AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035406


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035406.t1 MTR_8g442750 96.689 302 9 1 1 302 1 301 0.0 592
MS.gene035406.t1 MTR_4g064887 31.274 259 158 7 14 266 15 259 3.98e-25 101
MS.gene035406.t1 MTR_7g113650 30.147 272 158 9 9 265 34 288 3.16e-23 97.1
MS.gene035406.t1 MTR_7g063270 29.845 258 166 6 14 266 16 263 3.67e-23 96.3
MS.gene035406.t1 MTR_4g132850 30.469 256 167 3 11 266 4 248 1.00e-22 95.1
MS.gene035406.t1 MTR_4g131740 31.203 266 161 9 14 269 40 293 3.43e-22 94.4
MS.gene035406.t1 MTR_1g082760 29.323 266 168 6 9 265 34 288 8.47e-22 93.2
MS.gene035406.t1 MTR_4g064883 29.528 254 169 5 14 266 14 258 3.37e-21 91.3
MS.gene035406.t1 MTR_7g063260 28.409 264 161 7 14 265 16 263 7.78e-21 90.1
MS.gene035406.t1 MTR_3g068070 29.008 262 160 9 14 266 15 259 7.94e-21 90.1
MS.gene035406.t1 MTR_3g068065 28.517 263 160 11 14 266 17 261 1.31e-20 89.7
MS.gene035406.t1 MTR_3g068155 29.771 262 158 10 14 266 19 263 3.93e-20 88.2
MS.gene035406.t1 MTR_7g071680 30.314 287 172 8 4 270 19 297 4.29e-20 88.6
MS.gene035406.t1 MTR_3g068175 29.771 262 158 10 14 266 17 261 9.22e-20 87.4
MS.gene035406.t1 MTR_4g052350 30.970 268 150 10 14 268 14 259 2.69e-19 85.9
MS.gene035406.t1 MTR_7g063330 28.137 263 164 8 14 266 15 262 3.64e-19 85.5
MS.gene035406.t1 MTR_7g063320 27.839 273 157 8 14 268 15 265 4.13e-19 85.5
MS.gene035406.t1 MTR_4g052320 30.292 274 145 9 14 268 8 254 4.19e-19 85.5
MS.gene035406.t1 MTR_1196s0010 30.588 255 157 8 17 268 277 514 6.35e-19 87.0
MS.gene035406.t1 MTR_3g068085 28.462 260 164 8 14 266 15 259 6.83e-19 84.7
MS.gene035406.t1 MTR_4g052300 29.078 282 155 9 14 277 8 262 9.29e-19 84.3
MS.gene035406.t1 MTR_3g085740 28.674 279 161 8 3 268 67 320 1.40e-18 84.7
MS.gene035406.t1 MTR_7g063390 27.957 279 173 9 1 266 1 264 1.83e-18 83.6
MS.gene035406.t1 MTR_3g068175 29.389 262 163 10 14 266 17 265 3.08e-18 83.2
MS.gene035406.t1 MTR_7g094510 30.000 260 162 9 14 265 6 253 3.25e-18 82.8
MS.gene035406.t1 MTR_3g020670 30.851 282 158 11 3 266 7 269 7.53e-18 82.0
MS.gene035406.t1 MTR_4g052340 29.588 267 159 8 14 270 14 261 1.62e-17 80.9
MS.gene035406.t1 MTR_7g063360 27.817 284 167 10 1 266 1 264 5.99e-17 79.3
MS.gene035406.t1 MTR_8g096620 31.390 223 138 5 9 228 40 250 7.88e-17 80.1
MS.gene035406.t1 MTR_8g096580 33.168 202 115 6 12 207 43 230 1.22e-16 79.3
MS.gene035406.t1 MTR_4g064887 32.500 200 115 7 14 207 15 200 2.85e-16 76.6
MS.gene035406.t1 MTR_4g058840 29.885 261 164 10 14 265 11 261 4.87e-16 77.0
MS.gene035406.t1 MTR_4g058820 29.885 261 164 10 14 265 11 261 4.87e-16 77.0
MS.gene035406.t1 MTR_1g068955 30.797 276 164 9 1 264 1 261 1.06e-15 76.3
MS.gene035406.t1 MTR_7g105460 28.881 277 157 11 14 273 13 266 1.19e-15 75.9
MS.gene035406.t1 MTR_7g105580 30.769 260 140 11 14 265 8 235 5.71e-15 73.6
MS.gene035406.t1 MTR_4g078630 29.268 287 161 11 1 266 5 270 2.67e-14 72.0
MS.gene035406.t1 MTR_2g090165 28.253 269 172 11 14 275 6 260 3.27e-14 71.6
MS.gene035406.t1 MTR_7g110160 27.675 271 161 10 14 279 6 246 3.80e-14 71.2
MS.gene035406.t1 MTR_4g064883 30.769 195 125 5 14 207 14 199 1.50e-13 68.9
MS.gene035406.t1 MTR_1g051165 28.674 279 172 12 6 268 5 272 1.83e-13 69.7
MS.gene035406.t1 MTR_7g110140 29.740 269 171 9 14 275 6 263 3.25e-13 68.6
MS.gene035406.t1 MTR_7g083870 29.151 271 155 12 14 266 35 286 6.96e-13 68.2
MS.gene035406.t1 MTR_7g105590 30.457 197 124 5 14 208 8 193 7.40e-13 66.6
MS.gene035406.t1 MTR_7g110130 26.641 259 173 9 14 266 6 253 5.46e-12 65.1
MS.gene035406.t1 MTR_7g063270 36.082 97 56 3 174 266 120 214 2.26e-11 62.8
MS.gene035406.t1 MTR_3g098470 29.054 148 97 2 15 162 33 172 6.34e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035406.t1 AT3G12800 76.510 298 68 2 6 302 2 298 4.52e-157 440
MS.gene035406.t1 AT2G07640 75.333 150 36 1 132 280 1 150 1.07e-69 213
MS.gene035406.t1 AT3G05260 31.022 274 168 8 5 269 27 288 1.53e-26 106
MS.gene035406.t1 AT1G54870 30.769 260 161 6 14 265 82 330 6.46e-26 105
MS.gene035406.t1 AT1G54870 30.769 260 161 6 14 265 84 332 7.15e-26 105
MS.gene035406.t1 AT1G63380 31.679 262 159 10 14 265 15 266 2.56e-24 99.8
MS.gene035406.t1 AT1G63380 31.679 262 159 10 14 265 19 270 2.83e-24 99.8
MS.gene035406.t1 AT1G63380 31.679 262 159 10 14 265 22 273 2.84e-24 100
MS.gene035406.t1 AT1G63380 31.679 262 159 10 14 265 17 268 3.15e-24 99.8
MS.gene035406.t1 AT2G17845 33.962 265 151 11 14 265 47 300 5.28e-24 99.8
MS.gene035406.t1 AT1G36580 68.254 63 20 0 229 291 1 63 1.03e-23 96.3
MS.gene035406.t1 AT4G05530 30.469 256 167 2 11 266 6 250 1.67e-23 97.1
MS.gene035406.t1 AT1G52340 31.522 276 161 10 14 273 18 281 1.40e-22 95.1
MS.gene035406.t1 AT1G62610 31.298 262 160 10 14 265 14 265 2.56e-22 94.4
MS.gene035406.t1 AT1G62610 31.298 262 160 10 14 265 15 266 2.74e-22 94.4
MS.gene035406.t1 AT1G62610 31.298 262 160 10 14 265 19 270 2.78e-22 94.4
MS.gene035406.t1 AT1G62610 31.298 262 160 10 14 265 13 264 2.93e-22 94.4
MS.gene035406.t1 AT2G29150 28.846 260 160 7 14 265 16 258 2.43e-21 91.7
MS.gene035406.t1 AT2G29290 30.451 266 169 9 14 275 7 260 4.54e-21 90.9
MS.gene035406.t1 AT5G50600 32.487 197 122 3 12 207 43 229 1.30e-20 90.9
MS.gene035406.t1 AT5G50700 32.487 197 122 3 12 207 43 229 1.30e-20 90.9
