Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033222.t1 | XP_003608950.1 | 99.6 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 6.80E-277 | 962.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033222.t1 | Q9FL12 | 83.7 | 479 | 77 | 1 | 3 | 481 | 111 | 588 | 6.3e-239 | 827.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033222.t1 | G7JNU4 | 99.6 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 4.9e-277 | 962.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene005649 | MS.gene033222 | PPI |
MS.gene07164 | MS.gene033222 | PPI |
MS.gene033222 | MS.gene03012 | PPI |
MS.gene033222 | MS.gene20686 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033222.t1 | MTR_4g106730 | 99.584 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 0.0 | 989 |
MS.gene033222.t1 | MTR_1g088980 | 51.948 | 462 | 217 | 2 | 18 | 479 | 102 | 558 | 2.87e-176 | 508 |
MS.gene033222.t1 | MTR_6g004110 | 50.746 | 469 | 227 | 3 | 11 | 479 | 73 | 537 | 2.86e-163 | 473 |
MS.gene033222.t1 | MTR_6g004110 | 51.157 | 432 | 207 | 3 | 48 | 479 | 3 | 430 | 1.83e-151 | 439 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033222.t1 | AT5G40200 | 83.716 | 479 | 77 | 1 | 3 | 481 | 111 | 588 | 0.0 | 832 |
MS.gene033222.t1 | AT2G47940 | 51.732 | 462 | 218 | 2 | 18 | 479 | 115 | 571 | 4.94e-174 | 503 |
MS.gene033222.t1 | AT2G47940 | 51.732 | 462 | 218 | 2 | 18 | 479 | 114 | 570 | 5.05e-174 | 503 |
MS.gene033222.t1 | AT5G36950 | 50.000 | 464 | 227 | 4 | 17 | 479 | 111 | 570 | 9.24e-156 | 455 |
MS.gene033222.t1 | AT1G65630 | 45.148 | 474 | 245 | 4 | 8 | 480 | 83 | 542 | 2.37e-135 | 402 |
MS.gene033222.t1 | AT1G65640 | 44.612 | 464 | 238 | 4 | 17 | 480 | 71 | 515 | 1.41e-128 | 383 |
MS.gene033222.t1 | AT5G40560 | 43.290 | 462 | 234 | 6 | 18 | 479 | 39 | 472 | 2.16e-115 | 348 |
MS.gene033222.t1 | AT1G65640 | 45.000 | 380 | 195 | 3 | 17 | 396 | 71 | 436 | 3.45e-108 | 328 |
MS.gene033222.t1 | AT3G16540 | 39.785 | 465 | 237 | 5 | 18 | 479 | 106 | 530 | 3.38e-106 | 327 |
MS.gene033222.t1 | AT3G16550 | 37.526 | 485 | 266 | 6 | 1 | 478 | 45 | 499 | 6.67e-98 | 304 |
MS.gene033222.t1 | AT1G51150 | 43.949 | 157 | 85 | 2 | 17 | 172 | 55 | 209 | 1.47e-37 | 137 |
MS.gene033222.t1 | AT5G54745 | 40.341 | 176 | 77 | 5 | 17 | 189 | 42 | 192 | 1.29e-30 | 118 |
MS.gene033222.t1 | AT3G27925 | 26.087 | 299 | 183 | 12 | 46 | 327 | 156 | 433 | 9.12e-12 | 67.4 |
MS.gene033222.t1 | AT3G27925 | 26.087 | 299 | 183 | 12 | 46 | 327 | 156 | 433 | 9.12e-12 | 67.4 |
Find 127 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGATGTCGCCTGTGGATTT+TGG | 0.169302 | 8.3:+16914425 | MS.gene033222:CDS |
CACAGAGCTTCTAGGTTTAC+AGG | 0.192508 | 8.3:+16914568 | MS.gene033222:CDS |
TGAAGCTCCAGTCAAGATTT+TGG | 0.209977 | 8.3:+16916374 | MS.gene033222:CDS |
TCTGGTGGACCTGCATTTAA+TGG | 0.215894 | 8.3:+16914706 | MS.gene033222:CDS |
TGGTTCTGATACTAAGTATT+TGG | 0.241599 | 8.3:+16912067 | MS.gene033222:CDS |
CTATGGACGCGGACCCTATA+TGG | 0.266128 | 8.3:+16911841 | None:intergenic |
CATGGTTCCACAGAGCTTCT+AGG | 0.291078 | 8.3:+16914560 | MS.gene033222:CDS |
CCCTCATATTATATCATTGC+AGG | 0.292872 | 8.3:+16916019 | MS.gene033222:CDS |
GATGTTATCCTTAGCTTTGA+TGG | 0.305411 | 8.3:+16915127 | MS.gene033222:CDS |
GCTATAAATTCTGGAAATTC+TGG | 0.311869 | 8.3:+16914688 | MS.gene033222:CDS |
AAATTCAATATTAAACTTGA+TGG | 0.313467 | 8.3:+16915956 | MS.gene033222:CDS |
ATAGATGCTGCTATAAATTC+TGG | 0.318166 | 8.3:+16914679 | MS.gene033222:CDS |
GGCTTGCCCTTGCTGTGTGC+TGG | 0.318695 | 8.3:-16915995 | None:intergenic |
CGGGGTTGAGTGGCAGAAAA+TGG | 0.329262 | 8.3:+16914997 | MS.gene033222:CDS |
GTTATAGGATTCCCTATTCT+CGG | 0.354820 | 8.3:+16914977 | MS.gene033222:intron |
GGTTTCAAAACCTGAGATTC+AGG | 0.356639 | 8.3:-16915100 | None:intergenic |
GCCACTCAACCCCGAGAATA+GGG | 0.366272 | 8.3:-16914988 | None:intergenic |
ATATTCACCTGTTCCATCAT+TGG | 0.367062 | 8.3:-16915161 | None:intergenic |
CTCCACATCTTCATGTTTGA+GGG | 0.374614 | 8.3:-16914761 | None:intergenic |
CAGTATAGCTCTAGTAGTAC+TGG | 0.378262 | 8.3:+16911966 | MS.gene033222:CDS |
CATGAAGATGTGGAGAATAT+AGG | 0.388044 | 8.3:+16914769 | MS.gene033222:CDS |
TTGGCCACTGTTCTTGCCAT+TGG | 0.392367 | 8.3:+16912086 | MS.gene033222:CDS |
CTCATATCACAGAAATATAC+TGG | 0.394005 | 8.3:+16915890 | MS.gene033222:CDS |
TTAAACTTGATGGTCATAGA+AGG | 0.395091 | 8.3:+16915966 | MS.gene033222:CDS |
GTCGACAATCTCTCCCATAT+AGG | 0.401342 | 8.3:-16911855 | None:intergenic |
GAGAAGAATGGAGGATATAC+TGG | 0.405802 | 8.3:+16914838 | MS.gene033222:CDS |
CCCATTGCCATTCGTAGATC+AGG | 0.406231 | 8.3:-16915025 | None:intergenic |
ATTACAACAAGTTGTTCATC+TGG | 0.408369 | 8.3:-16916426 | None:intergenic |
ATGTTATCCTTAGCTTTGAT+GGG | 0.414306 | 8.3:+16915128 | MS.gene033222:CDS |
TTATAGGATTCCCTATTCTC+GGG | 0.416843 | 8.3:+16914978 | MS.gene033222:intron |
GAGATAGTGTCTCCACCAAT+TGG | 0.418659 | 8.3:-16914491 | None:intergenic |
TCGACAATCTCTCCCATATA+GGG | 0.419400 | 8.3:-16911854 | None:intergenic |
CTGTTGACGATGATGAGTTC+TGG | 0.425115 | 8.3:+16914399 | MS.gene033222:CDS |
GGTGTTGCCTTCGATGGATT+CGG | 0.426109 | 8.3:+16911881 | MS.gene033222:CDS |
TCCTGCAATGATATAATATG+AGG | 0.430469 | 8.3:-16916020 | None:intergenic |
TCCTACTTCTCCTGAATCTC+AGG | 0.432674 | 8.3:+16915090 | MS.gene033222:CDS |
TCTCCACATCTTCATGTTTG+AGG | 0.438460 | 8.3:-16914762 | None:intergenic |
CTCCATTCTTCTCATAATCC+TGG | 0.444733 | 8.3:-16914828 | None:intergenic |
ATGCGCTCTCCATGGCGAAA+TGG | 0.455675 | 8.3:-16915854 | None:intergenic |
TGCCACTCAACCCCGAGAAT+AGG | 0.456310 | 8.3:-16914989 | None:intergenic |
TCTGTATTTCTGAAGGTCGT+TGG | 0.456981 | 8.3:+16916683 | MS.gene033222:intron |
ACAACTTGTTGTAATTTCTC+AGG | 0.458392 | 8.3:+16916434 | MS.gene033222:CDS |
CAAGATGCAGTAACTGTTGT+GGG | 0.465336 | 8.3:+16914464 | MS.gene033222:CDS |
