AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035412


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035412.t1 MTR_8g442750 96.689 302 9 1 1 302 1 301 0.0 592
MS.gene035412.t1 MTR_4g064887 31.274 259 158 7 14 266 15 259 3.98e-25 101
MS.gene035412.t1 MTR_7g113650 30.147 272 158 9 9 265 34 288 3.16e-23 97.1
MS.gene035412.t1 MTR_7g063270 29.845 258 166 6 14 266 16 263 3.67e-23 96.3
MS.gene035412.t1 MTR_4g132850 30.469 256 167 3 11 266 4 248 1.00e-22 95.1
MS.gene035412.t1 MTR_4g131740 31.203 266 161 9 14 269 40 293 3.43e-22 94.4
MS.gene035412.t1 MTR_1g082760 29.323 266 168 6 9 265 34 288 8.47e-22 93.2
MS.gene035412.t1 MTR_4g064883 29.528 254 169 5 14 266 14 258 3.37e-21 91.3
MS.gene035412.t1 MTR_7g063260 28.409 264 161 7 14 265 16 263 7.78e-21 90.1
MS.gene035412.t1 MTR_3g068070 29.008 262 160 9 14 266 15 259 7.94e-21 90.1
MS.gene035412.t1 MTR_3g068065 28.517 263 160 11 14 266 17 261 1.31e-20 89.7
MS.gene035412.t1 MTR_3g068155 29.771 262 158 10 14 266 19 263 3.93e-20 88.2
MS.gene035412.t1 MTR_7g071680 30.314 287 172 8 4 270 19 297 4.29e-20 88.6
MS.gene035412.t1 MTR_3g068175 29.771 262 158 10 14 266 17 261 9.22e-20 87.4
MS.gene035412.t1 MTR_4g052350 30.970 268 150 10 14 268 14 259 2.69e-19 85.9
MS.gene035412.t1 MTR_7g063330 28.137 263 164 8 14 266 15 262 3.64e-19 85.5
MS.gene035412.t1 MTR_7g063320 27.839 273 157 8 14 268 15 265 4.13e-19 85.5
MS.gene035412.t1 MTR_4g052320 30.292 274 145 9 14 268 8 254 4.19e-19 85.5
MS.gene035412.t1 MTR_1196s0010 30.588 255 157 8 17 268 277 514 6.35e-19 87.0
MS.gene035412.t1 MTR_3g068085 28.462 260 164 8 14 266 15 259 6.83e-19 84.7
MS.gene035412.t1 MTR_4g052300 29.078 282 155 9 14 277 8 262 9.29e-19 84.3
MS.gene035412.t1 MTR_3g085740 28.674 279 161 8 3 268 67 320 1.40e-18 84.7
MS.gene035412.t1 MTR_7g063390 27.957 279 173 9 1 266 1 264 1.83e-18 83.6
MS.gene035412.t1 MTR_3g068175 29.389 262 163 10 14 266 17 265 3.08e-18 83.2
MS.gene035412.t1 MTR_7g094510 30.000 260 162 9 14 265 6 253 3.25e-18 82.8
MS.gene035412.t1 MTR_3g020670 30.851 282 158 11 3 266 7 269 7.53e-18 82.0
MS.gene035412.t1 MTR_4g052340 29.588 267 159 8 14 270 14 261 1.62e-17 80.9
MS.gene035412.t1 MTR_7g063360 27.817 284 167 10 1 266 1 264 5.99e-17 79.3
MS.gene035412.t1 MTR_8g096620 31.390 223 138 5 9 228 40 250 7.88e-17 80.1
MS.gene035412.t1 MTR_8g096580 33.168 202 115 6 12 207 43 230 1.22e-16 79.3
MS.gene035412.t1 MTR_4g064887 32.500 200 115 7 14 207 15 200 2.85e-16 76.6
MS.gene035412.t1 MTR_4g058840 29.885 261 164 10 14 265 11 261 4.87e-16 77.0
MS.gene035412.t1 MTR_4g058820 29.885 261 164 10 14 265 11 261 4.87e-16 77.0
MS.gene035412.t1 MTR_1g068955 30.797 276 164 9 1 264 1 261 1.06e-15 76.3
MS.gene035412.t1 MTR_7g105460 28.881 277 157 11 14 273 13 266 1.19e-15 75.9
MS.gene035412.t1 MTR_7g105580 30.769 260 140 11 14 265 8 235 5.71e-15 73.6
MS.gene035412.t1 MTR_4g078630 29.268 287 161 11 1 266 5 270 2.67e-14 72.0
MS.gene035412.t1 MTR_2g090165 28.253 269 172 11 14 275 6 260 3.27e-14 71.6
MS.gene035412.t1 MTR_7g110160 27.675 271 161 10 14 279 6 246 3.80e-14 71.2
MS.gene035412.t1 MTR_4g064883 30.769 195 125 5 14 207 14 199 1.50e-13 68.9
MS.gene035412.t1 MTR_1g051165 28.674 279 172 12 6 268 5 272 1.83e-13 69.7
MS.gene035412.t1 MTR_7g110140 29.740 269 171 9 14 275 6 263 3.25e-13 68.6
MS.gene035412.t1 MTR_7g083870 29.151 271 155 12 14 266 35 286 6.96e-13 68.2
MS.gene035412.t1 MTR_7g105590 30.457 197 124 5 14 208 8 193 7.40e-13 66.6
MS.gene035412.t1 MTR_7g110130 26.641 259 173 9 14 266 6 253 5.46e-12 65.1
MS.gene035412.t1 MTR_7g063270 36.082 97 56 3 174 266 120 214 2.26e-11 62.8
MS.gene035412.t1 MTR_3g098470 29.054 148 97 2 15 162 33 172 6.34e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035412.t1 AT3G12800 76.510 298 68 2 6 302 2 298 4.52e-157 440
MS.gene035412.t1 AT2G07640 75.333 150 36 1 132 280 1 150 1.07e-69 213
MS.gene035412.t1 AT3G05260 31.022 274 168 8 5 269 27 288 1.53e-26 106
MS.gene035412.t1 AT1G54870 30.769 260 161 6 14 265 82 330 6.46e-26 105
MS.gene035412.t1 AT1G54870 30.769 260 161 6 14 265 84 332 7.15e-26 105
MS.gene035412.t1 AT1G63380 31.679 262 159 10 14 265 15 266 2.56e-24 99.8
MS.gene035412.t1 AT1G63380 31.679 262 159 10 14 265 19 270 2.83e-24 99.8
MS.gene035412.t1 AT1G63380 31.679 262 159 10 14 265 22 273 2.84e-24 100
MS.gene035412.t1 AT1G63380 31.679 262 159 10 14 265 17 268 3.15e-24 99.8
MS.gene035412.t1 AT2G17845 33.962 265 151 11 14 265 47 300 5.28e-24 99.8
MS.gene035412.t1 AT1G36580 68.254 63 20 0 229 291 1 63 1.03e-23 96.3
MS.gene035412.t1 AT4G05530 30.469 256 167 2 11 266 6 250 1.67e-23 97.1
MS.gene035412.t1 AT1G52340 31.522 276 161 10 14 273 18 281 1.40e-22 95.1
MS.gene035412.t1 AT1G62610 31.298 262 160 10 14 265 14 265 2.56e-22 94.4
MS.gene035412.t1 AT1G62610 31.298 262 160 10 14 265 15 266 2.74e-22 94.4
MS.gene035412.t1 AT1G62610 31.298 262 160 10 14 265 19 270 2.78e-22 94.4
MS.gene035412.t1 AT1G62610 31.298 262 160 10 14 265 13 264 2.93e-22 94.4
MS.gene035412.t1 AT2G29150 28.846 260 160 7 14 265 16 258 2.43e-21 91.7
MS.gene035412.t1 AT2G29290 30.451 266 169 9 14 275 7 260 4.54e-21 90.9
MS.gene035412.t1 AT5G50600 32.487 197 122 3 12 207 43 229 1.30e-20 90.9
MS.gene035412.t1 AT5G50700 32.487 197 122 3 12 207 43 229 1.30e-20 90.9
