Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035259.t1 | RHN64189.1 | 97.4 | 951 | 17 | 3 | 1 | 951 | 1 | 943 | 0.00E+00 | 1817 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035259.t1 | Q42736 | 84.1 | 885 | 139 | 1 | 66 | 948 | 69 | 953 | 0.0e+00 | 1508.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035259.t1 | A0A396IF27 | 97.4 | 951 | 17 | 3 | 1 | 951 | 1 | 943 | 0.0e+00 | 1817.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035259.t1 | MTR_4g118350 | 90.750 | 627 | 55 | 2 | 1 | 627 | 1 | 624 | 0.0 | 1161 |
| MS.gene035259.t1 | MTR_4g118355 | 91.781 | 292 | 24 | 0 | 657 | 948 | 1 | 292 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 18 | 952 | 0.0 | 1529 |
| MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 18 | 952 | 0.0 | 1529 |
| MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 25 | 959 | 0.0 | 1529 |
| MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 25 | 959 | 0.0 | 1529 |
| MS.gene035259.t1 | AT4G15530 | 82.644 | 870 | 150 | 1 | 79 | 948 | 3 | 871 | 0.0 | 1520 |
| MS.gene035259.t1 | AT4G15530 | 82.670 | 854 | 147 | 1 | 95 | 948 | 1 | 853 | 0.0 | 1490 |
| MS.gene035259.t1 | AT4G15530 | 82.670 | 854 | 147 | 1 | 95 | 948 | 1 | 853 | 0.0 | 1490 |
Find 244 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATGGTGTTTGGTAATA+TGG | 0.138638 | 8.1:-9347056 | MS.gene035259:CDS |
| GCTAATTCTAGTTGCTTCTT+TGG | 0.182850 | 8.1:+9347178 | None:intergenic |
| TGAGTTGACCCACACCTTTC+TGG | 0.196040 | 8.1:+9342744 | None:intergenic |
| TGGTAAGTTACCTTCAAATT+TGG | 0.225158 | 8.1:+9342686 | None:intergenic |
| ACTGGGGAAAAGAAACTTTA+TGG | 0.240216 | 8.1:-9346989 | MS.gene035259:CDS |
| TGATGATAGGTGGTTGTAAT+TGG | 0.242997 | 8.1:-9345051 | MS.gene035259:intron |
| TATGACTATGCCTCTTACTA+TGG | 0.274466 | 8.1:+9350912 | None:intergenic |
| TTGCATGCCGGATGCTTATA+AGG | 0.282445 | 8.1:-9346725 | MS.gene035259:CDS |
| GACATCAAGTGAGTTTAATA+AGG | 0.284688 | 8.1:-9343460 | MS.gene035259:CDS |
| ACTTTGTCCTTGTACTTAGA+TGG | 0.289385 | 8.1:+9346030 | None:intergenic |
| CACCATGGATTGAATGTTTA+CGG | 0.295707 | 8.1:+9347069 | None:intergenic |
| TACTGTAACCAAATGTCATT+TGG | 0.303402 | 8.1:+9343163 | None:intergenic |
| AATGAAATGGAGGCCTTTCT+TGG | 0.307194 | 8.1:-9348493 | MS.gene035259:CDS |
| TTCATGGTCTCTAAATCTTC+AGG | 0.312014 | 8.1:+9346751 | None:intergenic |
| ATGTCTCATGTTCACCATTC+AGG | 0.321813 | 8.1:-9342483 | MS.gene035259:intron |
| ATACAGAGAGTGTTCACTTT+TGG | 0.324769 | 8.1:-9348871 | MS.gene035259:intron |
| ACACATCAACATCAGATAAT+AGG | 0.326515 | 8.1:-9350885 | MS.gene035259:CDS |
| ATTTGGGAACTTTCATGTCT+TGG | 0.328110 | 8.1:-9344927 | MS.gene035259:CDS |
| ATAGTTTGGGCACGGATTAA+AGG | 0.328392 | 8.1:+9350739 | None:intergenic |
| TGTCTTGGGCTGATGAAATA+AGG | 0.330420 | 8.1:-9344912 | MS.gene035259:CDS |
| ATGGACACAGTTCTTAATCT+TGG | 0.333394 | 8.1:-9347730 | MS.gene035259:CDS |
| TTGTTGGAGTAAGGATAGTT+TGG | 0.334518 | 8.1:+9350725 | None:intergenic |