TGGATGAAATGCATGATAAC+TGG | 0.468154 | 8.3:-16914808 | None:intergenic |
CAACAGTTACTGCATCTTGA+AGG | 0.470221 | 8.3:-16914460 | None:intergenic |
ATCCAGGATTATGAGAAGAA+TGG | 0.472684 | 8.3:+16914826 | MS.gene033222:CDS |
TACTGTCTCTTCCTCTGCCA+TGG | 0.473393 | 8.3:-16911948 | None:intergenic |
AGTACTGGGTTTGTGATAAG+TGG | 0.476461 | 8.3:+16911981 | MS.gene033222:CDS |
GACGAGGGTGTTGCCTTCGA+TGG | 0.490265 | 8.3:+16911875 | MS.gene033222:CDS |
TCCTGATCTACGAATGGCAA+TGG | 0.502261 | 8.3:+16915024 | MS.gene033222:CDS |
CATATAGGGTCCGCGTCCAT+AGG | 0.504736 | 8.3:-16911840 | None:intergenic |
AGATAGTGTCTCCACCAATT+GGG | 0.508039 | 8.3:-16914490 | None:intergenic |
CAAACCTCAGAACGAAGATA+AGG | 0.514741 | 8.3:-16916067 | None:intergenic |
AATGGTAAAGGAACCTGTGT+GGG | 0.518960 | 8.3:+16914724 | MS.gene033222:CDS |
AGTTATCATGCATTTCATCC+AGG | 0.524902 | 8.3:+16914810 | MS.gene033222:CDS |
TCTTAAGAGCTTGGCCGCAA+TGG | 0.525473 | 8.3:+16916730 | MS.gene033222:CDS |
GATATTGCCAATGATGGAAC+AGG | 0.525675 | 8.3:+16915154 | MS.gene033222:CDS |
GGACCTGCATTTAATGGTAA+AGG | 0.527175 | 8.3:+16914712 | MS.gene033222:CDS |
TGCCATGGAAGCGAAAAGTT+CGG | 0.527432 | 8.3:-16911933 | None:intergenic |
ACTGTTGTGGGCTACCCAAT+TGG | 0.529356 | 8.3:+16914476 | MS.gene033222:CDS |
GGGGTTGATATTGCCAATGA+TGG | 0.531777 | 8.3:+16915148 | MS.gene033222:CDS |
GTACTGGGTTTGTGATAAGT+GGG | 0.534028 | 8.3:+16911982 | MS.gene033222:CDS |
TATGGACGCGGACCCTATAT+GGG | 0.534223 | 8.3:+16911842 | None:intergenic |
CCTGATCTACGAATGGCAAT+GGG | 0.535924 | 8.3:+16915025 | MS.gene033222:CDS |
GGTTTGTGATAAGTGGGAAG+AGG | 0.537880 | 8.3:+16911988 | MS.gene033222:CDS |
GTTCCTTTACCATTAAATGC+AGG | 0.539174 | 8.3:-16914715 | None:intergenic |
ATTTGATTTAGATTATGAGC+AGG | 0.539800 | 8.3:+16916781 | MS.gene033222:CDS |
ACCTGAGATTCAGGAGAAGT+AGG | 0.541494 | 8.3:-16915091 | None:intergenic |
TCCCTATTCTCGGGGTTGAG+TGG | 0.543312 | 8.3:+16914987 | MS.gene033222:CDS |
GGTTCCTTATCTTCGTTCTG+AGG | 0.546360 | 8.3:+16916063 | MS.gene033222:CDS |
TTTCGCCATGGAGAGCGCAT+TGG | 0.546950 | 8.3:+16915857 | MS.gene033222:CDS |
AGTTTATCCAAAATCTTGAC+TGG | 0.552356 | 8.3:-16916381 | None:intergenic |
TATCAACCCCATCAAAGCTA+AGG | 0.554345 | 8.3:-16915135 | None:intergenic |
ATAAATTCTGGAAATTCTGG+TGG | 0.555899 | 8.3:+16914691 | MS.gene033222:CDS |
TCAAGATGCAGTAACTGTTG+TGG | 0.557203 | 8.3:+16914463 | MS.gene033222:CDS |
TGTTATCCTTAGCTTTGATG+GGG | 0.558128 | 8.3:+16915129 | MS.gene033222:CDS |
AGATCGTCAGACATTGCTGA+TGG | 0.570063 | 8.3:-16916950 | None:intergenic |
AACAGTTACTGCATCTTGAA+GGG | 0.570653 | 8.3:-16914459 | None:intergenic |
TCTCACCAATGCACATTCTG+TGG | 0.578743 | 8.3:+16912013 | MS.gene033222:CDS |
TTCTGTGGAGCATTATACTC+AGG | 0.579455 | 8.3:+16912028 | MS.gene033222:CDS |
GTTACTGCATCTTGAAGGGT+AGG | 0.582527 | 8.3:-16914455 | None:intergenic |
GCTTATTCCAGCACACAGCA+AGG | 0.586438 | 8.3:+16915988 | MS.gene033222:CDS |
GTTTGTGATAAGTGGGAAGA+GGG | 0.587829 | 8.3:+16911989 | MS.gene033222:CDS |
GTCCCTCAAACATGAAGATG+TGG | 0.589333 | 8.3:+16914759 | MS.gene033222:CDS |
GGCAACTCCCCAAAATCCAC+AGG | 0.590552 | 8.3:-16914434 | None:intergenic |
AAATGCATGATAACTGGCGT+TGG | 0.591084 | 8.3:-16914802 | None:intergenic |
TGAAACCAATGCGCTCTCCA+TGG | 0.591141 | 8.3:-16915862 | None:intergenic |
ATCATCGTCAACAGTAAGCA+TGG | 0.594829 | 8.3:-16914390 | None:intergenic |
GGAAAATCCTGATCTACGAA+TGG | 0.598308 | 8.3:+16915018 | MS.gene033222:CDS |
CCTGCAATGATATAATATGA+GGG | 0.598553 | 8.3:-16916019 | None:intergenic |
CTAGAAGCTCTGTGGAACCA+TGG | 0.601251 | 8.3:-16914559 | None:intergenic |
AGTTGTTCATCTGGTGATTG+TGG | 0.604082 | 8.3:-16916417 | None:intergenic |
TTTCCAGTTCCATTTCGCCA+TGG | 0.606699 | 8.3:+16915845 | MS.gene033222:intron |
AGTATAGCTCTAGTAGTACT+GGG | 0.614678 | 8.3:+16911967 | MS.gene033222:CDS |
AATGTCACACTCAGTTCCAA+TGG | 0.620022 | 8.3:-16912102 | None:intergenic |
AATACGTGATACAACGCCAC+TGG | 0.620175 | 8.3:-16914519 | None:intergenic |
ATTGGAACTGAGTGTGACAT+TGG | 0.624727 | 8.3:+16912104 | MS.gene033222:CDS |
CTTATTCCAGCACACAGCAA+GGG | 0.624783 | 8.3:+16915989 | MS.gene033222:CDS |
GTTGTGGGCTACCCAATTGG+TGG | 0.626711 | 8.3:+16914479 | MS.gene033222:CDS |
CTGGCAAGGGATGTCGCCTG+TGG | 0.627026 | 8.3:+16914418 | MS.gene033222:CDS |
TATAGGATTCCCTATTCTCG+GGG | 0.629454 | 8.3:+16914979 | MS.gene033222:intron |
GACGATGATGAGTTCTGGCA+AGG | 0.630166 | 8.3:+16914404 | MS.gene033222:CDS |
TTGACACATATAGGTGCTGG+TGG | 0.631847 | 8.3:+16916527 | MS.gene033222:intron |
CAGGATTATGAGAAGAATGG+AGG | 0.632907 | 8.3:+16914829 | MS.gene033222:CDS |
AAGCTAAGGATAACATCTGA+CGG | 0.633148 | 8.3:-16915121 | None:intergenic |
CATGTATAAACAGTACGGGA+AGG | 0.634604 | 8.3:+16916341 | MS.gene033222:intron |
TTCACCACCGAATCCATCGA+AGG | 0.639367 | 8.3:-16911888 | None:intergenic |
GTTGCCTTCGATGGATTCGG+TGG | 0.650095 | 8.3:+16911884 | MS.gene033222:CDS |
CAGGTTAAGCTCAAGAAACG+TGG | 0.650336 | 8.3:+16912047 | MS.gene033222:CDS |
ATCACAGCTCTCTACCATTG+CGG | 0.652168 | 8.3:-16916744 | None:intergenic |
GACACTATCTCTGTGACCAG+TGG | 0.655702 | 8.3:+16914503 | MS.gene033222:CDS |
ATGCAGCAATCAAAGTATTG+CGG | 0.658146 | 8.3:+16915918 | MS.gene033222:CDS |
TGAAGAGATCGTTAACACCC+AGG | 0.659316 | 8.3:+16916569 | MS.gene033222:CDS |
AGTTCCAATGGCAAGAACAG+TGG | 0.661200 | 8.3:-16912090 | None:intergenic |
CTGGTGGCTGATATTAACAT+CGG | 0.661404 | 8.3:+16916543 | MS.gene033222:CDS |
ATGCTCCACAGAATGTGCAT+TGG | 0.665532 | 8.3:-16912018 | None:intergenic |
ATGGTAAAGGAACCTGTGTG+GGG | 0.668814 | 8.3:+16914725 | MS.gene033222:CDS |
ACGATGATGAGTTCTGGCAA+GGG | 0.672265 | 8.3:+16914405 | MS.gene033222:CDS |
ATGGGAGAGATTGTCGACGA+GGG | 0.674525 | 8.3:+16911860 | MS.gene033222:CDS |
TGAAGCTACACCTATGGACG+CGG | 0.678944 | 8.3:+16911830 | None:intergenic |