MS.gene035406.t1 AT2G29260 29.688 256 166 6 14 266 68 312 1.60e-20 90.1
MS.gene035406.t1 AT3G55310 32.584 267 149 12 14 265 17 267 2.73e-20 89.0
MS.gene035406.t1 AT3G55290 32.700 263 154 11 14 265 18 268 4.45e-20 88.2
MS.gene035406.t1 AT3G55290 32.700 263 154 11 14 265 17 267 4.80e-20 88.2
MS.gene035406.t1 AT5G18210 30.798 263 161 9 14 266 8 259 5.82e-20 87.8
MS.gene035406.t1 AT2G29370 27.734 256 171 6 14 266 16 260 1.01e-19 87.0
MS.gene035406.t1 AT2G29360 28.519 270 169 9 14 275 16 269 1.07e-19 87.0
MS.gene035406.t1 AT3G46170 33.333 267 147 11 14 265 26 276 1.23e-19 87.4
MS.gene035406.t1 AT1G07440 28.889 270 169 8 14 276 12 265 3.78e-19 85.5
MS.gene035406.t1 AT2G29310 28.676 272 168 10 14 276 7 261 4.47e-19 85.1
MS.gene035406.t1 AT5G06060 27.820 266 178 6 14 276 9 263 4.85e-19 85.1
MS.gene035406.t1 AT3G51680 30.877 285 169 10 5 270 23 298 7.30e-19 85.5
MS.gene035406.t1 AT2G29340 29.391 279 181 7 14 289 7 272 1.31e-18 84.7
MS.gene035406.t1 AT3G04000 29.474 285 171 9 1 268 1 272 3.81e-18 82.8
MS.gene035406.t1 AT2G29350 27.099 262 162 8 14 265 15 257 5.01e-18 82.4
MS.gene035406.t1 AT2G29320 27.715 267 176 6 14 275 13 267 6.75e-18 82.0
MS.gene035406.t1 AT2G29330 30.545 275 157 10 14 275 7 260 1.17e-17 81.3
MS.gene035406.t1 AT4G13180 29.057 265 160 10 14 266 13 261 2.37e-17 80.5
MS.gene035406.t1 AT2G29340 28.947 266 175 6 14 276 7 261 2.47e-17 80.5
MS.gene035406.t1 AT4G03140 29.670 273 168 6 14 275 78 337 4.38e-17 80.9
MS.gene035406.t1 AT3G26770 26.394 269 165 9 14 266 41 292 4.96e-17 80.1
MS.gene035406.t1 AT1G07450 27.407 270 171 8 14 275 8 260 1.27e-16 78.6
MS.gene035406.t1 AT2G30670 27.444 266 179 6 14 276 7 261 1.79e-16 78.2
MS.gene035406.t1 AT5G18210 31.154 260 156 10 14 261 8 256 2.60e-16 77.8
MS.gene035406.t1 AT3G47350 32.338 201 119 5 12 208 42 229 6.38e-16 77.0
MS.gene035406.t1 AT2G47140 28.679 265 169 10 14 271 6 257 7.35e-16 76.3
MS.gene035406.t1 AT3G47350 32.338 201 119 5 12 208 42 229 9.28e-16 76.6
MS.gene035406.t1 AT1G24360 28.148 270 172 7 1 268 70 319 1.84e-15 75.9
MS.gene035406.t1 AT2G29290 28.980 245 158 9 35 275 11 243 2.77e-15 74.3
MS.gene035406.t1 AT2G47130 28.519 270 162 11 14 271 6 256 3.76e-15 74.3
MS.gene035406.t1 AT3G47360 29.534 193 125 4 17 208 48 230 5.10e-15 74.7
MS.gene035406.t1 AT2G29300 26.792 265 163 9 14 266 7 252 6.32e-15 73.6
MS.gene035406.t1 AT2G29300 26.792 265 163 9 14 266 7 252 6.56e-15 73.9
MS.gene035406.t1 AT2G47120 28.102 274 157 11 14 271 7 256 7.45e-15 73.6
MS.gene035406.t1 AT2G47120 28.102 274 157 11 14 271 6 255 8.94e-15 73.2
MS.gene035406.t1 AT5G50770 34.343 198 113 5 12 205 43 227 1.05e-14 73.9
MS.gene035406.t1 AT3G26760 27.372 274 176 8 14 275 36 298 1.61e-14 73.2
MS.gene035406.t1 AT4G10020 28.283 198 125 4 7 199 40 225 2.56e-14 73.2
MS.gene035406.t1 AT3G29250 29.259 270 155 12 12 266 42 290 7.13e-14 71.2
MS.gene035406.t1 AT3G29250 29.044 272 157 12 14 270 6 256 1.73e-13 69.3
MS.gene035406.t1 AT3G29250 29.478 268 153 12 14 266 42 288 3.59e-13 68.9
MS.gene035406.t1 AT2G29350 25.424 236 147 8 40 265 3 219 2.70e-12 65.5
MS.gene035406.t1 AT3G42960 29.699 266 153 11 17 265 11 259 2.93e-12 66.2
MS.gene035406.t1 AT3G29260 29.699 266 152 13 14 265 6 250 5.64e-12 65.1
MS.gene035406.t1 AT2G29310 26.172 256 163 10 30 276 21 259 9.10e-12 64.7
MS.gene035406.t1 AT3G47350 36.893 103 64 1 12 113 42 144 9.56e-12 64.7
MS.gene035406.t1 AT3G03980 27.206 272 167 11 11 265 11 268 1.61e-11 63.9
MS.gene035406.t1 AT5G50690 28.141 199 132 3 12 209 43 231 5.83e-11 62.8
MS.gene035406.t1 AT5G50590 28.141 199 132 3 12 209 43 231 5.83e-11 62.8
MS.gene035406.t1 AT2G29320 25.296 253 168 8 30 275 11 249 6.96e-11 62.0
MS.gene035406.t1 AT5G50690 33.333 132 87 1 12 142 43 174 8.02e-11 61.6
MS.gene035406.t1 AT5G50590 33.333 132 87 1 12 142 43 174 8.02e-11 61.6

Find 85 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACCAATTGGTTCATTTC+TGG 0.141423 8.2:-52672813 None:intergenic
CGCTTTCGATTCCTGCTGTT+GGG 0.266199 8.2:+52668933 MS.gene035406:CDS
ATTAGTGCTACCTTGCATTA+TGG 0.276429 8.2:+52670411 MS.gene035406:CDS
ATGCCAGGAGTGTCACTTAT+TGG 0.283238 8.2:-52670775 None:intergenic
CCTTGCATTATGGAGCTTCT+TGG 0.293806 8.2:+52670421 MS.gene035406:CDS
ACTGGCGGAGCGTCGGGAAT+TGG 0.320337 8.2:+52668812 MS.gene035406:CDS
TTCAAACCAGAAATCTTAAA+AGG 0.320970 8.2:+52668773 MS.gene035406:CDS
GGCAAAGTAGCTTTAATAAC+TGG 0.335212 8.2:+52668794 MS.gene035406:CDS
TGTATAAACTTGGGGAGAAA+TGG 0.343265 8.2:+52670851 MS.gene035406:CDS
CCTCTGCTACCTATTTCTTC+AGG 0.344151 8.2:-52670811 None:intergenic
AAGAAACTTGGCACTGGAAT+GGG 0.348357 8.2:+52670711 MS.gene035406:CDS
ATTCCTGCTGTTGGGTTTGA+AGG 0.357334 8.2:+52668941 MS.gene035406:CDS
GTTTGAAATATCAACGCAAT+TGG 0.363203 8.2:+52668835 MS.gene035406:CDS
ACCTGTCTCACTGCCTCCTT+TGG 0.366952 8.2:-52672767 None:intergenic
TTAATAACTGGCGGAGCGTC+GGG 0.374098 8.2:+52668806 MS.gene035406:CDS
AGTTCTTCAATCTGCTGTTT+CGG 0.377117 8.2:+52668901 MS.gene035406:CDS
TTTGAAATATCAACGCAATT+GGG 0.380854 8.2:+52668836 MS.gene035406:CDS
TCGCTTTCGATTCCTGCTGT+TGG 0.383020 8.2:+52668932 MS.gene035406:CDS
CTGAGGATCTTTCGCCGAAT+GGG 0.391331 8.2:+52669074 MS.gene035406:CDS
CTGGCGGAGCGTCGGGAATT+GGG 0.395868 8.2:+52668813 MS.gene035406:CDS
GATTATGATATTCGAGTCAA+TGG 0.397358 8.2:+52670739 MS.gene035406:CDS