MS.gene035412.t1 AT2G29260 29.688 256 166 6 14 266 68 312 1.60e-20 90.1
MS.gene035412.t1 AT3G55310 32.584 267 149 12 14 265 17 267 2.73e-20 89.0
MS.gene035412.t1 AT3G55290 32.700 263 154 11 14 265 18 268 4.45e-20 88.2
MS.gene035412.t1 AT3G55290 32.700 263 154 11 14 265 17 267 4.80e-20 88.2
MS.gene035412.t1 AT5G18210 30.798 263 161 9 14 266 8 259 5.82e-20 87.8
MS.gene035412.t1 AT2G29370 27.734 256 171 6 14 266 16 260 1.01e-19 87.0
MS.gene035412.t1 AT2G29360 28.519 270 169 9 14 275 16 269 1.07e-19 87.0
MS.gene035412.t1 AT3G46170 33.333 267 147 11 14 265 26 276 1.23e-19 87.4
MS.gene035412.t1 AT1G07440 28.889 270 169 8 14 276 12 265 3.78e-19 85.5
MS.gene035412.t1 AT2G29310 28.676 272 168 10 14 276 7 261 4.47e-19 85.1
MS.gene035412.t1 AT5G06060 27.820 266 178 6 14 276 9 263 4.85e-19 85.1
MS.gene035412.t1 AT3G51680 30.877 285 169 10 5 270 23 298 7.30e-19 85.5
MS.gene035412.t1 AT2G29340 29.391 279 181 7 14 289 7 272 1.31e-18 84.7
MS.gene035412.t1 AT3G04000 29.474 285 171 9 1 268 1 272 3.81e-18 82.8
MS.gene035412.t1 AT2G29350 27.099 262 162 8 14 265 15 257 5.01e-18 82.4
MS.gene035412.t1 AT2G29320 27.715 267 176 6 14 275 13 267 6.75e-18 82.0
MS.gene035412.t1 AT2G29330 30.545 275 157 10 14 275 7 260 1.17e-17 81.3
MS.gene035412.t1 AT4G13180 29.057 265 160 10 14 266 13 261 2.37e-17 80.5
MS.gene035412.t1 AT2G29340 28.947 266 175 6 14 276 7 261 2.47e-17 80.5
MS.gene035412.t1 AT4G03140 29.670 273 168 6 14 275 78 337 4.38e-17 80.9
MS.gene035412.t1 AT3G26770 26.394 269 165 9 14 266 41 292 4.96e-17 80.1
MS.gene035412.t1 AT1G07450 27.407 270 171 8 14 275 8 260 1.27e-16 78.6
MS.gene035412.t1 AT2G30670 27.444 266 179 6 14 276 7 261 1.79e-16 78.2
MS.gene035412.t1 AT5G18210 31.154 260 156 10 14 261 8 256 2.60e-16 77.8
MS.gene035412.t1 AT3G47350 32.338 201 119 5 12 208 42 229 6.38e-16 77.0
MS.gene035412.t1 AT2G47140 28.679 265 169 10 14 271 6 257 7.35e-16 76.3
MS.gene035412.t1 AT3G47350 32.338 201 119 5 12 208 42 229 9.28e-16 76.6
MS.gene035412.t1 AT1G24360 28.148 270 172 7 1 268 70 319 1.84e-15 75.9
MS.gene035412.t1 AT2G29290 28.980 245 158 9 35 275 11 243 2.77e-15 74.3
MS.gene035412.t1 AT2G47130 28.519 270 162 11 14 271 6 256 3.76e-15 74.3
MS.gene035412.t1 AT3G47360 29.534 193 125 4 17 208 48 230 5.10e-15 74.7
MS.gene035412.t1 AT2G29300 26.792 265 163 9 14 266 7 252 6.32e-15 73.6
MS.gene035412.t1 AT2G29300 26.792 265 163 9 14 266 7 252 6.56e-15 73.9
MS.gene035412.t1 AT2G47120 28.102 274 157 11 14 271 7 256 7.45e-15 73.6
MS.gene035412.t1 AT2G47120 28.102 274 157 11 14 271 6 255 8.94e-15 73.2
MS.gene035412.t1 AT5G50770 34.343 198 113 5 12 205 43 227 1.05e-14 73.9
MS.gene035412.t1 AT3G26760 27.372 274 176 8 14 275 36 298 1.61e-14 73.2
MS.gene035412.t1 AT4G10020 28.283 198 125 4 7 199 40 225 2.56e-14 73.2
MS.gene035412.t1 AT3G29250 29.259 270 155 12 12 266 42 290 7.13e-14 71.2
MS.gene035412.t1 AT3G29250 29.044 272 157 12 14 270 6 256 1.73e-13 69.3
MS.gene035412.t1 AT3G29250 29.478 268 153 12 14 266 42 288 3.59e-13 68.9
MS.gene035412.t1 AT2G29350 25.424 236 147 8 40 265 3 219 2.70e-12 65.5
MS.gene035412.t1 AT3G42960 29.699 266 153 11 17 265 11 259 2.93e-12 66.2
MS.gene035412.t1 AT3G29260 29.699 266 152 13 14 265 6 250 5.64e-12 65.1
MS.gene035412.t1 AT2G29310 26.172 256 163 10 30 276 21 259 9.10e-12 64.7
MS.gene035412.t1 AT3G47350 36.893 103 64 1 12 113 42 144 9.56e-12 64.7
MS.gene035412.t1 AT3G03980 27.206 272 167 11 11 265 11 268 1.61e-11 63.9
MS.gene035412.t1 AT5G50690 28.141 199 132 3 12 209 43 231 5.83e-11 62.8
MS.gene035412.t1 AT5G50590 28.141 199 132 3 12 209 43 231 5.83e-11 62.8
MS.gene035412.t1 AT2G29320 25.296 253 168 8 30 275 11 249 6.96e-11 62.0
MS.gene035412.t1 AT5G50690 33.333 132 87 1 12 142 43 174 8.02e-11 61.6
MS.gene035412.t1 AT5G50590 33.333 132 87 1 12 142 43 174 8.02e-11 61.6

Find 86 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACCAATTGGTTCATTTC+TGG 0.141423 8.2:-52451421 None:intergenic
CGCTTTCGATTCCTGCTGTT+GGG 0.266199 8.2:+52447542 MS.gene035412:CDS
ATTAGTGCTACCTTGCATTA+TGG 0.276429 8.2:+52449020 MS.gene035412:CDS
ATGCCAGGAGTGTCACTTAT+TGG 0.283238 8.2:-52449384 None:intergenic
CCTTGCATTATGGAGCTTCT+TGG 0.293806 8.2:+52449030 MS.gene035412:CDS
ACTGGCGGAGCGTCGGGAAT+TGG 0.320337 8.2:+52447421 MS.gene035412:CDS
TTCAAACCAGAAATCTTAAA+AGG 0.320970 8.2:+52447382 MS.gene035412:CDS
GGCAAAGTAGCTTTAATAAC+TGG 0.335212 8.2:+52447403 MS.gene035412:CDS
TGTATAAACTTGGGGAGAAA+TGG 0.343265 8.2:+52449460 MS.gene035412:CDS
CCTCTGCTACCTATTTCTTC+AGG 0.344151 8.2:-52449420 None:intergenic
AAGAAACTTGGCACTGGAAT+GGG 0.348357 8.2:+52449320 MS.gene035412:CDS
ATTCCTGCTGTTGGGTTTGA+AGG 0.357334 8.2:+52447550 MS.gene035412:CDS
GTTTGAAATATCAACGCAAT+TGG 0.363203 8.2:+52447444 MS.gene035412:CDS
ACCTGTCTCACTGCCTCCTT+TGG 0.366952 8.2:-52451375 None:intergenic
AGTTCTTCAATCTGCGGTTT+CGG 0.369174 8.2:+52447510 MS.gene035412:CDS
TTAATAACTGGCGGAGCGTC+GGG 0.374098 8.2:+52447415 MS.gene035412:CDS
TTTGAAATATCAACGCAATT+GGG 0.380854 8.2:+52447445 MS.gene035412:CDS
TCGCTTTCGATTCCTGCTGT+TGG 0.383020 8.2:+52447541 MS.gene035412:CDS
CTGAGGATCTTTCGCCGAAT+GGG 0.391331 8.2:+52447683 MS.gene035412:CDS
CTGGCGGAGCGTCGGGAATT+GGG 0.395868 8.2:+52447422 MS.gene035412:CDS
GATTATGATATTCGAGTCAA+TGG 0.397358 8.2:+52449348 MS.gene035412:CDS
