.gene031961:intron 50.0%
GCCTTCGGGATTGACAAATC+CGG + chr3.4:70329158-70329177 None:intergenic 50.0%
GGAGAGACACATGGGAACTT+GGG - chr3.4:70330421-70330440 MS.gene031961:intron 50.0%
GTTGCTTCCAGATGACCAAG+TGG - chr3.4:70330204-70330223 MS.gene031961:intron 50.0%
TCCGGATTTGTCAATCCCGA+AGG - chr3.4:70329154-70329173 MS.gene031961:intron 50.0%
TCGGGATTGACAAATCCGGA+GGG + chr3.4:70329154-70329173 None:intergenic 50.0%
TGAACTCGGATTATGGGCTC+TGG + chr3.4:70328625-70328644 None:intergenic 50.0%
TGGAGAGACACATGGGAACT+TGG - chr3.4:70330420-70330439 MS.gene031961:intron 50.0%
TTCGGGATTGACAAATCCGG+AGG + chr3.4:70329155-70329174 None:intergenic 50.0%
! AACTATTGCCTTGAGGGCAC+TGG + chr3.4:70330801-70330820 None:intergenic 50.0%
! ACGATGAAGGCATGTCTAGC+AGG + chr3.4:70330274-70330293 None:intergenic 50.0%
! CGATGAAGGCATGTCTAGCA+GGG + chr3.4:70330273-70330292 None:intergenic 50.0%
!! TGGGCTCTGGCCAATCTTTT+TGG + chr3.4:70328612-70328631 None:intergenic 50.0%
AGACCAGCCACTTGGTCATC+TGG + chr3.4:70330214-70330233 None:intergenic 55.0%
CATCACACTCTGACCCAGGA+GGG - chr3.4:70330173-70330192 MS.gene031961:intron 55.0%
CTTCCAGATGACCAAGTGGC+TGG - chr3.4:70330208-70330227 MS.gene031961:intron 55.0%
GGGTAGAGTGCAGGTCTTTC+AGG + chr3.4:70332565-70332584 None:intergenic 55.0%
GTCATTGCTGGGTAGAGTGC+AGG + chr3.4:70332574-70332593 None:intergenic 55.0%
TCATCACACTCTGACCCAGG+AGG - chr3.4:70330172-70330191 MS.gene031961:intron 55.0%
TCCCATGTGTCTCTCCACGT+GGG + chr3.4:70330417-70330436 None:intergenic 55.0%
TTCCCATGTGTCTCTCCACG+TGG + chr3.4:70330418-70330437 None:intergenic 55.0%
GCCCACGTGGAGAGACACAT+GGG - chr3.4:70330413-70330432 MS.gene031961:intron 60.0%
TGCCCACGTGGAGAGACACA+TGG - chr3.4:70330412-70330431 MS.gene031961:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 70328598 70332675 70328598 ID=MS.gene031961
chr3.4 mRNA 70328598 70332675 70328598 ID=MS.gene031961.t1;Parent=MS.gene031961
chr3.4 exon 70332176 70332675 70332176 ID=MS.gene031961.t1.exon1;Parent=MS.gene031961.t1
chr3.4 CDS 70332176 70332675 70332176 ID=cds.MS.gene031961.t1;Parent=MS.gene031961.t1
chr3.4 exon 70330958 70331288 70330958 ID=MS.gene031961.t1.exon2;Parent=MS.gene031961.t1
chr3.4 CDS 70330958 70331288 70330958 ID=cds.MS.gene031961.t1;Parent=MS.gene031961.t1
chr3.4 exon 70328598 70328846 70328598 ID=MS.gene031961.t1.exon3;Parent=MS.gene031961.t1
