Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034131.t1 | XP_003604299.2 | 90.1 | 425 | 34 | 4 | 1 | 419 | 1 | 423 | 8.20E-202 | 713 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034131.t1 | A8F724 | 50.0 | 82 | 39 | 1 | 321 | 400 | 5 | 86 | 5.0e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034131.t1 | G7JFN7 | 90.1 | 425 | 34 | 4 | 1 | 419 | 1 | 423 | 5.9e-202 | 713.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034131 | MS.gene063816 | PPI |
| MS.gene000604 | MS.gene034131 | PPI |
| MS.gene88428 | MS.gene034131 | PPI |
| MS.gene034131 | MS.gene016534 | PPI |
| MS.gene034131 | MS.gene034255 | PPI |
| MS.gene034131 | MS.gene87189 | PPI |
| MS.gene034131 | MS.gene053230 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034131.t1 | MTR_4g009100 | 93.176 | 425 | 21 | 4 | 1 | 419 | 1 | 423 | 0.0 | 744 |
| MS.gene034131.t1 | MTR_4g009100 | 92.077 | 366 | 21 | 4 | 1 | 360 | 1 | 364 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034131.t1 | AT1G15810 | 62.019 | 208 | 69 | 3 | 199 | 405 | 219 | 417 | 4.39e-81 | 256 |
| MS.gene034131.t1 | AT1G80620 | 41.355 | 428 | 187 | 13 | 16 | 407 | 15 | 414 | 5.85e-81 | 255 |
Find 107 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGCCAATCTCGTTTC+AGG | 0.197152 | 4.4:+89840658 | MS.gene034131:CDS |
| TCAGCAGAGGACATGTTATC+TGG | 0.221149 | 4.4:-89842601 | None:intergenic |
| TATGTTGGGGTTTATTTAAT+TGG | 0.228847 | 4.4:-89844991 | None:intergenic |
| TTTGCTCAAGATATCATCTT+TGG | 0.250670 | 4.4:-89840579 | None:intergenic |
| GGAATCAGGTGCGGTGGTTT+TGG | 0.276997 | 4.4:-89840618 | None:intergenic |
| CGGGCTTTATAAGTATATTC+TGG | 0.291890 | 4.4:-89844945 | None:intergenic |
| TTAGCCAAGGTGAATGATTC+AGG | 0.297727 | 4.4:+89840917 | MS.gene034131:CDS |
| GTGAATGATTCAGGGAGTTT+TGG | 0.301942 | 4.4:+89840926 | MS.gene034131:CDS |
| CGTATCCGAAGCGGAATCTT+TGG | 0.307010 | 4.4:-89840708 | None:intergenic |
| TTATATATGCATGGTGAATT+AGG | 0.318193 | 4.4:+89840959 | MS.gene034131:CDS |
| TACTAACATGAAGCTTTATT+AGG | 0.327657 | 4.4:-89841181 | None:intergenic |
| CTATTCCCCGCTGACATATT+TGG | 0.329042 | 4.4:-89840842 | None:intergenic |
| TTGTTACCGGATTCGATGTT+TGG | 0.341309 | 4.4:+89840875 | MS.gene034131:CDS |
| AGTGGTGGAGAGTAGGGTTT+GGG | 0.342066 | 4.4:-89840398 | None:intergenic |
| CGATGTTTGGGAAGGAGATA+AGG | 0.345042 | 4.4:+89840888 | MS.gene034131:CDS |
| AGCTTGGAGTTCCACCAATC+AGG | 0.379248 | 4.4:-89842038 | None:intergenic |
| TAAAGCCCGGACTGGTAAAT+CGG | 0.389131 | 4.4:+89844959 | MS.gene034131:CDS |
| TCTGACTTGTTGTAAGGATT+CGG | 0.391613 | 4.4:-89840486 | None:intergenic |
| AATATGTCAGCGGGGAATAG+TGG | 0.398052 | 4.4:+89840845 | MS.gene034131:CDS |
| TGATGGAGTGGTGGAGAGTA+GGG | 0.398977 | 4.4:-89840404 | None:intergenic |
| TAGTGGGACGAGTTTGTTAC+CGG | 0.405301 | 4.4:+89840862 | MS.gene034131:CDS |
| GAGTGGTGGAGAGTAGGGTT+TGG | 0.415098 | 4.4:-89840399 | None:intergenic |
| GTGATGGAGTGGTGGAGAGT+AGG | 0.417770 | 4.4:-89840405 | None:intergenic |
| TGCTTTAGGATGTGCATTCT+CGG | 0.419325 | 4.4:+89844811 | MS.gene034131:intron |
| TGTGGCTCTGCTCGTGTTCA+AGG | 0.419529 | 4.4:+89842682 | MS.gene034131:CDS |
| TAAAGAGCATCTTGTTGAAA+AGG | 0.423407 | 4.4:+89842077 | MS.gene034131:CDS |
| CTTAGAGAGAACAAAACAAT+AGG | 0.423531 | 4.4:-89844904 | None:intergenic |
| CTCAAGTGAAAGGAAAAGAT+TGG | 0.434328 | 4.4:+89841005 | MS.gene034131:CDS |
| GTTAATAGATCATCGGAATC+AGG | 0.434445 | 4.4:-89840632 | None:intergenic |
| TGGAGGTGGAGAAGAGGTGA+TGG | 0.434925 | 4.4:-89840421 | None:intergenic |
| AAAACTACCATCGGTGGTGG+TGG | 0.439256 | 4.4:+89840734 | MS.gene034131:CDS |
| GTTGAAGAAAGTGAGGGAAA+TGG | 0.440483 | 4.4:+89841054 | MS.gene034131:CDS |
| TGTTACCGGATTCGATGTTT+GGG | 0.445980 | 4.4:+89840876 | MS.gene034131:CDS |
| GGTCTCCACCTCGGCGTCAC+CGG | 0.450181 | 4.4:-89840821 | None:intergenic |
| TGATGATAGATGCTTAATCT+TGG | 0.455799 | 4.4:-89842899 | None:intergenic |
| GATGTTTGGGAAGGAGATAA+GGG | 0.455958 | 4.4:+89840889 | MS.gene034131:CDS |
| CTCTTCTCCACCTCCAACTC+CGG | 0.457603 | 4.4:+89840428 | MS.gene034131:CDS |
| ACCGTCATTGTCACCGGAGT+TGG | 0.459507 | 4.4:-89840441 | None:intergenic |
| GTTGAACACTTTATTTGTAT+CGG | 0.460097 | 4.4:-89841110 | None:intergenic |
| AACTACCATCGGTGGTGGTG+GGG | 0.461512 | 4.4:+89840736 | MS.gene034131:CDS |
| GGAGGCTTTGACAAGTAGCT+TGG | 0.462551 | 4.4:-89842054 | None:intergenic |
| ATTGATATGTTGTCCCTGAT+TGG | 0.468754 | 4.4:+89842024 | MS.gene034131:CDS |
| TACATATCCTGAAACGAGAT+TGG | 0.469151 | 4.4:-89840665 | None:intergenic |
| ACTACCATCGGTGGTGGTGG+GGG | 0.471057 | 4.4:+89840737 | MS.gene034131:CDS |
| TGAGCTTCTGACTTGTTGTA+AGG | 0.477275 | 4.4:-89840492 | None:intergenic |
| AAACTACCATCGGTGGTGGT+GGG | 0.493683 | 4.4:+89840735 | MS.gene034131:CDS |
| TGCGAGGGAGAGAGAGGAGA+AGG | 0.494280 | 4.4:-89840545 | None:intergenic |
| TCCTTCCCAAACATCGAATC+CGG | 0.494755 | 4.4:-89840881 | None:intergenic |
| GTCGCCACCGTCATTGTCAC+CGG | 0.497517 | 4.4:-89840447 | None:intergenic |
| GTGAGAGGTTGAAGAAAGTG+AGG | 0.507809 | 4.4:+89841047 | MS.gene034131:CDS |
| GTCATTGTCACCGGAGTTGG+AGG | 0.510211 | 4.4:-89840438 | None:intergenic |
