Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035259.t1 | RHN64189.1 | 97.4 | 951 | 17 | 3 | 1 | 951 | 1 | 943 | 0.00E+00 | 1817 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035259.t1 | Q42736 | 84.1 | 885 | 139 | 1 | 66 | 948 | 69 | 953 | 0.0e+00 | 1508.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035259.t1 | A0A396IF27 | 97.4 | 951 | 17 | 3 | 1 | 951 | 1 | 943 | 0.0e+00 | 1817.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035259.t1 | MTR_4g118350 | 90.750 | 627 | 55 | 2 | 1 | 627 | 1 | 624 | 0.0 | 1161 |
MS.gene035259.t1 | MTR_4g118355 | 91.781 | 292 | 24 | 0 | 657 | 948 | 1 | 292 | 0.0 | 559 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 18 | 952 | 0.0 | 1529 |
MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 18 | 952 | 0.0 | 1529 |
MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 25 | 959 | 0.0 | 1529 |
MS.gene035259.t1 | AT4G15530 | 78.072 | 944 | 194 | 5 | 9 | 948 | 25 | 959 | 0.0 | 1529 |
MS.gene035259.t1 | AT4G15530 | 82.644 | 870 | 150 | 1 | 79 | 948 | 3 | 871 | 0.0 | 1520 |
MS.gene035259.t1 | AT4G15530 | 82.670 | 854 | 147 | 1 | 95 | 948 | 1 | 853 | 0.0 | 1490 |
MS.gene035259.t1 | AT4G15530 | 82.670 | 854 | 147 | 1 | 95 | 948 | 1 | 853 | 0.0 | 1490 |
Find 244 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCATGGTGTTTGGTAATA+TGG | 0.138638 | 8.1:-9347056 | MS.gene035259:CDS |
GCTAATTCTAGTTGCTTCTT+TGG | 0.182850 | 8.1:+9347178 | None:intergenic |
TGAGTTGACCCACACCTTTC+TGG | 0.196040 | 8.1:+9342744 | None:intergenic |
TGGTAAGTTACCTTCAAATT+TGG | 0.225158 | 8.1:+9342686 | None:intergenic |
ACTGGGGAAAAGAAACTTTA+TGG | 0.240216 | 8.1:-9346989 | MS.gene035259:CDS |
TGATGATAGGTGGTTGTAAT+TGG | 0.242997 | 8.1:-9345051 | MS.gene035259:intron |
TATGACTATGCCTCTTACTA+TGG | 0.274466 | 8.1:+9350912 | None:intergenic |
TTGCATGCCGGATGCTTATA+AGG | 0.282445 | 8.1:-9346725 | MS.gene035259:CDS |
GACATCAAGTGAGTTTAATA+AGG | 0.284688 | 8.1:-9343460 | MS.gene035259:CDS |
ACTTTGTCCTTGTACTTAGA+TGG | 0.289385 | 8.1:+9346030 | None:intergenic |
CACCATGGATTGAATGTTTA+CGG | 0.295707 | 8.1:+9347069 | None:intergenic |
TACTGTAACCAAATGTCATT+TGG | 0.303402 | 8.1:+9343163 | None:intergenic |
AATGAAATGGAGGCCTTTCT+TGG | 0.307194 | 8.1:-9348493 | MS.gene035259:CDS |
TTCATGGTCTCTAAATCTTC+AGG | 0.312014 | 8.1:+9346751 | None:intergenic |
ATGTCTCATGTTCACCATTC+AGG | 0.321813 | 8.1:-9342483 | MS.gene035259:intron |
ATACAGAGAGTGTTCACTTT+TGG | 0.324769 | 8.1:-9348871 | MS.gene035259:intron |
ACACATCAACATCAGATAAT+AGG | 0.326515 | 8.1:-9350885 | MS.gene035259:CDS |
ATTTGGGAACTTTCATGTCT+TGG | 0.328110 | 8.1:-9344927 | MS.gene035259:CDS |
ATAGTTTGGGCACGGATTAA+AGG | 0.328392 | 8.1:+9350739 | None:intergenic |
TGTCTTGGGCTGATGAAATA+AGG | 0.330420 | 8.1:-9344912 | MS.gene035259:CDS |
ATGGACACAGTTCTTAATCT+TGG | 0.333394 | 8.1:-9347730 | MS.gene035259:CDS |
TTGTTGGAGTAAGGATAGTT+TGG | 0.334518 | 8.1:+9350725 | None:intergenic |