CTGTAAACCTAGAAGCTCTG+TGG | 0.679911 | 8.3:-16914567 | None:intergenic |
GGCATGAAGTCTGATCAGAA+AGG | 0.683864 | 8.3:+16915046 | MS.gene033222:CDS |
CTGAAATGCTATCCCCACAC+AGG | 0.690364 | 8.3:-16914737 | None:intergenic |
TGTTGCAAGAATATCTAGCG+TGG | 0.690556 | 8.3:-16916918 | None:intergenic |
TAATGGTAAAGGAACCTGTG+TGG | 0.691655 | 8.3:+16914723 | MS.gene033222:CDS |
GCAATGATATAATATGAGGG+AGG | 0.693321 | 8.3:-16916016 | None:intergenic |
TATGGGAGAGATTGTCGACG+AGG | 0.698274 | 8.3:+16911859 | MS.gene033222:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAATTTATTTTAATT+AGG | - | chr8.3:16913786-16913805 | None:intergenic | 0.0% |
!! | ATAGCATAAATTATTTATAT+TGG | + | chr8.3:16914204-16914223 | MS.gene033222:intron | 10.0% |
!!! | TAGAATTTTACTTTTAAATT+GGG | + | chr8.3:16914887-16914906 | MS.gene033222:intron | 10.0% |
!!! | TTTATATTTTACTTTACTTT+TGG | + | chr8.3:16916244-16916263 | MS.gene033222:intron | 10.0% |
!! | AAATTCAATATTAAACTTGA+TGG | + | chr8.3:16915956-16915975 | MS.gene033222:CDS | 15.0% |
!! | AGAAAAATTTATTTGAATCT+AGG | - | chr8.3:16913523-16913542 | None:intergenic | 15.0% |
!! | TTGATATACATAAAAAGAAA+AGG | - | chr8.3:16912182-16912201 | None:intergenic | 15.0% |
!!! | AATTTAAAGTTTCTTCATAT+TGG | - | chr8.3:16913725-16913744 | None:intergenic | 15.0% |
!!! | GTAGAATTTTACTTTTAAAT+TGG | + | chr8.3:16914886-16914905 | MS.gene033222:intron | 15.0% |
!! | AAAATTGAGTTAGAAAAGAA+TGG | - | chr8.3:16916320-16916339 | None:intergenic | 20.0% |
!! | AAAATTTATTTGAATCTAGG+AGG | - | chr8.3:16913520-16913539 | None:intergenic | 20.0% |
!! | AAATTAACATGATACGTTAT+AGG | - | chr8.3:16913883-16913902 | None:intergenic | 20.0% |
!! | AAATTGAGTTAGAAAAGAAT+GGG | - | chr8.3:16916319-16916338 | None:intergenic | 20.0% |
!! | AAATTTATTTGAATCTAGGA+GGG | - | chr8.3:16913519-16913538 | None:intergenic | 20.0% |
!! | AACAATATGTCTTATGAATT+TGG | + | chr8.3:16915370-16915389 | MS.gene033222:intron | 20.0% |
!! | AACAGAAAAATGAGAAAATT+TGG | - | chr8.3:16914960-16914979 | None:intergenic | 20.0% |
!! | ACAAACTATTTGAATAGAAT+CGG | + | chr8.3:16915483-16915502 | MS.gene033222:intron | 20.0% |
!! | ATCTCATACATAAAATCATT+CGG | - | chr8.3:16913041-16913060 | None:intergenic | 20.0% |
!! | ATTATTTATAGCCTCAAAAA+AGG | - | chr8.3:16913587-16913606 | None:intergenic | 20.0% |
!! | CTTGTTCATATCTAAATAAA+CGG | - | chr8.3:16915606-16915625 | None:intergenic | 20.0% |
!! | TTTATTTAGATATGAACAAG+AGG | + | chr8.3:16915606-16915625 | MS.gene033222:intron | 20.0% |
!!! | ATGTTAATTTTGTGATATAG+CGG | + | chr8.3:16913893-16913912 | MS.gene033222:intron | 20.0% |
!!! | ATTTGAAAGGATCATTTTAT+TGG | + | chr8.3:16912382-16912401 | MS.gene033222:intron | 20.0% |
!!! | TAAATCTTGAATTACTGATT+AGG | - | chr8.3:16913820-16913839 | None:intergenic | 20.0% |
!!! | TCATTTTATTGGAAATTGTA+AGG | + | chr8.3:16912393-16912412 | MS.gene033222:intron | 20.0% |
!!! | TTATTTTAATTAGGATTTGC+TGG | - | chr8.3:16913777-16913796 | None:intergenic | 20.0% |
!!! | TTTTCTCATTTTTCTGTTAT+AGG | + | chr8.3:16914962-16914981 | MS.gene033222:intron | 20.0% |
!!! | TTTTTCATGTATAAACAGTA+CGG | + | chr8.3:16916336-16916355 | MS.gene033222:intron | 20.0% |
! | AATCAAAACTATAACCGATA+AGG | + | chr8.3:16913678-16913697 | MS.gene033222:intron | 25.0% |
! | AGTGTTCAAAAACATAGTAA+TGG | - | chr8.3:16914175-16914194 | None:intergenic | 25.0% |
! | AGTTTAACAGTCTGTTAATA+AGG | + | chr8.3:16915799-16915818 | MS.gene033222:intron | 25.0% |
! | ATAGAATCATACAACATCAA+CGG | + | chr8.3:16913323-16913342 | MS.gene033222:intron | 25.0% |
! | ATATAAAGCTGCATATAACA+AGG | - | chr8.3:16916231-16916250 | None:intergenic | 25.0% |
! | ATATAAAGCTGCATATTACA+AGG | - | chr8.3:16916205-16916224 | None:intergenic | 25.0% |
! | ATCAAAACTATAACCGATAA+GGG | + | chr8.3:16913679-16913698 | MS.gene033222:intron | 25.0% |
! | CAAATAGCAAATGTTAAAGA+TGG | - | chr8.3:16915542-16915561 | None:intergenic | 25.0% |
! | CCAACACAAAATTAAAATGT+AGG | + | chr8.3:16912456-16912475 | MS.gene033222:intron | 25.0% |
! | TACATGATATCAACTATGAT+AGG | + | chr8.3:16915279-16915298 | MS.gene033222:intron | 25.0% |
! | TCATCTTTGACAATCATTAA+TGG | + | chr8.3:16914047-16914066 | MS.gene033222:intron | 25.0% |
! | TCTATATAATAACCATATGC+AGG | - | chr8.3:16913161-16913180 | None:intergenic | 25.0% |
! | TGTAAAAAATCTTAAGAGCT+TGG | + | chr8.3:16916721-16916740 | MS.gene033222:CDS | 25.0% |
!! | ATGTCTATTATAGCTTTTCT+AGG | - | chr8.3:16912674-16912693 | None:intergenic | 25.0% |
!! | ATTTGATTTAGATTATGAGC+AGG | + | chr8.3:16916781-16916800 | MS.gene033222:CDS | 25.0% |
!! | GTTTTGTATTTGTGATTCAT+GGG | + | chr8.3:16912224-16912243 | MS.gene033222:intron | 25.0% |
!! | TCATGAGTTGGATAATAATA+TGG | + | chr8.3:16912739-16912758 | MS.gene033222:intron | 25.0% |
!! | TTCATTACTGACTAATAAAC+TGG | + | chr8.3:16913220-16913239 | MS.gene033222:intron | 25.0% |
!! | TTTTCATGTATAAACAGTAC+GGG | + | chr8.3:16916337-16916356 | MS.gene033222:intron | 25.0% |
!!! | AAGCTCTTAAGATTTTTTAC+AGG | - | chr8.3:16916722-16916741 | None:intergenic | 25.0% |
!!! | AGTTTTGTATTTGTGATTCA+TGG | + | chr8.3:16912223-16912242 | MS.gene033222:intron | 25.0% |
!!! | ATTAGTTTTTCGTAGAATTC+TGG | + | chr8.3:16916097-16916116 | MS.gene033222:intron | 25.0% |
!!! | ATTTGTTTTTTCAACGGTTT+CGG | + | chr8.3:16916042-16916061 | MS.gene033222:CDS | 25.0% |
!!! | CATATTTTTGTTTTCCATGT+TGG | + | chr8.3:16916610-16916629 | MS.gene033222:intron | 25.0% |
!!! | CATCTTTAACATTTGCTATT+TGG | + | chr8.3:16915540-16915559 | MS.gene033222:intron | 25.0% |
!!! | CCTACATTTTAATTTTGTGT+TGG | - | chr8.3:16912459-16912478 | None:intergenic | 25.0% |
!!! | GCTTTTAGCTAATTATAAGA+AGG | + | chr8.3:16913389-16913408 | MS.gene033222:intron | 25.0% |
!!! | TATAGCAATAGTTGATAACA+AGG | - | chr8.3:16914259-16914278 | None:intergenic | 25.0% |