CACTCCTGGCATGAGTAAAC+TGG 0.411577 8.2:+52449395 MS.gene035412:CDS
AAACTGGCTCCTGAAGAAAT+AGG 0.417404 8.2:+52449411 MS.gene035412:CDS
TGTGAAGGAAAATACATTAA+CGG 0.419004 8.2:+52451300 MS.gene035412:intron
GTATAAACTTGGGGAGAAAT+GGG 0.441031 8.2:+52449461 MS.gene035412:CDS
ATGGAGGACTTTGGCTGAGC+CGG 0.441556 8.2:+52451340 MS.gene035412:CDS
TTTAATAACTGGCGGAGCGT+CGG 0.442410 8.2:+52447414 MS.gene035412:CDS
TGAAGGGGATGTGAGGAAGC+AGG 0.455697 8.2:+52447567 MS.gene035412:CDS
GCTGAGGATCTTTCGCCGAA+TGG 0.457228 8.2:+52447682 MS.gene035412:CDS
GGAGACACTATGATAGTTGA+TGG 0.460768 8.2:+52451321 MS.gene035412:CDS
ATTCTTGTTAATGCTGCTGC+TGG 0.464854 8.2:+52447643 MS.gene035412:CDS
CTCTTCTTAGCATCAGATGC+AGG 0.469651 8.2:+52449501 MS.gene035412:CDS
TTCCTGCTGTTGGGTTTGAA+GGG 0.470572 8.2:+52447551 MS.gene035412:CDS
GAAATGCCTCTGTATAAACT+TGG 0.470825 8.2:+52449450 MS.gene035412:CDS
TGGAGCGTCGGTTGCTGTGA+TGG 0.472642 8.2:+52447474 MS.gene035412:CDS
CAGGGTCATATTAGGTGTAA+TGG 0.474492 8.2:+52448323 MS.gene035412:intron
CACTTAAGTATCTCAAGAAA+GGG 0.475461 8.2:+52448955 MS.gene035412:CDS
GCCAAAGGAGGCAGTGAGAC+AGG 0.476361 8.2:+52451374 MS.gene035412:CDS
AGATCCAGAAATGAACCAAT+TGG 0.476611 8.2:+52451417 MS.gene035412:CDS
CAAGAAACTTGGCACTGGAA+TGG 0.477594 8.2:+52449319 MS.gene035412:CDS
GCACTTAAGTATCTCAAGAA+AGG 0.480331 8.2:+52448954 MS.gene035412:CDS
TTTAAGATTTCTGGTTTGAA+GGG 0.496175 8.2:-52447379 None:intergenic
TCACCAGTTCGAAACCCATT+CGG 0.500361 8.2:-52447697 None:intergenic
AAATGCCTCTGTATAAACTT+GGG 0.505018 8.2:+52449451 MS.gene035412:CDS
TGATTCTACTACAAGAAACT+TGG 0.507418 8.2:+52449308 MS.gene035412:CDS
CCGCTAGAAGAGTTCCTACC+AGG 0.507529 8.2:-52448981 None:intergenic
ATTATGATATTCGAGTCAAT+GGG 0.519870 8.2:+52449349 MS.gene035412:CDS
TGATAGTTGATGGAGGACTT+TGG 0.521104 8.2:+52451331 MS.gene035412:CDS
CTGGTAGGAACTCTTCTAGC+GGG 0.525188 8.2:+52448982 MS.gene035412:CDS
GGAGCCAGTTTACTCATGCC+AGG 0.525918 8.2:-52449399 None:intergenic
CGAGTCAATGGGATTGCACC+AGG 0.526292 8.2:+52449360 MS.gene035412:CDS
TACTACAAGAAACTTGGCAC+TGG 0.536669 8.2:+52449314 MS.gene035412:CDS
TTGGGTTTGAAGGGGATGTG+AGG 0.552630 8.2:+52447560 MS.gene035412:CDS
CGGTTGCTGTGATGGGTCGT+CGG 0.552646 8.2:+52447482 MS.gene035412:CDS
AATTCATGTATCTGCAGCAA+AGG 0.552785 8.2:+52449058 MS.gene035412:CDS
GGAGCGTCGGTTGCTGTGAT+GGG 0.554476 8.2:+52447475 MS.gene035412:CDS
TATCTCAAGAAAGGGGCACC+TGG 0.556489 8.2:+52448963 MS.gene035412:CDS
TTCTTGTTAATGCTGCTGCT+GGG 0.557653 8.2:+52447644 MS.gene035412:CDS
TCCCCTTCAAACCCAACAGC+AGG 0.558276 8.2:-52447553 None:intergenic
TCGAAACATGGTAGCTTCAA+CGG 0.561957 8.2:+52447351 None:intergenic
TCAACGCAATTGGGGAAACA+TGG 0.567028 8.2:+52447454 MS.gene035412:CDS
GCCACGTTATTTGCCAAAGG+AGG 0.568351 8.2:+52451362 MS.gene035412:CDS
TTGAAATATCAACGCAATTG+GGG 0.574459 8.2:+52447446 MS.gene035412:CDS
GGAGTGTCACTTATTGGACC+TGG 0.583283 8.2:-52449378 None:intergenic
TCCTGCTGTTGGGTTTGAAG+GGG 0.588047 8.2:+52447552 MS.gene035412:CDS
CCTGAAGAAATAGGTAGCAG+AGG 0.588385 8.2:+52449420 MS.gene035412:CDS
AGAAACTTGGCACTGGAATG+GGG 0.594972 8.2:+52449321 MS.gene035412:CDS
CCTTTGGCAAATAACGTGGC+CGG 0.597655 8.2:-52451359 None:intergenic
CCGGCCACGTTATTTGCCAA+AGG 0.598200 8.2:+52451359 MS.gene035412:CDS
TCAAGAAAGGGGCACCTGGT+AGG 0.602664 8.2:+52448967 MS.gene035412:CDS
AATGCCTCTGTATAAACTTG+GGG 0.607132 8.2:+52449452 MS.gene035412:CDS
CCAAGAAGCTCCATAATGCA+AGG 0.608499 8.2:-52449030 None:intergenic
GAAGCAAGTTCTTCAATCTG+CGG 0.609928 8.2:+52447504 MS.gene035412:CDS
TGTGAGGAAGCAGGAAGATG+CGG 0.618720 8.2:+52447576 MS.gene035412:CDS
TTCTCCCCAAGTTTATACAG+AGG 0.622115 8.2:-52449456 None:intergenic
TGGTAGGAACTCTTCTAGCG+GGG 0.631175 8.2:+52448983 MS.gene035412:CDS
GCCTCCTTTGGCAAATAACG+TGG 0.635341 8.2:-52451363 None:intergenic
GGTCCAATAAGTGACACTCC+TGG 0.636505 8.2:+52449381 MS.gene035412:CDS
ATTGGGGAAACATGGAGCGT+CGG 0.642414 8.2:+52447462 MS.gene035412:CDS
GGAGAAATGGGATATTGCAA+TGG 0.644314 8.2:+52449473 MS.gene035412:CDS
CCTGGTAGGAACTCTTCTAG+CGG 0.661737 8.2:+52448981 MS.gene035412:CDS
GGTAGGAACTCTTCTAGCGG+GGG 0.665696 8.2:+52448984 MS.gene035412:CDS
GTGTTGGATATCGATTCTGT+TGG 0.666144 8.2:+52448909 MS.gene035412:intron
AAAGTAGCTTTAATAACTGG+CGG 0.668949 8.2:+52447406 MS.gene035412:CDS
ACTTAAGTATCTCAAGAAAG+GGG 0.678718 8.2:+52448956 MS.gene035412:CDS
GACACTATGATAGTTGATGG+AGG 0.683950 8.2:+52451324 MS.gene035412:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGAAAAAAAAAAAAAAAAAA+AGG - chr8.2:52450917-52450936 None:intergenic 10.0%
!!! ATTTTCATCTTTTTAATTTA+AGG + chr8.2:52449108-52449127 MS.gene035412:intron 10.0%
!!! ATTTTTTATTTATTTGTCTA+TGG + chr8.2:52451256-52451275 MS.gene035412:intron 10.0%
!!! TTTTTAATTTAAGGATTTAA+AGG + chr8.2:52449117-52449136 MS.gene035412:intron 10.0%
!! AAAAAAAAAAGGTAAAGATT+TGG - chr8.2:52450906-52450925 None:intergenic 15.0%
!! AAAAAAAAAGGTAAAGATTT+GGG - chr8.2:52450905-52450924 None:intergenic 15.0%
!! AATTTATATTTGTGGTATAA+GGG - chr8.2:52449854-52449873 None:intergenic 15.0%
!! ACAAGATATTATGTAATTAT+AGG + chr8.2:52449783-52449802 MS.gene035412:intron 15.0%
!! CAAGATATTATGTAATTATA+GGG + chr8.2:52449784-52449803 MS.gene035412:intron 15.0%
!! TAAAACAAATAATGCATAAA+AGG - chr8.2:52449819-52449838 None:intergenic 15.0%
!!! ATATGTAGATTTTAAAATCA+AGG - chr8.2:52448400-52448419 None:intergenic 15.0%