GGTAATATGGGAAATACTTC+AGG | 0.336156 | 8.1:-9347043 | MS.gene035259:CDS |
TCTAACAACCGGATTGTTAC+TGG | 0.340369 | 8.1:+9344399 | None:intergenic |
GGGCTCTTCATTAAGCTATA+AGG | 0.343387 | 8.1:-9343408 | MS.gene035259:CDS |
CTAGCTGCTATTGCATCTTC+AGG | 0.343456 | 8.1:+9344761 | None:intergenic |
TCCGGCTCTAAGCGATGATT+TGG | 0.347002 | 8.1:-9344944 | MS.gene035259:CDS |
TTTGGGAACTTTCATGTCTT+GGG | 0.348932 | 8.1:-9344926 | MS.gene035259:CDS |
CAAAACGGTGCGCAAGGAAT+TGG | 0.349390 | 8.1:-9344737 | MS.gene035259:CDS |
GGATATTGAGTTCACTGTTC+AGG | 0.351127 | 8.1:-9346541 | MS.gene035259:CDS |
ATCTTCAGGTGTCCTGATTC+CGG | 0.351942 | 8.1:+9346765 | None:intergenic |
ACTGGTTTGCCTGCATCCCC+TGG | 0.352559 | 8.1:-9346000 | MS.gene035259:CDS |
AGACGTTTCTTAGACATGTT+TGG | 0.353523 | 8.1:-9347640 | MS.gene035259:CDS |
GCATCCCCTGGAGCTGCAGT+TGG | 0.361008 | 8.1:-9345988 | MS.gene035259:CDS |
TGGGGAAAGTGTTGTGTGTC+TGG | 0.364893 | 8.1:-9345186 | MS.gene035259:CDS |
CCCTGGAGCTGCAGTTGGGC+AGG | 0.365744 | 8.1:-9345983 | MS.gene035259:CDS |
TACAGTCCTTCCAGAGATAA+TGG | 0.367046 | 8.1:-9343771 | MS.gene035259:CDS |
GCCTGCATCTCAGTCAATTC+AGG | 0.371622 | 8.1:+9343839 | None:intergenic |
TGCTTCAGATGAAAGGATAA+AGG | 0.371733 | 8.1:-9344538 | MS.gene035259:CDS |
TTTGTGGTGGGTGGTGTTGT+TGG | 0.374403 | 8.1:+9350709 | None:intergenic |
CGCAAGGAATTGGACTTTGC+AGG | 0.375720 | 8.1:-9344727 | MS.gene035259:CDS |
GACCTTACCCAAATGACATT+TGG | 0.377792 | 8.1:-9343171 | MS.gene035259:CDS |
AGGAGCATTAATCAGATAAC+TGG | 0.379456 | 8.1:-9347106 | MS.gene035259:CDS |
AGGATGTAGTTGCCGGAATC+AGG | 0.380829 | 8.1:-9346777 | MS.gene035259:CDS |
TAGATTTGTTGAAAATGAAA+TGG | 0.382138 | 8.1:-9348506 | MS.gene035259:CDS |
CTCCTATACTTATTAGCCCT+TGG | 0.384153 | 8.1:+9347124 | None:intergenic |
AATACTTACCAAGGACTTCA+TGG | 0.385011 | 8.1:+9348822 | None:intergenic |
CATCAAAATTTGCACAGAAA+AGG | 0.387242 | 8.1:-9342723 | MS.gene035259:CDS |
AGACAAGTCCAGAGGATGTC+GGG | 0.387286 | 8.1:-9345284 | MS.gene035259:CDS |
GATGATAGGTGGTTGTAATT+GGG | 0.390892 | 8.1:-9345050 | MS.gene035259:intron |
ATTTCATTTAAATCACCTTC+AGG | 0.399860 | 8.1:+9344354 | None:intergenic |
ACCTGCCCAACTGCAGCTCC+AGG | 0.399930 | 8.1:+9345982 | None:intergenic |
AACATTCAATCCATGGTGTT+TGG | 0.400061 | 8.1:-9347064 | MS.gene035259:CDS |
GGGAGCCAACTTAGCAGAAA+TGG | 0.403069 | 8.1:-9348647 | MS.gene035259:CDS |
GTTGCATTCTTTGCTCAACT+TGG | 0.406680 | 8.1:-9342514 | MS.gene035259:CDS |
CTCCTCCTCTCTGTGCGCTC+TGG | 0.414979 | 8.1:-9348454 | MS.gene035259:CDS |
TCCATGGTGTTTGGTAATAT+GGG | 0.415863 | 8.1:-9347055 | MS.gene035259:CDS |
TCCTATACTTATTAGCCCTT+GGG | 0.421836 | 8.1:+9347125 | None:intergenic |
ATCAAAATTTGCACAGAAAA+GGG | 0.422930 | 8.1:-9342722 | MS.gene035259:CDS |
GGTTCCAAATGAAAAGAAAT+CGG | 0.423220 | 8.1:+9343197 | None:intergenic |
TGGGTGGTGTTGTTGGAGTA+AGG | 0.424741 | 8.1:+9350716 | None:intergenic |