AAAATTGATGAAGGAAAACC+AGG | - | chr8.3:16914648-16914667 | None:intergenic | 30.0% | |
AACAAACCTAAACCATAACA+TGG | - | chr8.3:16915573-16915592 | None:intergenic | 30.0% | |
AATAGAGGAGAAACATTGTA+AGG | + | chr8.3:16913117-16913136 | MS.gene033222:intron | 30.0% | |
AATGATCCTTTCAAATTGAG+TGG | - | chr8.3:16912378-16912397 | None:intergenic | 30.0% | |
AGAGATACTCAGATACAATA+AGG | - | chr8.3:16916507-16916526 | None:intergenic | 30.0% | |
AGTATCTCTTTGACACATAT+AGG | + | chr8.3:16916518-16916537 | MS.gene033222:intron | 30.0% | |
AGTTTATCCAAAATCTTGAC+TGG | - | chr8.3:16916384-16916403 | None:intergenic | 30.0% | |
ATAGATGCTGCTATAAATTC+TGG | + | chr8.3:16914679-16914698 | MS.gene033222:CDS | 30.0% | |
ATCCTTCTCATTATATGCTT+TGG | + | chr8.3:16913367-16913386 | MS.gene033222:intron | 30.0% | |
ATGTTAAAGATGGACAGATA+TGG | - | chr8.3:16915532-16915551 | None:intergenic | 30.0% | |
ATTACAACAAGTTGTTCATC+TGG | - | chr8.3:16916429-16916448 | None:intergenic | 30.0% | |
CAAAAAAGGAAGACTAGTAT+CGG | - | chr8.3:16913573-16913592 | None:intergenic | 30.0% | |
CCTGCAATGATATAATATGA+GGG | - | chr8.3:16916022-16916041 | None:intergenic | 30.0% | |
CTCATATCACAGAAATATAC+TGG | + | chr8.3:16915890-16915909 | MS.gene033222:CDS | 30.0% | |
GACAGATTGAGAAATAAAGA+CGG | - | chr8.3:16916808-16916827 | None:intergenic | 30.0% | |
GCAAGAAACAAAATTGATGA+AGG | - | chr8.3:16914657-16914676 | None:intergenic | 30.0% | |
GTTATCATTGTGTCTAAAAG+AGG | - | chr8.3:16915327-16915346 | None:intergenic | 30.0% | |
TAAAAAGCAGAGAACAACAT+AGG | - | chr8.3:16915721-16915740 | None:intergenic | 30.0% | |
TAAGTACCACTCAATTTGAA+AGG | + | chr8.3:16912369-16912388 | MS.gene033222:intron | 30.0% | |
TCCTGCAATGATATAATATG+AGG | - | chr8.3:16916023-16916042 | None:intergenic | 30.0% | |
TGTAAGGCAATAATAAGTGA+GGG | + | chr8.3:16913133-16913152 | MS.gene033222:intron | 30.0% | |
TTAGTACCATGTTATGGTTT+AGG | + | chr8.3:16915564-16915583 | MS.gene033222:intron | 30.0% | |
TTATGTTATGAATATCCACG+TGG | + | chr8.3:16913415-16913434 | MS.gene033222:intron | 30.0% | |
TTCTCTTATGAGAAAATGCA+TGG | + | chr8.3:16912265-16912284 | MS.gene033222:intron | 30.0% | |
TTGTAAGGCAATAATAAGTG+AGG | + | chr8.3:16913132-16913151 | MS.gene033222:intron | 30.0% | |
! | ATAAATTCTGGAAATTCTGG+TGG | + | chr8.3:16914691-16914710 | MS.gene033222:CDS | 30.0% |
! | ATTCAAATAGTTTGTCGATG+TGG | - | chr8.3:16915478-16915497 | None:intergenic | 30.0% |
! | CTATTGCTATAGCATTTTTG+TGG | + | chr8.3:16914268-16914287 | MS.gene033222:intron | 30.0% |
! | GAGATTTTATCTTATGTCCA+TGG | + | chr8.3:16914542-16914561 | MS.gene033222:CDS | 30.0% |
! | GCTATAAATTCTGGAAATTC+TGG | + | chr8.3:16914688-16914707 | MS.gene033222:CDS | 30.0% |
! | TAGTTGATATCATGTAGAAC+CGG | - | chr8.3:16915275-16915294 | None:intergenic | 30.0% |
! | TTAAACTTGATGGTCATAGA+AGG | + | chr8.3:16915966-16915985 | MS.gene033222:CDS | 30.0% |
! | TTAATAAGGCTTTGTACTCT+TGG | + | chr8.3:16915813-16915832 | MS.gene033222:intron | 30.0% |
! | TTACTGATTAGGACTATTTC+AGG | - | chr8.3:16913809-16913828 | None:intergenic | 30.0% |
!! | ACAACTTGTTGTAATTTCTC+AGG | + | chr8.3:16916434-16916453 | MS.gene033222:CDS | 30.0% |
!! | ATGTTATCCTTAGCTTTGAT+GGG | + | chr8.3:16915128-16915147 | MS.gene033222:CDS | 30.0% |
!! | GGTATATGATAAGAGCATTA+TGG | + | chr8.3:16912760-16912779 | MS.gene033222:intron | 30.0% |
!! | TAATTAGGATTTGCTGGTTA+GGG | - | chr8.3:16913771-16913790 | None:intergenic | 30.0% |
!! | TGGTTCTGATACTAAGTATT+TGG | + | chr8.3:16912067-16912086 | MS.gene033222:CDS | 30.0% |
!! | TTAATTAGGATTTGCTGGTT+AGG | - | chr8.3:16913772-16913791 | None:intergenic | 30.0% |
!! | TTTGGATTAGTACCATGTTA+TGG | + | chr8.3:16915558-16915577 | MS.gene033222:intron | 30.0% |
!!! | ATACTAGTCTTCCTTTTTTG+AGG | + | chr8.3:16913573-16913592 | MS.gene033222:intron | 30.0% |
!!! | TGCAGGATTTGTTTTTTCAA+CGG | + | chr8.3:16916036-16916055 | MS.gene033222:CDS | 30.0% |
AAACATTGCTCATATCAACC+TGG | - | chr8.3:16916590-16916609 | None:intergenic | 35.0% | |
AAATTCGCTAAGCTTTCTTG+TGG | + | chr8.3:16916292-16916311 | MS.gene033222:intron | 35.0% | |
AACAGTTACTGCATCTTGAA+GGG | - | chr8.3:16914462-16914481 | None:intergenic | 35.0% | |
AACATTGCTCATATCAACCT+GGG | - | chr8.3:16916589-16916608 | None:intergenic | 35.0% | |
AAGCTAAGGATAACATCTGA+CGG | - | chr8.3:16915124-16915143 | None:intergenic | 35.0% | |
ACCTGTAGATTCTTTAGCAA+TGG | + | chr8.3:16912601-16912620 | MS.gene033222:intron | 35.0% | |
AGATCTAGAGATTCATGAGT+TGG | + | chr8.3:16912727-16912746 | MS.gene033222:intron | 35.0% | |
AGCCAAAGCATATAATGAGA+AGG | - | chr8.3:16913372-16913391 | None:intergenic | 35.0% | |
AGTTATCATGCATTTCATCC+AGG | + | chr8.3:16914810-16914829 | MS.gene033222:CDS | 35.0% | |
ATATTCACCTGTTCCATCAT+TGG | - | chr8.3:16915164-16915183 | None:intergenic | 35.0% | |
ATCATTCCATGTATGAGTTG+TGG | + | chr8.3:16912914-16912933 | MS.gene033222:intron | 35.0% | |
ATCCAGGATTATGAGAAGAA+TGG | + | chr8.3:16914826-16914845 | MS.gene033222:CDS | 35.0% | |
ATTAAAATGTAGGAGAGACG+AGG | + | chr8.3:16912466-16912485 | MS.gene033222:intron | 35.0% | |
ATTTGTGATTCATGGGACAT+TGG | + | chr8.3:16912231-16912250 | MS.gene033222:intron | 35.0% | |
CATGAAGATGTGGAGAATAT+AGG | + | chr8.3:16914769-16914788 | MS.gene033222:CDS | 35.0% | |
CCCTCATATTATATCATTGC+AGG | + | chr8.3:16916019-16916038 | MS.gene033222:CDS | 35.0% | |
CCTGTAGATTCTTTAGCAAT+GGG | + | chr8.3:16912602-16912621 | MS.gene033222:intron | 35.0% | |
CGTGATAAGGATACTTCAAT+CGG | + | chr8.3:16913630-16913649 | MS.gene033222:intron | 35.0% | |
CTAATCATCTATGCAGATAG+TGG | + | chr8.3:16916868-16916887 | MS.gene033222:intron | 35.0% | |
GCAATGATATAATATGAGGG+AGG | - | chr8.3:16916019-16916038 | None:intergenic | 35.0% | |