!!! CTAAATTTTAATTATTCAAC+AGG + chr8.2:52449278-52449297 MS.gene035412:intron 15.0%
!!! GCAAAATAATATATTTTCAT+TGG - chr8.2:52449181-52449200 None:intergenic 15.0%
!!! TAAGTATTTCTTTCATTTTA+AGG - chr8.2:52447769-52447788 None:intergenic 15.0%
!!! TAATAAATCTAGAATACATA+AGG - chr8.2:52450983-52451002 None:intergenic 15.0%
!!! TTTATGCATTATTTGTTTTA+TGG + chr8.2:52449819-52449838 MS.gene035412:intron 15.0%
!! AAACATTATAAACACTACAT+AGG + chr8.2:52450747-52450766 MS.gene035412:intron 20.0%
!! ATTTGAATTGCATAAAATCA+TGG + chr8.2:52448427-52448446 MS.gene035412:intron 20.0%
!! CAATTTATATTTGTGGTATA+AGG - chr8.2:52449855-52449874 None:intergenic 20.0%
!! GTTAAAAGTAAGAGTTTAAT+AGG - chr8.2:52449257-52449276 None:intergenic 20.0%
!! TATACCACAAATATAAATTG+TGG + chr8.2:52449855-52449874 MS.gene035412:intron 20.0%
!! TATTGCAAAATTATGCAAAA+TGG - chr8.2:52449901-52449920 None:intergenic 20.0%
!! TTAAATAAAACATACGATCA+GGG - chr8.2:52450131-52450150 None:intergenic 20.0%
!! TTAATTCAATCTTACAAAAC+CGG + chr8.2:52450703-52450722 MS.gene035412:intron 20.0%
!! TTTAAATAAAACATACGATC+AGG - chr8.2:52450132-52450151 None:intergenic 20.0%
!!! AAATTCTACAACTTTTTGAA+TGG - chr8.2:52448556-52448575 None:intergenic 20.0%
!!! AATGATTTTGCAATAATCTA+CGG - chr8.2:52448615-52448634 None:intergenic 20.0%
!!! ATGTAGTGTTTATAATGTTT+TGG - chr8.2:52450747-52450766 None:intergenic 20.0%
!!! ATTTGACTTTTAAGCATTTT+GGG + chr8.2:52447611-52447630 MS.gene035412:CDS 20.0%
! AAAGATGAAAATGAACATCT+AGG - chr8.2:52449100-52449119 None:intergenic 25.0%
! AACATCGTTTAAATTTGTGA+AGG + chr8.2:52451285-52451304 MS.gene035412:intron 25.0%
! AAGTTATGAAAATGTTTCCA+AGG - chr8.2:52449615-52449634 None:intergenic 25.0%
! AATACATTTCTTAGAAATCG+AGG - chr8.2:52447904-52447923 None:intergenic 25.0%
! ACTTACTTAACCGTTTAAAA+AGG - chr8.2:52448004-52448023 None:intergenic 25.0%
! AGATGTATAAACTATGAGAA+GGG - chr8.2:52450206-52450225 None:intergenic 25.0%
! AGTATTCAGTGAGTAAAAAT+GGG - chr8.2:52451162-52451181 None:intergenic 25.0%
! ATGATAGCAATGATGAAATA+AGG - chr8.2:52451077-52451096 None:intergenic 25.0%
! ATTATGATATTCGAGTCAAT+GGG + chr8.2:52449349-52449368 MS.gene035412:CDS 25.0%
! CATGATTAATTAGTAGTGTT+CGG + chr8.2:52449670-52449689 MS.gene035412:intron 25.0%
! GGCTAAACAACTTAAAAAAA+AGG - chr8.2:52447983-52448002 None:intergenic 25.0%
! GGTTAATTAAGTTCAATTGA+TGG + chr8.2:52448448-52448467 MS.gene035412:intron 25.0%
! GTTAATCATGTTTAAATCTG+TGG - chr8.2:52448378-52448397 None:intergenic 25.0%
! TAGTATTCAGTGAGTAAAAA+TGG - chr8.2:52451163-52451182 None:intergenic 25.0%
! TGTAAATTAGATAAGAGTCT+TGG - chr8.2:52448808-52448827 None:intergenic 25.0%
! TGTGAAGGAAAATACATTAA+CGG + chr8.2:52451300-52451319 MS.gene035412:intron 25.0%
! TTATGTAATTATAGGGAAGT+AGG + chr8.2:52449791-52449810 MS.gene035412:intron 25.0%
! TTCAAACCAGAAATCTTAAA+AGG + chr8.2:52447382-52447401 MS.gene035412:CDS 25.0%
!! AACTTTTTGAATGGTTAACA+CGG - chr8.2:52448547-52448566 None:intergenic 25.0%
!! AGAATAAATCAGTTTTACAC+TGG + chr8.2:52449152-52449171 MS.gene035412:intron 25.0%
!! ATGCTATTTGAACATCAATT+TGG - chr8.2:52448585-52448604 None:intergenic 25.0%
!! CATTTCTCGTATTCAATTTT+AGG - chr8.2:52448858-52448877 None:intergenic 25.0%
!! TATAAGTTTTTATCCAAGCA+GGG + chr8.2:52448305-52448324 MS.gene035412:intron 25.0%
!! TCATCACAAATACTCTATTT+TGG + chr8.2:52450534-52450553 MS.gene035412:intron 25.0%
!! TGATAAAAACAACTTTTGCA+AGG + chr8.2:52451026-52451045 MS.gene035412:intron 25.0%
!! TTATAAGTTTTTATCCAAGC+AGG + chr8.2:52448304-52448323 MS.gene035412:intron 25.0%
!! TTTGAAATATCAACGCAATT+GGG + chr8.2:52447445-52447464 MS.gene035412:CDS 25.0%
!!! AAAGTGAAAAGGTTATTTCT+AGG - chr8.2:52450640-52450659 None:intergenic 25.0%
!!! AGCTTTGGTTAATAGATTTT+GGG + chr8.2:52448048-52448067 MS.gene035412:intron 25.0%
!!! AGTTGTTTAGCCTTTTTAAA+CGG + chr8.2:52447991-52448010 MS.gene035412:intron 25.0%
!!! ATAAGTTTTGTAAGGTTGTT+TGG + chr8.2:52448108-52448127 MS.gene035412:intron 25.0%
!!! CTACTATCATAAGTTTTGTA+AGG + chr8.2:52448100-52448119 MS.gene035412:intron 25.0%
!!! CTGTAAATGTTGTATTTTTG+TGG + chr8.2:52449575-52449594 MS.gene035412:intron 25.0%
!!! GATTTGACTTTTAAGCATTT+TGG + chr8.2:52447610-52447629 MS.gene035412:CDS 25.0%
!!! GCTCTAACAAAATTTTAAGA+AGG - chr8.2:52450683-52450702 None:intergenic 25.0%
!!! TAAGTTTTGTAAGGTTGTTT+GGG + chr8.2:52448109-52448128 MS.gene035412:intron 25.0%
!!! TCATGATTTTTTTGACATGT+TGG + chr8.2:52449981-52450000 MS.gene035412:intron 25.0%
!!! TTATTTCTAGGTGATCTAAA+TGG - chr8.2:52450628-52450647 None:intergenic 25.0%
!!! TTTAAGATTTCTGGTTTGAA+GGG - chr8.2:52447382-52447401 None:intergenic 25.0%
!!! TTTTAAGATTTCTGGTTTGA+AGG - chr8.2:52447383-52447402 None:intergenic 25.0%
AAATGCCTCTGTATAAACTT+GGG + chr8.2:52449451-52449470 MS.gene035412:CDS 30.0%
ACAAAGACAGTAAAGTGAAA+AGG - chr8.2:52450651-52450670 None:intergenic 30.0%
ACATGACTTAGTTGAATGAA+GGG - chr8.2:52450323-52450342 None:intergenic 30.0%
ACTTAAGTATCTCAAGAAAG+GGG + chr8.2:52448956-52448975 MS.gene035412:CDS 30.0%
AGCTTACGAAAACAACTTAT+AGG + chr8.2:52448203-52448222 MS.gene035412:intron 30.0%
ATACATAAGGCTTCAAAGTT+TGG - chr8.2:52450970-52450989 None:intergenic 30.0%
ATCAGAATCCTTCTATAATG+TGG + chr8.2:52448749-52448768 MS.gene035412:intron 30.0%