| TGGAGACCAAATATGTCAGC+GGG | 0.513868 | 4.4:+89840836 | MS.gene034131:CDS |
| CAGCAGAGGACATGTTATCT+GGG | 0.517850 | 4.4:-89842600 | None:intergenic |
| ATTGTCACCGGAGTTGGAGG+TGG | 0.527310 | 4.4:-89840435 | None:intergenic |
| AAAGCCCGGACTGGTAAATC+GGG | 0.529645 | 4.4:+89844960 | MS.gene034131:CDS |
| GTGGAGAAGAGGTGATGGAG+TGG | 0.532903 | 4.4:-89840416 | None:intergenic |
| TCAACAAGATGCTCTTTAGG+AGG | 0.535728 | 4.4:-89842072 | None:intergenic |
| GAGAAGAGGTGATGGAGTGG+TGG | 0.540124 | 4.4:-89840413 | None:intergenic |
| CTTCTGAGTTAATAGATCAT+CGG | 0.542609 | 4.4:-89840639 | None:intergenic |
| TAGGATGTGCATTCTCGGAA+AGG | 0.545917 | 4.4:+89844816 | MS.gene034131:intron |
| GCTTGGAGTTCCACCAATCA+GGG | 0.546915 | 4.4:-89842037 | None:intergenic |
| TGTAAGGATTCGGAGAAGGA+GGG | 0.550289 | 4.4:-89840476 | None:intergenic |
| ATCATCAGTTCTACACAAGA+AGG | 0.554571 | 4.4:+89842915 | MS.gene034131:CDS |
| CTTCAACCTCTCACTCAACT+CGG | 0.554778 | 4.4:-89841038 | None:intergenic |
| GTCACCCGATTTACCAGTCC+GGG | 0.556020 | 4.4:-89844964 | None:intergenic |
| CGATTGCCGAGTTGAGTGAG+AGG | 0.557053 | 4.4:+89841032 | MS.gene034131:CDS |
| TTGTAAGGATTCGGAGAAGG+AGG | 0.557469 | 4.4:-89840477 | None:intergenic |
| CGGAGTTGGAGGTGGAGAAG+AGG | 0.562478 | 4.4:-89840427 | None:intergenic |
| ATATGTCAGCGGGGAATAGT+GGG | 0.562574 | 4.4:+89840846 | MS.gene034131:CDS |
| ACCGGATTCGATGTTTGGGA+AGG | 0.563280 | 4.4:+89840880 | MS.gene034131:CDS |
| TGATAGCAATGGTTCAAAAG+AGG | 0.564231 | 4.4:+89844841 | MS.gene034131:CDS |
| TTGTTGTAAGGATTCGGAGA+AGG | 0.565751 | 4.4:-89840480 | None:intergenic |
| TAGCCAAGGTGAATGATTCA+GGG | 0.570378 | 4.4:+89840918 | MS.gene034131:CDS |
| CGTCACCCGATTTACCAGTC+CGG | 0.571673 | 4.4:-89844965 | None:intergenic |
| GAAGGTGTTGTGTTTGACGT+TGG | 0.572394 | 4.4:-89840527 | None:intergenic |
| TCGATCCAAAGATTCCGCTT+CGG | 0.574006 | 4.4:+89840703 | MS.gene034131:CDS |
| ATTGGACTTGATGTGATTCG+TGG | 0.579464 | 4.4:+89840761 | MS.gene034131:CDS |
| AAGATGTCCGAGTCAGATTG+TGG | 0.579927 | 4.4:+89842664 | MS.gene034131:CDS |
| CAGAATATACTTATAAAGCC+CGG | 0.580244 | 4.4:+89844946 | MS.gene034131:CDS |
| TGAGAGGTTGAAGAAAGTGA+GGG | 0.583053 | 4.4:+89841048 | MS.gene034131:CDS |
| TATACTTATAAAGCCCGGAC+TGG | 0.588412 | 4.4:+89844951 | MS.gene034131:CDS |
| TTGGGAAGGAGATAAGGGAT+AGG | 0.591410 | 4.4:+89840894 | MS.gene034131:CDS |
| AAATTGAGACCTCAAGTGAA+AGG | 0.593143 | 4.4:+89840995 | MS.gene034131:CDS |
| ATTGAAAATTGAGCTGACAA+AGG | 0.594958 | 4.4:+89842627 | MS.gene034131:CDS |
| AATCCCAGTCGGTTCTTCTG+AGG | 0.595536 | 4.4:-89844881 | None:intergenic |
| TCGAAAACTACCATCGGTGG+TGG | 0.596020 | 4.4:+89840731 | MS.gene034131:CDS |
| AATACCTCAGAAGAACCGAC+TGG | 0.596907 | 4.4:+89844877 | MS.gene034131:CDS |
| GATAAGGGATAGGTTAGCCA+AGG | 0.602083 | 4.4:+89840904 | MS.gene034131:CDS |
| GACATATTTGGTCTCCACCT+CGG | 0.603815 | 4.4:-89840830 | None:intergenic |
| TCCAACTCCGGTGACAATGA+CGG | 0.604175 | 4.4:+89840440 | MS.gene034131:CDS |
| GATATGTTGTCCCTGATTGG+TGG | 0.604709 | 4.4:+89842027 | MS.gene034131:CDS |
| AGACGCCGGTGACGCCGAGG+TGG | 0.621545 | 4.4:+89840816 | MS.gene034131:CDS |
| AGCAGAGCCACAATCTGACT+CGG | 0.621918 | 4.4:-89842671 | None:intergenic |
| ATCATCGGAATCAGGTGCGG+TGG | 0.623646 | 4.4:-89840624 | None:intergenic |
| ACTCCCTGAATCATTCACCT+TGG | 0.637166 | 4.4:-89840921 | None:intergenic |
| ACTGTTAGGTTATATATGCA+TGG | 0.640796 | 4.4:+89840950 | MS.gene034131:CDS |
| TCGGAAAGGTCTGATAGCAA+TGG | 0.642289 | 4.4:+89844830 | MS.gene034131:CDS |
| ATCAGACGCCGGTGACGCCG+AGG | 0.642782 | 4.4:+89840813 | MS.gene034131:CDS |
| GATACGTCGAAAACTACCAT+CGG | 0.667277 | 4.4:+89840725 | MS.gene034131:CDS |
| ATACCTCAGAAGAACCGACT+GGG | 0.671133 | 4.4:+89844878 | MS.gene034131:CDS |
| GTGGAGACCAAATATGTCAG+CGG | 0.677529 | 4.4:+89840835 | MS.gene034131:CDS |
| TAGATCATCGGAATCAGGTG+CGG | 0.679666 | 4.4:-89840627 | None:intergenic |
| AAATTCGACGAATCAGACGC+CGG | 0.695623 | 4.4:+89840802 | MS.gene034131:CDS |
| ACGTCGAAAACTACCATCGG+TGG | 0.701049 | 4.4:+89840728 | MS.gene034131:CDS |
| AAAACAATAGGAATCCCAGT+CGG | 0.725069 | 4.4:-89844892 | None:intergenic |
| AACTCCGGTGACAATGACGG+TGG | 0.731984 | 4.4:+89840443 | MS.gene034131:CDS |
| GGAGACCAAATATGTCAGCG+GGG | 0.770843 | 4.4:+89840837 | MS.gene034131:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTAATGTTTGACTA+TGG | - | chr4.4:89842313-89842332 | None:intergenic | 15.0% |
| !! | TAAAATAAATCTATTGTAGA+TGG | + | chr4.4:89841885-89841904 | MS.gene034131:intron | 15.0% |
| !! | TATATGAAAAATATAAGTGA+TGG | + | chr4.4:89841980-89841999 | MS.gene034131:intron | 15.0% |
| !!! | TCTATTTTTAATCATGTAAT+TGG | - | chr4.4:89844286-89844305 | None:intergenic | 15.0% |
| !!! | TTCTTTTAAATCTAGTATAA+CGG | + | chr4.4:89843111-89843130 | MS.gene034131:intron | 15.0% |
| !!! | TTTTTGAATTTTAAGTTTGT+TGG | - | chr4.4:89844060-89844079 | None:intergenic | 15.0% |
| !! | AAAAAAATTAGTACTAGAGT+TGG | - | chr4.4:89843240-89843259 | None:intergenic | 20.0% |
| !! | ACTGGTAAAGATTAAAAATA+AGG | - | chr4.4:89843626-89843645 | None:intergenic | 20.0% |
| !! | ACTTTATAAATATTCTGCAA+AGG | + | chr4.4:89843432-89843451 | MS.gene034131:intron | 20.0% |