TGTTGCCATTTCTGCTAAGT+TGG | 0.425651 | 8.1:+9348642 | None:intergenic |
TTAGCAGAAATGGCAACAAT+TGG | 0.428853 | 8.1:-9348637 | MS.gene035259:CDS |
TTGAATGATGAAGTGGTTGC+TGG | 0.429675 | 8.1:-9347706 | MS.gene035259:CDS |
ACTATGGAACTAACCTCAAA+TGG | 0.430135 | 8.1:+9343081 | None:intergenic |
CATCCCCTGGAGCTGCAGTT+GGG | 0.430253 | 8.1:-9345987 | MS.gene035259:CDS |
ATCTCCTCCCACAAACCATT+TGG | 0.430655 | 8.1:+9348541 | None:intergenic |
GGCCGTGAGAATGATGATAT+TGG | 0.430946 | 8.1:-9344517 | MS.gene035259:CDS |
CATTCCACATTCATTGTTTG+AGG | 0.433554 | 8.1:-9347432 | MS.gene035259:CDS |
CTGCTGTTGTAGCCCGTGGA+TGG | 0.437327 | 8.1:-9345206 | MS.gene035259:CDS |
GATTTCCATGCCTGGAATGA+TGG | 0.438634 | 8.1:-9347749 | MS.gene035259:CDS |
TGCTGCTAAACCAAATTTGA+AGG | 0.439110 | 8.1:-9342696 | MS.gene035259:intron |
TCCTTGTGCATGCCATTGTT+CGG | 0.441556 | 8.1:+9345939 | None:intergenic |
TCCACAGGTGAGGTGATACT+TGG | 0.444321 | 8.1:-9344985 | MS.gene035259:CDS |
ATGGGAAATACTTCAGGAAC+TGG | 0.445089 | 8.1:-9347037 | MS.gene035259:CDS |
TTCACTAGAAATCCAAGCAC+TGG | 0.446965 | 8.1:-9347007 | MS.gene035259:CDS |
TGTTGGAGTAAGGATAGTTT+GGG | 0.447302 | 8.1:+9350726 | None:intergenic |
ACTGTAACCAAATGTCATTT+GGG | 0.448913 | 8.1:+9343164 | None:intergenic |
TTAATTGTAGTTGGGAGGAA+AGG | 0.450313 | 8.1:-9348668 | MS.gene035259:intron |
ACTGCAGCTCCAGGGGATGC+AGG | 0.452972 | 8.1:+9345991 | None:intergenic |
TCAAAATCTGATCTTTGATA+AGG | 0.453983 | 8.1:+9344450 | None:intergenic |
CTGGGGAAAAGAAACTTTAT+GGG | 0.455760 | 8.1:-9346988 | MS.gene035259:CDS |
GGAGTTTCTCATTAATGCTC+AGG | 0.458500 | 8.1:-9346966 | MS.gene035259:intron |
TGATGAAGTGGTTGCTGGGT+TGG | 0.459454 | 8.1:-9347701 | MS.gene035259:CDS |
ATGAAATGGAGGCCTTTCTT+GGG | 0.459941 | 8.1:-9348492 | MS.gene035259:CDS |
TAGGGAGAGGATGTAGTTGC+CGG | 0.460223 | 8.1:-9346784 | MS.gene035259:CDS |
GAATATGTGGAGAGCATGGC+GGG | 0.461451 | 8.1:-9342549 | MS.gene035259:CDS |
CTTCATGAATTTCTTCCTGA+AGG | 0.463137 | 8.1:-9344369 | MS.gene035259:CDS |
ATTGGTTTATCTGTGCCTCC+TGG | 0.464909 | 8.1:-9348619 | MS.gene035259:CDS |
GAGTGTCTACCTCGAAGCTA+AGG | 0.466406 | 8.1:-9347318 | MS.gene035259:CDS |
GAGATGTCTTCCATAGTAAG+AGG | 0.473678 | 8.1:-9350922 | MS.gene035259:CDS |
ATGAGTGGAACCATTATCTC+TGG | 0.476584 | 8.1:+9343761 | None:intergenic |
GATTATCAGGTTGGAATATG+TGG | 0.476611 | 8.1:-9342562 | MS.gene035259:intron |
CCGGCTCTAAGCGATGATTT+GGG | 0.476985 | 8.1:-9344943 | MS.gene035259:CDS |
TGAGAAAGTGTTCTCTGAGA+TGG | 0.479729 | 8.1:-9343429 | MS.gene035259:CDS |
TCCTGAATTGACTGAGATGC+AGG | 0.481091 | 8.1:-9343840 | MS.gene035259:CDS |
TGCTGTTGTAGCCCGTGGAT+GGG | 0.481959 | 8.1:-9345205 | MS.gene035259:CDS |
AGAACTGTGTCCATCATTCC+AGG | 0.483639 | 8.1:+9347739 | None:intergenic |
AAGAATGATGTTAGTGTTGG+TGG | 0.484081 | 8.1:-9350847 | MS.gene035259:CDS |
TCAAGTTCCTTATAAGCATC+CGG | 0.489294 | 8.1:+9346718 | None:intergenic |