| GGTAATATGGGAAATACTTC+AGG | 0.336156 | 8.1:-9347043 | MS.gene035259:CDS |
| TCTAACAACCGGATTGTTAC+TGG | 0.340369 | 8.1:+9344399 | None:intergenic |
| GGGCTCTTCATTAAGCTATA+AGG | 0.343387 | 8.1:-9343408 | MS.gene035259:CDS |
| CTAGCTGCTATTGCATCTTC+AGG | 0.343456 | 8.1:+9344761 | None:intergenic |
| TCCGGCTCTAAGCGATGATT+TGG | 0.347002 | 8.1:-9344944 | MS.gene035259:CDS |
| TTTGGGAACTTTCATGTCTT+GGG | 0.348932 | 8.1:-9344926 | MS.gene035259:CDS |
| CAAAACGGTGCGCAAGGAAT+TGG | 0.349390 | 8.1:-9344737 | MS.gene035259:CDS |
| GGATATTGAGTTCACTGTTC+AGG | 0.351127 | 8.1:-9346541 | MS.gene035259:CDS |
| ATCTTCAGGTGTCCTGATTC+CGG | 0.351942 | 8.1:+9346765 | None:intergenic |
| ACTGGTTTGCCTGCATCCCC+TGG | 0.352559 | 8.1:-9346000 | MS.gene035259:CDS |
| AGACGTTTCTTAGACATGTT+TGG | 0.353523 | 8.1:-9347640 | MS.gene035259:CDS |
| GCATCCCCTGGAGCTGCAGT+TGG | 0.361008 | 8.1:-9345988 | MS.gene035259:CDS |
| TGGGGAAAGTGTTGTGTGTC+TGG | 0.364893 | 8.1:-9345186 | MS.gene035259:CDS |
| CCCTGGAGCTGCAGTTGGGC+AGG | 0.365744 | 8.1:-9345983 | MS.gene035259:CDS |
| TACAGTCCTTCCAGAGATAA+TGG | 0.367046 | 8.1:-9343771 | MS.gene035259:CDS |
| GCCTGCATCTCAGTCAATTC+AGG | 0.371622 | 8.1:+9343839 | None:intergenic |
| TGCTTCAGATGAAAGGATAA+AGG | 0.371733 | 8.1:-9344538 | MS.gene035259:CDS |
| TTTGTGGTGGGTGGTGTTGT+TGG | 0.374403 | 8.1:+9350709 | None:intergenic |
| CGCAAGGAATTGGACTTTGC+AGG | 0.375720 | 8.1:-9344727 | MS.gene035259:CDS |
| GACCTTACCCAAATGACATT+TGG | 0.377792 | 8.1:-9343171 | MS.gene035259:CDS |
| AGGAGCATTAATCAGATAAC+TGG | 0.379456 | 8.1:-9347106 | MS.gene035259:CDS |
| AGGATGTAGTTGCCGGAATC+AGG | 0.380829 | 8.1:-9346777 | MS.gene035259:CDS |
| TAGATTTGTTGAAAATGAAA+TGG | 0.382138 | 8.1:-9348506 | MS.gene035259:CDS |
| CTCCTATACTTATTAGCCCT+TGG | 0.384153 | 8.1:+9347124 | None:intergenic |
| AATACTTACCAAGGACTTCA+TGG | 0.385011 | 8.1:+9348822 | None:intergenic |
| CATCAAAATTTGCACAGAAA+AGG | 0.387242 | 8.1:-9342723 | MS.gene035259:CDS |
| AGACAAGTCCAGAGGATGTC+GGG | 0.387286 | 8.1:-9345284 | MS.gene035259:CDS |
| GATGATAGGTGGTTGTAATT+GGG | 0.390892 | 8.1:-9345050 | MS.gene035259:intron |
| ATTTCATTTAAATCACCTTC+AGG | 0.399860 | 8.1:+9344354 | None:intergenic |
| ACCTGCCCAACTGCAGCTCC+AGG | 0.399930 | 8.1:+9345982 | None:intergenic |
| AACATTCAATCCATGGTGTT+TGG | 0.400061 | 8.1:-9347064 | MS.gene035259:CDS |
| GGGAGCCAACTTAGCAGAAA+TGG | 0.403069 | 8.1:-9348647 | MS.gene035259:CDS |
| GTTGCATTCTTTGCTCAACT+TGG | 0.406680 | 8.1:-9342514 | MS.gene035259:CDS |
| CTCCTCCTCTCTGTGCGCTC+TGG | 0.414979 | 8.1:-9348454 | MS.gene035259:CDS |
| TCCATGGTGTTTGGTAATAT+GGG | 0.415863 | 8.1:-9347055 | MS.gene035259:CDS |
| TCCTATACTTATTAGCCCTT+GGG | 0.421836 | 8.1:+9347125 | None:intergenic |
| ATCAAAATTTGCACAGAAAA+GGG | 0.422930 | 8.1:-9342722 | MS.gene035259:CDS |
| GGTTCCAAATGAAAAGAAAT+CGG | 0.423220 | 8.1:+9343197 | None:intergenic |
| TGGGTGGTGTTGTTGGAGTA+AGG | 0.424741 | 8.1:+9350716 | None:intergenic |