ATTAATTAGTAGTGTTCGGT+TGG + chr8.2:52449674-52449693 MS.gene035412:intron 30.0%
ATTTCTTAGAAATCGAGGTT+GGG - chr8.2:52447899-52447918 None:intergenic 30.0%
CACTTAAGTATCTCAAGAAA+GGG + chr8.2:52448955-52448974 MS.gene035412:CDS 30.0%
GACACCACAATTTATATTTG+TGG - chr8.2:52449862-52449881 None:intergenic 30.0%
GAGATGTATAAACTATGAGA+AGG - chr8.2:52450207-52450226 None:intergenic 30.0%
GATTATGATATTCGAGTCAA+TGG + chr8.2:52449348-52449367 MS.gene035412:CDS 30.0%
TAAATGGTCATATACATGAG+AGG - chr8.2:52450612-52450631 None:intergenic 30.0%
TATATTTGTGGTATAAGGGT+AGG - chr8.2:52449850-52449869 None:intergenic 30.0%
TATTAAAGAGTGGAAGACAA+AGG - chr8.2:52450447-52450466 None:intergenic 30.0%
TGATTCTACTACAAGAAACT+TGG + chr8.2:52449308-52449327 MS.gene035412:CDS 30.0%
TGCAATACGTATTTAAACCT+TGG + chr8.2:52449914-52449933 MS.gene035412:intron 30.0%
TTAATTAGTAGTGTTCGGTT+GGG + chr8.2:52449675-52449694 MS.gene035412:intron 30.0%
TTCATTATTGTTTGCAGTGT+TGG + chr8.2:52448893-52448912 MS.gene035412:intron 30.0%
TTGAAATATCAACGCAATTG+GGG + chr8.2:52447446-52447465 MS.gene035412:CDS 30.0%
TTGAATAAGTGTCTATACGT+GGG + chr8.2:52447829-52447848 MS.gene035412:intron 30.0%
TTGCAATTTCGATGCATTTA+GGG + chr8.2:52447923-52447942 MS.gene035412:intron 30.0%
TTTGAATAAGTGTCTATACG+TGG + chr8.2:52447828-52447847 MS.gene035412:intron 30.0%
TTTGCAATTTCGATGCATTT+AGG + chr8.2:52447922-52447941 MS.gene035412:intron 30.0%
! GTAGTGAAACTAGAAAGTAT+AGG + chr8.2:52449757-52449776 MS.gene035412:intron 30.0%
! GTTTGAAATATCAACGCAAT+TGG + chr8.2:52447444-52447463 MS.gene035412:CDS 30.0%
! TAAAAACAACTTTTGCAAGG+TGG + chr8.2:52451029-52451048 MS.gene035412:intron 30.0%
! TTGGGAAGATATAAAAGTGT+TGG - chr8.2:52450887-52450906 None:intergenic 30.0%
!! AAAGTAGCTTTAATAACTGG+CGG + chr8.2:52447406-52447425 MS.gene035412:CDS 30.0%
!! AATGAAGGGTATTGCAATAT+GGG - chr8.2:52450309-52450328 None:intergenic 30.0%
!! CAGCTTTGGTTAATAGATTT+TGG + chr8.2:52448047-52448066 MS.gene035412:intron 30.0%
!! GTTATGTTTGTTTCTGTTCA+AGG + chr8.2:52450094-52450113 MS.gene035412:intron 30.0%
!! GTTGTTTTCGTAAGCTATAT+AGG - chr8.2:52448199-52448218 None:intergenic 30.0%
!!! ACTTTGCCTTTTAAGATTTC+TGG - chr8.2:52447391-52447410 None:intergenic 30.0%
AATGCCTCTGTATAAACTTG+GGG + chr8.2:52449452-52449471 MS.gene035412:CDS 35.0%
AATTCATGTATCTGCAGCAA+AGG + chr8.2:52449058-52449077 MS.gene035412:CDS 35.0%
ACAAAGGCTCTATAAGAGAA+AGG - chr8.2:52450431-52450450 None:intergenic 35.0%
ACTAACGAAAAACAGCTTTG+AGG - chr8.2:52447737-52447756 None:intergenic 35.0%
AGATCCAGAAATGAACCAAT+TGG + chr8.2:52451417-52451436 MS.gene035412:CDS 35.0%
AGCATTTGAAAGTCTATAGC+AGG - chr8.2:52450244-52450263 None:intergenic 35.0%
AGGATACTAAAGACACTATG+TGG - chr8.2:52447963-52447982 None:intergenic 35.0%
ATGAGTCGAGACAATTAAAG+AGG - chr8.2:52450510-52450529 None:intergenic 35.0%
ATTAGTGCTACCTTGCATTA+TGG + chr8.2:52449020-52449039 MS.gene035412:CDS 35.0%
CAATAGCATAGTTCAATGAG+TGG - chr8.2:52448508-52448527 None:intergenic 35.0%
CATAGTTTATACATCTCACC+TGG + chr8.2:52450210-52450229 MS.gene035412:intron 35.0%
CATTTCTTAGAAATCGAGGT+TGG - chr8.2:52447900-52447919 None:intergenic 35.0%
CTGAATACTAACCATGTAGT+TGG + chr8.2:52451173-52451192 MS.gene035412:intron 35.0%
GAAATGCCTCTGTATAAACT+TGG + chr8.2:52449450-52449469 MS.gene035412:CDS 35.0%
GACATGACTTAGTTGAATGA+AGG - chr8.2:52450324-52450343 None:intergenic 35.0%
GCACTTAAGTATCTCAAGAA+AGG + chr8.2:52448954-52448973 MS.gene035412:CDS 35.0%
GGATACTAAAGACACTATGT+GGG - chr8.2:52447962-52447981 None:intergenic 35.0%
GTATAAACTTGGGGAGAAAT+GGG + chr8.2:52449461-52449480 MS.gene035412:CDS 35.0%
GTTGTTAAAGAGTCTCACAT+CGG + chr8.2:52447794-52447813 MS.gene035412:intron 35.0%
TCCATTTCAAACCAACTACA+TGG - chr8.2:52451187-52451206 None:intergenic 35.0%
TGAATAAGTGTCTATACGTG+GGG + chr8.2:52447830-52447849 MS.gene035412:intron 35.0%
TGCAATTTCGATGCATTTAG+GGG + chr8.2:52447924-52447943 MS.gene035412:intron 35.0%
TGTATAAACTTGGGGAGAAA+TGG + chr8.2:52449460-52449479 MS.gene035412:CDS 35.0%
TTAACCGTCATCGAGTAATA+TGG - chr8.2:52450477-52450496 None:intergenic 35.0%
! AACACCAATTGGTTCATTTC+TGG - chr8.2:52451424-52451443 None:intergenic 35.0%
! ACAAAGGCTCTTTAAGAGAA+AGG - chr8.2:52450400-52450419 None:intergenic 35.0%
! ACTACTCATCTGAAACACAA+TGG - chr8.2:52448781-52448800 None:intergenic 35.0%
! AGAGAAAGGTTTTCATGAGA+TGG - chr8.2:52450386-52450405 None:intergenic 35.0%
! CTAGGGGTATACTATATTGA+AGG + chr8.2:52450853-52450872 MS.gene035412:intron 35.0%
! GAACTGGTGAGTAGTTATTT+TGG + chr8.2:52447710-52447729 MS.gene035412:intron 35.0%
! GGTTTTTGAATTCCATGCTT+GGG + chr8.2:52449705-52449724 MS.gene035412:intron 35.0%
! TGACTTTTAAGCATTTTGGG+AGG + chr8.2:52447614-52447633 MS.gene035412:CDS 35.0%
! TGGTTTTTGAATTCCATGCT+TGG + chr8.2:52449704-52449723 MS.gene035412:intron 35.0%
! TTGGTTAATAGATTTTGGGC+TGG + chr8.2:52448052-52448071 MS.gene035412:intron 35.0%
!! ACCATGTAGTTGGTTTGAAA+TGG + chr8.2:52451183-52451202 MS.gene035412:intron 35.0%
!! CTACTTCTCATTGACTTTGA+AGG - chr8.2:52449638-52449657 None:intergenic 35.0%
!! GAATGAAGGGTATTGCAATA+TGG - chr8.2:52450310-52450329 None:intergenic 35.0%
!! GGCAAAGTAGCTTTAATAAC+TGG + chr8.2:52447403-52447422 MS.gene035412:CDS 35.0%
!!! TAATAGATTTTGGGCTGGTT+TGG + chr8.2:52448057-52448076 MS.gene035412:intron 35.0%