TTGTGGGAGGAGATACTTGA+AGG | 0.489564 | 8.1:-9348532 | MS.gene035259:CDS |
GGTGATTTAAATGAAATTGT+TGG | 0.491174 | 8.1:-9344348 | MS.gene035259:CDS |
ACATAATATCAGAAGGAGAA+TGG | 0.491862 | 8.1:-9345023 | MS.gene035259:CDS |
AGTGGAAAACGTACTGGTAA+AGG | 0.492046 | 8.1:-9346489 | MS.gene035259:CDS |
GAAAAGCTAAAGTATTCAAA+AGG | 0.493897 | 8.1:-9347401 | MS.gene035259:CDS |
CTGCCCAACTGCAGCTCCAG+GGG | 0.494906 | 8.1:+9345984 | None:intergenic |
AGTGGAAGGAGTTGCAGTTA+CGG | 0.497327 | 8.1:-9350804 | MS.gene035259:CDS |
AGAACCTACCAAATGGTTTG+TGG | 0.497544 | 8.1:-9348549 | MS.gene035259:CDS |
TTTGAAGTTAATCCCATGCT+TGG | 0.498251 | 8.1:-9344264 | MS.gene035259:CDS |
AACCAGATCTTTGAGATCGT+TGG | 0.499844 | 8.1:+9347352 | None:intergenic |
TAATTGTAGTTGGGAGGAAA+GGG | 0.500634 | 8.1:-9348667 | MS.gene035259:intron |
AGCCAACGATCTCAAAGATC+TGG | 0.501318 | 8.1:-9347354 | MS.gene035259:CDS |
TGAGGTGATACTTGGAAAGC+AGG | 0.501601 | 8.1:-9344977 | MS.gene035259:CDS |
TAGTAAGAGGCATAGTCATA+AGG | 0.501956 | 8.1:-9350909 | MS.gene035259:CDS |
AATCAAAATAGCTGTAGATA+TGG | 0.503273 | 8.1:-9346463 | MS.gene035259:CDS |
GCAAAGAATGCAACAGAAGA+AGG | 0.504771 | 8.1:+9342523 | None:intergenic |
GGAGAATGGATCTCGTTGAA+TGG | 0.505652 | 8.1:-9345009 | MS.gene035259:CDS |
GAACCTACCAAATGGTTTGT+GGG | 0.508102 | 8.1:-9348548 | MS.gene035259:CDS |
TTTGCAGCATGATCCATTTG+AGG | 0.509567 | 8.1:-9343094 | MS.gene035259:intron |
TCCACTCATCGGTACACCTC+AGG | 0.510064 | 8.1:-9343747 | MS.gene035259:intron |
CTTCCTACATACCTATCCGC+AGG | 0.510814 | 8.1:-9343120 | MS.gene035259:CDS |
TCTGCAACTAGTGCAGCTCT+TGG | 0.512618 | 8.1:+9343365 | None:intergenic |
CCAAGTAAACGACCATGAAA+AGG | 0.515296 | 8.1:-9345151 | MS.gene035259:intron |
CACAACACTTTCCCCATCCA+CGG | 0.517943 | 8.1:+9345193 | None:intergenic |
AGCAGCTTGGAAAACGGCAC+GGG | 0.518749 | 8.1:+9343817 | None:intergenic |
CTAACAACCGGATTGTTACT+GGG | 0.520228 | 8.1:+9344400 | None:intergenic |
TCAATTCTTGGGATAGCCCA+AGG | 0.520836 | 8.1:-9347141 | MS.gene035259:CDS |
TGAATGATGAAGTGGTTGCT+GGG | 0.521032 | 8.1:-9347705 | MS.gene035259:CDS |
CACCAGAGCGCACAGAGAGG+AGG | 0.524479 | 8.1:+9348452 | None:intergenic |
CTGCTGAAGCTGCCGAACAA+TGG | 0.524989 | 8.1:-9345951 | MS.gene035259:CDS |
ATATATCAGATTTCCATGCC+TGG | 0.525782 | 8.1:-9347757 | MS.gene035259:intron |
TGTCATTTGGGTAAGGTCGT+TGG | 0.526879 | 8.1:+9343176 | None:intergenic |
CTCTGTGCGCTCTGGTGCTG+CGG | 0.527367 | 8.1:-9348446 | MS.gene035259:intron |
TGAAATAGCAGCTTGGAAAA+CGG | 0.532518 | 8.1:+9343811 | None:intergenic |
AATGAAAAGAACCTACCAAA+TGG | 0.534270 | 8.1:-9348556 | MS.gene035259:CDS |
GAAGTGGAGGATCTAACAAC+CGG | 0.535317 | 8.1:+9344388 | None:intergenic |
AAAGCAGGCACTTTCTCCTC+CGG | 0.536936 | 8.1:-9344962 | MS.gene035259:CDS |
ATCTCGTTGAATGGATCCAC+AGG | 0.538595 | 8.1:-9345000 | MS.gene035259:CDS |
AAACAAGGCCATGAAGTCCT+TGG | 0.538622 | 8.1:-9348830 | MS.gene035259:intron |
AAGGACAAAGTGGTTGCCAC+TGG | 0.539776 | 8.1:-9346018 | MS.gene035259:CDS |