| TGTTGCCATTTCTGCTAAGT+TGG | 0.425651 | 8.1:+9348642 | None:intergenic |
| TTAGCAGAAATGGCAACAAT+TGG | 0.428853 | 8.1:-9348637 | MS.gene035259:CDS |
| TTGAATGATGAAGTGGTTGC+TGG | 0.429675 | 8.1:-9347706 | MS.gene035259:CDS |
| ACTATGGAACTAACCTCAAA+TGG | 0.430135 | 8.1:+9343081 | None:intergenic |
| CATCCCCTGGAGCTGCAGTT+GGG | 0.430253 | 8.1:-9345987 | MS.gene035259:CDS |
| ATCTCCTCCCACAAACCATT+TGG | 0.430655 | 8.1:+9348541 | None:intergenic |
| GGCCGTGAGAATGATGATAT+TGG | 0.430946 | 8.1:-9344517 | MS.gene035259:CDS |
| CATTCCACATTCATTGTTTG+AGG | 0.433554 | 8.1:-9347432 | MS.gene035259:CDS |
| CTGCTGTTGTAGCCCGTGGA+TGG | 0.437327 | 8.1:-9345206 | MS.gene035259:CDS |
| GATTTCCATGCCTGGAATGA+TGG | 0.438634 | 8.1:-9347749 | MS.gene035259:CDS |
| TGCTGCTAAACCAAATTTGA+AGG | 0.439110 | 8.1:-9342696 | MS.gene035259:intron |
| TCCTTGTGCATGCCATTGTT+CGG | 0.441556 | 8.1:+9345939 | None:intergenic |
| TCCACAGGTGAGGTGATACT+TGG | 0.444321 | 8.1:-9344985 | MS.gene035259:CDS |
| ATGGGAAATACTTCAGGAAC+TGG | 0.445089 | 8.1:-9347037 | MS.gene035259:CDS |
| TTCACTAGAAATCCAAGCAC+TGG | 0.446965 | 8.1:-9347007 | MS.gene035259:CDS |
| TGTTGGAGTAAGGATAGTTT+GGG | 0.447302 | 8.1:+9350726 | None:intergenic |
| ACTGTAACCAAATGTCATTT+GGG | 0.448913 | 8.1:+9343164 | None:intergenic |
| TTAATTGTAGTTGGGAGGAA+AGG | 0.450313 | 8.1:-9348668 | MS.gene035259:intron |
| ACTGCAGCTCCAGGGGATGC+AGG | 0.452972 | 8.1:+9345991 | None:intergenic |
| TCAAAATCTGATCTTTGATA+AGG | 0.453983 | 8.1:+9344450 | None:intergenic |
| CTGGGGAAAAGAAACTTTAT+GGG | 0.455760 | 8.1:-9346988 | MS.gene035259:CDS |
| GGAGTTTCTCATTAATGCTC+AGG | 0.458500 | 8.1:-9346966 | MS.gene035259:intron |
| TGATGAAGTGGTTGCTGGGT+TGG | 0.459454 | 8.1:-9347701 | MS.gene035259:CDS |
| ATGAAATGGAGGCCTTTCTT+GGG | 0.459941 | 8.1:-9348492 | MS.gene035259:CDS |
| TAGGGAGAGGATGTAGTTGC+CGG | 0.460223 | 8.1:-9346784 | MS.gene035259:CDS |
| GAATATGTGGAGAGCATGGC+GGG | 0.461451 | 8.1:-9342549 | MS.gene035259:CDS |
| CTTCATGAATTTCTTCCTGA+AGG | 0.463137 | 8.1:-9344369 | MS.gene035259:CDS |
| ATTGGTTTATCTGTGCCTCC+TGG | 0.464909 | 8.1:-9348619 | MS.gene035259:CDS |
| GAGTGTCTACCTCGAAGCTA+AGG | 0.466406 | 8.1:-9347318 | MS.gene035259:CDS |
| GAGATGTCTTCCATAGTAAG+AGG | 0.473678 | 8.1:-9350922 | MS.gene035259:CDS |
| ATGAGTGGAACCATTATCTC+TGG | 0.476584 | 8.1:+9343761 | None:intergenic |
| GATTATCAGGTTGGAATATG+TGG | 0.476611 | 8.1:-9342562 | MS.gene035259:intron |
| CCGGCTCTAAGCGATGATTT+GGG | 0.476985 | 8.1:-9344943 | MS.gene035259:CDS |
| TGAGAAAGTGTTCTCTGAGA+TGG | 0.479729 | 8.1:-9343429 | MS.gene035259:CDS |
| TCCTGAATTGACTGAGATGC+AGG | 0.481091 | 8.1:-9343840 | MS.gene035259:CDS |
| TGCTGTTGTAGCCCGTGGAT+GGG | 0.481959 | 8.1:-9345205 | MS.gene035259:CDS |
| AGAACTGTGTCCATCATTCC+AGG | 0.483639 | 8.1:+9347739 | None:intergenic |
| AAGAATGATGTTAGTGTTGG+TGG | 0.484081 | 8.1:-9350847 | MS.gene035259:CDS |
| TCAAGTTCCTTATAAGCATC+CGG | 0.489294 | 8.1:+9346718 | None:intergenic |