| !! | AGTTAATTCAAAATATCAAG+CGG | - | chr4.4:89842460-89842479 | None:intergenic | 20.0% |
| !! | ATGAACATAAGAATTTAATC+AGG | - | chr4.4:89844503-89844522 | None:intergenic | 20.0% |
| !! | ATGACCAAAATATATTTGTT+TGG | - | chr4.4:89841659-89841678 | None:intergenic | 20.0% |
| !! | CCAATTCAAAATTATATTGA+AGG | - | chr4.4:89844567-89844586 | None:intergenic | 20.0% |
| !! | CTGGTAAAGATTAAAAATAA+GGG | - | chr4.4:89843625-89843644 | None:intergenic | 20.0% |
| !! | GAATATTTATAAAGTTGTAC+AGG | - | chr4.4:89843427-89843446 | None:intergenic | 20.0% |
| !! | GTAATAGCTTAAAAAAAAGT+GGG | - | chr4.4:89842350-89842369 | None:intergenic | 20.0% |
| !! | TAAAGTATAGCAAACATATT+TGG | - | chr4.4:89842769-89842788 | None:intergenic | 20.0% |
| !! | TAATAGCTTAAAAAAAAGTG+GGG | - | chr4.4:89842349-89842368 | None:intergenic | 20.0% |
| !! | TCATAAAAATCATAGCTTAA+AGG | + | chr4.4:89843941-89843960 | MS.gene034131:intron | 20.0% |
| !! | TCTTAGTAAAAGAATATTGT+TGG | + | chr4.4:89844112-89844131 | MS.gene034131:intron | 20.0% |
| !! | TGAACATAAGAATTTAATCA+GGG | - | chr4.4:89844502-89844521 | None:intergenic | 20.0% |
| !! | TGTAATAGCTTAAAAAAAAG+TGG | - | chr4.4:89842351-89842370 | None:intergenic | 20.0% |
| !! | TGTTCGATATTAAATTTAGA+CGG | + | chr4.4:89842741-89842760 | MS.gene034131:intron | 20.0% |
| !! | TTATGAGAAATGAAATACTA+GGG | - | chr4.4:89844369-89844388 | None:intergenic | 20.0% |
| !! | TTTATCATTGATACTAGATA+AGG | + | chr4.4:89841478-89841497 | MS.gene034131:intron | 20.0% |
| !!! | AACAAATATATTTTGGTCAT+AGG | + | chr4.4:89841659-89841678 | MS.gene034131:intron | 20.0% |
| !!! | ACAAATATATTTTGGTCATA+GGG | + | chr4.4:89841660-89841679 | MS.gene034131:intron | 20.0% |
| !!! | ACAATATTCTTTTACTAAGA+TGG | - | chr4.4:89844112-89844131 | None:intergenic | 20.0% |
| !!! | AGTGTTTGGAATATATTAAT+AGG | + | chr4.4:89842814-89842833 | MS.gene034131:intron | 20.0% |
| !!! | CCTTCAATATAATTTTGAAT+TGG | + | chr4.4:89844564-89844583 | MS.gene034131:intron | 20.0% |
| !!! | GAAAATTGTTTTAGTTAACA+TGG | - | chr4.4:89843835-89843854 | None:intergenic | 20.0% |
| !!! | TACTAATTTTCTTTCATGAT+TGG | + | chr4.4:89842787-89842806 | MS.gene034131:intron | 20.0% |
| !!! | TGTTAACTAAAACAATTTTC+AGG | + | chr4.4:89843835-89843854 | MS.gene034131:intron | 20.0% |
| !!! | TTATTTTGCAATACATGTTT+AGG | + | chr4.4:89841400-89841419 | MS.gene034131:intron | 20.0% |
| ! | AAAATTACAACTTCCAACAT+AGG | - | chr4.4:89844412-89844431 | None:intergenic | 25.0% |
| ! | AACAATGTTTGTACATCAAA+TGG | - | chr4.4:89843035-89843054 | None:intergenic | 25.0% |
| ! | AACATACAAATCTTCTATTG+AGG | - | chr4.4:89843009-89843028 | None:intergenic | 25.0% |
| ! | AATATAGAGTTATAAACCAC+AGG | - | chr4.4:89842223-89842242 | None:intergenic | 25.0% |
| ! | AATATCATTCACATCGAAAT+AGG | + | chr4.4:89844257-89844276 | MS.gene034131:intron | 25.0% |
| ! | ATCACAGAAAGAATTTAATC+AGG | - | chr4.4:89844792-89844811 | None:intergenic | 25.0% |
| ! | ATCATCGTATCATAACTAAA+AGG | - | chr4.4:89841261-89841280 | None:intergenic | 25.0% |
| ! | ATTGACAACACTTTATACTA+AGG | - | chr4.4:89841736-89841755 | None:intergenic | 25.0% |
| ! | ATTGGGTATTATTATGAAGA+TGG | + | chr4.4:89843890-89843909 | MS.gene034131:intron | 25.0% |
| ! | CTATGTTTGGTAAAAAATAG+TGG | + | chr4.4:89841423-89841442 | MS.gene034131:intron | 25.0% |
| ! | CTTATGAGAAATGAAATACT+AGG | - | chr4.4:89844370-89844389 | None:intergenic | 25.0% |
| ! | GTTCGATATTAAATTTAGAC+GGG | + | chr4.4:89842742-89842761 | MS.gene034131:intron | 25.0% |
| ! | TATCTCAGACAAATTAAGAT+GGG | + | chr4.4:89843866-89843885 | MS.gene034131:intron | 25.0% |
| ! | TCACAGAAAGAATTTAATCA+GGG | - | chr4.4:89844791-89844810 | None:intergenic | 25.0% |
| ! | TGATTAAAAATAGACTGACA+TGG | + | chr4.4:89844292-89844311 | MS.gene034131:intron | 25.0% |
| ! | TTATATATGCATGGTGAATT+AGG | + | chr4.4:89840959-89840978 | MS.gene034131:CDS | 25.0% |
| ! | TTATTGTTACTCATGTCTAT+GGG | - | chr4.4:89843999-89844018 | None:intergenic | 25.0% |
| ! | TTGCTACATAAACAATATGT+TGG | - | chr4.4:89843802-89843821 | None:intergenic | 25.0% |
| ! | TTGGGTATTATTATGAAGAT+GGG | + | chr4.4:89843891-89843910 | MS.gene034131:intron | 25.0% |
| ! | TTTAATCTTTACCAGTTAAC+TGG | + | chr4.4:89843630-89843649 | MS.gene034131:intron | 25.0% |
| !! | AAAGAATATTGTTGGTAGAT+TGG | + | chr4.4:89844120-89844139 | MS.gene034131:intron | 25.0% |
| !! | AGCATTTTAGATTAATCGAA+TGG | - | chr4.4:89842268-89842287 | None:intergenic | 25.0% |
| !! | AGTTCATCATTAGTTTAACA+TGG | + | chr4.4:89844444-89844463 | MS.gene034131:intron | 25.0% |
| !! | ATTTTACAGACTATGAAAAC+TGG | - | chr4.4:89843150-89843169 | None:intergenic | 25.0% |
| !! | GTTCATCATTAGTTTAACAT+GGG | + | chr4.4:89844445-89844464 | MS.gene034131:intron | 25.0% |
| !! | GTTGAACACTTTATTTGTAT+CGG | - | chr4.4:89841113-89841132 | None:intergenic | 25.0% |
| !! | TGTGCCAAACAAATATATTT+TGG | + | chr4.4:89841652-89841671 | MS.gene034131:intron | 25.0% |
| !! | TTCATCATTAGTTTAACATG+GGG | + | chr4.4:89844446-89844465 | MS.gene034131:intron | 25.0% |
| !!! | AATTTTCAATTTTTCAGCAG+AGG | - | chr4.4:89842617-89842636 | None:intergenic | 25.0% |