TTCTGGTTTGAAGGGTGATT+CGG 0.401695 8.2:-52668762 None:intergenic
CACTCCTGGCATGAGTAAAC+TGG 0.411577 8.2:+52670786 MS.gene035406:CDS
AAACTGGCTCCTGAAGAAAT+AGG 0.417404 8.2:+52670802 MS.gene035406:CDS
TGTGAAGGAAAATACATTAA+CGG 0.419004 8.2:+52672692 MS.gene035406:intron
GTATAAACTTGGGGAGAAAT+GGG 0.441031 8.2:+52670852 MS.gene035406:CDS
ATGGAGGACTTTGGCTGAGC+CGG 0.441556 8.2:+52672732 MS.gene035406:CDS
TTTAATAACTGGCGGAGCGT+CGG 0.442410 8.2:+52668805 MS.gene035406:CDS
TGAAGGGGATGTGAGGAAGC+AGG 0.455697 8.2:+52668958 MS.gene035406:CDS
GCTGAGGATCTTTCGCCGAA+TGG 0.457228 8.2:+52669073 MS.gene035406:CDS
GGAGACACTATGATAGTTGA+TGG 0.460768 8.2:+52672713 MS.gene035406:CDS
ATTCTTGTTAATGCTGCTGC+TGG 0.464854 8.2:+52669034 MS.gene035406:CDS
CTCTTCTTAGCATCAGATGC+AGG 0.469651 8.2:+52670892 MS.gene035406:CDS
TTCCTGCTGTTGGGTTTGAA+GGG 0.470572 8.2:+52668942 MS.gene035406:CDS
GAAATGCCTCTGTATAAACT+TGG 0.470825 8.2:+52670841 MS.gene035406:CDS
CAGGGTCATATTAGGTGTAA+TGG 0.474492 8.2:+52669714 MS.gene035406:intron
CACTTAAGTATCTCAAGAAA+GGG 0.475461 8.2:+52670346 MS.gene035406:CDS
GCCAAAGGAGGCAGTGAGAC+AGG 0.476361 8.2:+52672766 MS.gene035406:CDS
AGATCCAGAAATGAACCAAT+TGG 0.476611 8.2:+52672809 MS.gene035406:CDS
CAAGAAACTTGGCACTGGAA+TGG 0.477594 8.2:+52670710 MS.gene035406:CDS
GCACTTAAGTATCTCAAGAA+AGG 0.480331 8.2:+52670345 MS.gene035406:CDS
TGGAGCGTCGGTAGCTGTGA+TGG 0.491004 8.2:+52668865 MS.gene035406:CDS
TTTAAGATTTCTGGTTTGAA+GGG 0.496175 8.2:-52668770 None:intergenic
TCACCAGTTCGAAACCCATT+CGG 0.500361 8.2:-52669088 None:intergenic
AAATGCCTCTGTATAAACTT+GGG 0.505018 8.2:+52670842 MS.gene035406:CDS
TGATTCTACTACAAGAAACT+TGG 0.507418 8.2:+52670699 MS.gene035406:CDS
CCGCTAGAAGAGTTCCTACC+AGG 0.507529 8.2:-52670372 None:intergenic
ATTATGATATTCGAGTCAAT+GGG 0.519870 8.2:+52670740 MS.gene035406:CDS
TGATAGTTGATGGAGGACTT+TGG 0.521104 8.2:+52672723 MS.gene035406:CDS
CTGGTAGGAACTCTTCTAGC+GGG 0.525188 8.2:+52670373 MS.gene035406:CDS
GGAGCCAGTTTACTCATGCC+AGG 0.525918 8.2:-52670790 None:intergenic
CGAGTCAATGGGATTGCACC+AGG 0.526292 8.2:+52670751 MS.gene035406:CDS
TACTACAAGAAACTTGGCAC+TGG 0.536669 8.2:+52670705 MS.gene035406:CDS
TTGGGTTTGAAGGGGATGTG+AGG 0.552630 8.2:+52668951 MS.gene035406:CDS
AATTCATGTATCTGCAGCAA+AGG 0.552785 8.2:+52670449 MS.gene035406:CDS
TATCTCAAGAAAGGGGCACC+TGG 0.556489 8.2:+52670354 MS.gene035406:CDS
TTCTTGTTAATGCTGCTGCT+GGG 0.557653 8.2:+52669035 MS.gene035406:CDS
TCCCCTTCAAACCCAACAGC+AGG 0.558276 8.2:-52668944 None:intergenic
CGGTAGCTGTGATGGGTCGT+CGG 0.565048 8.2:+52668873 MS.gene035406:CDS
TCAACGCAATTGGGGAAACA+TGG 0.567028 8.2:+52668845 MS.gene035406:CDS
GCCACGTTATTTGCCAAAGG+AGG 0.568351 8.2:+52672754 MS.gene035406:CDS
GGAGCGTCGGTAGCTGTGAT+GGG 0.573283 8.2:+52668866 MS.gene035406:CDS
TTGAAATATCAACGCAATTG+GGG 0.574459 8.2:+52668837 MS.gene035406:CDS
GGAGTGTCACTTATTGGACC+TGG 0.583283 8.2:-52670769 None:intergenic
TCCTGCTGTTGGGTTTGAAG+GGG 0.588047 8.2:+52668943 MS.gene035406:CDS
CCTGAAGAAATAGGTAGCAG+AGG 0.588385 8.2:+52670811 MS.gene035406:CDS
AGAAACTTGGCACTGGAATG+GGG 0.594972 8.2:+52670712 MS.gene035406:CDS
CCTTTGGCAAATAACGTGGC+CGG 0.597655 8.2:-52672751 None:intergenic
CCGGCCACGTTATTTGCCAA+AGG 0.598200 8.2:+52672751 MS.gene035406:CDS
TCAAGAAAGGGGCACCTGGT+AGG 0.602664 8.2:+52670358 MS.gene035406:CDS
AATGCCTCTGTATAAACTTG+GGG 0.607132 8.2:+52670843 MS.gene035406:CDS
CCAAGAAGCTCCATAATGCA+AGG 0.608499 8.2:-52670421 None:intergenic
TGTGAGGAAGCAGGAAGATG+CGG 0.618720 8.2:+52668967 MS.gene035406:CDS
TTCTCCCCAAGTTTATACAG+AGG 0.622115 8.2:-52670847 None:intergenic
TGGTAGGAACTCTTCTAGCG+GGG 0.631175 8.2:+52670374 MS.gene035406:CDS
GCCTCCTTTGGCAAATAACG+TGG 0.635341 8.2:-52672755 None:intergenic
GGTCCAATAAGTGACACTCC+TGG 0.636505 8.2:+52670772 MS.gene035406:CDS
GGAGAAATGGGATATTGCAA+TGG 0.644314 8.2:+52670864 MS.gene035406:CDS
ATTGGGGAAACATGGAGCGT+CGG 0.649592 8.2:+52668853 MS.gene035406:CDS
CCTGGTAGGAACTCTTCTAG+CGG 0.661737 8.2:+52670372 MS.gene035406:CDS
GGTAGGAACTCTTCTAGCGG+GGG 0.665696 8.2:+52670375 MS.gene035406:CDS
GTGTTGGATATCGATTCTGT+TGG 0.666144 8.2:+52670300 MS.gene035406:intron
AAAGTAGCTTTAATAACTGG+CGG 0.668949 8.2:+52668797 MS.gene035406:CDS
ACTTAAGTATCTCAAGAAAG+GGG 0.678718 8.2:+52670347 MS.gene035406:CDS
GACACTATGATAGTTGATGG+AGG 0.683950 8.2:+52672716 MS.gene035406:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCATCTTTTTAATTTA+AGG + chr8.2:52670499-52670518 MS.gene035406:intron 10.0%
!!! ATTTTTTATTTATTTGTCTA+TGG + chr8.2:52672648-52672667 MS.gene035406:intron 10.0%
!!! TTTTTAATTTAAGGATTTAA+AGG + chr8.2:52670508-52670527 MS.gene035406:intron 10.0%
!! AAAAAAAAAAGGTAAAGATT+TGG - chr8.2:52672297-52672316 None:intergenic 15.0%
!! AAAAAAAAAGGTAAAGATTT+GGG - chr8.2:52672296-52672315 None:intergenic 15.0%
!! AATTTATATTTGTGGTATAA+GGG - chr8.2:52671245-52671264 None:intergenic 15.0%
!! ACAAGATATTATGTAATTAT+AGG + chr8.2:52671174-52671193 MS.gene035406:intron 15.0%
!! CAAGATATTATGTAATTATA+GGG + chr8.2:52671175-52671194 MS.gene035406:intron 15.0%
!! TAAAACAAATAATGCATAAA+AGG - chr8.2:52671210-52671229 None:intergenic 15.0%
!!! ATATGTAGATTTTAAAATCA+AGG - chr8.2:52669791-52669810 None:intergenic 15.0%
!!! CTAAATTTTAATTATTCAAC+AGG + chr8.2:52670669-52670688 MS.gene035406:intron 15.0%