| TTGTGGGAGGAGATACTTGA+AGG | 0.489564 | 8.1:-9348532 | MS.gene035259:CDS |
| GGTGATTTAAATGAAATTGT+TGG | 0.491174 | 8.1:-9344348 | MS.gene035259:CDS |
| ACATAATATCAGAAGGAGAA+TGG | 0.491862 | 8.1:-9345023 | MS.gene035259:CDS |
| AGTGGAAAACGTACTGGTAA+AGG | 0.492046 | 8.1:-9346489 | MS.gene035259:CDS |
| GAAAAGCTAAAGTATTCAAA+AGG | 0.493897 | 8.1:-9347401 | MS.gene035259:CDS |
| CTGCCCAACTGCAGCTCCAG+GGG | 0.494906 | 8.1:+9345984 | None:intergenic |
| AGTGGAAGGAGTTGCAGTTA+CGG | 0.497327 | 8.1:-9350804 | MS.gene035259:CDS |
| AGAACCTACCAAATGGTTTG+TGG | 0.497544 | 8.1:-9348549 | MS.gene035259:CDS |
| TTTGAAGTTAATCCCATGCT+TGG | 0.498251 | 8.1:-9344264 | MS.gene035259:CDS |
| AACCAGATCTTTGAGATCGT+TGG | 0.499844 | 8.1:+9347352 | None:intergenic |
| TAATTGTAGTTGGGAGGAAA+GGG | 0.500634 | 8.1:-9348667 | MS.gene035259:intron |
| AGCCAACGATCTCAAAGATC+TGG | 0.501318 | 8.1:-9347354 | MS.gene035259:CDS |
| TGAGGTGATACTTGGAAAGC+AGG | 0.501601 | 8.1:-9344977 | MS.gene035259:CDS |
| TAGTAAGAGGCATAGTCATA+AGG | 0.501956 | 8.1:-9350909 | MS.gene035259:CDS |
| AATCAAAATAGCTGTAGATA+TGG | 0.503273 | 8.1:-9346463 | MS.gene035259:CDS |
| GCAAAGAATGCAACAGAAGA+AGG | 0.504771 | 8.1:+9342523 | None:intergenic |
| GGAGAATGGATCTCGTTGAA+TGG | 0.505652 | 8.1:-9345009 | MS.gene035259:CDS |
| GAACCTACCAAATGGTTTGT+GGG | 0.508102 | 8.1:-9348548 | MS.gene035259:CDS |
| TTTGCAGCATGATCCATTTG+AGG | 0.509567 | 8.1:-9343094 | MS.gene035259:intron |
| TCCACTCATCGGTACACCTC+AGG | 0.510064 | 8.1:-9343747 | MS.gene035259:intron |
| CTTCCTACATACCTATCCGC+AGG | 0.510814 | 8.1:-9343120 | MS.gene035259:CDS |
| TCTGCAACTAGTGCAGCTCT+TGG | 0.512618 | 8.1:+9343365 | None:intergenic |
| CCAAGTAAACGACCATGAAA+AGG | 0.515296 | 8.1:-9345151 | MS.gene035259:intron |
| CACAACACTTTCCCCATCCA+CGG | 0.517943 | 8.1:+9345193 | None:intergenic |
| AGCAGCTTGGAAAACGGCAC+GGG | 0.518749 | 8.1:+9343817 | None:intergenic |
| CTAACAACCGGATTGTTACT+GGG | 0.520228 | 8.1:+9344400 | None:intergenic |
| TCAATTCTTGGGATAGCCCA+AGG | 0.520836 | 8.1:-9347141 | MS.gene035259:CDS |
| TGAATGATGAAGTGGTTGCT+GGG | 0.521032 | 8.1:-9347705 | MS.gene035259:CDS |
| CACCAGAGCGCACAGAGAGG+AGG | 0.524479 | 8.1:+9348452 | None:intergenic |
| CTGCTGAAGCTGCCGAACAA+TGG | 0.524989 | 8.1:-9345951 | MS.gene035259:CDS |
| ATATATCAGATTTCCATGCC+TGG | 0.525782 | 8.1:-9347757 | MS.gene035259:intron |
| TGTCATTTGGGTAAGGTCGT+TGG | 0.526879 | 8.1:+9343176 | None:intergenic |
| CTCTGTGCGCTCTGGTGCTG+CGG | 0.527367 | 8.1:-9348446 | MS.gene035259:intron |
| TGAAATAGCAGCTTGGAAAA+CGG | 0.532518 | 8.1:+9343811 | None:intergenic |
| AATGAAAAGAACCTACCAAA+TGG | 0.534270 | 8.1:-9348556 | MS.gene035259:CDS |
| GAAGTGGAGGATCTAACAAC+CGG | 0.535317 | 8.1:+9344388 | None:intergenic |
| AAAGCAGGCACTTTCTCCTC+CGG | 0.536936 | 8.1:-9344962 | MS.gene035259:CDS |
| ATCTCGTTGAATGGATCCAC+AGG | 0.538595 | 8.1:-9345000 | MS.gene035259:CDS |
| AAACAAGGCCATGAAGTCCT+TGG | 0.538622 | 8.1:-9348830 | MS.gene035259:intron |