GCCAACGTGAAATATATCAA+TGG | + | chr8.3:16915772-16915791 | MS.gene033222:intron | 35.0% | |
GCCATTGATATATTTCACGT+TGG | - | chr8.3:16915776-16915795 | None:intergenic | 35.0% | |
GTCAGTAATGAATAGAACTG+AGG | - | chr8.3:16913212-16913231 | None:intergenic | 35.0% | |
GTTATAGGATTCCCTATTCT+CGG | + | chr8.3:16914977-16914996 | MS.gene033222:intron | 35.0% | |
GTTCCTTTACCATTAAATGC+AGG | - | chr8.3:16914718-16914737 | None:intergenic | 35.0% | |
GTTCTAACGTTGAAGAATAG+AGG | + | chr8.3:16913102-16913121 | MS.gene033222:intron | 35.0% | |
TAAGCTGCATAATGAGATCT+AGG | - | chr8.3:16915683-16915702 | None:intergenic | 35.0% | |
TACTCAGCAAAAACAGCAAA+AGG | - | chr8.3:16916484-16916503 | None:intergenic | 35.0% | |
TCATTCCATGTATGAGTTGT+GGG | + | chr8.3:16912915-16912934 | MS.gene033222:intron | 35.0% | |
TGATTGTCAAAGATGAACAG+AGG | - | chr8.3:16914043-16914062 | None:intergenic | 35.0% | |
TGGATGAAATGCATGATAAC+TGG | - | chr8.3:16914811-16914830 | None:intergenic | 35.0% | |
TTATAGGATTCCCTATTCTC+GGG | + | chr8.3:16914978-16914997 | MS.gene033222:intron | 35.0% | |
TTGTGAGCAATAATCAAGCA+AGG | - | chr8.3:16912979-16912998 | None:intergenic | 35.0% | |
! | AAGCAAGCCTTTGTTCATTT+TGG | + | chr8.3:16914073-16914092 | MS.gene033222:intron | 35.0% |
! | ATGCATGGTAGTTTTTGCAA+AGG | + | chr8.3:16912280-16912299 | MS.gene033222:intron | 35.0% |
! | CGATTGAAGTATCCTTATCA+CGG | - | chr8.3:16913632-16913651 | None:intergenic | 35.0% |
! | GATTGAAGTATCCTTATCAC+GGG | - | chr8.3:16913631-16913650 | None:intergenic | 35.0% |
! | GGTGATGTGAATAATTTGTG+TGG | + | chr8.3:16913344-16913363 | MS.gene033222:intron | 35.0% |
! | TCTACTCTCTGTATTTCTGA+AGG | + | chr8.3:16916676-16916695 | MS.gene033222:intron | 35.0% |
! | TTATCACGGGAAGTTTGTTT+GGG | - | chr8.3:16913618-16913637 | None:intergenic | 35.0% |
!! | AGCAATAGTTGATAACAAGG+TGG | - | chr8.3:16914256-16914275 | None:intergenic | 35.0% |
!! | AGTATAGCTCTAGTAGTACT+GGG | + | chr8.3:16911967-16911986 | MS.gene033222:CDS | 35.0% |
!! | ATGCAGCAATCAAAGTATTG+CGG | + | chr8.3:16915918-16915937 | MS.gene033222:CDS | 35.0% |
!! | GATGTTATCCTTAGCTTTGA+TGG | + | chr8.3:16915127-16915146 | MS.gene033222:CDS | 35.0% |
!! | GTGGTTTGGTATCAGATATT+TGG | + | chr8.3:16914010-16914029 | MS.gene033222:intron | 35.0% |
!! | TGTTATCCTTAGCTTTGATG+GGG | + | chr8.3:16915129-16915148 | MS.gene033222:CDS | 35.0% |
AAATGCATGATAACTGGCGT+TGG | - | chr8.3:16914805-16914824 | None:intergenic | 40.0% | |
AAGCCATATTCCACTAAGTG+GGG | - | chr8.3:16912809-16912828 | None:intergenic | 40.0% | |
AATGGTAAAGGAACCTGTGT+GGG | + | chr8.3:16914724-16914743 | MS.gene033222:CDS | 40.0% | |
AATGTCACACTCAGTTCCAA+TGG | - | chr8.3:16912105-16912124 | None:intergenic | 40.0% | |
ACTATGACGATGAGCAATAC+CGG | - | chr8.3:16915644-16915663 | None:intergenic | 40.0% | |
AGATAGTGTCTCCACCAATT+GGG | - | chr8.3:16914493-16914512 | None:intergenic | 40.0% | |
AGCGGCATGAATTTCAATAG+TGG | + | chr8.3:16913911-16913930 | MS.gene033222:intron | 40.0% | |
AGTTGTTCATCTGGTGATTG+TGG | - | chr8.3:16916420-16916439 | None:intergenic | 40.0% | |
ATCATCGTCAACAGTAAGCA+TGG | - | chr8.3:16914393-16914412 | None:intergenic | 40.0% | |
ATGTCCAAACCACCTACTAT+AGG | - | chr8.3:16912570-16912589 | None:intergenic | 40.0% | |
ATTGGAACTGAGTGTGACAT+TGG | + | chr8.3:16912104-16912123 | MS.gene033222:CDS | 40.0% | |
CAAACAAACTTCCCGTGATA+AGG | + | chr8.3:16913617-16913636 | MS.gene033222:intron | 40.0% | |
CAAACCTCAGAACGAAGATA+AGG | - | chr8.3:16916070-16916089 | None:intergenic | 40.0% | |
CAACAGTTACTGCATCTTGA+AGG | - | chr8.3:16914463-16914482 | None:intergenic | 40.0% | |
CAAGATGCAGTAACTGTTGT+GGG | + | chr8.3:16914464-16914483 | MS.gene033222:CDS | 40.0% | |
CAAGCCATATTCCACTAAGT+GGG | - | chr8.3:16912810-16912829 | None:intergenic | 40.0% | |
CAGGATTATGAGAAGAATGG+AGG | + | chr8.3:16914829-16914848 | MS.gene033222:CDS | 40.0% | |
CATGTATAAACAGTACGGGA+AGG | + | chr8.3:16916341-16916360 | MS.gene033222:intron | 40.0% | |
CCCATTGCTAAAGAATCTAC+AGG | - | chr8.3:16912605-16912624 | None:intergenic | 40.0% | |
CTCCACATCTTCATGTTTGA+GGG | - | chr8.3:16914764-16914783 | None:intergenic | 40.0% | |
CTCCATTCTTCTCATAATCC+TGG | - | chr8.3:16914831-16914850 | None:intergenic | 40.0% | |
CTGGTGGCTGATATTAACAT+CGG | + | chr8.3:16916543-16916562 | MS.gene033222:CDS | 40.0% | |
GACAACATTAGAGAGAGAGT+TGG | + | chr8.3:16912537-16912556 | MS.gene033222:intron | 40.0% | |
GAGAAGAATGGAGGATATAC+TGG | + | chr8.3:16914838-16914857 | MS.gene033222:CDS | 40.0% | |
GATTCATGGGACATTGGATT+GGG | + | chr8.3:16912237-16912256 | MS.gene033222:intron | 40.0% | |
GGAAAATCCTGATCTACGAA+TGG | + | chr8.3:16915018-16915037 | MS.gene033222:CDS | 40.0% | |
GGACCTGCATTTAATGGTAA+AGG | + | chr8.3:16914712-16914731 | MS.gene033222:CDS | 40.0% | |
GGGAGTAGTCAAATCATTAG+AGG | + | chr8.3:16912638-16912657 | MS.gene033222:intron | 40.0% | |
GGTTTCAAAACCTGAGATTC+AGG | - | chr8.3:16915103-16915122 | None:intergenic | 40.0% | |
GTAAAGGACCTCGCAAAAAA+TGG | - | chr8.3:16912319-16912338 | None:intergenic | 40.0% | |
GTACTGGGTTTGTGATAAGT+GGG | + | chr8.3:16911982-16912001 | MS.gene033222:CDS | 40.0% | |
GTCTTGCGTGCTTAGAAAAA+TGG | + | chr8.3:16916825-16916844 | MS.gene033222:intron | 40.0% | |
GTGCATAACAGAACCCTTAT+CGG | - | chr8.3:16913695-16913714 | None:intergenic | 40.0% | |
GTGGCTCATTTAATGTATCC+TGG | + | chr8.3:16914627-16914646 | MS.gene033222:intron | 40.0% | |
GTTTGTGATAAGTGGGAAGA+GGG | + | chr8.3:16911989-16912008 | MS.gene033222:CDS | 40.0% | |
TAATGGTAAAGGAACCTGTG+TGG | + | chr8.3:16914723-16914742 | MS.gene033222:CDS | 40.0% | |
TATAGGATTCCCTATTCTCG+GGG | + | chr8.3:16914979-16914998 | MS.gene033222:intron | 40.0% | |
TATCAACCCCATCAAAGCTA+AGG | - | chr8.3:16915138-16915157 | None:intergenic | 40.0% | |