GAGAAAGTGTTCTCTGAGAT+GGG | 0.540276 | 8.1:-9343428 | MS.gene035259:CDS |
GCAGCTCAATTTGCAGCGTA+AGG | 0.540463 | 8.1:-9342298 | None:intergenic |
CCCAAATCATCGCTTAGAGC+CGG | 0.541613 | 8.1:+9344943 | None:intergenic |
GAGATAATGGTTCCACTCAT+CGG | 0.542002 | 8.1:-9343758 | MS.gene035259:CDS |
GCCCAAGGGCTAATAAGTAT+AGG | 0.543811 | 8.1:-9347126 | MS.gene035259:CDS |
AACCAAATGTCATTTGGGTA+AGG | 0.544430 | 8.1:+9343169 | None:intergenic |
AGCTGTAGATATGGTCAATG+AGG | 0.545269 | 8.1:-9346454 | MS.gene035259:CDS |
ATGGTCGTTTACTTGGATGT+CGG | 0.545344 | 8.1:+9345158 | None:intergenic |
CGTTTCTTAGACATGTTTGG+AGG | 0.547428 | 8.1:-9347637 | MS.gene035259:CDS |
GAATCATTACAAGGATATGA+TGG | 0.551273 | 8.1:-9346674 | MS.gene035259:intron |
CCTGCCCAACTGCAGCTCCA+GGG | 0.551694 | 8.1:+9345983 | None:intergenic |
TATTCGTTCTGCAATCAAGA+TGG | 0.555466 | 8.1:-9346421 | MS.gene035259:CDS |
GCAATAGCAGCTAGACAAAA+CGG | 0.556137 | 8.1:-9344752 | MS.gene035259:CDS |
TAATCAGATAACTGGACTAG+TGG | 0.556974 | 8.1:-9347098 | MS.gene035259:CDS |
AGCCAATATCATCATTCTCA+CGG | 0.557183 | 8.1:+9344515 | None:intergenic |
AGCTGCACTAGTTGCAGATG+AGG | 0.560078 | 8.1:-9343360 | MS.gene035259:intron |
ATGGTCTCCCAGTAACAATC+CGG | 0.560105 | 8.1:-9344407 | MS.gene035259:CDS |
TGTCGAAGTGGAAAACGTAC+TGG | 0.564174 | 8.1:-9346495 | MS.gene035259:CDS |
AAGAAGAAGAAATAGTCTCT+AGG | 0.566694 | 8.1:-9344299 | MS.gene035259:CDS |
GCTGTTGTAGCCCGTGGATG+GGG | 0.568721 | 8.1:-9345204 | MS.gene035259:CDS |
TGCCGTAAACATTCAATCCA+TGG | 0.569861 | 8.1:-9347071 | MS.gene035259:CDS |
GCTGCTGCAAGTCTAGCAAT+CGG | 0.570121 | 8.1:+9342316 | None:intergenic |
ATTTGTTGAAAATGAAATGG+AGG | 0.571551 | 8.1:-9348503 | MS.gene035259:CDS |
TTCTCCTCAAACAATGAATG+TGG | 0.573157 | 8.1:+9347428 | None:intergenic |
TTTGGCAAAGGTAAAAGTGA+AGG | 0.573553 | 8.1:-9348853 | MS.gene035259:CDS |
TCACTAGAAATCCAAGCACT+GGG | 0.573756 | 8.1:-9347006 | MS.gene035259:CDS |
TCATACTAATCTGACCTGAA+TGG | 0.573986 | 8.1:+9342469 | None:intergenic |
TGTGTCCATCATTCCAGGCA+TGG | 0.575045 | 8.1:+9347744 | None:intergenic |
GACCATGAAAACTTGCATGC+CGG | 0.575358 | 8.1:-9346737 | MS.gene035259:CDS |
AAGGGAGAAAAGTTTCCCTC+AGG | 0.576363 | 8.1:-9347299 | MS.gene035259:intron |
ATGATAGGTGGTTGTAATTG+GGG | 0.576454 | 8.1:-9345049 | MS.gene035259:intron |
GCTAGACAAAACGGTGCGCA+AGG | 0.576960 | 8.1:-9344743 | MS.gene035259:CDS |
TCAGGAAGAAATTCATGAAG+TGG | 0.578057 | 8.1:+9344372 | None:intergenic |
GCAGCCACGAAAACCAAGCA+TGG | 0.580063 | 8.1:+9344251 | None:intergenic |
TCTGTTGATATAGTGAGTCC+AGG | 0.580190 | 8.1:+9348601 | None:intergenic |
ATCCCTGCGGATAGGTATGT+AGG | 0.580219 | 8.1:+9343117 | None:intergenic |
GCTGCAAAATCCCTGCGGAT+AGG | 0.585813 | 8.1:+9343109 | None:intergenic |
TCTTCATTAAGCTATAAGGT+TGG | 0.586617 | 8.1:-9343404 | MS.gene035259:CDS |
AAGTACAAAGGTGCAGTGGA+AGG | 0.586751 | 8.1:-9350818 | MS.gene035259:CDS |