!!! GCAAAATAATATATTTTCAT+TGG - chr8.2:52670572-52670591 None:intergenic 15.0%
!!! TAAGTATTTCTTTCATTTTA+AGG - chr8.2:52669160-52669179 None:intergenic 15.0%
!!! TAATAAATCTAGAATACATA+AGG - chr8.2:52672375-52672394 None:intergenic 15.0%
!!! TTTATGCATTATTTGTTTTA+TGG + chr8.2:52671210-52671229 MS.gene035406:intron 15.0%
!! AAACATTATAAACACTACAT+AGG + chr8.2:52672138-52672157 MS.gene035406:intron 20.0%
!! ATTTGAATTGCATAAAATCA+TGG + chr8.2:52669818-52669837 MS.gene035406:intron 20.0%
!! CAATTTATATTTGTGGTATA+AGG - chr8.2:52671246-52671265 None:intergenic 20.0%
!! GTTAAAAGTAAGAGTTTAAT+AGG - chr8.2:52670648-52670667 None:intergenic 20.0%
!! TATACCACAAATATAAATTG+TGG + chr8.2:52671246-52671265 MS.gene035406:intron 20.0%
!! TATTGCAAAATTATGCAAAA+TGG - chr8.2:52671292-52671311 None:intergenic 20.0%
!! TTAAATAAAACATACGATCA+GGG - chr8.2:52671522-52671541 None:intergenic 20.0%
!! TTAATTCAATCTTACAAAAC+CGG + chr8.2:52672094-52672113 MS.gene035406:intron 20.0%
!! TTTAAATAAAACATACGATC+AGG - chr8.2:52671523-52671542 None:intergenic 20.0%
!!! AAATTCTACAACTTTTTGAA+TGG - chr8.2:52669947-52669966 None:intergenic 20.0%
!!! AATGATTTTGCAATAATCTA+CGG - chr8.2:52670006-52670025 None:intergenic 20.0%
!!! ATGTAGTGTTTATAATGTTT+TGG - chr8.2:52672138-52672157 None:intergenic 20.0%
!!! ATTTGACTTTTAAGCATTTT+GGG + chr8.2:52669002-52669021 MS.gene035406:CDS 20.0%
! AAAGATGAAAATGAACATCT+AGG - chr8.2:52670491-52670510 None:intergenic 25.0%
! AACATCGTTTAAATTTGTGA+AGG + chr8.2:52672677-52672696 MS.gene035406:intron 25.0%
! AAGTTATGAAAATGTTTCCA+AGG - chr8.2:52671006-52671025 None:intergenic 25.0%
! AATACATTTCTTAGAAATCG+AGG - chr8.2:52669295-52669314 None:intergenic 25.0%
! ACTTACTTAACCGTTTAAAA+AGG - chr8.2:52669395-52669414 None:intergenic 25.0%
! AGATGTATAAACTATGAGAA+GGG - chr8.2:52671597-52671616 None:intergenic 25.0%
! AGTATTCAGTGAGTAAAAAT+GGG - chr8.2:52672554-52672573 None:intergenic 25.0%
! ATGATAGCAATGATGAAATA+AGG - chr8.2:52672469-52672488 None:intergenic 25.0%
! ATTATGATATTCGAGTCAAT+GGG + chr8.2:52670740-52670759 MS.gene035406:CDS 25.0%
! CATGATTAATTAGTAGTGTT+CGG + chr8.2:52671061-52671080 MS.gene035406:intron 25.0%
! GGCTAAACAACTTAAAAAAA+AGG - chr8.2:52669374-52669393 None:intergenic 25.0%
! GGTTAATTAAGTTCAATTGA+TGG + chr8.2:52669839-52669858 MS.gene035406:intron 25.0%
! GTTAATCATGTTTAAATCTG+TGG - chr8.2:52669769-52669788 None:intergenic 25.0%
! TAGTATTCAGTGAGTAAAAA+TGG - chr8.2:52672555-52672574 None:intergenic 25.0%
! TGTAAATTAGATAAGAGTCT+TGG - chr8.2:52670199-52670218 None:intergenic 25.0%
! TGTGAAGGAAAATACATTAA+CGG + chr8.2:52672692-52672711 MS.gene035406:intron 25.0%
! TTATGTAATTATAGGGAAGT+AGG + chr8.2:52671182-52671201 MS.gene035406:intron 25.0%
! TTCAAACCAGAAATCTTAAA+AGG + chr8.2:52668773-52668792 MS.gene035406:CDS 25.0%
!! AACTTTTTGAATGGTTAACA+CGG - chr8.2:52669938-52669957 None:intergenic 25.0%
!! AGAAAAAATCAGTTTTACAC+TGG + chr8.2:52670543-52670562 MS.gene035406:intron 25.0%
!! ATGCTATTTGAACATCAATT+TGG - chr8.2:52669976-52669995 None:intergenic 25.0%
!! CATTTCTCGTATTCAATTTT+AGG - chr8.2:52670249-52670268 None:intergenic 25.0%
!! TATAAGTTTTTATCCAAGCA+GGG + chr8.2:52669696-52669715 MS.gene035406:intron 25.0%
!! TCATCACAAATACTCTATTT+TGG + chr8.2:52671925-52671944 MS.gene035406:intron 25.0%
!! TGATAAAAACAACTTTTGCA+AGG + chr8.2:52672418-52672437 MS.gene035406:intron 25.0%
!! TTATAAGTTTTTATCCAAGC+AGG + chr8.2:52669695-52669714 MS.gene035406:intron 25.0%
!! TTTGAAATATCAACGCAATT+GGG + chr8.2:52668836-52668855 MS.gene035406:CDS 25.0%
!!! AAAGTGAAAAGGTTATTTCT+AGG - chr8.2:52672031-52672050 None:intergenic 25.0%
!!! AGCTTTGGTTAATAGATTTT+GGG + chr8.2:52669439-52669458 MS.gene035406:intron 25.0%
!!! AGTTGTTTAGCCTTTTTAAA+CGG + chr8.2:52669382-52669401 MS.gene035406:intron 25.0%
!!! ATAAGTTTTGTAAGGTTGTT+TGG + chr8.2:52669499-52669518 MS.gene035406:intron 25.0%
!!! CTACTATCATAAGTTTTGTA+AGG + chr8.2:52669491-52669510 MS.gene035406:intron 25.0%
!!! CTGTAAATGTTGTATTTTTG+TGG + chr8.2:52670966-52670985 MS.gene035406:intron 25.0%
!!! GATTTGACTTTTAAGCATTT+TGG + chr8.2:52669001-52669020 MS.gene035406:CDS 25.0%
!!! GCTCTAACAAAATTTTAAGA+AGG - chr8.2:52672074-52672093 None:intergenic 25.0%
!!! TAAGTTTTGTAAGGTTGTTT+GGG + chr8.2:52669500-52669519 MS.gene035406:intron 25.0%
!!! TCATGATTTTTTTGACATGT+TGG + chr8.2:52671372-52671391 MS.gene035406:intron 25.0%
!!! TTATTTCTAGGTGATCTAAA+TGG - chr8.2:52672019-52672038 None:intergenic 25.0%
!!! TTTAAGATTTCTGGTTTGAA+GGG - chr8.2:52668773-52668792 None:intergenic 25.0%
!!! TTTTAAGATTTCTGGTTTGA+AGG - chr8.2:52668774-52668793 None:intergenic 25.0%
AAATGCCTCTGTATAAACTT+GGG + chr8.2:52670842-52670861 MS.gene035406:CDS 30.0%
ACAAAGACAGTAAAGTGAAA+AGG - chr8.2:52672042-52672061 None:intergenic 30.0%
ACATGACTTAGTTGAATGAA+GGG - chr8.2:52671714-52671733 None:intergenic 30.0%
ACTTAAGTATCTCAAGAAAG+GGG + chr8.2:52670347-52670366 MS.gene035406:CDS 30.0%
AGCTTACGAAAACAACTTAT+AGG + chr8.2:52669594-52669613 MS.gene035406:intron 30.0%
ATACATAAGGCTTCAAAGTT+TGG - chr8.2:52672362-52672381 None:intergenic 30.0%
ATCAGAATCCTTCTATAATG+TGG + chr8.2:52670140-52670159 MS.gene035406:intron 30.0%
ATTAATTAGTAGTGTTCGGT+TGG + chr8.2:52671065-52671084 MS.gene035406:intron 30.0%