TCAAGATGCAGTAACTGTTG+TGG | + | chr8.3:16914463-16914482 | MS.gene033222:CDS | 40.0% | |
TCGACAATCTCTCCCATATA+GGG | - | chr8.3:16911857-16911876 | None:intergenic | 40.0% | |
TCTCCACATCTTCATGTTTG+AGG | - | chr8.3:16914765-16914784 | None:intergenic | 40.0% | |
TCTTTGACACATATAGGTGC+TGG | + | chr8.3:16916524-16916543 | MS.gene033222:intron | 40.0% | |
TGATTCATGGGACATTGGAT+TGG | + | chr8.3:16912236-16912255 | MS.gene033222:intron | 40.0% | |
TGCATAATGAGATCTAGGAG+TGG | - | chr8.3:16915678-16915697 | None:intergenic | 40.0% | |
TGTCAAAGATGAACAGAGGA+GGG | - | chr8.3:16914039-16914058 | None:intergenic | 40.0% | |
TGTTGCAAGAATATCTAGCG+TGG | - | chr8.3:16916921-16916940 | None:intergenic | 40.0% | |
TGTTGTATGTGACAGAGTGT+TGG | + | chr8.3:16912422-16912441 | MS.gene033222:intron | 40.0% | |
TTGTCAAAGATGAACAGAGG+AGG | - | chr8.3:16914040-16914059 | None:intergenic | 40.0% | |
! | AGTACTGGGTTTGTGATAAG+TGG | + | chr8.3:16911981-16912000 | MS.gene033222:CDS | 40.0% |
! | CTTATCACGGGAAGTTTGTT+TGG | - | chr8.3:16913619-16913638 | None:intergenic | 40.0% |
! | GATATTGCCAATGATGGAAC+AGG | + | chr8.3:16915154-16915173 | MS.gene033222:CDS | 40.0% |
! | GTTGTATGTGACAGAGTGTT+GGG | + | chr8.3:16912423-16912442 | MS.gene033222:intron | 40.0% |
! | TCTGTATTTCTGAAGGTCGT+TGG | + | chr8.3:16916683-16916702 | MS.gene033222:intron | 40.0% |
! | TGAAGCTCCAGTCAAGATTT+TGG | + | chr8.3:16916374-16916393 | MS.gene033222:CDS | 40.0% |
! | TGGAGGATATACTGGTAATG+TGG | + | chr8.3:16914846-16914865 | MS.gene033222:intron | 40.0% |
! | TTCTGTGGAGCATTATACTC+AGG | + | chr8.3:16912028-16912047 | MS.gene033222:CDS | 40.0% |
! | TTTTTGCGAGGTCCTTTACA+GGG | + | chr8.3:16912320-16912339 | MS.gene033222:intron | 40.0% |
!! | CACCACTAGTTGATGAAAGT+GGG | - | chr8.3:16914610-16914629 | None:intergenic | 40.0% |
!! | CAGTATAGCTCTAGTAGTAC+TGG | + | chr8.3:16911966-16911985 | MS.gene033222:CDS | 40.0% |
!!! | CTCAAGTTCCATTTTTTGCG+AGG | + | chr8.3:16912308-16912327 | MS.gene033222:intron | 40.0% |
!!! | CTGAAGGTCGTTGGTTTTAA+TGG | + | chr8.3:16916692-16916711 | MS.gene033222:intron | 40.0% |
!!! | TTTTTTGCGAGGTCCTTTAC+AGG | + | chr8.3:16912319-16912338 | MS.gene033222:intron | 40.0% |
AACACTGTAACCTGTGTAGC+AGG | - | chr8.3:16913965-16913984 | None:intergenic | 45.0% | |
AATACGTGATACAACGCCAC+TGG | - | chr8.3:16914522-16914541 | None:intergenic | 45.0% | |
ACCTGAGATTCAGGAGAAGT+AGG | - | chr8.3:16915094-16915113 | None:intergenic | 45.0% | |
AGAAGTTCAGCAACCAATCC+GGG | - | chr8.3:16914325-16914344 | None:intergenic | 45.0% | |
AGAGTTATCAGCGTCCAACA+TGG | - | chr8.3:16916627-16916646 | None:intergenic | 45.0% | |
AGATCGTCAGACATTGCTGA+TGG | - | chr8.3:16916953-16916972 | None:intergenic | 45.0% | |
AGATGGACAGATATGGAGAC+TGG | - | chr8.3:16915525-16915544 | None:intergenic | 45.0% | |
AGCAATGGGAGTAGATCAGA+TGG | + | chr8.3:16912616-16912635 | MS.gene033222:intron | 45.0% | |
AGCACCTATAGTAGGTGGTT+TGG | + | chr8.3:16912563-16912582 | MS.gene033222:intron | 45.0% | |
AGCAGAGAACAACATAGGCA+AGG | - | chr8.3:16915716-16915735 | None:intergenic | 45.0% | |
AGCTACTAAAACACCCCTCA+TGG | + | chr8.3:16915240-16915259 | MS.gene033222:intron | 45.0% | |
AGGACGGCCAAAATGAACAA+AGG | - | chr8.3:16914083-16914102 | None:intergenic | 45.0% | |
AGGATGTTGCATTGAATGCG+TGG | + | chr8.3:16912486-16912505 | MS.gene033222:intron | 45.0% | |
AGTTCCAATGGCAAGAACAG+TGG | - | chr8.3:16912093-16912112 | None:intergenic | 45.0% | |
ATCACAGCTCTCTACCATTG+CGG | - | chr8.3:16916747-16916766 | None:intergenic | 45.0% | |
ATGCTCCACAGAATGTGCAT+TGG | - | chr8.3:16912021-16912040 | None:intergenic | 45.0% | |
ATGGTAAAGGAACCTGTGTG+GGG | + | chr8.3:16914725-16914744 | MS.gene033222:CDS | 45.0% | |
ATTGAATGCGTGGTAGGACT+AGG | + | chr8.3:16912496-16912515 | MS.gene033222:intron | 45.0% | |
CAACCCCACTTAGTGGAATA+TGG | + | chr8.3:16912803-16912822 | MS.gene033222:intron | 45.0% | |
CAATGGGAGTAGATCAGATG+GGG | + | chr8.3:16912618-16912637 | MS.gene033222:intron | 45.0% | |
CACAGAGCTTCTAGGTTTAC+AGG | + | chr8.3:16914568-16914587 | MS.gene033222:CDS | 45.0% | |
CACCCACTTTCATCAACTAG+TGG | + | chr8.3:16914605-16914624 | MS.gene033222:intron | 45.0% | |
CAGGTTAAGCTCAAGAAACG+TGG | + | chr8.3:16912047-16912066 | MS.gene033222:CDS | 45.0% | |
CATATTCCACTAAGTGGGGT+TGG | - | chr8.3:16912805-16912824 | None:intergenic | 45.0% | |
CCAAGCCATATTCCACTAAG+TGG | - | chr8.3:16912811-16912830 | None:intergenic | 45.0% | |
CCACTTAGTGGAATATGGCT+TGG | + | chr8.3:16912808-16912827 | MS.gene033222:intron | 45.0% | |
CCACTTTCATCAACTAGTGG+TGG | + | chr8.3:16914608-16914627 | MS.gene033222:intron | 45.0% | |
CCTGATCTACGAATGGCAAT+GGG | + | chr8.3:16915025-16915044 | MS.gene033222:CDS | 45.0% | |
CTACCGTCTTCTTCTTTCTC+TGG | + | chr8.3:16913842-16913861 | MS.gene033222:intron | 45.0% | |
CTGTAAACCTAGAAGCTCTG+TGG | - | chr8.3:16914570-16914589 | None:intergenic | 45.0% | |
CTGTTGACGATGATGAGTTC+TGG | + | chr8.3:16914399-16914418 | MS.gene033222:CDS | 45.0% | |
CTTATTCCAGCACACAGCAA+GGG | + | chr8.3:16915989-16916008 | MS.gene033222:CDS | 45.0% | |
GAGAAGTTCAGCAACCAATC+CGG | - | chr8.3:16914326-16914345 | None:intergenic | 45.0% | |
GAGATAGTGTCTCCACCAAT+TGG | - | chr8.3:16914494-16914513 | None:intergenic | 45.0% | |
GAGCTCTTCACTGAAGTTCA+AGG | - | chr8.3:16915456-16915475 | None:intergenic | 45.0% | |
GCAATGGGAGTAGATCAGAT+GGG | + | chr8.3:16912617-16912636 | MS.gene033222:intron | 45.0% | |
GCACCAGAGAAAGAAGAAGA+CGG | - | chr8.3:16913848-16913867 | None:intergenic | 45.0% | |
GCTACTAAAACACCCCTCAT+GGG | + | chr8.3:16915241-16915260 | MS.gene033222:intron | 45.0% | |
GGCATGAAGTCTGATCAGAA+AGG | + | chr8.3:16915046-16915065 | MS.gene033222:CDS | 45.0% | |
GGTTCCTTATCTTCGTTCTG+AGG | + | chr8.3:16916063-16916082 | MS.gene033222:CDS | 45.0% | |