| AAGGACAAAGTGGTTGCCAC+TGG | 0.539776 | 8.1:-9346018 | MS.gene035259:CDS |
| GAGAAAGTGTTCTCTGAGAT+GGG | 0.540276 | 8.1:-9343428 | MS.gene035259:CDS |
| GCAGCTCAATTTGCAGCGTA+AGG | 0.540463 | 8.1:-9342298 | None:intergenic |
| CCCAAATCATCGCTTAGAGC+CGG | 0.541613 | 8.1:+9344943 | None:intergenic |
| GAGATAATGGTTCCACTCAT+CGG | 0.542002 | 8.1:-9343758 | MS.gene035259:CDS |
| GCCCAAGGGCTAATAAGTAT+AGG | 0.543811 | 8.1:-9347126 | MS.gene035259:CDS |
| AACCAAATGTCATTTGGGTA+AGG | 0.544430 | 8.1:+9343169 | None:intergenic |
| AGCTGTAGATATGGTCAATG+AGG | 0.545269 | 8.1:-9346454 | MS.gene035259:CDS |
| ATGGTCGTTTACTTGGATGT+CGG | 0.545344 | 8.1:+9345158 | None:intergenic |
| CGTTTCTTAGACATGTTTGG+AGG | 0.547428 | 8.1:-9347637 | MS.gene035259:CDS |
| GAATCATTACAAGGATATGA+TGG | 0.551273 | 8.1:-9346674 | MS.gene035259:intron |
| CCTGCCCAACTGCAGCTCCA+GGG | 0.551694 | 8.1:+9345983 | None:intergenic |
| TATTCGTTCTGCAATCAAGA+TGG | 0.555466 | 8.1:-9346421 | MS.gene035259:CDS |
| GCAATAGCAGCTAGACAAAA+CGG | 0.556137 | 8.1:-9344752 | MS.gene035259:CDS |
| TAATCAGATAACTGGACTAG+TGG | 0.556974 | 8.1:-9347098 | MS.gene035259:CDS |
| AGCCAATATCATCATTCTCA+CGG | 0.557183 | 8.1:+9344515 | None:intergenic |
| AGCTGCACTAGTTGCAGATG+AGG | 0.560078 | 8.1:-9343360 | MS.gene035259:intron |
| ATGGTCTCCCAGTAACAATC+CGG | 0.560105 | 8.1:-9344407 | MS.gene035259:CDS |
| TGTCGAAGTGGAAAACGTAC+TGG | 0.564174 | 8.1:-9346495 | MS.gene035259:CDS |
| AAGAAGAAGAAATAGTCTCT+AGG | 0.566694 | 8.1:-9344299 | MS.gene035259:CDS |
| GCTGTTGTAGCCCGTGGATG+GGG | 0.568721 | 8.1:-9345204 | MS.gene035259:CDS |
| TGCCGTAAACATTCAATCCA+TGG | 0.569861 | 8.1:-9347071 | MS.gene035259:CDS |
| GCTGCTGCAAGTCTAGCAAT+CGG | 0.570121 | 8.1:+9342316 | None:intergenic |
| ATTTGTTGAAAATGAAATGG+AGG | 0.571551 | 8.1:-9348503 | MS.gene035259:CDS |
| TTCTCCTCAAACAATGAATG+TGG | 0.573157 | 8.1:+9347428 | None:intergenic |
| TTTGGCAAAGGTAAAAGTGA+AGG | 0.573553 | 8.1:-9348853 | MS.gene035259:CDS |
| TCACTAGAAATCCAAGCACT+GGG | 0.573756 | 8.1:-9347006 | MS.gene035259:CDS |
| TCATACTAATCTGACCTGAA+TGG | 0.573986 | 8.1:+9342469 | None:intergenic |
| TGTGTCCATCATTCCAGGCA+TGG | 0.575045 | 8.1:+9347744 | None:intergenic |
| GACCATGAAAACTTGCATGC+CGG | 0.575358 | 8.1:-9346737 | MS.gene035259:CDS |
| AAGGGAGAAAAGTTTCCCTC+AGG | 0.576363 | 8.1:-9347299 | MS.gene035259:intron |
| ATGATAGGTGGTTGTAATTG+GGG | 0.576454 | 8.1:-9345049 | MS.gene035259:intron |
| GCTAGACAAAACGGTGCGCA+AGG | 0.576960 | 8.1:-9344743 | MS.gene035259:CDS |
| TCAGGAAGAAATTCATGAAG+TGG | 0.578057 | 8.1:+9344372 | None:intergenic |
| GCAGCCACGAAAACCAAGCA+TGG | 0.580063 | 8.1:+9344251 | None:intergenic |
| TCTGTTGATATAGTGAGTCC+AGG | 0.580190 | 8.1:+9348601 | None:intergenic |
| ATCCCTGCGGATAGGTATGT+AGG | 0.580219 | 8.1:+9343117 | None:intergenic |
| GCTGCAAAATCCCTGCGGAT+AGG | 0.585813 | 8.1:+9343109 | None:intergenic |
| TCTTCATTAAGCTATAAGGT+TGG | 0.586617 | 8.1:-9343404 | MS.gene035259:CDS |