!!! TTGCTTTTTGGAACACCAAT+TGG - chr8.2:52451435-52451454 None:intergenic 35.0%
AGGCTTCAAAGTTTGGTATC+AGG - chr8.2:52450963-52450982 None:intergenic 40.0%
AGTATCGCATACACCAAGTA+GGG - chr8.2:52449557-52449576 None:intergenic 40.0%
AGTTCTTCAATCTGCGGTTT+CGG + chr8.2:52447510-52447529 MS.gene035412:CDS 40.0%
ATGCTATTGCTAACCACATG+CGG + chr8.2:52448519-52448538 MS.gene035412:intron 40.0%
ATGGATGTCTTTGTAACCCT+AGG + chr8.2:52451202-52451221 MS.gene035412:intron 40.0%
ATTCTTGTTAATGCTGCTGC+TGG + chr8.2:52447643-52447662 MS.gene035412:CDS 40.0%
CAGGGTCATATTAGGTGTAA+TGG + chr8.2:52448323-52448342 MS.gene035412:intron 40.0%
GAAGCAAGTTCTTCAATCTG+CGG + chr8.2:52447504-52447523 MS.gene035412:CDS 40.0%
GAATAAGTGTCTATACGTGG+GGG + chr8.2:52447831-52447850 MS.gene035412:intron 40.0%
GGAGAAATGGGATATTGCAA+TGG + chr8.2:52449473-52449492 MS.gene035412:CDS 40.0%
GGAGACACTATGATAGTTGA+TGG + chr8.2:52451321-52451340 MS.gene035412:CDS 40.0%
GGTCATTGCCACATTATAGA+AGG - chr8.2:52448760-52448779 None:intergenic 40.0%
GTAGAACTGAAAAGAAGCCA+AGG - chr8.2:52449934-52449953 None:intergenic 40.0%
TACTACAAGAAACTTGGCAC+TGG + chr8.2:52449314-52449333 MS.gene035412:CDS 40.0%
TATCCAAGCAGGGTCATATT+AGG + chr8.2:52448315-52448334 MS.gene035412:intron 40.0%
TCAGGACATATAGACTGCAA+CGG - chr8.2:52450945-52450964 None:intergenic 40.0%
TGACTCACGTGTAAATGAAG+TGG + chr8.2:52448024-52448043 MS.gene035412:intron 40.0%
TGTAAATGAAGTGGCAGCTT+TGG + chr8.2:52448033-52448052 MS.gene035412:intron 40.0%
TTATCCAAGTGTTCCCTACT+TGG + chr8.2:52449541-52449560 MS.gene035412:intron 40.0%
TTCAATCTTACAAAACCGGC+TGG + chr8.2:52450707-52450726 MS.gene035412:intron 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - chr8.2:52450806-52450825 None:intergenic 40.0%
TTCTCCCCAAGTTTATACAG+AGG - chr8.2:52449459-52449478 None:intergenic 40.0%
TTCTTGTTAATGCTGCTGCT+GGG + chr8.2:52447644-52447663 MS.gene035412:CDS 40.0%
TTGTCTGTGACAAGTCTCAA+AGG - chr8.2:52448704-52448723 None:intergenic 40.0%
TTTGTGGTATAAGGGTAGGA+AGG - chr8.2:52449846-52449865 None:intergenic 40.0%
! AAACTGGCTCCTGAAGAAAT+AGG + chr8.2:52449411-52449430 MS.gene035412:CDS 40.0%
! AAGAAACTTGGCACTGGAAT+GGG + chr8.2:52449320-52449339 MS.gene035412:CDS 40.0%
! AGTCACTGTTTGAGATACCT+AGG - chr8.2:52451222-52451241 None:intergenic 40.0%
! GAGAAAGGTTTTCACGACAA+AGG - chr8.2:52450416-52450435 None:intergenic 40.0%
! GTCACTGTTTGAGATACCTA+GGG - chr8.2:52451221-52451240 None:intergenic 40.0%
!! AAAGAAGTGCTGATGACATG+TGG - chr8.2:52450350-52450369 None:intergenic 40.0%
!! GACACTATGATAGTTGATGG+AGG + chr8.2:52451324-52451343 MS.gene035412:CDS 40.0%
!! GTGTTGGATATCGATTCTGT+TGG + chr8.2:52448909-52448928 MS.gene035412:intron 40.0%
!! TAACGCAGAGAAGCATTGAA+AGG - chr8.2:52449956-52449975 None:intergenic 40.0%
!! TGATAGTTGATGGAGGACTT+TGG + chr8.2:52451331-52451350 MS.gene035412:CDS 40.0%
ACACCTAATATGACCCTGCT+TGG - chr8.2:52448321-52448340 None:intergenic 45.0%
ACCAAAGCAAAACCCAAGCA+TGG - chr8.2:52449720-52449739 None:intergenic 45.0%
ACCGTCATCGAGTAATATGG+TGG - chr8.2:52450474-52450493 None:intergenic 45.0%
ACTACATAGGCCATGTCTCT+AGG + chr8.2:52450760-52450779 MS.gene035412:intron 45.0%
ATATAGACTGCAACGGGAGT+AGG - chr8.2:52450938-52450957 None:intergenic 45.0%
ATTCCTGCTGTTGGGTTTGA+AGG + chr8.2:52447550-52447569 MS.gene035412:CDS 45.0%
CAGGACATATAGACTGCAAC+GGG - chr8.2:52450944-52450963 None:intergenic 45.0%
CAGTATCGCATACACCAAGT+AGG - chr8.2:52449558-52449577 None:intergenic 45.0%
CCAAGAAGCTCCATAATGCA+AGG - chr8.2:52449033-52449052 None:intergenic 45.0%
CCTGAAGAAATAGGTAGCAG+AGG + chr8.2:52449420-52449439 MS.gene035412:CDS 45.0%
CCTTGCATTATGGAGCTTCT+TGG + chr8.2:52449030-52449049 MS.gene035412:CDS 45.0%
CTAACGAGAGTAGAGTGATG+TGG - chr8.2:52449203-52449222 None:intergenic 45.0%
CTAATACAACCCCACGAAAC+CGG - chr8.2:52447875-52447894 None:intergenic 45.0%
CTATAGCAGGATTACAGACC+AGG - chr8.2:52450231-52450250 None:intergenic 45.0%
CTCTTCTTAGCATCAGATGC+AGG + chr8.2:52449501-52449520 MS.gene035412:CDS 45.0%
CTTCACACCCAACACAATGA+AGG + chr8.2:52450805-52450824 MS.gene035412:intron 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr8.2:52450807-52450826 None:intergenic 45.0%
GCCACCATATTACTCGATGA+CGG + chr8.2:52450470-52450489 MS.gene035412:intron 45.0%
TACACCAAGTAGGGAACACT+TGG - chr8.2:52449548-52449567 None:intergenic 45.0%
TCAACGCAATTGGGGAAACA+TGG + chr8.2:52447454-52447473 MS.gene035412:CDS 45.0%
TCACCAGTTCGAAACCCATT+CGG - chr8.2:52447700-52447719 None:intergenic 45.0%
TCATTGTGTTGGGTGTGAAG+GGG - chr8.2:52450805-52450824 None:intergenic 45.0%
TCTTACAAAACCGGCTGGTA+AGG + chr8.2:52450712-52450731 MS.gene035412:intron 45.0%
TGCTATTGCTAACCACATGC+GGG + chr8.2:52448520-52448539 MS.gene035412:intron 45.0%
TGGGTTGCCTTCATTGTGTT+GGG - chr8.2:52450815-52450834 None:intergenic 45.0%
TGGTGACTATCTGAAAGCCT+TGG + chr8.2:52449595-52449614 MS.gene035412:intron 45.0%
TGGTGGCAGCTATTAAAGAG+TGG - chr8.2:52450457-52450476 None:intergenic 45.0%
TTCCTGCTGTTGGGTTTGAA+GGG + chr8.2:52447551-52447570 MS.gene035412:CDS 45.0%
TTGCTGCAATTAGGTGGCTA+GGG + chr8.2:52450836-52450855 MS.gene035412:intron 45.0%
TTTAATAACTGGCGGAGCGT+CGG + chr8.2:52447414-52447433 MS.gene035412:CDS 45.0%
! AGAAACTTGGCACTGGAATG+GGG + chr8.2:52449321-52449340 MS.gene035412:CDS 45.0%