TCCAAGTATCACCTCACCTG+TGG | 0.588151 | 8.1:+9344984 | None:intergenic |
CTGTTCAGGAAAATAGATTG+TGG | 0.588451 | 8.1:-9346527 | MS.gene035259:CDS |
GCTGTAGATATGGTCAATGA+GGG | 0.588831 | 8.1:-9346453 | MS.gene035259:CDS |
GAGTAAGGATAGTTTGGGCA+CGG | 0.590655 | 8.1:+9350731 | None:intergenic |
AGGTAAAAGTGAAGGAAACA+AGG | 0.590908 | 8.1:-9348845 | MS.gene035259:CDS |
CATGCTGCTGTTGTAGCCCG+TGG | 0.591629 | 8.1:-9345210 | MS.gene035259:CDS |
GCTATTTCAGTGAGTAGCCA+TGG | 0.591843 | 8.1:-9343797 | MS.gene035259:CDS |
GGGGATAACATAATATCAGA+AGG | 0.591935 | 8.1:-9345030 | MS.gene035259:CDS |
GGTGAACTAACTTCTCAGAC+AGG | 0.596053 | 8.1:-9344327 | MS.gene035259:CDS |
AGTGTCTACCTCGAAGCTAA+GGG | 0.598429 | 8.1:-9347317 | MS.gene035259:CDS |
GAAGAAGTACAAAGGTGCAG+TGG | 0.598582 | 8.1:-9350822 | MS.gene035259:CDS |
GATTCTAGAGAATCATTACA+AGG | 0.598884 | 8.1:-9346683 | MS.gene035259:CDS |
CAATTCTTGGGATAGCCCAA+GGG | 0.599592 | 8.1:-9347140 | MS.gene035259:CDS |
GTTGGAATATGTGGAGAGCA+TGG | 0.600312 | 8.1:-9342553 | MS.gene035259:CDS |
CCTCCCACAAACCATTTGGT+AGG | 0.601228 | 8.1:+9348545 | None:intergenic |
TCCCATATTACCAAACACCA+TGG | 0.602032 | 8.1:+9347054 | None:intergenic |
GAGCGCACAGAGAGGAGGAG+AGG | 0.602197 | 8.1:+9348457 | None:intergenic |
GCCGAACAATGGCATGCACA+AGG | 0.602710 | 8.1:-9345940 | MS.gene035259:CDS |
AACAAGAATGATGTTAGTGT+TGG | 0.604067 | 8.1:-9350850 | MS.gene035259:CDS |
TCTTGGATTGAATGATGAAG+TGG | 0.606505 | 8.1:-9347713 | MS.gene035259:CDS |
TGATCAGCTCCTACACCCAC+AGG | 0.609765 | 8.1:-9346382 | MS.gene035259:intron |
TACTCACTGAAATAGCAGCT+TGG | 0.609929 | 8.1:+9343804 | None:intergenic |
ATCTAAGTACAAGGACAAAG+TGG | 0.610286 | 8.1:-9346028 | MS.gene035259:CDS |
GTGGAACCATTATCTCTGGA+AGG | 0.611076 | 8.1:+9343765 | None:intergenic |
GAGACAAGTCCAGAGGATGT+CGG | 0.612900 | 8.1:-9345285 | MS.gene035259:CDS |
GTGTGTTAATTGTAGTTGGG+AGG | 0.613934 | 8.1:-9348673 | MS.gene035259:intron |
AATCAGATAACTGGACTAGT+GGG | 0.613941 | 8.1:-9347097 | MS.gene035259:CDS |
GGAAGAAATTCATGAAGTGG+AGG | 0.614194 | 8.1:+9344375 | None:intergenic |
TGAGGATCCATCTAAGTACA+AGG | 0.615147 | 8.1:-9346037 | MS.gene035259:CDS |
CAGCCACGAAAACCAAGCAT+GGG | 0.615672 | 8.1:+9344252 | None:intergenic |
ACAACACTTTCCCCATCCAC+GGG | 0.616402 | 8.1:+9345194 | None:intergenic |
GACAAGTCCAGAGGATGTCG+GGG | 0.618218 | 8.1:-9345283 | MS.gene035259:CDS |
AAGCATATACCTGTGGGTGT+AGG | 0.618227 | 8.1:+9346373 | None:intergenic |
CTGCAGGTACTTGACCAGAA+AGG | 0.619999 | 8.1:-9342758 | MS.gene035259:intron |
TAGCAGCTTGGAAAACGGCA+CGG | 0.620165 | 8.1:+9343816 | None:intergenic |
AGGAGCTGATCAAGATGTTG+TGG | 0.628878 | 8.1:+9346393 | None:intergenic |
TTCCTACATACCTATCCGCA+GGG | 0.630523 | 8.1:-9343119 | MS.gene035259:CDS |
GGATGCTTATAAGGAACTTG+AGG | 0.631062 | 8.1:-9346716 | MS.gene035259:CDS |
GTTGGCATCTTGACAGCTAG+AGG | 0.632776 | 8.1:-9345246 | MS.gene035259:CDS |