| AAGTACAAAGGTGCAGTGGA+AGG | 0.586751 | 8.1:-9350818 | MS.gene035259:CDS |
| TCCAAGTATCACCTCACCTG+TGG | 0.588151 | 8.1:+9344984 | None:intergenic |
| CTGTTCAGGAAAATAGATTG+TGG | 0.588451 | 8.1:-9346527 | MS.gene035259:CDS |
| GCTGTAGATATGGTCAATGA+GGG | 0.588831 | 8.1:-9346453 | MS.gene035259:CDS |
| GAGTAAGGATAGTTTGGGCA+CGG | 0.590655 | 8.1:+9350731 | None:intergenic |
| AGGTAAAAGTGAAGGAAACA+AGG | 0.590908 | 8.1:-9348845 | MS.gene035259:CDS |
| CATGCTGCTGTTGTAGCCCG+TGG | 0.591629 | 8.1:-9345210 | MS.gene035259:CDS |
| GCTATTTCAGTGAGTAGCCA+TGG | 0.591843 | 8.1:-9343797 | MS.gene035259:CDS |
| GGGGATAACATAATATCAGA+AGG | 0.591935 | 8.1:-9345030 | MS.gene035259:CDS |
| GGTGAACTAACTTCTCAGAC+AGG | 0.596053 | 8.1:-9344327 | MS.gene035259:CDS |
| AGTGTCTACCTCGAAGCTAA+GGG | 0.598429 | 8.1:-9347317 | MS.gene035259:CDS |
| GAAGAAGTACAAAGGTGCAG+TGG | 0.598582 | 8.1:-9350822 | MS.gene035259:CDS |
| GATTCTAGAGAATCATTACA+AGG | 0.598884 | 8.1:-9346683 | MS.gene035259:CDS |
| CAATTCTTGGGATAGCCCAA+GGG | 0.599592 | 8.1:-9347140 | MS.gene035259:CDS |
| GTTGGAATATGTGGAGAGCA+TGG | 0.600312 | 8.1:-9342553 | MS.gene035259:CDS |
| CCTCCCACAAACCATTTGGT+AGG | 0.601228 | 8.1:+9348545 | None:intergenic |
| TCCCATATTACCAAACACCA+TGG | 0.602032 | 8.1:+9347054 | None:intergenic |
| GAGCGCACAGAGAGGAGGAG+AGG | 0.602197 | 8.1:+9348457 | None:intergenic |
| GCCGAACAATGGCATGCACA+AGG | 0.602710 | 8.1:-9345940 | MS.gene035259:CDS |
| AACAAGAATGATGTTAGTGT+TGG | 0.604067 | 8.1:-9350850 | MS.gene035259:CDS |
| TCTTGGATTGAATGATGAAG+TGG | 0.606505 | 8.1:-9347713 | MS.gene035259:CDS |
| TGATCAGCTCCTACACCCAC+AGG | 0.609765 | 8.1:-9346382 | MS.gene035259:intron |
| TACTCACTGAAATAGCAGCT+TGG | 0.609929 | 8.1:+9343804 | None:intergenic |
| ATCTAAGTACAAGGACAAAG+TGG | 0.610286 | 8.1:-9346028 | MS.gene035259:CDS |
| GTGGAACCATTATCTCTGGA+AGG | 0.611076 | 8.1:+9343765 | None:intergenic |
| GAGACAAGTCCAGAGGATGT+CGG | 0.612900 | 8.1:-9345285 | MS.gene035259:CDS |
| GTGTGTTAATTGTAGTTGGG+AGG | 0.613934 | 8.1:-9348673 | MS.gene035259:intron |
| AATCAGATAACTGGACTAGT+GGG | 0.613941 | 8.1:-9347097 | MS.gene035259:CDS |
| GGAAGAAATTCATGAAGTGG+AGG | 0.614194 | 8.1:+9344375 | None:intergenic |
| TGAGGATCCATCTAAGTACA+AGG | 0.615147 | 8.1:-9346037 | MS.gene035259:CDS |
| CAGCCACGAAAACCAAGCAT+GGG | 0.615672 | 8.1:+9344252 | None:intergenic |
| ACAACACTTTCCCCATCCAC+GGG | 0.616402 | 8.1:+9345194 | None:intergenic |
| GACAAGTCCAGAGGATGTCG+GGG | 0.618218 | 8.1:-9345283 | MS.gene035259:CDS |
| AAGCATATACCTGTGGGTGT+AGG | 0.618227 | 8.1:+9346373 | None:intergenic |
| CTGCAGGTACTTGACCAGAA+AGG | 0.619999 | 8.1:-9342758 | MS.gene035259:intron |
| TAGCAGCTTGGAAAACGGCA+CGG | 0.620165 | 8.1:+9343816 | None:intergenic |
| AGGAGCTGATCAAGATGTTG+TGG | 0.628878 | 8.1:+9346393 | None:intergenic |
| TTCCTACATACCTATCCGCA+GGG | 0.630523 | 8.1:-9343119 | MS.gene035259:CDS |
| GGATGCTTATAAGGAACTTG+AGG | 0.631062 | 8.1:-9346716 | MS.gene035259:CDS |
| GTTGGCATCTTGACAGCTAG+AGG | 0.632776 | 8.1:-9345246 | MS.gene035259:CDS |