ATTTCTTAGAAATCGAGGTT+GGG - chr8.2:52669290-52669309 None:intergenic 30.0%
CACTTAAGTATCTCAAGAAA+GGG + chr8.2:52670346-52670365 MS.gene035406:CDS 30.0%
GACACCACAATTTATATTTG+TGG - chr8.2:52671253-52671272 None:intergenic 30.0%
GAGATGTATAAACTATGAGA+AGG - chr8.2:52671598-52671617 None:intergenic 30.0%
GATTATGATATTCGAGTCAA+TGG + chr8.2:52670739-52670758 MS.gene035406:CDS 30.0%
TAAATGGTCATATACATGAG+AGG - chr8.2:52672003-52672022 None:intergenic 30.0%
TATATTTGTGGTATAAGGGT+AGG - chr8.2:52671241-52671260 None:intergenic 30.0%
TATTAAAGAGTGGAAGACAA+AGG - chr8.2:52671838-52671857 None:intergenic 30.0%
TGATTCTACTACAAGAAACT+TGG + chr8.2:52670699-52670718 MS.gene035406:CDS 30.0%
TGCAATACGTATTTAAACCT+TGG + chr8.2:52671305-52671324 MS.gene035406:intron 30.0%
TTAATTAGTAGTGTTCGGTT+GGG + chr8.2:52671066-52671085 MS.gene035406:intron 30.0%
TTCATTATTGTTTGCAGTGT+TGG + chr8.2:52670284-52670303 MS.gene035406:intron 30.0%
TTGAAATATCAACGCAATTG+GGG + chr8.2:52668837-52668856 MS.gene035406:CDS 30.0%
TTGAATAAGTGTCTATACGT+GGG + chr8.2:52669220-52669239 MS.gene035406:intron 30.0%
TTGCAATTTCGATGCATTTA+GGG + chr8.2:52669314-52669333 MS.gene035406:intron 30.0%
TTTGAATAAGTGTCTATACG+TGG + chr8.2:52669219-52669238 MS.gene035406:intron 30.0%
TTTGCAATTTCGATGCATTT+AGG + chr8.2:52669313-52669332 MS.gene035406:intron 30.0%
! GTAGTGAAACTAGAAAGTAT+AGG + chr8.2:52671148-52671167 MS.gene035406:intron 30.0%
! GTTTGAAATATCAACGCAAT+TGG + chr8.2:52668835-52668854 MS.gene035406:CDS 30.0%
! TAAAAACAACTTTTGCAAGG+TGG + chr8.2:52672421-52672440 MS.gene035406:intron 30.0%
! TTGGGAAGATATAAAAGTGT+TGG - chr8.2:52672278-52672297 None:intergenic 30.0%
!! AAAGTAGCTTTAATAACTGG+CGG + chr8.2:52668797-52668816 MS.gene035406:CDS 30.0%
!! AATGAAGGGTATTGCAATAT+GGG - chr8.2:52671700-52671719 None:intergenic 30.0%
!! CAGCTTTGGTTAATAGATTT+TGG + chr8.2:52669438-52669457 MS.gene035406:intron 30.0%
!! GTTATGTTTGTTTCTGTTCA+AGG + chr8.2:52671485-52671504 MS.gene035406:intron 30.0%
!! GTTGTTTTCGTAAGCTATAT+AGG - chr8.2:52669590-52669609 None:intergenic 30.0%
!!! ACTTTGCCTTTTAAGATTTC+TGG - chr8.2:52668782-52668801 None:intergenic 30.0%
AATGCCTCTGTATAAACTTG+GGG + chr8.2:52670843-52670862 MS.gene035406:CDS 35.0%
AATTCATGTATCTGCAGCAA+AGG + chr8.2:52670449-52670468 MS.gene035406:CDS 35.0%
ACAAAGGCTCTATAAGAGAA+AGG - chr8.2:52671822-52671841 None:intergenic 35.0%
ACTAACGAAAAACAGCTTTG+AGG - chr8.2:52669128-52669147 None:intergenic 35.0%
AGATCCAGAAATGAACCAAT+TGG + chr8.2:52672809-52672828 MS.gene035406:CDS 35.0%
AGCATTTGAAAGTCTATAGC+AGG - chr8.2:52671635-52671654 None:intergenic 35.0%
AGGATACTAAAGACACTATG+TGG - chr8.2:52669354-52669373 None:intergenic 35.0%
ATGAGTCGAGACAATTAAAG+AGG - chr8.2:52671901-52671920 None:intergenic 35.0%
ATTAGTGCTACCTTGCATTA+TGG + chr8.2:52670411-52670430 MS.gene035406:CDS 35.0%
CAATAGCATAGTTCAATGAG+TGG - chr8.2:52669899-52669918 None:intergenic 35.0%
CATAGTTTATACATCTCACC+TGG + chr8.2:52671601-52671620 MS.gene035406:intron 35.0%
CATTTCTTAGAAATCGAGGT+TGG - chr8.2:52669291-52669310 None:intergenic 35.0%
CTGAATACTAACCATGTAGT+TGG + chr8.2:52672565-52672584 MS.gene035406:intron 35.0%
GAAATGCCTCTGTATAAACT+TGG + chr8.2:52670841-52670860 MS.gene035406:CDS 35.0%
GACATGACTTAGTTGAATGA+AGG - chr8.2:52671715-52671734 None:intergenic 35.0%
GCACTTAAGTATCTCAAGAA+AGG + chr8.2:52670345-52670364 MS.gene035406:CDS 35.0%
GGATACTAAAGACACTATGT+GGG - chr8.2:52669353-52669372 None:intergenic 35.0%
GTATAAACTTGGGGAGAAAT+GGG + chr8.2:52670852-52670871 MS.gene035406:CDS 35.0%
GTTGTTAAAGAGTCTCACAT+CGG + chr8.2:52669185-52669204 MS.gene035406:intron 35.0%
TCCATTTCAAACCAACTACA+TGG - chr8.2:52672579-52672598 None:intergenic 35.0%
TGAATAAGTGTCTATACGTG+GGG + chr8.2:52669221-52669240 MS.gene035406:intron 35.0%
TGCAATTTCGATGCATTTAG+GGG + chr8.2:52669315-52669334 MS.gene035406:intron 35.0%
TGTATAAACTTGGGGAGAAA+TGG + chr8.2:52670851-52670870 MS.gene035406:CDS 35.0%
TTAACCGTCATCGAGTAATA+TGG - chr8.2:52671868-52671887 None:intergenic 35.0%
! AACACCAATTGGTTCATTTC+TGG - chr8.2:52672816-52672835 None:intergenic 35.0%
! ACAAAGGCTCTTTAAGAGAA+AGG - chr8.2:52671791-52671810 None:intergenic 35.0%
! ACTACTCATCTGAAACACAA+TGG - chr8.2:52670172-52670191 None:intergenic 35.0%
! AGAGAAAGGTTTTCATGAGA+TGG - chr8.2:52671777-52671796 None:intergenic 35.0%
! AGTTCTTCAATCTGCTGTTT+CGG + chr8.2:52668901-52668920 MS.gene035406:CDS 35.0%
! CTAGGGGTATACTATATTGA+AGG + chr8.2:52672244-52672263 MS.gene035406:intron 35.0%
! GAACTGGTGAGTAGTTATTT+TGG + chr8.2:52669101-52669120 MS.gene035406:intron 35.0%
! GGTTTTTGAATTCCATGCTT+GGG + chr8.2:52671096-52671115 MS.gene035406:intron 35.0%
! TGACTTTTAAGCATTTTGGG+AGG + chr8.2:52669005-52669024 MS.gene035406:CDS 35.0%
! TGGTTTTTGAATTCCATGCT+TGG + chr8.2:52671095-52671114 MS.gene035406:intron 35.0%
! TTGGTTAATAGATTTTGGGC+TGG + chr8.2:52669443-52669462 MS.gene035406:intron 35.0%
!! ACCATGTAGTTGGTTTGAAA+TGG + chr8.2:52672575-52672594 MS.gene035406:intron 35.0%
!! CTACTTCTCATTGACTTTGA+AGG - chr8.2:52671029-52671048 None:intergenic 35.0%
!! GAATGAAGGGTATTGCAATA+TGG - chr8.2:52671701-52671720 None:intergenic 35.0%
!! GGCAAAGTAGCTTTAATAAC+TGG + chr8.2:52668794-52668813 MS.gene035406:CDS 35.0%
!!! TAATAGATTTTGGGCTGGTT+TGG + chr8.2:52669448-52669467 MS.gene035406:intron 35.0%