| !!! | ACAAGTTTAAGCTTTTTTAC+TGG | - | chr4.4:89841622-89841641 | None:intergenic | 25.0% |
| !!! | AGTATAAAGTGTTGTCAATT+AGG | + | chr4.4:89841737-89841756 | MS.gene034131:intron | 25.0% |
| !!! | CAAATATATTTTGGTCATAG+GGG | + | chr4.4:89841661-89841680 | MS.gene034131:intron | 25.0% |
| !!! | CTCATAGTTGATAAATTAGT+GGG | + | chr4.4:89841523-89841542 | MS.gene034131:intron | 25.0% |
| !!! | GATATTTTGAATTAACTTCG+TGG | + | chr4.4:89842463-89842482 | MS.gene034131:intron | 25.0% |
| !!! | GGCACATTTTGTTTTTTTAA+TGG | + | chr4.4:89842521-89842540 | MS.gene034131:intron | 25.0% |
| !!! | GTATAAAGTGTTGTCAATTA+GGG | + | chr4.4:89841738-89841757 | MS.gene034131:intron | 25.0% |
| !!! | TACTAACATGAAGCTTTATT+AGG | - | chr4.4:89841184-89841203 | None:intergenic | 25.0% |
| !!! | TATAAAGTGTTGTCAATTAG+GGG | + | chr4.4:89841739-89841758 | MS.gene034131:intron | 25.0% |
| AATCAACAAATAGCAAGAGA+TGG | - | chr4.4:89842404-89842423 | None:intergenic | 30.0% | |
| AATTCTTTCTGTGATGCTTT+AGG | + | chr4.4:89844797-89844816 | MS.gene034131:intron | 30.0% | |
| ACTGTTAGGTTATATATGCA+TGG | + | chr4.4:89840950-89840969 | MS.gene034131:CDS | 30.0% | |
| ACTTGATGAATTTCATCATG+AGG | - | chr4.4:89842375-89842394 | None:intergenic | 30.0% | |
| AGACAAATTAAGATGGGTAT+TGG | + | chr4.4:89843872-89843891 | MS.gene034131:intron | 30.0% | |
| ATACATGTTTAGGCTATGTT+TGG | + | chr4.4:89841410-89841429 | MS.gene034131:intron | 30.0% | |
| ATATAGCATAAATCGAAGCA+AGG | - | chr4.4:89844640-89844659 | None:intergenic | 30.0% | |
| ATCATTGTATATTGCATCTC+TGG | + | chr4.4:89841839-89841858 | MS.gene034131:intron | 30.0% | |
| ATCGGATATACTAACTCAAA+AGG | - | chr4.4:89841331-89841350 | None:intergenic | 30.0% | |
| ATTGAAAATTGAGCTGACAA+AGG | + | chr4.4:89842627-89842646 | MS.gene034131:CDS | 30.0% | |
| CAACATAGAGTGGAAATATT+AGG | - | chr4.4:89842565-89842584 | None:intergenic | 30.0% | |
| CAGAATATACTTATAAAGCC+CGG | + | chr4.4:89844946-89844965 | MS.gene034131:CDS | 30.0% | |
| CTTAGAGAGAACAAAACAAT+AGG | - | chr4.4:89844907-89844926 | None:intergenic | 30.0% | |
| CTTCTGAGTTAATAGATCAT+CGG | - | chr4.4:89840642-89840661 | None:intergenic | 30.0% | |
| GAATTTAATCAGGGATCAAA+TGG | - | chr4.4:89844493-89844512 | None:intergenic | 30.0% | |
| GACAAATTAAGATGGGTATT+GGG | + | chr4.4:89843873-89843892 | MS.gene034131:intron | 30.0% | |
| GTATCTCAGACAAATTAAGA+TGG | + | chr4.4:89843865-89843884 | MS.gene034131:intron | 30.0% | |
| GTTATTGTTACTCATGTCTA+TGG | - | chr4.4:89844000-89844019 | None:intergenic | 30.0% | |
| TATTTGAATGTGCTTCTGTT+AGG | + | chr4.4:89843186-89843205 | MS.gene034131:intron | 30.0% | |
| TCGGATATACTAACTCAAAA+GGG | - | chr4.4:89841330-89841349 | None:intergenic | 30.0% | |
| TGATGATAGATGCTTAATCT+TGG | - | chr4.4:89842902-89842921 | None:intergenic | 30.0% | |
| TGTGAACAAAATCTTAACCT+CGG | + | chr4.4:89844541-89844560 | MS.gene034131:intron | 30.0% | |
| TTCCAACATAGGAACTAAAA+TGG | - | chr4.4:89844401-89844420 | None:intergenic | 30.0% | |
| TTTATCTCTCTGAACTTACA+GGG | - | chr4.4:89843656-89843675 | None:intergenic | 30.0% | |
| TTTGCTCAAGATATCATCTT+TGG | - | chr4.4:89840582-89840601 | None:intergenic | 30.0% | |
| ! | AGCTATGATTTTTATGACTC+TGG | - | chr4.4:89843938-89843957 | None:intergenic | 30.0% |
| ! | GAAAAATATAAGTGATGGTG+TGG | + | chr4.4:89841985-89842004 | MS.gene034131:intron | 30.0% |
| ! | GTTTGGTAAAAAATAGTGGA+TGG | + | chr4.4:89841427-89841446 | MS.gene034131:intron | 30.0% |
| ! | TAGTCTGTAAAATTTTCGTC+TGG | + | chr4.4:89843157-89843176 | MS.gene034131:intron | 30.0% |
| ! | TCATAACCAGTGTTGTTAAA+TGG | + | chr4.4:89843288-89843307 | MS.gene034131:intron | 30.0% |
| ! | TCTTTTTATAAAAGCTTCCG+AGG | + | chr4.4:89843542-89843561 | MS.gene034131:intron | 30.0% |
| ! | TTTTATCTCTCTGAACTTAC+AGG | - | chr4.4:89843657-89843676 | None:intergenic | 30.0% |
| ! | TTTTCAACAAGATGCTCTTT+AGG | - | chr4.4:89842078-89842097 | None:intergenic | 30.0% |
| !! | ACAAATTTCTGAGGTTATAG+AGG | - | chr4.4:89841699-89841718 | None:intergenic | 30.0% |
| !! | ATAAATTAGTGGGTTGAATG+GGG | + | chr4.4:89841533-89841552 | MS.gene034131:intron | 30.0% |
| !! | GATAAATTAGTGGGTTGAAT+GGG | + | chr4.4:89841532-89841551 | MS.gene034131:intron | 30.0% |
| !! | GCTCATAGTTGATAAATTAG+TGG | + | chr4.4:89841522-89841541 | MS.gene034131:intron | 30.0% |
| !! | TAAAGAGCATCTTGTTGAAA+AGG | + | chr4.4:89842077-89842096 | MS.gene034131:CDS | 30.0% |
| !! | TGATAAATTAGTGGGTTGAA+TGG | + | chr4.4:89841531-89841550 | MS.gene034131:intron | 30.0% |
| !! | TGTTTTGTTCTCTCTAAGTT+AGG | + | chr4.4:89844909-89844928 | MS.gene034131:CDS | 30.0% |
| !! | TTGCTATTTGTTGATTGCTT+TGG | + | chr4.4:89842408-89842427 | MS.gene034131:intron | 30.0% |
| !!! | GATTTTTTGACAACCACTAT+AGG | + | chr4.4:89843324-89843343 | MS.gene034131:intron | 30.0% |
| !!! | GTGTTTATATGACGGATTTT+TGG | + | chr4.4:89843373-89843392 | MS.gene034131:intron | 30.0% |
| AAAACAATAGGAATCCCAGT+CGG | - | chr4.4:89844895-89844914 | None:intergenic | 35.0% | |
| AAATATTCTGCAAAGGAGAC+TGG | + | chr4.4:89843439-89843458 | MS.gene034131:intron | 35.0% | |
| AAATTGAGACCTCAAGTGAA+AGG | + | chr4.4:89840995-89841014 | MS.gene034131:CDS | 35.0% | |