GGTTTGTGATAAGTGGGAAG+AGG | + | chr8.3:16911988-16912007 | MS.gene033222:CDS | 45.0% | |
GTCCCTCAAACATGAAGATG+TGG | + | chr8.3:16914759-16914778 | MS.gene033222:CDS | 45.0% | |
GTCGACAATCTCTCCCATAT+AGG | - | chr8.3:16911858-16911877 | None:intergenic | 45.0% | |
GTTACTGCATCTTGAAGGGT+AGG | - | chr8.3:16914458-16914477 | None:intergenic | 45.0% | |
GTTGGAGTAGCACCTATAGT+AGG | + | chr8.3:16912555-16912574 | MS.gene033222:intron | 45.0% | |
TCCTACTTCTCCTGAATCTC+AGG | + | chr8.3:16915090-16915109 | MS.gene033222:CDS | 45.0% | |
TCCTGATCTACGAATGGCAA+TGG | + | chr8.3:16915024-16915043 | MS.gene033222:CDS | 45.0% | |
TCGAGTCATAGGTCTAGATG+CGG | + | chr8.3:16913439-16913458 | MS.gene033222:intron | 45.0% | |
TCTCACCAATGCACATTCTG+TGG | + | chr8.3:16912013-16912032 | MS.gene033222:CDS | 45.0% | |
TGAAGAGATCGTTAACACCC+AGG | + | chr8.3:16916569-16916588 | MS.gene033222:CDS | 45.0% | |
TGCCATGGAAGCGAAAAGTT+CGG | - | chr8.3:16911936-16911955 | None:intergenic | 45.0% | |
TGTTGCATTGAATGCGTGGT+AGG | + | chr8.3:16912490-16912509 | MS.gene033222:intron | 45.0% | |
TGTTGGACGCTGATAACTCT+TGG | + | chr8.3:16916627-16916646 | MS.gene033222:intron | 45.0% | |
TTTCCAGTTCCATTTCGCCA+TGG | + | chr8.3:16915845-16915864 | MS.gene033222:intron | 45.0% | |
! | AACCGAACTTTTCGCTTCCA+TGG | + | chr8.3:16911931-16911950 | MS.gene033222:CDS | 45.0% |
! | ACGATGATGAGTTCTGGCAA+GGG | + | chr8.3:16914405-16914424 | MS.gene033222:CDS | 45.0% |
! | CACTGATTGCTGGCCATTAT+GGG | + | chr8.3:16914120-16914139 | MS.gene033222:intron | 45.0% |
! | TCTGGTGGACCTGCATTTAA+TGG | + | chr8.3:16914706-16914725 | MS.gene033222:CDS | 45.0% |
!! | CCACCACTAGTTGATGAAAG+TGG | - | chr8.3:16914611-16914630 | None:intergenic | 45.0% |
!! | GGGGTTGATATTGCCAATGA+TGG | + | chr8.3:16915148-16915167 | MS.gene033222:CDS | 45.0% |
!! | GTTAACTAACCAGCTTGCTG+CGG | + | chr8.3:16915750-16915769 | MS.gene033222:intron | 45.0% |
!! | TAAGTGAGGGTACCTGCATA+TGG | + | chr8.3:16913146-16913165 | MS.gene033222:intron | 45.0% |
!! | TTGACACATATAGGTGCTGG+TGG | + | chr8.3:16916527-16916546 | MS.gene033222:intron | 45.0% |
AATGGCCAGCAATCAGTGGT+GGG | - | chr8.3:16914118-16914137 | None:intergenic | 50.0% | |
ACTAAAACACCCCTCATGGG+AGG | + | chr8.3:16915244-16915263 | MS.gene033222:intron | 50.0% | |
ATCACATAAACCGCGTGAGG+AGG | - | chr8.3:16912346-16912365 | None:intergenic | 50.0% | |
ATCCACGTGGATCGAGTCAT+AGG | + | chr8.3:16913428-16913447 | MS.gene033222:intron | 50.0% | |
ATGGGAGAGATTGTCGACGA+GGG | + | chr8.3:16911860-16911879 | MS.gene033222:CDS | 50.0% | |
ATGTAGCCAACCCCACTTAG+TGG | + | chr8.3:16912796-16912815 | MS.gene033222:intron | 50.0% | |
CAAGAGGAGACACGAAACTC+CGG | + | chr8.3:16915622-16915641 | MS.gene033222:intron | 50.0% | |
CATGGTTCCACAGAGCTTCT+AGG | + | chr8.3:16914560-16914579 | MS.gene033222:CDS | 50.0% | |
CCATAATGGCCAGCAATCAG+TGG | - | chr8.3:16914122-16914141 | None:intergenic | 50.0% | |
CCATGTATGAGTTGTGGGTG+AGG | + | chr8.3:16912920-16912939 | MS.gene033222:intron | 50.0% | |
CCCATTGCCATTCGTAGATC+AGG | - | chr8.3:16915028-16915047 | None:intergenic | 50.0% | |
CCTCACCCACAACTCATACA+TGG | - | chr8.3:16912923-16912942 | None:intergenic | 50.0% | |
CGTATCACATAAACCGCGTG+AGG | - | chr8.3:16912349-16912368 | None:intergenic | 50.0% | |
CTAGAAGCTCTGTGGAACCA+TGG | - | chr8.3:16914562-16914581 | None:intergenic | 50.0% | |
CTGAAATGCTATCCCCACAC+AGG | - | chr8.3:16914740-16914759 | None:intergenic | 50.0% | |
GAATCTAGGAGGGCTTTGCA+AGG | - | chr8.3:16913509-16913528 | None:intergenic | 50.0% | |
GACACTATCTCTGTGACCAG+TGG | + | chr8.3:16914503-16914522 | MS.gene033222:CDS | 50.0% | |
GACAGATATGGAGACTGGAG+AGG | - | chr8.3:16915520-16915539 | None:intergenic | 50.0% | |
GCCATTATGGGAGCTTTCGT+GGG | + | chr8.3:16914132-16914151 | MS.gene033222:intron | 50.0% | |
GCTTATTCCAGCACACAGCA+AGG | + | chr8.3:16915988-16916007 | MS.gene033222:CDS | 50.0% | |
GGAGTAGCACCTATAGTAGG+TGG | + | chr8.3:16912558-16912577 | MS.gene033222:intron | 50.0% | |
TAATGGCCAGCAATCAGTGG+TGG | - | chr8.3:16914119-16914138 | None:intergenic | 50.0% | |
TACTGTCTCTTCCTCTGCCA+TGG | - | chr8.3:16911951-16911970 | None:intergenic | 50.0% | |
TATGGGAGAGATTGTCGACG+AGG | + | chr8.3:16911859-16911878 | MS.gene033222:CDS | 50.0% | |
TCTCCATGGCGAAATGGAAC+TGG | - | chr8.3:16915851-16915870 | None:intergenic | 50.0% | |
TCTTAAGAGCTTGGCCGCAA+TGG | + | chr8.3:16916730-16916749 | MS.gene033222:CDS | 50.0% | |
TGAAACCAATGCGCTCTCCA+TGG | - | chr8.3:16915865-16915884 | None:intergenic | 50.0% | |
TGTGGTCTAACACCACTCCA+CGG | + | chr8.3:16914286-16914305 | MS.gene033222:intron | 50.0% | |
TTCACCACCGAATCCATCGA+AGG | - | chr8.3:16911891-16911910 | None:intergenic | 50.0% | |
TTGGCCACTGTTCTTGCCAT+TGG | + | chr8.3:16912086-16912105 | MS.gene033222:CDS | 50.0% | |
TTTCGTGGGCTCACACTTGT+TGG | + | chr8.3:16914146-16914165 | MS.gene033222:intron | 50.0% | |
! | ACTGTTGTGGGCTACCCAAT+TGG | + | chr8.3:16914476-16914495 | MS.gene033222:CDS | 50.0% |
! | ACTTTTCGCTTCCATGGCAG+AGG | + | chr8.3:16911937-16911956 | MS.gene033222:CDS | 50.0% |
! | CCACTGATTGCTGGCCATTA+TGG | + | chr8.3:16914119-16914138 | MS.gene033222:intron | 50.0% |
! | CTTTTGCAGTCTTCGTGCGA+AGG | - | chr8.3:16916895-16916914 | None:intergenic | 50.0% |
! | GACGATGATGAGTTCTGGCA+AGG | + | chr8.3:16914404-16914423 | MS.gene033222:CDS | 50.0% |
! | GATGTCGCCTGTGGATTTTG+GGG | + | chr8.3:16914427-16914446 | MS.gene033222:CDS | 50.0% |
! | GGATGTCGCCTGTGGATTTT+GGG | + | chr8.3:16914426-16914445 | MS.gene033222:CDS | 50.0% |
! | GGTGTTGCCTTCGATGGATT+CGG | + | chr8.3:16911881-16911900 | MS.gene033222:CDS | 50.0% |
!! | TTCATTTTGGCCGTCCTCAC+AGG | + | chr8.3:16914086-16914105 | MS.gene033222:intron | 50.0% |
AACCGGTAAGTCCTCCCATG+AGG | - | chr8.3:16915258-16915277 | None:intergenic | 55.0% | |