!!! TTGCTTTTTGGAACACCAAT+TGG - chr8.2:52672827-52672846 None:intergenic 35.0%
AGGCTTCAAAGTTTGGTATC+AGG - chr8.2:52672355-52672374 None:intergenic 40.0%
AGTATCGCATACACCAAGTA+GGG - chr8.2:52670948-52670967 None:intergenic 40.0%
ATGCTATTGCTAACCACATG+CGG + chr8.2:52669910-52669929 MS.gene035406:intron 40.0%
ATGGATGTCTTTGTAACCCT+AGG + chr8.2:52672594-52672613 MS.gene035406:intron 40.0%
ATTCTTGTTAATGCTGCTGC+TGG + chr8.2:52669034-52669053 MS.gene035406:CDS 40.0%
CAGGGTCATATTAGGTGTAA+TGG + chr8.2:52669714-52669733 MS.gene035406:intron 40.0%
GAATAAGTGTCTATACGTGG+GGG + chr8.2:52669222-52669241 MS.gene035406:intron 40.0%
GGAGAAATGGGATATTGCAA+TGG + chr8.2:52670864-52670883 MS.gene035406:CDS 40.0%
GGAGACACTATGATAGTTGA+TGG + chr8.2:52672713-52672732 MS.gene035406:CDS 40.0%
GGTCATTGCCACATTATAGA+AGG - chr8.2:52670151-52670170 None:intergenic 40.0%
GTAGAACTGAAAAGAAGCCA+AGG - chr8.2:52671325-52671344 None:intergenic 40.0%
TACTACAAGAAACTTGGCAC+TGG + chr8.2:52670705-52670724 MS.gene035406:CDS 40.0%
TATCCAAGCAGGGTCATATT+AGG + chr8.2:52669706-52669725 MS.gene035406:intron 40.0%
TCAGGACATATAGACTGCAA+CGG - chr8.2:52672337-52672356 None:intergenic 40.0%
TGACTCACGTGTAAATGAAG+TGG + chr8.2:52669415-52669434 MS.gene035406:intron 40.0%
TGTAAATGAAGTGGCAGCTT+TGG + chr8.2:52669424-52669443 MS.gene035406:intron 40.0%
TTATCCAAGTGTTCCCTACT+TGG + chr8.2:52670932-52670951 MS.gene035406:intron 40.0%
TTCAATCTTACAAAACCGGC+TGG + chr8.2:52672098-52672117 MS.gene035406:intron 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - chr8.2:52672197-52672216 None:intergenic 40.0%
TTCTCCCCAAGTTTATACAG+AGG - chr8.2:52670850-52670869 None:intergenic 40.0%
TTCTTGTTAATGCTGCTGCT+GGG + chr8.2:52669035-52669054 MS.gene035406:CDS 40.0%
TTGTCTGTGACAAGTCTCAA+AGG - chr8.2:52670095-52670114 None:intergenic 40.0%
TTTGTGGTATAAGGGTAGGA+AGG - chr8.2:52671237-52671256 None:intergenic 40.0%
! AAACTGGCTCCTGAAGAAAT+AGG + chr8.2:52670802-52670821 MS.gene035406:CDS 40.0%
! AAGAAACTTGGCACTGGAAT+GGG + chr8.2:52670711-52670730 MS.gene035406:CDS 40.0%
! AGTCACTGTTTGAGATACCT+AGG - chr8.2:52672614-52672633 None:intergenic 40.0%
! GAGAAAGGTTTTCACGACAA+AGG - chr8.2:52671807-52671826 None:intergenic 40.0%
! GTCACTGTTTGAGATACCTA+GGG - chr8.2:52672613-52672632 None:intergenic 40.0%
!! AAAGAAGTGCTGATGACATG+TGG - chr8.2:52671741-52671760 None:intergenic 40.0%
!! GACACTATGATAGTTGATGG+AGG + chr8.2:52672716-52672735 MS.gene035406:CDS 40.0%
!! GTGTTGGATATCGATTCTGT+TGG + chr8.2:52670300-52670319 MS.gene035406:intron 40.0%
!! TAACGCAGAGAAGCATTGAA+AGG - chr8.2:52671347-52671366 None:intergenic 40.0%
!! TGATAGTTGATGGAGGACTT+TGG + chr8.2:52672723-52672742 MS.gene035406:CDS 40.0%
!! TTCTGGTTTGAAGGGTGATT+CGG - chr8.2:52668765-52668784 None:intergenic 40.0%
ACACCTAATATGACCCTGCT+TGG - chr8.2:52669712-52669731 None:intergenic 45.0%
ACCAAAGCAAAACCCAAGCA+TGG - chr8.2:52671111-52671130 None:intergenic 45.0%
ACCGTCATCGAGTAATATGG+TGG - chr8.2:52671865-52671884 None:intergenic 45.0%
ACTACATAGGCCATGTCTCT+AGG + chr8.2:52672151-52672170 MS.gene035406:intron 45.0%
ATATAGACTGCAACGGGAGT+AGG - chr8.2:52672330-52672349 None:intergenic 45.0%
ATTCCTGCTGTTGGGTTTGA+AGG + chr8.2:52668941-52668960 MS.gene035406:CDS 45.0%
CAGGACATATAGACTGCAAC+GGG - chr8.2:52672336-52672355 None:intergenic 45.0%
CAGTATCGCATACACCAAGT+AGG - chr8.2:52670949-52670968 None:intergenic 45.0%
CCAAGAAGCTCCATAATGCA+AGG - chr8.2:52670424-52670443 None:intergenic 45.0%
CCTGAAGAAATAGGTAGCAG+AGG + chr8.2:52670811-52670830 MS.gene035406:CDS 45.0%
CCTTGCATTATGGAGCTTCT+TGG + chr8.2:52670421-52670440 MS.gene035406:CDS 45.0%
CTAACGAGAGTAGAGTGATG+TGG - chr8.2:52670594-52670613 None:intergenic 45.0%
CTAATACAACCCCACGAAAC+CGG - chr8.2:52669266-52669285 None:intergenic 45.0%
CTATAGCAGGATTACAGACC+AGG - chr8.2:52671622-52671641 None:intergenic 45.0%
CTCTTCTTAGCATCAGATGC+AGG + chr8.2:52670892-52670911 MS.gene035406:CDS 45.0%
CTTCACACCCAACACAATGA+AGG + chr8.2:52672196-52672215 MS.gene035406:intron 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr8.2:52672198-52672217 None:intergenic 45.0%
GCCACCATATTACTCGATGA+CGG + chr8.2:52671861-52671880 MS.gene035406:intron 45.0%
TACACCAAGTAGGGAACACT+TGG - chr8.2:52670939-52670958 None:intergenic 45.0%
TCAACGCAATTGGGGAAACA+TGG + chr8.2:52668845-52668864 MS.gene035406:CDS 45.0%
TCACCAGTTCGAAACCCATT+CGG - chr8.2:52669091-52669110 None:intergenic 45.0%
TCATTGTGTTGGGTGTGAAG+GGG - chr8.2:52672196-52672215 None:intergenic 45.0%
TCTTACAAAACCGGCTGGTA+AGG + chr8.2:52672103-52672122 MS.gene035406:intron 45.0%
TGCTATTGCTAACCACATGC+GGG + chr8.2:52669911-52669930 MS.gene035406:intron 45.0%
TGGGTTGCCTTCATTGTGTT+GGG - chr8.2:52672206-52672225 None:intergenic 45.0%
TGGTGACTATCTGAAAGCCT+TGG + chr8.2:52670986-52671005 MS.gene035406:intron 45.0%
TGGTGGCAGCTATTAAAGAG+TGG - chr8.2:52671848-52671867 None:intergenic 45.0%
TTCCTGCTGTTGGGTTTGAA+GGG + chr8.2:52668942-52668961 MS.gene035406:CDS 45.0%
TTGCTGCAATTAGGTGGCTA+GGG + chr8.2:52672227-52672246 MS.gene035406:intron 45.0%
TTTAATAACTGGCGGAGCGT+CGG + chr8.2:52668805-52668824 MS.gene035406:CDS 45.0%
! AGAAACTTGGCACTGGAATG+GGG + chr8.2:52670712-52670731 MS.gene035406:CDS 45.0%
! CAAGAAACTTGGCACTGGAA+TGG + chr8.2:52670710-52670729 MS.gene035406:CDS 45.0%