| AATAGTAATACTAGCCAGAC+CGG | - | chr4.4:89844764-89844783 | None:intergenic | 35.0% | |
| AATATTCTGCAAAGGAGACT+GGG | + | chr4.4:89843440-89843459 | MS.gene034131:intron | 35.0% | |
| AATTCATGTGACTAGTGATG+AGG | - | chr4.4:89844689-89844708 | None:intergenic | 35.0% | |
| ACATAGGAACTAAAATGGAG+TGG | - | chr4.4:89844396-89844415 | None:intergenic | 35.0% | |
| ACTGACATGGCTTAATAGAT+GGG | + | chr4.4:89844305-89844324 | MS.gene034131:intron | 35.0% | |
| ATAGATGGGAATGTGTTTAC+AGG | + | chr4.4:89844319-89844338 | MS.gene034131:intron | 35.0% | |
| ATAGGTCCACTATTGTTTAG+TGG | + | chr4.4:89841764-89841783 | MS.gene034131:intron | 35.0% | |
| ATATTCAGTGATGTCAATCG+CGG | - | chr4.4:89841819-89841838 | None:intergenic | 35.0% | |
| ATCATCAGTTCTACACAAGA+AGG | + | chr4.4:89842915-89842934 | MS.gene034131:CDS | 35.0% | |
| ATCTCAATCTCAATCTCACT+TGG | + | chr4.4:89843752-89843771 | MS.gene034131:intron | 35.0% | |
| ATTCATGTGACTAGTGATGA+GGG | - | chr4.4:89844688-89844707 | None:intergenic | 35.0% | |
| ATTGATATGTTGTCCCTGAT+TGG | + | chr4.4:89842024-89842043 | MS.gene034131:CDS | 35.0% | |
| ATTGTTTATGTAGCAAGCTC+TGG | + | chr4.4:89843806-89843825 | MS.gene034131:intron | 35.0% | |
| CAAAATTATATTGAAGGCCG+AGG | - | chr4.4:89844561-89844580 | None:intergenic | 35.0% | |
| CAATTGTAGCTATCAGATGA+AGG | - | chr4.4:89842181-89842200 | None:intergenic | 35.0% | |
| CCAATTCCACTAAACAATAG+TGG | - | chr4.4:89841773-89841792 | None:intergenic | 35.0% | |
| CCACTATTGTTTAGTGGAAT+TGG | + | chr4.4:89841770-89841789 | MS.gene034131:intron | 35.0% | |
| CTCAAGTGAAAGGAAAAGAT+TGG | + | chr4.4:89841005-89841024 | MS.gene034131:CDS | 35.0% | |
| CTTTATACTAAGGCTCTGTT+TGG | - | chr4.4:89841726-89841745 | None:intergenic | 35.0% | |
| GATTGAGATTGAGATTGAGA+TGG | - | chr4.4:89843747-89843766 | None:intergenic | 35.0% | |
| GTTAATAGATCATCGGAATC+AGG | - | chr4.4:89840635-89840654 | None:intergenic | 35.0% | |
| TACATATCCTGAAACGAGAT+TGG | - | chr4.4:89840668-89840687 | None:intergenic | 35.0% | |
| TATTCATTGCACACTAGGAT+GGG | - | chr4.4:89844664-89844683 | None:intergenic | 35.0% | |
| TCTAGTAGTGTTTGAGCTTA+TGG | - | chr4.4:89841573-89841592 | None:intergenic | 35.0% | |
| TCTTTGACTGGGAGTAATTA+AGG | - | chr4.4:89844721-89844740 | None:intergenic | 35.0% | |
| TGATAAAGTTCATTCGCTGT+CGG | - | chr4.4:89841465-89841484 | None:intergenic | 35.0% | |
| TGATAGCAATGGTTCAAAAG+AGG | + | chr4.4:89844841-89844860 | MS.gene034131:CDS | 35.0% | |
| TTAATTACTCCCAGTCAAAG+AGG | + | chr4.4:89844720-89844739 | MS.gene034131:intron | 35.0% | |
| TTTATAAAGCTCTTGCCAAG+TGG | + | chr4.4:89841917-89841936 | MS.gene034131:intron | 35.0% | |
| TTTCCGTAATTGAGAGTTGT+AGG | + | chr4.4:89842434-89842453 | MS.gene034131:intron | 35.0% | |
| TTTGGCAAGACAAATTTCTG+AGG | - | chr4.4:89841708-89841727 | None:intergenic | 35.0% | |
| ! | ACTATAGGCATTTTGTGAAG+GGG | + | chr4.4:89843339-89843358 | MS.gene034131:intron | 35.0% |
| ! | ATCATTAGTTTAACATGGGG+TGG | + | chr4.4:89844449-89844468 | MS.gene034131:intron | 35.0% |
| ! | CAATCTTTTCCTTTCACTTG+AGG | - | chr4.4:89841007-89841026 | None:intergenic | 35.0% |
| ! | CACTATAGGCATTTTGTGAA+GGG | + | chr4.4:89843338-89843357 | MS.gene034131:intron | 35.0% |
| ! | CATTTCATCTTCCTCTAAAG+AGG | + | chr4.4:89841301-89841320 | MS.gene034131:intron | 35.0% |
| ! | CGGGCTTTATAAGTATATTC+TGG | - | chr4.4:89844948-89844967 | None:intergenic | 35.0% |
| ! | TATTTTGCTTCACATGTCGA+TGG | + | chr4.4:89842495-89842514 | MS.gene034131:intron | 35.0% |
| !! | GTTAAATGGCATTGGTTTAG+CGG | + | chr4.4:89843302-89843321 | MS.gene034131:intron | 35.0% |
| !! | TCTGACTTGTTGTAAGGATT+CGG | - | chr4.4:89840489-89840508 | None:intergenic | 35.0% |
| !!! | CTCCATTTTAGTTCCTATGT+TGG | + | chr4.4:89844396-89844415 | MS.gene034131:intron | 35.0% |
| !!! | TTTTTTAACACCCTACCGTA+TGG | + | chr4.4:89843258-89843277 | MS.gene034131:intron | 35.0% |
| AGCAATCTTTCCTCTTTGAC+TGG | - | chr4.4:89844733-89844752 | None:intergenic | 40.0% | |
| AGCACCTCAACAATTCAAGA+AGG | - | chr4.4:89842156-89842175 | None:intergenic | 40.0% | |
| ATATTGCATCTCTGGTCATG+TGG | + | chr4.4:89841847-89841866 | MS.gene034131:intron | 40.0% | |
| ATTGGACTTGATGTGATTCG+TGG | + | chr4.4:89840761-89840780 | MS.gene034131:CDS | 40.0% | |
| CAAAAGGGTTTCCTCTTTAG+AGG | - | chr4.4:89841315-89841334 | None:intergenic | 40.0% | |
| CCAATCATGATCGTGCATTA+TGG | - | chr4.4:89843467-89843486 | None:intergenic | 40.0% | |
| CCAATGTTGTTAATGGCAGA+TGG | - | chr4.4:89843399-89843418 | None:intergenic | 40.0% | |
| CCATAATGCACGATCATGAT+TGG | + | chr4.4:89843464-89843483 | MS.gene034131:intron | 40.0% | |
| CCATCTGCCATTAACAACAT+TGG | + | chr4.4:89843396-89843415 | MS.gene034131:intron | 40.0% | |
| CCTTCACAAAATGCCTATAG+TGG | - | chr4.4:89843340-89843359 | None:intergenic | 40.0% | |
| CTAGATAAGGTAGCTGATAG+CGG | + | chr4.4:89841491-89841510 | MS.gene034131:intron | 40.0% | |
| CTATTCATTGCACACTAGGA+TGG | - | chr4.4:89844665-89844684 | None:intergenic | 40.0% | |
| CTGTCCTTCTTGAATTGTTG+AGG | + | chr4.4:89842149-89842168 | MS.gene034131:intron | 40.0% | |
| GAAAGATTGCTACATAGCTC+CGG | + | chr4.4:89844742-89844761 | MS.gene034131:intron | 40.0% | |