! CAAGAAACTTGGCACTGGAA+TGG + chr8.2:52449319-52449338 MS.gene035412:CDS 45.0%
! CCTCTGCTACCTATTTCTTC+AGG - chr8.2:52449423-52449442 None:intergenic 45.0%
! GAATTTTCTTGCTGCTGCTG+AGG + chr8.2:52447666-52447685 MS.gene035412:CDS 45.0%
! TCCATGCTTGGGTTTTGCTT+TGG + chr8.2:52449716-52449735 MS.gene035412:intron 45.0%
!! ATGCCAGGAGTGTCACTTAT+TGG - chr8.2:52449387-52449406 None:intergenic 45.0%
!! TTGGTGACAGTCTAGCTTTC+TGG + chr8.2:52449735-52449754 MS.gene035412:intron 45.0%
!!! GATTTTGGGCTGGTTTGGAT+TGG + chr8.2:52448062-52448081 MS.gene035412:intron 45.0%
!! ACAAATAAATAAAAAATTAA+AGG - chr8.2:52451253-52451272 None:intergenic 5.0%
AAAACCGGCTGGTAAGGTGA+AGG + chr8.2:52450718-52450737 MS.gene035412:intron 50.0%
AGCCACCTAATTGCAGCAAG+TGG - chr8.2:52450835-52450854 None:intergenic 50.0%
ATTGGGGAAACATGGAGCGT+CGG + chr8.2:52447462-52447481 MS.gene035412:CDS 50.0%
CACTCCTGGCATGAGTAAAC+TGG + chr8.2:52449395-52449414 MS.gene035412:CDS 50.0%
CCTGGTAGGAACTCTTCTAG+CGG + chr8.2:52448981-52449000 MS.gene035412:CDS 50.0%
CCTTTGGCAAATAACGTGGC+CGG - chr8.2:52451362-52451381 None:intergenic 50.0%
CGCTTTCGATTCCTGCTGTT+GGG + chr8.2:52447542-52447561 MS.gene035412:CDS 50.0%
CTGAGGATCTTTCGCCGAAT+GGG + chr8.2:52447683-52447702 MS.gene035412:CDS 50.0%
CTGGTAGGAACTCTTCTAGC+GGG + chr8.2:52448982-52449001 MS.gene035412:CDS 50.0%
CTTGCTGCAATTAGGTGGCT+AGG + chr8.2:52450835-52450854 MS.gene035412:intron 50.0%
GCCACCTAATTGCAGCAAGT+GGG - chr8.2:52450834-52450853 None:intergenic 50.0%
GCCACGTTATTTGCCAAAGG+AGG + chr8.2:52451362-52451381 MS.gene035412:CDS 50.0%
GCCTCCTTTGGCAAATAACG+TGG - chr8.2:52451366-52451385 None:intergenic 50.0%
GGTCCAATAAGTGACACTCC+TGG + chr8.2:52449381-52449400 MS.gene035412:CDS 50.0%
GTAACCTTCACCTTACCAGC+CGG - chr8.2:52450725-52450744 None:intergenic 50.0%
TCCTGCTGTTGGGTTTGAAG+GGG + chr8.2:52447552-52447571 MS.gene035412:CDS 50.0%
TCGCTTTCGATTCCTGCTGT+TGG + chr8.2:52447541-52447560 MS.gene035412:CDS 50.0%
TCTCATGCTGCCTAGAGACA+TGG - chr8.2:52450773-52450792 None:intergenic 50.0%
TGCTGCAATTAGGTGGCTAG+GGG + chr8.2:52450837-52450856 MS.gene035412:intron 50.0%
TGGTAGGAACTCTTCTAGCG+GGG + chr8.2:52448983-52449002 MS.gene035412:CDS 50.0%
TGTGAGGAAGCAGGAAGATG+CGG + chr8.2:52447576-52447595 MS.gene035412:CDS 50.0%
TTGGGTTTGAAGGGGATGTG+AGG + chr8.2:52447560-52447579 MS.gene035412:CDS 50.0%
! ACCCACTTGCTGCAATTAGG+TGG + chr8.2:52450830-52450849 MS.gene035412:intron 50.0%
! GCAACCCACTTGCTGCAATT+AGG + chr8.2:52450827-52450846 MS.gene035412:intron 50.0%
! GTGGGTTGCCTTCATTGTGT+TGG - chr8.2:52450816-52450835 None:intergenic 50.0%
! TTAATAACTGGCGGAGCGTC+GGG + chr8.2:52447415-52447434 MS.gene035412:CDS 50.0%
!! GGAGTGTCACTTATTGGACC+TGG - chr8.2:52449381-52449400 None:intergenic 50.0%
!! TATCTCAAGAAAGGGGCACC+TGG + chr8.2:52448963-52448982 MS.gene035412:CDS 50.0%
ACCTGTCTCACTGCCTCCTT+TGG - chr8.2:52451378-52451397 None:intergenic 55.0%
AGTGTTCGGTTGGGACTTGC+TGG + chr8.2:52449684-52449703 MS.gene035412:intron 55.0%
CCGCTAGAAGAGTTCCTACC+AGG - chr8.2:52448984-52449003 None:intergenic 55.0%
CCGGCCACGTTATTTGCCAA+AGG + chr8.2:52451359-52451378 MS.gene035412:CDS 55.0%
CGAGTCAATGGGATTGCACC+AGG + chr8.2:52449360-52449379 MS.gene035412:CDS 55.0%
GCAATCCTCACCTCACATGC+CGG + chr8.2:52447853-52447872 MS.gene035412:intron 55.0%
GCTGAGGATCTTTCGCCGAA+TGG + chr8.2:52447682-52447701 MS.gene035412:CDS 55.0%
GGAGCCAGTTTACTCATGCC+AGG - chr8.2:52449402-52449421 None:intergenic 55.0%
GGTAGGAACTCTTCTAGCGG+GGG + chr8.2:52448984-52449003 MS.gene035412:CDS 55.0%
TCCCCTTCAAACCCAACAGC+AGG - chr8.2:52447556-52447575 None:intergenic 55.0%
TGAAGGGGATGTGAGGAAGC+AGG + chr8.2:52447567-52447586 MS.gene035412:CDS 55.0%
TTGTGTTGGGTGTGAAGGGG+TGG - chr8.2:52450802-52450821 None:intergenic 55.0%
! TCGCCGAATGGGTTTCGAAC+TGG + chr8.2:52447694-52447713 MS.gene035412:intron 55.0%
!! ACCTCACATGCCGGTTTCGT+GGG + chr8.2:52447862-52447881 MS.gene035412:intron 55.0%
!! TCAAGAAAGGGGCACCTGGT+AGG + chr8.2:52448967-52448986 MS.gene035412:CDS 55.0%
CGAAACCGGCATGTGAGGTG+AGG - chr8.2:52447861-52447880 None:intergenic 60.0%
GCCAAAGGAGGCAGTGAGAC+AGG + chr8.2:52451374-52451393 MS.gene035412:CDS 60.0%
GGTTAACACGGTCCCGCATG+TGG - chr8.2:52448535-52448554 None:intergenic 60.0%
!! CACCTCACATGCCGGTTTCG+TGG + chr8.2:52447861-52447880 MS.gene035412:intron 60.0%
!! CCTCACATGCCGGTTTCGTG+GGG + chr8.2:52447863-52447882 MS.gene035412:intron 60.0%
!! CGGTTGCTGTGATGGGTCGT+CGG + chr8.2:52447482-52447501 MS.gene035412:CDS 60.0%
!! GGAGCGTCGGTTGCTGTGAT+GGG + chr8.2:52447475-52447494 MS.gene035412:CDS 60.0%
!! TGGAGCGTCGGTTGCTGTGA+TGG + chr8.2:52447474-52447493 MS.gene035412:CDS 60.0%
CCCCACGAAACCGGCATGTG+AGG - chr8.2:52447866-52447885 None:intergenic 65.0%
!! ACTGGCGGAGCGTCGGGAAT+TGG + chr8.2:52447421-52447440 MS.gene035412:CDS 65.0%
!! CTGGCGGAGCGTCGGGAATT+GGG + chr8.2:52447422-52447441 MS.gene035412:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 52447358 52451461 52447358 ID=MS.gene035412
chr8.2 mRNA 52447358 52451461 52447358 ID=MS.gene035412.t1;Parent=MS.gene035412
chr8.2 exon 52447358 52447704 52447358 ID=MS.gene035412.t1.exon1;Parent=MS.gene035412.t1
chr8.2 CDS 52447358 52447704 52447358 ID=cds.MS.gene035412.t1;Parent=MS.gene035412.t1
chr8.2 exon 52448337 52448350 52448337 ID=MS.gene035412.t1.exon2;Parent=MS.gene035412.t1