! CCTCTGCTACCTATTTCTTC+AGG - chr8.2:52670814-52670833 None:intergenic 45.0%
! GAATTTTCTTGCTGCTGCTG+AGG + chr8.2:52669057-52669076 MS.gene035406:CDS 45.0%
! TCCATGCTTGGGTTTTGCTT+TGG + chr8.2:52671107-52671126 MS.gene035406:intron 45.0%
!! ATGCCAGGAGTGTCACTTAT+TGG - chr8.2:52670778-52670797 None:intergenic 45.0%
!! TTGGTGACAGTCTAGCTTTC+TGG + chr8.2:52671126-52671145 MS.gene035406:intron 45.0%
!!! GATTTTGGGCTGGTTTGGAT+TGG + chr8.2:52669453-52669472 MS.gene035406:intron 45.0%
!! ACAAATAAATAAAAAATTAA+AGG - chr8.2:52672645-52672664 None:intergenic 5.0%
!! GAAAAAAAAAAAAAAAAAAA+AGG - chr8.2:52672308-52672327 None:intergenic 5.0%
AAAACCGGCTGGTAAGGTGA+AGG + chr8.2:52672109-52672128 MS.gene035406:intron 50.0%
AGCCACCTAATTGCAGCAAG+TGG - chr8.2:52672226-52672245 None:intergenic 50.0%
ATTGGGGAAACATGGAGCGT+CGG + chr8.2:52668853-52668872 MS.gene035406:CDS 50.0%
CACTCCTGGCATGAGTAAAC+TGG + chr8.2:52670786-52670805 MS.gene035406:CDS 50.0%
CCTGGTAGGAACTCTTCTAG+CGG + chr8.2:52670372-52670391 MS.gene035406:CDS 50.0%
CCTTTGGCAAATAACGTGGC+CGG - chr8.2:52672754-52672773 None:intergenic 50.0%
CGCTTTCGATTCCTGCTGTT+GGG + chr8.2:52668933-52668952 MS.gene035406:CDS 50.0%
CTGAGGATCTTTCGCCGAAT+GGG + chr8.2:52669074-52669093 MS.gene035406:CDS 50.0%
CTGGTAGGAACTCTTCTAGC+GGG + chr8.2:52670373-52670392 MS.gene035406:CDS 50.0%
CTTGCTGCAATTAGGTGGCT+AGG + chr8.2:52672226-52672245 MS.gene035406:intron 50.0%
GCCACCTAATTGCAGCAAGT+GGG - chr8.2:52672225-52672244 None:intergenic 50.0%
GCCACGTTATTTGCCAAAGG+AGG + chr8.2:52672754-52672773 MS.gene035406:CDS 50.0%
GCCTCCTTTGGCAAATAACG+TGG - chr8.2:52672758-52672777 None:intergenic 50.0%
GGTCCAATAAGTGACACTCC+TGG + chr8.2:52670772-52670791 MS.gene035406:CDS 50.0%
GTAACCTTCACCTTACCAGC+CGG - chr8.2:52672116-52672135 None:intergenic 50.0%
TCCTGCTGTTGGGTTTGAAG+GGG + chr8.2:52668943-52668962 MS.gene035406:CDS 50.0%
TCGCTTTCGATTCCTGCTGT+TGG + chr8.2:52668932-52668951 MS.gene035406:CDS 50.0%
TCTCATGCTGCCTAGAGACA+TGG - chr8.2:52672164-52672183 None:intergenic 50.0%
TGCTGCAATTAGGTGGCTAG+GGG + chr8.2:52672228-52672247 MS.gene035406:intron 50.0%
TGGTAGGAACTCTTCTAGCG+GGG + chr8.2:52670374-52670393 MS.gene035406:CDS 50.0%
TGTGAGGAAGCAGGAAGATG+CGG + chr8.2:52668967-52668986 MS.gene035406:CDS 50.0%
TTGGGTTTGAAGGGGATGTG+AGG + chr8.2:52668951-52668970 MS.gene035406:CDS 50.0%
! ACCCACTTGCTGCAATTAGG+TGG + chr8.2:52672221-52672240 MS.gene035406:intron 50.0%
! GCAACCCACTTGCTGCAATT+AGG + chr8.2:52672218-52672237 MS.gene035406:intron 50.0%
! GTGGGTTGCCTTCATTGTGT+TGG - chr8.2:52672207-52672226 None:intergenic 50.0%
! TTAATAACTGGCGGAGCGTC+GGG + chr8.2:52668806-52668825 MS.gene035406:CDS 50.0%
!! GGAGTGTCACTTATTGGACC+TGG - chr8.2:52670772-52670791 None:intergenic 50.0%
!! TATCTCAAGAAAGGGGCACC+TGG + chr8.2:52670354-52670373 MS.gene035406:CDS 50.0%
ACCTGTCTCACTGCCTCCTT+TGG - chr8.2:52672770-52672789 None:intergenic 55.0%
AGTGTTCGGTTGGGACTTGC+TGG + chr8.2:52671075-52671094 MS.gene035406:intron 55.0%
CCGCTAGAAGAGTTCCTACC+AGG - chr8.2:52670375-52670394 None:intergenic 55.0%
CCGGCCACGTTATTTGCCAA+AGG + chr8.2:52672751-52672770 MS.gene035406:CDS 55.0%
CGAGTCAATGGGATTGCACC+AGG + chr8.2:52670751-52670770 MS.gene035406:CDS 55.0%
GCAATCCTCACCTCACATGC+CGG + chr8.2:52669244-52669263 MS.gene035406:intron 55.0%
GCTGAGGATCTTTCGCCGAA+TGG + chr8.2:52669073-52669092 MS.gene035406:CDS 55.0%
GGAGCCAGTTTACTCATGCC+AGG - chr8.2:52670793-52670812 None:intergenic 55.0%
GGTAGGAACTCTTCTAGCGG+GGG + chr8.2:52670375-52670394 MS.gene035406:CDS 55.0%
TCCCCTTCAAACCCAACAGC+AGG - chr8.2:52668947-52668966 None:intergenic 55.0%
TGAAGGGGATGTGAGGAAGC+AGG + chr8.2:52668958-52668977 MS.gene035406:CDS 55.0%
TTGTGTTGGGTGTGAAGGGG+TGG - chr8.2:52672193-52672212 None:intergenic 55.0%
! TCGCCGAATGGGTTTCGAAC+TGG + chr8.2:52669085-52669104 MS.gene035406:intron 55.0%
!! ACCTCACATGCCGGTTTCGT+GGG + chr8.2:52669253-52669272 MS.gene035406:intron 55.0%
!! TCAAGAAAGGGGCACCTGGT+AGG + chr8.2:52670358-52670377 MS.gene035406:CDS 55.0%
CGAAACCGGCATGTGAGGTG+AGG - chr8.2:52669252-52669271 None:intergenic 60.0%
GCCAAAGGAGGCAGTGAGAC+AGG + chr8.2:52672766-52672785 MS.gene035406:CDS 60.0%
GGTTAACACGGTCCCGCATG+TGG - chr8.2:52669926-52669945 None:intergenic 60.0%
!! CACCTCACATGCCGGTTTCG+TGG + chr8.2:52669252-52669271 MS.gene035406:intron 60.0%
!! CCTCACATGCCGGTTTCGTG+GGG + chr8.2:52669254-52669273 MS.gene035406:intron 60.0%
!! CGGTAGCTGTGATGGGTCGT+CGG + chr8.2:52668873-52668892 MS.gene035406:CDS 60.0%
!! GGAGCGTCGGTAGCTGTGAT+GGG + chr8.2:52668866-52668885 MS.gene035406:CDS 60.0%
!! TGGAGCGTCGGTAGCTGTGA+TGG + chr8.2:52668865-52668884 MS.gene035406:CDS 60.0%
CCCCACGAAACCGGCATGTG+AGG - chr8.2:52669257-52669276 None:intergenic 65.0%
!! ACTGGCGGAGCGTCGGGAAT+TGG + chr8.2:52668812-52668831 MS.gene035406:CDS 65.0%
!! CTGGCGGAGCGTCGGGAATT+GGG + chr8.2:52668813-52668832 MS.gene035406:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 52668749 52672853 52668749 ID=MS.gene035406
chr8.2 mRNA 52668749 52672853 52668749 ID=MS.gene035406.t1;Parent=MS.gene035406
chr8.2 exon 52668749 52669095 52668749 ID=MS.gene035406.t1.exon1;Parent=MS.gene035406.t1
chr8.2 CDS 52668749 52669095 52668749 ID=cds.MS.gene035406.t1;Parent=MS.gene035406.t1
chr8.2 exon 52669728 52669741 52669728 ID=MS.gene035406.t1.exon2;Parent=MS.gene035406.t1