| GACTGACATGGCTTAATAGA+TGG | + | chr4.4:89844304-89844323 | MS.gene034131:intron | 40.0% | |
| GAGATTGAGATGGTAGACAA+CGG | - | chr4.4:89843737-89843756 | None:intergenic | 40.0% | |
| GATAAAGTTCATTCGCTGTC+GGG | - | chr4.4:89841464-89841483 | None:intergenic | 40.0% | |
| GATACGTCGAAAACTACCAT+CGG | + | chr4.4:89840725-89840744 | MS.gene034131:CDS | 40.0% | |
| GATGATAGACTAGAGAAGCT+TGG | + | chr4.4:89841278-89841297 | MS.gene034131:intron | 40.0% | |
| GATGTTTGGGAAGGAGATAA+GGG | + | chr4.4:89840889-89840908 | MS.gene034131:CDS | 40.0% | |
| GCAATCTTTCCTCTTTGACT+GGG | - | chr4.4:89844732-89844751 | None:intergenic | 40.0% | |
| GCAGTGGTGTGTTTATATGA+CGG | + | chr4.4:89843365-89843384 | MS.gene034131:intron | 40.0% | |
| GGTGTGACCAATGTTGTTAA+TGG | - | chr4.4:89843406-89843425 | None:intergenic | 40.0% | |
| GTACTGGAATCAACATAGAG+TGG | - | chr4.4:89842575-89842594 | None:intergenic | 40.0% | |
| GTCATATAAACACACCACTG+CGG | - | chr4.4:89843366-89843385 | None:intergenic | 40.0% | |
| GTTGAAATTTAGCCGTTCCA+GGG | + | chr4.4:89843683-89843702 | MS.gene034131:intron | 40.0% | |
| GTTGAAGAAAGTGAGGGAAA+TGG | + | chr4.4:89841054-89841073 | MS.gene034131:CDS | 40.0% | |
| TAGCCAAGGTGAATGATTCA+GGG | + | chr4.4:89840918-89840937 | MS.gene034131:CDS | 40.0% | |
| TATACTTATAAAGCCCGGAC+TGG | + | chr4.4:89844951-89844970 | MS.gene034131:CDS | 40.0% | |
| TCAACAAGATGCTCTTTAGG+AGG | - | chr4.4:89842075-89842094 | None:intergenic | 40.0% | |
| TCATGATTGGATCGAGTGTT+TGG | + | chr4.4:89842800-89842819 | MS.gene034131:intron | 40.0% | |
| TGAATGTGCTTCTGTTAGGT+AGG | + | chr4.4:89843190-89843209 | MS.gene034131:intron | 40.0% | |
| TGAATTAACTTCGTGGTGTC+TGG | + | chr4.4:89842470-89842489 | MS.gene034131:intron | 40.0% | |
| TGACTGGGAGTAATTAAGGA+CGG | - | chr4.4:89844717-89844736 | None:intergenic | 40.0% | |
| TGAGAGGTTGAAGAAAGTGA+GGG | + | chr4.4:89841048-89841067 | MS.gene034131:CDS | 40.0% | |
| TGGTAGATTGGATGAAAGCT+GGG | + | chr4.4:89844132-89844151 | MS.gene034131:intron | 40.0% | |
| TGTTACCGGATTCGATGTTT+GGG | + | chr4.4:89840876-89840895 | MS.gene034131:CDS | 40.0% | |
| TGTTGAAATTTAGCCGTTCC+AGG | + | chr4.4:89843682-89843701 | MS.gene034131:intron | 40.0% | |
| TGTTGTCAATTAGGGGCTAT+AGG | + | chr4.4:89841746-89841765 | MS.gene034131:intron | 40.0% | |
| TTAGCCAAGGTGAATGATTC+AGG | + | chr4.4:89840917-89840936 | MS.gene034131:CDS | 40.0% | |
| TTGGTAGATTGGATGAAAGC+TGG | + | chr4.4:89844131-89844150 | MS.gene034131:intron | 40.0% | |
| TTGTTACCGGATTCGATGTT+TGG | + | chr4.4:89840875-89840894 | MS.gene034131:CDS | 40.0% | |
| TTGTTGTAAGGATTCGGAGA+AGG | - | chr4.4:89840483-89840502 | None:intergenic | 40.0% | |
| ! | CCAATGCCATTTAACAACAC+TGG | - | chr4.4:89843297-89843316 | None:intergenic | 40.0% |
| ! | CCACTATAGGCATTTTGTGA+AGG | + | chr4.4:89843337-89843356 | MS.gene034131:intron | 40.0% |
| ! | CCAGTGTTGTTAAATGGCAT+TGG | + | chr4.4:89843294-89843313 | MS.gene034131:intron | 40.0% |
| ! | CTATAGGCATTTTGTGAAGG+GGG | + | chr4.4:89843340-89843359 | MS.gene034131:intron | 40.0% |
| ! | GTGAATGATTCAGGGAGTTT+TGG | + | chr4.4:89840926-89840945 | MS.gene034131:CDS | 40.0% |
| ! | TGTTATCTGGGTGAAAGTAC+TGG | - | chr4.4:89842591-89842610 | None:intergenic | 40.0% |
| !! | TGAGCTTCTGACTTGTTGTA+AGG | - | chr4.4:89840495-89840514 | None:intergenic | 40.0% |
| !! | TGCTTTAGGATGTGCATTCT+CGG | + | chr4.4:89844811-89844830 | MS.gene034131:intron | 40.0% |
| !! | TTGGATTCGTTTTGTTGCGA+GGG | - | chr4.4:89840563-89840582 | None:intergenic | 40.0% |
| !! | TTTGGATTCGTTTTGTTGCG+AGG | - | chr4.4:89840564-89840583 | None:intergenic | 40.0% |
| !!! | TGGGTTTTGTGGTTTTGAGA+CGG | - | chr4.4:89840382-89840401 | None:intergenic | 40.0% |
| AAAAGCTTCCGAGGAATGCT+AGG | + | chr4.4:89843551-89843570 | MS.gene034131:intron | 45.0% | |
| AAAGCTTCCGAGGAATGCTA+GGG | + | chr4.4:89843552-89843571 | MS.gene034131:intron | 45.0% | |
| AAATTCGACGAATCAGACGC+CGG | + | chr4.4:89840802-89840821 | MS.gene034131:CDS | 45.0% | |
| AACGTCAAAGTCAAAGCCTG+TGG | + | chr4.4:89842204-89842223 | MS.gene034131:intron | 45.0% | |
| AACTTACAGGGCCAGTTAAC+TGG | - | chr4.4:89843644-89843663 | None:intergenic | 45.0% | |
| AAGATGTCCGAGTCAGATTG+TGG | + | chr4.4:89842664-89842683 | MS.gene034131:CDS | 45.0% | |
| AATACCTCAGAAGAACCGAC+TGG | + | chr4.4:89844877-89844896 | MS.gene034131:CDS | 45.0% | |
| AATATGTCAGCGGGGAATAG+TGG | + | chr4.4:89840845-89840864 | MS.gene034131:CDS | 45.0% | |
| ACTCCCTGAATCATTCACCT+TGG | - | chr4.4:89840924-89840943 | None:intergenic | 45.0% | |
| AGATGGTAGACAACGGAAAG+CGG | - | chr4.4:89843730-89843749 | None:intergenic | 45.0% | |
| AGGGCTATTCATTGCACACT+AGG | - | chr4.4:89844669-89844688 | None:intergenic | 45.0% | |
| AGGGTTGTGGTCATGTTGTA+AGG | + | chr4.4:89841940-89841959 | MS.gene034131:intron | 45.0% | |
| ATAAAGCTCTTGCCAAGTGG+AGG | + | chr4.4:89841920-89841939 | MS.gene034131:intron | 45.0% | |
| ATACCTCAGAAGAACCGACT+GGG | + | chr4.4:89844878-89844897 | MS.gene034131:CDS | 45.0% | |
| ATATGTCAGCGGGGAATAGT+GGG | + | chr4.4:89840846-89840865 | MS.gene034131:CDS | 45.0% | |
| CAGCAGAGGACATGTTATCT+GGG | - | chr4.4:89842603-89842622 | None:intergenic | 45.0% | |