AATGCGTGGTAGGACTAGGC+GGG | + | chr8.3:16912500-16912519 | MS.gene033222:intron | 55.0% | |
ACATGCCTGTTGTCGCTCTG+TGG | + | chr8.3:16913991-16914010 | MS.gene033222:intron | 55.0% | |
ACCGGTAAGTCCTCCCATGA+GGG | - | chr8.3:16915257-16915276 | None:intergenic | 55.0% | |
ATGCGCTCTCCATGGCGAAA+TGG | - | chr8.3:16915857-16915876 | None:intergenic | 55.0% | |
CAGCAACCAATCCGGGATAG+CGG | - | chr8.3:16914318-16914337 | None:intergenic | 55.0% | |
CCAAACCACAGAGCGACAAC+AGG | - | chr8.3:16913999-16914018 | None:intergenic | 55.0% | |
CCTGTTGTCGCTCTGTGGTT+TGG | + | chr8.3:16913996-16914015 | MS.gene033222:intron | 55.0% | |
CGGGGTTGAGTGGCAGAAAA+TGG | + | chr8.3:16914997-16915016 | MS.gene033222:CDS | 55.0% | |
CTAGGAGGGCTTTGCAAGGA+CGG | - | chr8.3:16913505-16913524 | None:intergenic | 55.0% | |
GAATGCGTGGTAGGACTAGG+CGG | + | chr8.3:16912499-16912518 | MS.gene033222:intron | 55.0% | |
GACCTATGACTCGATCCACG+TGG | - | chr8.3:16913433-16913452 | None:intergenic | 55.0% | |
GCCACTCAACCCCGAGAATA+GGG | - | chr8.3:16914991-16915010 | None:intergenic | 55.0% | |
GCCCACGAAAGCTCCCATAA+TGG | - | chr8.3:16914136-16914155 | None:intergenic | 55.0% | |
GGCAACTCCCCAAAATCCAC+AGG | - | chr8.3:16914437-16914456 | None:intergenic | 55.0% | |
GGCCATTATGGGAGCTTTCG+TGG | + | chr8.3:16914131-16914150 | MS.gene033222:intron | 55.0% | |
GTGTTGCAGCACACTGTAGC+TGG | + | chr8.3:16913933-16913952 | MS.gene033222:intron | 55.0% | |
TAGGAGGGCTTTGCAAGGAC+GGG | - | chr8.3:16913504-16913523 | None:intergenic | 55.0% | |
TCCCTATTCTCGGGGTTGAG+TGG | + | chr8.3:16914987-16915006 | MS.gene033222:CDS | 55.0% | |
TGCCACTCAACCCCGAGAAT+AGG | - | chr8.3:16914992-16915011 | None:intergenic | 55.0% | |
TTGCAGCACACTGTAGCTGG+TGG | + | chr8.3:16913936-16913955 | MS.gene033222:intron | 55.0% | |
! | GGGATGTCGCCTGTGGATTT+TGG | + | chr8.3:16914425-16914444 | MS.gene033222:CDS | 55.0% |
! | GTTGCCTTCGATGGATTCGG+TGG | + | chr8.3:16911884-16911903 | MS.gene033222:CDS | 55.0% |
! | GTTGTGGGCTACCCAATTGG+TGG | + | chr8.3:16914479-16914498 | MS.gene033222:CDS | 55.0% |
! | TTGTGCCCACCACTGATTGC+TGG | + | chr8.3:16914110-16914129 | MS.gene033222:intron | 55.0% |
! | TTTCGCCATGGAGAGCGCAT+TGG | + | chr8.3:16915857-16915876 | MS.gene033222:CDS | 55.0% |
CCCCTCATGGGAGGACTTAC+CGG | + | chr8.3:16915253-16915272 | MS.gene033222:intron | 60.0% | |
CCGGTAAGTCCTCCCATGAG+GGG | - | chr8.3:16915256-16915275 | None:intergenic | 60.0% | |
CTGGTGGCTTCCTGCTACAC+AGG | + | chr8.3:16913952-16913971 | MS.gene033222:intron | 60.0% | |
CTTTACAGGGCCTCCTCACG+CGG | + | chr8.3:16912333-16912352 | MS.gene033222:intron | 60.0% | |
TGGGCACAAGCCTGTGAGGA+CGG | - | chr8.3:16914099-16914118 | None:intergenic | 60.0% | |
!! | GACGAGGGTGTTGCCTTCGA+TGG | + | chr8.3:16911875-16911894 | MS.gene033222:CDS | 60.0% |
CGCGTGAGGAGGCCCTGTAA+AGG | - | chr8.3:16912335-16912354 | None:intergenic | 65.0% | |
CTGGCAAGGGATGTCGCCTG+TGG | + | chr8.3:16914418-16914437 | MS.gene033222:CDS | 65.0% | |
TCACGTTGGCCGCAGCAAGC+TGG | - | chr8.3:16915762-16915781 | None:intergenic | 65.0% | |
! | CCAATCCGGGATAGCGGCAC+AGG | - | chr8.3:16914312-16914331 | None:intergenic | 65.0% |
! | CCTGTGCCGCTATCCCGGAT+TGG | + | chr8.3:16914309-16914328 | MS.gene033222:intron | 65.0% |
! | GGCTTGCCCTTGCTGTGTGC+TGG | - | chr8.3:16915998-16916017 | None:intergenic | 65.0% |
!! | GTGGTGGGCACAAGCCTGTG+AGG | - | chr8.3:16914103-16914122 | None:intergenic | 65.0% |
TAGCGGCACAGGCCGTGGAG+TGG | - | chr8.3:16914301-16914320 | None:intergenic | 70.0% | |
! | CACGGCCTGTGCCGCTATCC+CGG | + | chr8.3:16914304-16914323 | MS.gene033222:intron | 70.0% |
! | CGGGATAGCGGCACAGGCCG+TGG | - | chr8.3:16914306-16914325 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 16911843 | 16916982 | 16911843 | ID=MS.gene033222 |
chr8.3 | mRNA | 16911843 | 16916982 | 16911843 | ID=MS.gene033222.t1;Parent=MS.gene033222 |
chr8.3 | exon | 16911843 | 16912125 | 16911843 | ID=MS.gene033222.t1.exon1;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16911843 | 16912125 | 16911843 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16914390 | 16914589 | 16914390 | ID=MS.gene033222.t1.exon2;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16914390 | 16914589 | 16914390 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16914679 | 16914859 | 16914679 | ID=MS.gene033222.t1.exon3;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16914679 | 16914859 | 16914679 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16914984 | 16915175 | 16914984 | ID=MS.gene033222.t1.exon4;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16914984 | 16915175 | 16914984 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16915852 | 16916084 | 16915852 | ID=MS.gene033222.t1.exon5;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16915852 | 16916084 | 16915852 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16916354 | 16916455 | 16916354 | ID=MS.gene033222.t1.exon6;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16916354 | 16916455 | 16916354 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16916540 | 16916590 | 16916540 | ID=MS.gene033222.t1.exon7;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16916540 | 16916590 | 16916540 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16916698 | 16916802 | 16916698 | ID=MS.gene033222.t1.exon8;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16916698 | 16916802 | 16916698 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
chr8.3 | exon | 16916884 | 16916982 | 16916884 | ID=MS.gene033222.t1.exon9;Parent=MS.gene033222.t1 |
chr8.3 | CDS | 16916884 | 16916982 | 16916884 | ID=cds.MS.gene033222.t1;Parent=MS.gene033222.t1 |
Gene Sequence |
Protein sequence |