| GGTACTTGACCAGAAAGGTG+TGG | 0.634510 | 8.1:-9342753 | MS.gene035259:CDS |
| GTACTTGACCAGAAAGGTGT+GGG | 0.637870 | 8.1:-9342752 | MS.gene035259:CDS |
| AGAATGATGTTAGTGTTGGT+GGG | 0.642242 | 8.1:-9350846 | MS.gene035259:CDS |
| GCCTGAGGTGTACCGATGAG+TGG | 0.642967 | 8.1:+9343746 | None:intergenic |
| AGGGGATGCAGGCAAACCAG+TGG | 0.643058 | 8.1:+9346002 | None:intergenic |
| ACTTTGCAGGACAGAACACA+TGG | 0.645120 | 8.1:-9344714 | MS.gene035259:intron |
| TGATGAAATAAGGAATCTGA+AGG | 0.648348 | 8.1:-9344902 | MS.gene035259:intron |
| GGAATATGTGGAGAGCATGG+CGG | 0.649381 | 8.1:-9342550 | MS.gene035259:CDS |
| CTGGAAGGACTGTAATACCA+TGG | 0.650829 | 8.1:+9343780 | None:intergenic |
| AAATCATCGCTTAGAGCCGG+AGG | 0.654508 | 8.1:+9344946 | None:intergenic |
| CAGCACCAGAGCGCACAGAG+AGG | 0.669098 | 8.1:+9348449 | None:intergenic |
| GGCATCTTGACAGCTAGAGG+TGG | 0.670250 | 8.1:-9345243 | MS.gene035259:CDS |
| AAGGACAGAGACAAGTCCAG+AGG | 0.685240 | 8.1:-9345292 | MS.gene035259:CDS |
| TGGCTATTACGCAAGAACAG+AGG | 0.687603 | 8.1:-9344497 | MS.gene035259:CDS |
| GTTGAATGGATCCACAGGTG+AGG | 0.695332 | 8.1:-9344995 | MS.gene035259:CDS |
| TGGATGTTGCAATGTCGAAG+TGG | 0.695711 | 8.1:-9346507 | MS.gene035259:CDS |
| CTGTAGATATGGTCAATGAG+GGG | 0.699069 | 8.1:-9346452 | MS.gene035259:CDS |
| CCTACCAAATGGTTTGTGGG+AGG | 0.699192 | 8.1:-9348545 | MS.gene035259:CDS |
| AATATGTGGAGAGCATGGCG+GGG | 0.702583 | 8.1:-9342548 | MS.gene035259:CDS |
| TGGTGGGAGAAGAAGTACAA+AGG | 0.710183 | 8.1:-9350830 | MS.gene035259:CDS |
| ACAAGTCCAGAGGATGTCGG+GGG | 0.714831 | 8.1:-9345282 | MS.gene035259:CDS |
| CACTAGAAATCCAAGCACTG+GGG | 0.715102 | 8.1:-9347005 | MS.gene035259:CDS |
| TGGGGAAAAGAAACTTTATG+GGG | 0.717321 | 8.1:-9346987 | MS.gene035259:CDS |
| GTTGATATAGTGAGTCCAGG+AGG | 0.729602 | 8.1:+9348604 | None:intergenic |
| AGTTACGGCTTACATCAACA+TGG | 0.736612 | 8.1:-9350789 | MS.gene035259:CDS |
| ATCATGCTGCAAAATCCCTG+CGG | 0.765148 | 8.1:+9343104 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 9342300 | 9350941 | 9342300 | ID=MS.gene035259 |
| chr8.1 | mRNA | 9342300 | 9350941 | 9342300 | ID=MS.gene035259.t1;Parent=MS.gene035259 |
| chr8.1 | exon | 9350705 | 9350941 | 9350705 | ID=MS.gene035259.t1.exon1;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9350705 | 9350941 | 9350705 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9348831 | 9348887 | 9348831 | ID=MS.gene035259.t1.exon2;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9348831 | 9348887 | 9348831 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9348447 | 9348680 | 9348447 | ID=MS.gene035259.t1.exon3;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9348447 | 9348680 | 9348447 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9347633 | 9347770 | 9347633 | ID=MS.gene035259.t1.exon4;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9347633 | 9347770 | 9347633 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9347300 | 9347462 | 9347300 | ID=MS.gene035259.t1.exon5;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9347300 | 9347462 | 9347300 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9346967 | 9347202 | 9346967 | ID=MS.gene035259.t1.exon6;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9346967 | 9347202 | 9346967 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9346675 | 9346803 | 9346675 | ID=MS.gene035259.t1.exon7;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9346675 | 9346803 | 9346675 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9346383 | 9346562 | 9346383 | ID=MS.gene035259.t1.exon8;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9346383 | 9346562 | 9346383 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9345924 | 9346061 | 9345924 | ID=MS.gene035259.t1.exon9;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9345924 | 9346061 | 9345924 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9345152 | 9345316 | 9345152 | ID=MS.gene035259.t1.exon10;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9345152 | 9345316 | 9345152 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9344903 | 9345064 | 9344903 | ID=MS.gene035259.t1.exon11;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9344903 | 9345064 | 9344903 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9344715 | 9344804 | 9344715 | ID=MS.gene035259.t1.exon12;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9344715 | 9344804 | 9344715 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9344249 | 9344565 | 9344249 | ID=MS.gene035259.t1.exon13;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9344249 | 9344565 | 9344249 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9343748 | 9343877 | 9343748 | ID=MS.gene035259.t1.exon14;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9343748 | 9343877 | 9343748 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9343361 | 9343489 | 9343361 | ID=MS.gene035259.t1.exon15;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9343361 | 9343489 | 9343361 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9343095 | 9343232 | 9343095 | ID=MS.gene035259.t1.exon16;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9343095 | 9343232 | 9343095 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9342697 | 9342774 | 9342697 | ID=MS.gene035259.t1.exon17;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9342697 | 9342774 | 9342697 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9342484 | 9342575 | 9342484 | ID=MS.gene035259.t1.exon18;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9342484 | 9342575 | 9342484 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| chr8.1 | exon | 9342300 | 9342342 | 9342300 | ID=MS.gene035259.t1.exon19;Parent=MS.gene035259.t1 |
| chr8.1 | CDS | 9342300 | 9342342 | 9342300 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
| Gene Sequence |
| Protein sequence |