| CGATGTTTGGGAAGGAGATA+AGG | + | chr4.4:89840888-89840907 | MS.gene034131:CDS | 45.0% | |
| CGGCCTACAACTCTCAATTA+CGG | - | chr4.4:89842440-89842459 | None:intergenic | 45.0% | |
| CTATTCCCCGCTGACATATT+TGG | - | chr4.4:89840845-89840864 | None:intergenic | 45.0% | |
| CTGGAGATGGTGAGTATAGA+AGG | + | chr4.4:89844225-89844244 | MS.gene034131:intron | 45.0% | |
| CTTCAACCTCTCACTCAACT+CGG | - | chr4.4:89841041-89841060 | None:intergenic | 45.0% | |
| GAAGAAGCCAATCTCGTTTC+AGG | + | chr4.4:89840658-89840677 | MS.gene034131:CDS | 45.0% | |
| GACATATTTGGTCTCCACCT+CGG | - | chr4.4:89840833-89840852 | None:intergenic | 45.0% | |
| GATATGTTGTCCCTGATTGG+TGG | + | chr4.4:89842027-89842046 | MS.gene034131:CDS | 45.0% | |
| GGTAGATTGGATGAAAGCTG+GGG | + | chr4.4:89844133-89844152 | MS.gene034131:intron | 45.0% | |
| GGTTATGATGACTCGCCATA+CGG | - | chr4.4:89843276-89843295 | None:intergenic | 45.0% | |
| GTGAGAGGTTGAAGAAAGTG+AGG | + | chr4.4:89841047-89841066 | MS.gene034131:CDS | 45.0% | |
| GTGGAGACCAAATATGTCAG+CGG | + | chr4.4:89840835-89840854 | MS.gene034131:CDS | 45.0% | |
| TAAAGCTCTTGCCAAGTGGA+GGG | + | chr4.4:89841921-89841940 | MS.gene034131:intron | 45.0% | |
| TAGATCATCGGAATCAGGTG+CGG | - | chr4.4:89840630-89840649 | None:intergenic | 45.0% | |
| TAGGATGTGCATTCTCGGAA+AGG | + | chr4.4:89844816-89844835 | MS.gene034131:intron | 45.0% | |
| TCAGCAGAGGACATGTTATC+TGG | - | chr4.4:89842604-89842623 | None:intergenic | 45.0% | |
| TCCTTCCCAAACATCGAATC+CGG | - | chr4.4:89840884-89840903 | None:intergenic | 45.0% | |
| TCGATCCAAAGATTCCGCTT+CGG | + | chr4.4:89840703-89840722 | MS.gene034131:CDS | 45.0% | |
| TCGGAAAGGTCTGATAGCAA+TGG | + | chr4.4:89844830-89844849 | MS.gene034131:CDS | 45.0% | |
| TCTGCTCGTGTTCAAGGTAA+AGG | + | chr4.4:89842688-89842707 | MS.gene034131:intron | 45.0% | |
| TGCTTCACATGTCGATGGAT+AGG | + | chr4.4:89842500-89842519 | MS.gene034131:intron | 45.0% | |
| TGGAGACCAAATATGTCAGC+GGG | + | chr4.4:89840836-89840855 | MS.gene034131:CDS | 45.0% | |
| TGTAAGGATTCGGAGAAGGA+GGG | - | chr4.4:89840479-89840498 | None:intergenic | 45.0% | |
| TGTATGACCCTAGCATTCCT+CGG | - | chr4.4:89843562-89843581 | None:intergenic | 45.0% | |
| TTGGGAAGGAGATAAGGGAT+AGG | + | chr4.4:89840894-89840913 | MS.gene034131:CDS | 45.0% | |
| TTGTAAGGATTCGGAGAAGG+AGG | - | chr4.4:89840480-89840499 | None:intergenic | 45.0% | |
| ! | AGTTTTCGACGTATCCGAAG+CGG | - | chr4.4:89840720-89840739 | None:intergenic | 45.0% |
| ! | GATAAGGGATAGGTTAGCCA+AGG | + | chr4.4:89840904-89840923 | MS.gene034131:CDS | 45.0% |
| ! | GTTTATGTAGCAAGCTCTGG+TGG | + | chr4.4:89843809-89843828 | MS.gene034131:intron | 45.0% |
| ! | TTGCAAGAGCAGGACAGTTT+TGG | + | chr4.4:89844196-89844215 | MS.gene034131:intron | 45.0% |
| !! | AGAGTAGGGTTTGGGTTTTG+TGG | - | chr4.4:89840393-89840412 | None:intergenic | 45.0% |
| !! | CAGGGAGTTTTGGTACTGTT+AGG | + | chr4.4:89840936-89840955 | MS.gene034131:CDS | 45.0% |
| !! | GAAGGTGTTGTGTTTGACGT+TGG | - | chr4.4:89840530-89840549 | None:intergenic | 45.0% |
| !! | TAAAGCCCGGACTGGTAAAT+CGG | + | chr4.4:89844959-89844978 | MS.gene034131:CDS | 45.0% |
| !! | TAGTGGGACGAGTTTGTTAC+CGG | + | chr4.4:89840862-89840881 | MS.gene034131:CDS | 45.0% |
| !!! | TGGTTTTGGAACGGAAGCTT+TGG | - | chr4.4:89840607-89840626 | None:intergenic | 45.0% |
| ACCGGATTCGATGTTTGGGA+AGG | + | chr4.4:89840880-89840899 | MS.gene034131:CDS | 50.0% | |
| ACGTCGAAAACTACCATCGG+TGG | + | chr4.4:89840728-89840747 | MS.gene034131:CDS | 50.0% | |
| AGCAGAGCCACAATCTGACT+CGG | - | chr4.4:89842674-89842693 | None:intergenic | 50.0% | |
| AGCTTGGAGTTCCACCAATC+AGG | - | chr4.4:89842041-89842060 | None:intergenic | 50.0% | |
| ATGATGACTCGCCATACGGT+AGG | - | chr4.4:89843272-89843291 | None:intergenic | 50.0% | |
| ATTGCTACATAGCTCCGGTC+TGG | + | chr4.4:89844747-89844766 | MS.gene034131:intron | 50.0% | |
| CCAAGAGAACTTGCAAGAGC+AGG | + | chr4.4:89844186-89844205 | MS.gene034131:intron | 50.0% | |
| CCTGCTCTTGCAAGTTCTCT+TGG | - | chr4.4:89844189-89844208 | None:intergenic | 50.0% | |
| CGTATCCGAAGCGGAATCTT+TGG | - | chr4.4:89840711-89840730 | None:intergenic | 50.0% | |
| GATGGTAGACAACGGAAAGC+GGG | - | chr4.4:89843729-89843748 | None:intergenic | 50.0% | |
| GCGTCGCTATTCGACAACAT+CGG | - | chr4.4:89841349-89841368 | None:intergenic | 50.0% | |
| GCTTGGAGTTCCACCAATCA+GGG | - | chr4.4:89842040-89842059 | None:intergenic | 50.0% | |
| GGAGACCAAATATGTCAGCG+GGG | + | chr4.4:89840837-89840856 | MS.gene034131:CDS | 50.0% | |
| GGGGTGGACAATGTAATCTG+CGG | + | chr4.4:89844465-89844484 | MS.gene034131:intron | 50.0% | |
| TCCAACTCCGGTGACAATGA+CGG | + | chr4.4:89840440-89840459 | MS.gene034131:CDS | 50.0% | |
| TCGAAAACTACCATCGGTGG+TGG | + | chr4.4:89840731-89840750 | MS.gene034131:CDS | 50.0% | |
| TGATGACTCGCCATACGGTA+GGG | - | chr4.4:89843271-89843290 | None:intergenic | 50.0% | |
| ! | AAAACTACCATCGGTGGTGG+TGG | + | chr4.4:89840734-89840753 | MS.gene034131:CDS | 50.0% |
| ! | AAACTACCATCGGTGGTGGT+GGG | + | chr4.4:89840735-89840754 | MS.gene034131:CDS | 50.0% |
| ! | AATCCCAGTCGGTTCTTCTG+AGG | - | chr4.4:89844884-89844903 | None:intergenic | 50.0% |