chr3.4 CDS 70328598 70328846 70328598 ID=cds.MS.gene031961.t1;Parent=MS.gene031961.t1
Gene Sequence

>MS.gene031961

ATGTTGAAGAGCCAAAAAGATTGGCCAGAGCCCATAATCCGAGTTCAATCCTTGTCTGAAGGCTGCATAGATTCAATCCCTGATAGATATATCAAGCCCCCAACTGATAGGCCAATTGTAGACACTTCTTCTTATGATGATATCAATATCCCAATCATAGACCTTGGAGGCTTAAATGGTGATGACCTTGATGTTCATGCTTCAATCCTTAAGCAAATTTCTGATGCTTGTCGTGATTGGGGTTTCTTCCAAATTGTAAACCATGGAGTGAGTCCTGATTTGATGGACAAAGCTAGGGAAACTTGGCGTCAATTCTTTCACTTGCCTATGGAGGCTAAGCAACAATATGCAAACTCTCCAACAACTTATGAAGGGTATGGAAGTAGACTTGGTGTTGAGAAAGGTGCTATTCTTGATTGGAGTGATTACTACTTCTTGCACTACCTTCCCCTTTCAGTCAAGGATTGCAACAAATGGCCTGCTTCTCCACAATCTTGCAGGTAATATAAGAGAACATTCTTCTCCCACCTCTCTTAGTTCTTACAAACTTCATCCCTCCGGATTTGTCAATCCCGAAGGCAAAAACATCATTTTTTTCTCTCTTTCAGATTCACTCGTGCAAACGCATGAGAAAAATGGTGTTTTTTCTCCGCTGGATTGACAGTCAATCCAGAGGAGTGTGGTTTTTTTATAAAACGGTAAGAGATTCGTAGTTTAATTAGTTAAGTTTTGAGAACTACACATCTATACTTTGTTGGGAGGCCCAATTATAGGAGTATTTTGCATATTGGGCTTTAATAGTTTGTCCAAAGGTTCTTTGTTCAAAGGGTATAAATCTAGGGATCTTTTTGTTTCTTCTATAATATTGAGTCTCTCATGCGTTCTATGCCGTTCGAATTATAAAATTCAAACAGCATAAAAAACTTATAAAATCCTCTCAAACACGTTAAAACATCTCAAGATTTTAAAATTTGAATAGGGTGTGTGAGAAACTCATAGAATAAAAAAAGTATCTCTCTTAAAACTATTGGACTTTCGCTTCACCTTACTTATAAGTTTTTATTTTTTTTAGAGAACCTTACTTATAAGTTTTTTTTTTTTGAGGGAAACCTTACTTATAAGTTATAAACCATTTTTGTCTCACATTTTATCCGATGTGCCACTTCATTTACAAAGACTTGAGTTCTCTCCTACATGTTGTTTGTCCAACAAAAATCCAACGCCAACTCTCTCTATTGGACAAACAGTCAAAATAAGAGAGAATCCAATTCTTTCAACATATAATTATATTTTTCATTTATGAGTGCATTTACTCTTAATTCAATTATGACCATAAAATCAGCTAGAGATGATCCAATTTGATTAATTATAGGTTAAATATGTGCAGGGAAGTGTTTGATGAGTATGGGAGAGAACTAGTGAAACTAAGTGGGAGATTAATGAAGGCTTTGTCATTAAACCTTGGATTAGAAGAAAAAATTCTTCAAAATGCATTTGGGGGTGAAGAGATAGGAGCATGCATGAGAGTGAATTTTTATCCAAAGTGTCCAAGGCCAGAATTGACATTAGGTTTATCATCACACTCTGACCCAGGAGGGATGACTATGTTGCTTCCAGATGACCAAGTGGCTGGTCTACAAGTTCGAAAATTTGATAATTGGATTACGGTCAACCCTGCTAGACATGCCTTCATCGTCAACATTGGTGACCAAATACAGGTAAAATTTAAGATTAAAATATCATATTTTTCTCTCACATAAATTATCCTAACTATAATATGTGGCTAGTATTCATGATAATTTAATACACGAATCTGCCCACGTGGAGAGACACATGGGAACTTGGGGATTGTTCTTTATGATTATTTTAAGTTTATTCTTCAAACAACAAATGGATACTATGCACATGTCTTTCTTAAAATGCACATGCTCTTTACGTACGATGTTGAAAAGGTTAGATAATTTAAATTTGGGATAAAATTAGGTGTATTTGTTCAAATATTTTATAACCATTATTTATGATTTTCTCAGGTCAATAATTTCAAAAAAAATGTATTATTACCCTAAATATTTATTTTAAATTGGAAAAAGTACACAATGTGACTAATTTTAATCCTTTATTTTTTTTTATTATCGAGTGAGATGATTAATTTCATATCCTTTATATTATGTTCTATTTTATTTTATATGAGTCTTGTTAACCAGTGCCCTCAAGGCAATAGTTAAGGAAACTATAAATAAAAAATTTGTCTTGAAAAATATAATTTTTAACTTTTGATTAAACAATAATTACACCACTTTTTATAAATAGTTATTTATTTTGGTTGATTAACCAATATCTTGAGTGTACTGTTTAACATTCTCCTTTTTATATATGCTAGTTTGCTGTGTACGTCATCACTTGCATCACCATATATAGTTTATATGCTTGGGATTTGTGATAAAAGATGAGTTTAGTAGTTGATTGATTCTTTTAACCTATCCTCATATTATTTTATGAAAAATGATATATTGACAACATTTTGGTTGTCCAACATCGTATATCTATACTATATAGATAATATATCATTTTTTAATTAGTTATTTCTCTTTCATATCGTCATATCAATGGTTATAATGGATGTATTTTTTGTACTAATTGTCCAAAAATTGTTGATTTTTAGATGTTCATGTAACATTACTCTTATTATATTAAAAAAAATTCTATACTATTGGAAATTACATTCACATGTCCACATAAATAGATAAACATTTAGCTAGAGTTATCACTTGAAGTCATAGGTTTTTTTTATTGGCAAGACATTTTAGTCAAGATAATTTTAGAAGCAACTAATGCACTTTATATCTCTAAAAGCTATATATGACTCTCAAAATACACATTCAGAGATACCAAAATCATAGATTTATCAGAAAGTATATGTATAGAAGTTTGATGTTTTTGGTTCGGACTGGAACGAAAGAAAAAAAAAACTAATTTAACAATTAATTACTAGTATTTTTTTTTGACAAGAAATTAATTACTAGTTAAGATTGGTCATCTCGGGAAGGAAAAAAACATAATTCTTTTTCCCTATTGAGACTTGAGAGTGAAAAGAAGTTTCTCCCTCGTTTTAGTCTATGTATTACACCATTCGGTCACAAATATAAGCAAAAATCCATCTTTTAGATTCATTCAATAAATGATGTATATTGTCTACAATAAAGTCTACATACATTATTTATTGAATGAATCTAAAACATAGATTTTTGCTTATATTTATGACCGGAGGGTGTATATAGTAGCGAAAATGACAAAAAAAAAACTAAGCTTTAATTTTCTTAATTGTTTTATTGACAAGAGATAAAAATTATGTACTTATATTTATGAAAAATATGTCAGTAAAATGTTTTATAGAAATATCTTTTTTTAACATTTATAGATGTCATAATTTCTTTTTGATTTTTTTATTGACAGAACCATCCAGTTTAATACATATGCATATTTTTATAGAGATCGAATTATGTGATAGAATCATCTGATTTAATCCAATTTACTTATGCAGTTCGACAAGTGACTTAGTGGTTAGACCAGTGACCTCATTACCTTACCGAGTCGATGATCAATTCAATATTTAAGTACTAATTATTGTCCTCGTTATTTTAATTAAATTTGTCGTTTAATTTTTTTTATACTGTTAAAATTTACTAAAGTGAATAATGCTAACGTTGCCTCGTTTTCCATCCCATTTTTCCTTTCCCTCTTTGAGAGTATATGACTTTTTGAGGATATACTCCATATAACTATAAGTTGCATTAATTAATTGGTTAATTTGTTTGTGTCAATTGAACAGGTTCTAAGCAATGCAACATACAAGAGTGTGGAGCATAGAGTGATCGTGAATTCAGATCAAGAGAGACTTTCTCTTGCTTTTTTCTATAACCCAAGAAGTGATATACCCATTGAGCCATTAAAACAGCTTGTCACACCTGAAAGACCTGCACTCTACCCAGCAATGACCTTTGATGAATACAGACTCTTCATTAGAATGAGGGGTCCTTGTGGGAAATCTCAAGTTGAATCTATGAAGTCTTCAAAATAA
Protein sequence

>MS.gene031961.t1

MLKSQKDWPEPIIRVQSLSEGCIDSIPDRYIKPPTDRPIVDTSSYDDINIPIIDLGGLNGDDLDVHASILKQISDACRDWGFFQIVNHGVSPDLMDKARETWRQFFHLPMEAKQQYANSPTTYEGYGSRLGVEKGAILDWSDYYFLHYLPLSVKDCNKWPASPQSCREVFDEYGRELVKLSGRLMKALSLNLGLEEKILQNAFGGEEIGACMRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRKFDNWITVNPARHAFIVNIGDQIQVLSNATYKSVEHRVIVNSDQERLSLAFFYNPRSDIPIEPLKQLVTPERPALYPAMTFDEYRLFIRMRGPCGKSQVESMKSSK