GGTACTTGACCAGAAAGGTG+TGG | 0.634510 | 8.1:-9342753 | MS.gene035259:CDS |
GTACTTGACCAGAAAGGTGT+GGG | 0.637870 | 8.1:-9342752 | MS.gene035259:CDS |
AGAATGATGTTAGTGTTGGT+GGG | 0.642242 | 8.1:-9350846 | MS.gene035259:CDS |
GCCTGAGGTGTACCGATGAG+TGG | 0.642967 | 8.1:+9343746 | None:intergenic |
AGGGGATGCAGGCAAACCAG+TGG | 0.643058 | 8.1:+9346002 | None:intergenic |
ACTTTGCAGGACAGAACACA+TGG | 0.645120 | 8.1:-9344714 | MS.gene035259:intron |
TGATGAAATAAGGAATCTGA+AGG | 0.648348 | 8.1:-9344902 | MS.gene035259:intron |
GGAATATGTGGAGAGCATGG+CGG | 0.649381 | 8.1:-9342550 | MS.gene035259:CDS |
CTGGAAGGACTGTAATACCA+TGG | 0.650829 | 8.1:+9343780 | None:intergenic |
AAATCATCGCTTAGAGCCGG+AGG | 0.654508 | 8.1:+9344946 | None:intergenic |
CAGCACCAGAGCGCACAGAG+AGG | 0.669098 | 8.1:+9348449 | None:intergenic |
GGCATCTTGACAGCTAGAGG+TGG | 0.670250 | 8.1:-9345243 | MS.gene035259:CDS |
AAGGACAGAGACAAGTCCAG+AGG | 0.685240 | 8.1:-9345292 | MS.gene035259:CDS |
TGGCTATTACGCAAGAACAG+AGG | 0.687603 | 8.1:-9344497 | MS.gene035259:CDS |
GTTGAATGGATCCACAGGTG+AGG | 0.695332 | 8.1:-9344995 | MS.gene035259:CDS |
TGGATGTTGCAATGTCGAAG+TGG | 0.695711 | 8.1:-9346507 | MS.gene035259:CDS |
CTGTAGATATGGTCAATGAG+GGG | 0.699069 | 8.1:-9346452 | MS.gene035259:CDS |
CCTACCAAATGGTTTGTGGG+AGG | 0.699192 | 8.1:-9348545 | MS.gene035259:CDS |
AATATGTGGAGAGCATGGCG+GGG | 0.702583 | 8.1:-9342548 | MS.gene035259:CDS |
TGGTGGGAGAAGAAGTACAA+AGG | 0.710183 | 8.1:-9350830 | MS.gene035259:CDS |
ACAAGTCCAGAGGATGTCGG+GGG | 0.714831 | 8.1:-9345282 | MS.gene035259:CDS |
CACTAGAAATCCAAGCACTG+GGG | 0.715102 | 8.1:-9347005 | MS.gene035259:CDS |
TGGGGAAAAGAAACTTTATG+GGG | 0.717321 | 8.1:-9346987 | MS.gene035259:CDS |
GTTGATATAGTGAGTCCAGG+AGG | 0.729602 | 8.1:+9348604 | None:intergenic |
AGTTACGGCTTACATCAACA+TGG | 0.736612 | 8.1:-9350789 | MS.gene035259:CDS |
ATCATGCTGCAAAATCCCTG+CGG | 0.765148 | 8.1:+9343104 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 9342300 | 9350941 | 9342300 | ID=MS.gene035259 |
chr8.1 | mRNA | 9342300 | 9350941 | 9342300 | ID=MS.gene035259.t1;Parent=MS.gene035259 |
chr8.1 | exon | 9350705 | 9350941 | 9350705 | ID=MS.gene035259.t1.exon1;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9350705 | 9350941 | 9350705 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9348831 | 9348887 | 9348831 | ID=MS.gene035259.t1.exon2;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9348831 | 9348887 | 9348831 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9348447 | 9348680 | 9348447 | ID=MS.gene035259.t1.exon3;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9348447 | 9348680 | 9348447 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9347633 | 9347770 | 9347633 | ID=MS.gene035259.t1.exon4;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9347633 | 9347770 | 9347633 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9347300 | 9347462 | 9347300 | ID=MS.gene035259.t1.exon5;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9347300 | 9347462 | 9347300 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9346967 | 9347202 | 9346967 | ID=MS.gene035259.t1.exon6;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9346967 | 9347202 | 9346967 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9346675 | 9346803 | 9346675 | ID=MS.gene035259.t1.exon7;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9346675 | 9346803 | 9346675 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9346383 | 9346562 | 9346383 | ID=MS.gene035259.t1.exon8;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9346383 | 9346562 | 9346383 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9345924 | 9346061 | 9345924 | ID=MS.gene035259.t1.exon9;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9345924 | 9346061 | 9345924 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9345152 | 9345316 | 9345152 | ID=MS.gene035259.t1.exon10;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9345152 | 9345316 | 9345152 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9344903 | 9345064 | 9344903 | ID=MS.gene035259.t1.exon11;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9344903 | 9345064 | 9344903 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9344715 | 9344804 | 9344715 | ID=MS.gene035259.t1.exon12;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9344715 | 9344804 | 9344715 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9344249 | 9344565 | 9344249 | ID=MS.gene035259.t1.exon13;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9344249 | 9344565 | 9344249 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9343748 | 9343877 | 9343748 | ID=MS.gene035259.t1.exon14;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9343748 | 9343877 | 9343748 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9343361 | 9343489 | 9343361 | ID=MS.gene035259.t1.exon15;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9343361 | 9343489 | 9343361 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9343095 | 9343232 | 9343095 | ID=MS.gene035259.t1.exon16;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9343095 | 9343232 | 9343095 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9342697 | 9342774 | 9342697 | ID=MS.gene035259.t1.exon17;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9342697 | 9342774 | 9342697 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9342484 | 9342575 | 9342484 | ID=MS.gene035259.t1.exon18;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9342484 | 9342575 | 9342484 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
chr8.1 | exon | 9342300 | 9342342 | 9342300 | ID=MS.gene035259.t1.exon19;Parent=MS.gene035259.t1 |
chr8.1 | CDS | 9342300 | 9342342 | 9342300 | ID=cds.MS.gene035259.t1;Parent=MS.gene035259.t1 |
Gene Sequence |
Protein sequence |