| ! | AGTGGTGGAGAGTAGGGTTT+GGG | - | chr4.4:89840401-89840420 | None:intergenic | 50.0% |
| ! | GGAGGCTTTGACAAGTAGCT+TGG | - | chr4.4:89842057-89842076 | None:intergenic | 50.0% |
| ! | TGATGGAGTGGTGGAGAGTA+GGG | - | chr4.4:89840407-89840426 | None:intergenic | 50.0% |
| ! | TTTTGTTGCGAGGGAGAGAG+AGG | - | chr4.4:89840554-89840573 | None:intergenic | 50.0% |
| !! | AAAGCCCGGACTGGTAAATC+GGG | + | chr4.4:89844960-89844979 | MS.gene034131:CDS | 50.0% |
| !! | AGGACAGTTTTGGTGGAGAC+TGG | + | chr4.4:89844206-89844225 | MS.gene034131:intron | 50.0% |
| !! | CAAGAGCAGGACAGTTTTGG+TGG | + | chr4.4:89844199-89844218 | MS.gene034131:intron | 50.0% |
| !! | GTTTTGGTGGAGACTGGAGA+TGG | + | chr4.4:89844212-89844231 | MS.gene034131:intron | 50.0% |
| AACTCCGGTGACAATGACGG+TGG | + | chr4.4:89840443-89840462 | MS.gene034131:CDS | 55.0% | |
| ACCGTCATTGTCACCGGAGT+TGG | - | chr4.4:89840444-89840463 | None:intergenic | 55.0% | |
| ATCATCGGAATCAGGTGCGG+TGG | - | chr4.4:89840627-89840646 | None:intergenic | 55.0% | |
| ATTGTCACCGGAGTTGGAGG+TGG | - | chr4.4:89840438-89840457 | None:intergenic | 55.0% | |
| CATGACCACAACCCTCCACT+TGG | - | chr4.4:89841935-89841954 | None:intergenic | 55.0% | |
| CGTCACCCGATTTACCAGTC+CGG | - | chr4.4:89844968-89844987 | None:intergenic | 55.0% | |
| CTCTTCTCCACCTCCAACTC+CGG | + | chr4.4:89840428-89840447 | MS.gene034131:CDS | 55.0% | |
| GTCACCCGATTTACCAGTCC+GGG | - | chr4.4:89844967-89844986 | None:intergenic | 55.0% | |
| GTCATTGTCACCGGAGTTGG+AGG | - | chr4.4:89840441-89840460 | None:intergenic | 55.0% | |
| GTGATGTCAATCGCGGATCG+CGG | - | chr4.4:89841812-89841831 | None:intergenic | 55.0% | |
| GTGGAGATGAGACCCTGGAA+CGG | - | chr4.4:89843698-89843717 | None:intergenic | 55.0% | |
| TCTTGCCAAGTGGAGGGTTG+TGG | + | chr4.4:89841927-89841946 | MS.gene034131:intron | 55.0% | |
| TGGAGGTGGAGAAGAGGTGA+TGG | - | chr4.4:89840424-89840443 | None:intergenic | 55.0% | |
| ! | AACTACCATCGGTGGTGGTG+GGG | + | chr4.4:89840736-89840755 | MS.gene034131:CDS | 55.0% |
| ! | CGATTGCCGAGTTGAGTGAG+AGG | + | chr4.4:89841032-89841051 | MS.gene034131:CDS | 55.0% |
| ! | GAGTGGTGGAGAGTAGGGTT+TGG | - | chr4.4:89840402-89840421 | None:intergenic | 55.0% |
| ! | GGAATCAGGTGCGGTGGTTT+TGG | - | chr4.4:89840621-89840640 | None:intergenic | 55.0% |
| ! | GTGATGGAGTGGTGGAGAGT+AGG | - | chr4.4:89840408-89840427 | None:intergenic | 55.0% |
| ! | TGTGGCTCTGCTCGTGTTCA+AGG | + | chr4.4:89842682-89842701 | MS.gene034131:CDS | 55.0% |
| !! | GAGAAGAGGTGATGGAGTGG+TGG | - | chr4.4:89840416-89840435 | None:intergenic | 55.0% |
| !! | GTGGAGAAGAGGTGATGGAG+TGG | - | chr4.4:89840419-89840438 | None:intergenic | 55.0% |
| !!! | CAGGTGCGGTGGTTTTGGAA+CGG | - | chr4.4:89840616-89840635 | None:intergenic | 55.0% |
| AATACCCCCACCACCACCGA+TGG | - | chr4.4:89840744-89840763 | None:intergenic | 60.0% | |
| CGGAGTTGGAGGTGGAGAAG+AGG | - | chr4.4:89840430-89840449 | None:intergenic | 60.0% | |
| GTCGCCACCGTCATTGTCAC+CGG | - | chr4.4:89840450-89840469 | None:intergenic | 60.0% | |
| GTGTCGTGGAGATGAGACCC+TGG | - | chr4.4:89843703-89843722 | None:intergenic | 60.0% | |
| TGCGAGGGAGAGAGAGGAGA+AGG | - | chr4.4:89840548-89840567 | None:intergenic | 60.0% | |
| ! | TTTTGTGAAGGGGGCCGCAG+TGG | + | chr4.4:89843349-89843368 | MS.gene034131:intron | 60.0% |
| !! | ACTACCATCGGTGGTGGTGG+GGG | + | chr4.4:89840737-89840756 | MS.gene034131:CDS | 60.0% |
| !! | ATCGGTGGTGGTGGGGGTAT+TGG | + | chr4.4:89840743-89840762 | MS.gene034131:CDS | 60.0% |
| ATCAGACGCCGGTGACGCCG+AGG | + | chr4.4:89840813-89840832 | MS.gene034131:CDS | 70.0% | |
| GGTCTCCACCTCGGCGTCAC+CGG | - | chr4.4:89840824-89840843 | None:intergenic | 70.0% | |
| ! | CGGAAAGCGGGCTCGTGTCG+TGG | - | chr4.4:89843717-89843736 | None:intergenic | 70.0% |
| AGACGCCGGTGACGCCGAGG+TGG | + | chr4.4:89840816-89840835 | MS.gene034131:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 89840365 | 89844998 | 89840365 | ID=MS.gene034131 |
| chr4.4 | mRNA | 89840365 | 89844998 | 89840365 | ID=MS.gene034131.t1;Parent=MS.gene034131 |
| chr4.4 | exon | 89840365 | 89841196 | 89840365 | ID=MS.gene034131.t1.exon1;Parent=MS.gene034131.t1 |
| chr4.4 | CDS | 89840365 | 89841196 | 89840365 | ID=cds.MS.gene034131.t1;Parent=MS.gene034131.t1 |
| chr4.4 | exon | 89842016 | 89842098 | 89842016 | ID=MS.gene034131.t1.exon2;Parent=MS.gene034131.t1 |
| chr4.4 | CDS | 89842016 | 89842098 | 89842016 | ID=cds.MS.gene034131.t1;Parent=MS.gene034131.t1 |
| chr4.4 | exon | 89842592 | 89842703 | 89842592 | ID=MS.gene034131.t1.exon3;Parent=MS.gene034131.t1 |
| chr4.4 | CDS | 89842592 | 89842703 | 89842592 | ID=cds.MS.gene034131.t1;Parent=MS.gene034131.t1 |
| chr4.4 | exon | 89842884 | 89842936 | 89842884 | ID=MS.gene034131.t1.exon4;Parent=MS.gene034131.t1 |
| chr4.4 | CDS | 89842884 | 89842936 | 89842884 | ID=cds.MS.gene034131.t1;Parent=MS.gene034131.t1 |
| chr4.4 | exon | 89844819 | 89844998 | 89844819 | ID=MS.gene034131.t1.exon5;Parent=MS.gene034131.t1 |
| chr4.4 | CDS | 89844819 | 89844998 | 89844819 | ID=cds.MS.gene034131.t1;Parent=MS.gene034131.t1 |
| Gene Sequence |
| Protein sequence |