chr8.2 CDS 52669728 52669741 52669728 ID=cds.MS.gene035406.t1;Parent=MS.gene035406.t1
chr8.2 exon 52670301 52670470 52670301 ID=MS.gene035406.t1.exon3;Parent=MS.gene035406.t1
chr8.2 CDS 52670301 52670470 52670301 ID=cds.MS.gene035406.t1;Parent=MS.gene035406.t1
chr8.2 exon 52670691 52670913 52670691 ID=MS.gene035406.t1.exon4;Parent=MS.gene035406.t1
chr8.2 CDS 52670691 52670913 52670691 ID=cds.MS.gene035406.t1;Parent=MS.gene035406.t1
chr8.2 exon 52672699 52672853 52672699 ID=MS.gene035406.t1.exon5;Parent=MS.gene035406.t1
chr8.2 CDS 52672699 52672853 52672699 ID=cds.MS.gene035406.t1;Parent=MS.gene035406.t1
Gene Sequence

>MS.gene035406

ATGGTAGCTTCAACCGAATCACCCTTCAAACCAGAAATCTTAAAAGGCAAAGTAGCTTTAATAACTGGCGGAGCGTCGGGAATTGGGTTTGAAATATCAACGCAATTGGGGAAACATGGAGCGTCGGTAGCTGTGATGGGTCGTCGGAAGCAAGTTCTTCAATCTGCTGTTTCGGTTCTTCAATCGCTTTCGATTCCTGCTGTTGGGTTTGAAGGGGATGTGAGGAAGCAGGAAGATGCGGCGAGAGTTGTTGATTTGACTTTTAAGCATTTTGGGAGGATTGATATTCTTGTTAATGCTGCTGCTGGGAATTTTCTTGCTGCTGCTGAGGATCTTTCGCCGAATGGGTTTCGAACTGGTGAGTAGTTATTTTGGTCCTCAAAGCTGTTTTTCGTTAGTCAATTTAGTCCTTAAAATGAAAGAAATACTTATGAATGTTGTTAAAGAGTCTCACATCGGTTGAGAGATGATTTGAATAAGTGTCTATACGTGGGGGCAATCCTCACCTCACATGCCGGTTTCGTGGGGTTGTATTAGACCCAACCTCGATTTCTAAGAAATGTATTTGCAATTTCGATGCATTTAGGGGATGACAGAGCGTCCCACATAGTGTCTTTAGTATCCTTTTTTTTAAGTTGTTTAGCCTTTTTAAACGGTTAAGTAAGTTGACTCACGTGTAAATGAAGTGGCAGCTTTGGTTAATAGATTTTGGGCTGGTTTGGATTGGCTTATTTGAGCTTATCTACTATCATAAGTTTTGTAAGGTTGTTTGGGAGAAATTAAGAAACTAACACATGATATGTTCATAAGCTGTTTTCAACTTATTTTCGTTAGTTCTCCTATATAGCTTACGAAAACAACTTATAGGTTATATGAAAACAATTTAAGTTTATTTTATCATGTGCTATAGAAATAGCTTATGCATAAGTGCGTATCATAATAAGTGTTATAAGTTTTTATCCAAGCAGGGTCATATTAGGTGTAATGGCTTATGTACAATCTACTGAACTTTATCAACCACAGATTTAAACATGATTAACCTTGATTTTAAAATCTACATATCATTTGAATTTGAATTGCATAAAATCATGGTTAATTAAGTTCAATTGATGGATATTGTGTTATCAGATATTGATATATCTACTAACCACTCATTGAACTATGCTATTGCTAACCACATGCGGGACCGTGTTAACCATTCAAAAAGTTGTAGAATTTTCTTATCCAAATTGATGTTCAAATAGCATTTCTGTTCCGTAGATTATTGCAAAATCATTTATAGAATTTTCACTAACTCGTTCTACACGAGTTCATTTAAAATTTAAAATATGTGTATGATCATTCCTTTGAGACTTGTCACAGACAAAATTTTCATAACATTGCTCATAGAAATCAGAATCCTTCTATAATGTGGCAATGACCATTGTGTTTCAGATGAGTAGTTATTCCAAGACTCTTATCTAATTTACAATTTCTCTTAACAAGATGCAACTTTATCCTAAAATTGAATACGAGAAATGAATTGATGATCAATTTTCATTATTGTTTGCAGTGTTGGATATCGATTCTGTTGGCACATTCACTATGTGTCATGAAGCACTTAAGTATCTCAAGAAAGGGGCACCTGGTAGGAACTCTTCTAGCGGGGGATTAATAATAAACATTAGTGCTACCTTGCATTATGGAGCTTCTTGGTATCAAATTCATGTATCTGCAGCAAAGGTTTGTAACACAGTATACCTAGATGTTCATTTTCATCTTTTTAATTTAAGGATTTAAAGGTTATGCACTATCAGAAAAAATCAGTTTTACACTGGCATCCAATGAAAATATATTATTTTGCCACATCACTCTACTCTCGTTAGATGCGAGTTTAAATTTGATTTATAGTGCATGCCTATTAAACTCTTACTTTTAACTCTAAATTTTAATTATTCAACAGGCAGCTGTTGATTCTACTACAAGAAACTTGGCACTGGAATGGGGAACAGATTATGATATTCGAGTCAATGGGATTGCACCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTGGCTCCTGAAGAAATAGGTAGCAGAGGCAGAGATGAAATGCCTCTGTATAAACTTGGGGAGAAATGGGATATTGCAATGGCTGCTCTCTTCTTAGCATCAGATGCAGGTTAGTAACTTTGTGCAGTTATCCAAGTGTTCCCTACTTGGTGTATGCGATACTGTAAATGTTGTATTTTTGTGGTGACTATCTGAAAGCCTTGGAAACATTTTCATAACTTCCTTCAAAGTCAATGAGAAGTAGTTAGATTTCTTGCATGATTAATTAGTAGTGTTCGGTTGGGACTTGCTGGTTTTTGAATTCCATGCTTGGGTTTTGCTTTGGTGACAGTCTAGCTTTCTGGTAGTGAAACTAGAAAGTATAGGTTCACAAGATATTATGTAATTATAGGGAAGTAGGCTCCTTTTATGCATTATTTGTTTTATGGTCCTTCCTACCCTTATACCACAAATATAAATTGTGGTGTCTTTAGACAAAATGTATCCATTTTGCATAATTTTGCAATACGTATTTAAACCTTGGCTTCTTTTCAGTTCTACCTTTCAATGCTTCTCTGCGTTAATTTTTCATGATTTTTTTGACATGTTGGTTTTAAATTGTTACAAAACATCAATATTTGATTTTAGAAACATTTTATATATATTATTTTTCGTGTAAAAAACACTTGTGTCTCTCTAATGTTATGTTTGTTTCTGTTCAAGGAATACTCGTGACCCTGATCGTATGTTTTATTTAAATTATAACTCTTCTATCTTTTTCAGTGTCGTCTTATTTTGTCTGATACTTTTCCCTTCTCATAGTTTATACATCTCACCTGGTCTGTAATCCTGCTATAGACTTTCAAATGCTTTTGCTTTATCATTACTTAATAATTTATCAATGTCTTTTTTACCCATATTGCAATACCCTTCATTCAACTAAGTCATGTCACTCCACATGTCATCAGCACTTCTTTAGATCTCTCAAAACCATCTCATGAAAACCTTTCTCTTAAAGAGCCTTTGTCGTGAAAACCTTTCTCTTATAGAGCCTTTGTCTTCCACTCTTTAATAGCTGCCACCATATTACTCGATGACGGTTAACTTGAGTATTCCTCTTTAATTGTCTCGACTCATGCATTCATCACAAATACTCTATTTTGGATTGTTAGACTCTCTTCTTGTTACACTTCATGCAATGTTTTTTATTCAATTTCCTCTCATGTATATGACCATTTAGATCACCTAGAAATAACCTTTTCACTTTACTGTCTTTGTTCGACAAAACCTTCTTAAAATTTTGTTAGAGCTTAATTCAATCTTACAAAACCGGCTGGTAAGGTGAAGGTTACCAAAACATTATAAACACTACATAGGCCATGTCTCTAGGCAGCATGAGACTAAATCCACCCCTTCACACCCAACACAATGAAGGCAACCCACTTGCTGCAATTAGGTGGCTAGGGGTATACTATATTGAAGGTTGAATTTCCAACACTTTTATATCTTCCCAAATCTTTACCTTTTTTTTTTTTTTTTTTTTCCTACTCCCGTTGCAGTCTATATGTCCTGATACCAAACTTTGAAGCCTTATGTATTCTAGATTTATTAGTCTTTTGTAAACTTTCACATGTTGATAAAAACAACTTTTGCAAGGTGGTTCGTTAATGTTATTTTCATATCCTTATTTCATCATTGCTATCATATAATTATCATATTTGTTAGTCTTTGTTTTGAAATGTAGATTGTTAGTCTTTGTTTCTCTATCCCATTTTTACTCACTGAATACTAACCATGTAGTTGGTTTGAAATGGATGTCTTTGTAACCCTAGGTATCTCAAACAGTGACTATTTTATTCCTTTAATTTTTTATTTATTTGTCTATGGAAACTTAACATCGTTTAAATTTGTGAAGGAAAATACATTAACGGAGACACTATGATAGTTGATGGAGGACTTTGGCTGAGCCGGCCACGTTATTTGCCAAAGGAGGCAGTGAGACAGGTATCACGAGAAGTAGAAAAAAGATCCAGAAATGAACCAATTGGTGTTCCAAAAAGCAAGCTATGA

Protein sequence

>MS.gene035406.t1

MVASTESPFKPEILKGKVALITGGASGIGFEISTQLGKHGASVAVMGRRKQVLQSAVSVLQSLSIPAVGFEGDVRKQEDAARVVDLTFKHFGRIDILVNAAAGNFLAAAEDLSPNGCNGLLLDIDSVGTFTMCHEALKYLKKGAPGRNSSSGGLIINISATLHYGASWYQIHVSAAKAAVDSTTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPEEIGSRGRDEMPLYKLGEKWDIAMAALFLASDAGKYINGDTMIVDGGLWLSRPRYLPKEAVRQVSREVEKRSRNEPIGVPKSKL