chr8.2 CDS 52448337 52448350 52448337 ID=cds.MS.gene035412.t1;Parent=MS.gene035412.t1
chr8.2 exon 52448910 52449079 52448910 ID=MS.gene035412.t1.exon3;Parent=MS.gene035412.t1
chr8.2 CDS 52448910 52449079 52448910 ID=cds.MS.gene035412.t1;Parent=MS.gene035412.t1
chr8.2 exon 52449300 52449522 52449300 ID=MS.gene035412.t1.exon4;Parent=MS.gene035412.t1
chr8.2 CDS 52449300 52449522 52449300 ID=cds.MS.gene035412.t1;Parent=MS.gene035412.t1
chr8.2 exon 52451307 52451461 52451307 ID=MS.gene035412.t1.exon5;Parent=MS.gene035412.t1
chr8.2 CDS 52451307 52451461 52451307 ID=cds.MS.gene035412.t1;Parent=MS.gene035412.t1
Gene Sequence

>MS.gene035412

ATGGTAGCTTCAACGGAATCACCCTTCAAACCAGAAATCTTAAAAGGCAAAGTAGCTTTAATAACTGGCGGAGCGTCGGGAATTGGGTTTGAAATATCAACGCAATTGGGGAAACATGGAGCGTCGGTTGCTGTGATGGGTCGTCGGAAGCAAGTTCTTCAATCTGCGGTTTCGGTTCTTCAATCGCTTTCGATTCCTGCTGTTGGGTTTGAAGGGGATGTGAGGAAGCAGGAAGATGCGGCGAGAGTTGTTGATTTGACTTTTAAGCATTTTGGGAGGATTGATATTCTTGTTAATGCTGCTGCTGGGAATTTTCTTGCTGCTGCTGAGGATCTTTCGCCGAATGGGTTTCGAACTGGTGAGTAGTTATTTTGGTCCTCAAAGCTGTTTTTCGTTAGTCAATTTAGTCCTTAAAATGAAAGAAATACTTATGAATGTTGTTAAAGAGTCTCACATCGGTTGAGAGATGATTTGAATAAGTGTCTATACGTGGGGGCAATCCTCACCTCACATGCCGGTTTCGTGGGGTTGTATTAGACCCAACCTCGATTTCTAAGAAATGTATTTGCAATTTCGATGCATTTAGGGGATGACAGAGCGTCCCACATAGTGTCTTTAGTATCCTTTTTTTTAAGTTGTTTAGCCTTTTTAAACGGTTAAGTAAGTTGACTCACGTGTAAATGAAGTGGCAGCTTTGGTTAATAGATTTTGGGCTGGTTTGGATTGGCTTATTTGAGCTTATCTACTATCATAAGTTTTGTAAGGTTGTTTGGGAGAAATTAAGAAACTAACACATGATATGTTCATAAGCTGTTTTCAACTTATTTTCGTTAGTTCTCCTATATAGCTTACGAAAACAACTTATAGGTTATATGAAAACAATTTAAGTTTATTTTATCATGTGCTATAGAAATAGCTTATGCATAAGTGCGTATCATAATAAGTGTTATAAGTTTTTATCCAAGCAGGGTCATATTAGGTGTAATGGCTTATGTACAATCTACTGAACTTTATCAACCACAGATTTAAACATGATTAACCTTGATTTTAAAATCTACATATCATTTGAATTTGAATTGCATAAAATCATGGTTAATTAAGTTCAATTGATGGATATTGTGTTATCAGATATTGATATATCTACTAACCACTCATTGAACTATGCTATTGCTAACCACATGCGGGACCGTGTTAACCATTCAAAAAGTTGTAGAATTTTCTTATCCAAATTGATGTTCAAATAGCATTTCTGTTCCGTAGATTATTGCAAAATCATTTATAGAATTTTCACTAACTCGTTCTACACGAGTTCATTTAAAATTTAAAATATGTGTATGATCATTCCTTTGAGACTTGTCACAGACAAAATTTTCATAACATTGCTCATAGAAATCAGAATCCTTCTATAATGTGGCAATGACCATTGTGTTTCAGATGAGTAGTTATTCCAAGACTCTTATCTAATTTACAATTTCTCTTAACAAGATGCAACTTTATCCTAAAATTGAATACGAGAAATGAATTGATGATCAATTTTCATTATTGTTTGCAGTGTTGGATATCGATTCTGTTGGCACATTCACTATGTGTCATGAAGCACTTAAGTATCTCAAGAAAGGGGCACCTGGTAGGAACTCTTCTAGCGGGGGATTAATAATAAACATTAGTGCTACCTTGCATTATGGAGCTTCTTGGTATCAAATTCATGTATCTGCAGCAAAGGTTTGTAACACAGTATACCTAGATGTTCATTTTCATCTTTTTAATTTAAGGATTTAAAGGTTATGCACTATCAGAATAAATCAGTTTTACACTGGCATCCAATGAAAATATATTATTTTGCCACATCACTCTACTCTCGTTAGATGCGAGTTTAAATTTGATTTATAGTGCATGCCTATTAAACTCTTACTTTTAACTCTAAATTTTAATTATTCAACAGGCAGCTGTTGATTCTACTACAAGAAACTTGGCACTGGAATGGGGAACAGATTATGATATTCGAGTCAATGGGATTGCACCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTGGCTCCTGAAGAAATAGGTAGCAGAGGCAGAGATGAAATGCCTCTGTATAAACTTGGGGAGAAATGGGATATTGCAATGGCTGCTCTCTTCTTAGCATCAGATGCAGGTTAGTAACTTTGTGCAGTTATCCAAGTGTTCCCTACTTGGTGTATGCGATACTGTAAATGTTGTATTTTTGTGGTGACTATCTGAAAGCCTTGGAAACATTTTCATAACTTCCTTCAAAGTCAATGAGAAGTAGTTAGATTTCTTGCATGATTAATTAGTAGTGTTCGGTTGGGACTTGCTGGTTTTTGAATTCCATGCTTGGGTTTTGCTTTGGTGACAGTCTAGCTTTCTGGTAGTGAAACTAGAAAGTATAGGTTCACAAGATATTATGTAATTATAGGGAAGTAGGCTCCTTTTATGCATTATTTGTTTTATGGTCCTTCCTACCCTTATACCACAAATATAAATTGTGGTGTCTTTAGACAAAATGTATCCATTTTGCATAATTTTGCAATACGTATTTAAACCTTGGCTTCTTTTCAGTTCTACCTTTCAATGCTTCTCTGCGTTAATTTTTCATGATTTTTTTGACATGTTGGTTTTAAATTGTTACAAAACATCAATATTTGATTTTAGAAACATTTTATATATATTATTTTTCGTGTAAAAAACACTTGTGTCTCTCTAATGTTATGTTTGTTTCTGTTCAAGGAATACTCGTGACCCTGATCGTATGTTTTATTTAAATTATAACTCTTCTATCTTTTTCAGTGTCGTCTTATTTTGTCTGATACTTTTCCCTTCTCATAGTTTATACATCTCACCTGGTCTGTAATCCTGCTATAGACTTTCAAATGCTTTTGCTTTATCATTACTTAATAATTTATCAATGTCTTTTTTACCCATATTGCAATACCCTTCATTCAACTAAGTCATGTCACTCCACATGTCATCAGCACTTCTTTAGATCTCTCAAAACCATCTCATGAAAACCTTTCTCTTAAAGAGCCTTTGTCGTGAAAACCTTTCTCTTATAGAGCCTTTGTCTTCCACTCTTTAATAGCTGCCACCATATTACTCGATGACGGTTAACTTGAGTATTCCTCTTTAATTGTCTCGACTCATGCATTCATCACAAATACTCTATTTTGGATTGTTAGACTCTCTTCTTGTTACACTTCATGCAATGTTTTTTATTCAATTTCCTCTCATGTATATGACCATTTAGATCACCTAGAAATAACCTTTTCACTTTACTGTCTTTGTTCGACAAAACCTTCTTAAAATTTTGTTAGAGCTTAATTCAATCTTACAAAACCGGCTGGTAAGGTGAAGGTTACCAAAACATTATAAACACTACATAGGCCATGTCTCTAGGCAGCATGAGACTAAATCCACCCCTTCACACCCAACACAATGAAGGCAACCCACTTGCTGCAATTAGGTGGCTAGGGGTATACTATATTGAAGGTTGAATTTCCAACACTTTTATATCTTCCCAAATCTTTACCTTTTTTTTTTTTTTTTTTTCCTACTCCCGTTGCAGTCTATATGTCCTGATACCAAACTTTGAAGCCTTATGTATTCTAGATTTATTAGTCTTTTGTAAACTTTCACATGTTGATAAAAACAACTTTTGCAAGGTGGTTCGTTAATGTTATTTTCATATCCTTATTTCATCATTGCTATCATATAATTATCATATTTGTTAGTCTTTGTTTTGAAATGTAGATTGTTAGTCTTTGTTTCTCTATCCCATTTTTACTCACTGAATACTAACCATGTAGTTGGTTTGAAATGGATGTCTTTGTAACCCTAGGTATCTCAAACAGTGACTATTTTATTCCTTTAATTTTTTATTTATTTGTCTATGGAAACTTAACATCGTTTAAATTTGTGAAGGAAAATACATTAACGGAGACACTATGATAGTTGATGGAGGACTTTGGCTGAGCCGGCCACGTTATTTGCCAAAGGAGGCAGTGAGACAGGTATCACGAGAAGTAGAAAAAAGATCCAGAAATGAACCAATTGGTGTTCCAAAAAGCAAGCTATGA

Protein sequence

>MS.gene035412.t1

MVASTESPFKPEILKGKVALITGGASGIGFEISTQLGKHGASVAVMGRRKQVLQSAVSVLQSLSIPAVGFEGDVRKQEDAARVVDLTFKHFGRIDILVNAAAGNFLAAAEDLSPNGCNGLLLDIDSVGTFTMCHEALKYLKKGAPGRNSSSGGLIINISATLHYGASWYQIHVSAAKAAVDSTTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPEEIGSRGRDEMPLYKLGEKWDIAMAALFLASDAGKYINGDTMIVDGGLWLSRPRYLPKEAVRQVSREVEKRSRNEPIGVPKSKL