Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035683.t1 | XP_003610174.2 | 95.9 | 414 | 14 | 2 | 1 | 414 | 1 | 411 | 1.60E-229 | 805.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035683.t1 | Q08448 | 25.8 | 244 | 131 | 8 | 77 | 310 | 6 | 209 | 1.1e-13 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035683.t1 | A0A396IIT9 | 95.9 | 414 | 14 | 2 | 1 | 414 | 1 | 411 | 1.1e-229 | 805.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69080 | MS.gene035683 | PPI |
| MS.gene40236 | MS.gene035683 | PPI |
| MS.gene23920 | MS.gene035683 | PPI |
| MS.gene035683 | MS.gene014590 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035683.t1 | MTR_4g128800 | 95.687 | 371 | 13 | 2 | 44 | 414 | 1 | 368 | 0.0 | 738 |
| MS.gene035683.t1 | MTR_4g128800 | 92.077 | 366 | 24 | 3 | 44 | 407 | 1 | 363 | 0.0 | 695 |
| MS.gene035683.t1 | MTR_4g128800 | 95.636 | 275 | 9 | 2 | 44 | 318 | 1 | 272 | 0.0 | 545 |
| MS.gene035683.t1 | MTR_3g110530 | 53.525 | 383 | 159 | 7 | 41 | 412 | 23 | 397 | 6.43e-140 | 405 |
| MS.gene035683.t1 | MTR_1g040460 | 53.709 | 337 | 142 | 3 | 77 | 413 | 31 | 353 | 6.03e-120 | 353 |
| MS.gene035683.t1 | MTR_8g086260 | 45.531 | 358 | 168 | 6 | 75 | 412 | 88 | 438 | 2.68e-95 | 293 |
| MS.gene035683.t1 | MTR_8g086260 | 45.858 | 338 | 156 | 6 | 75 | 392 | 88 | 418 | 9.56e-89 | 276 |
| MS.gene035683.t1 | MTR_2g015960 | 44.675 | 338 | 169 | 5 | 75 | 399 | 82 | 414 | 6.44e-87 | 271 |
| MS.gene035683.t1 | MTR_8g086260 | 50.397 | 252 | 115 | 2 | 75 | 323 | 88 | 332 | 1.96e-82 | 256 |
| MS.gene035683.t1 | MTR_8g086260 | 49.242 | 264 | 124 | 2 | 75 | 335 | 88 | 344 | 3.54e-81 | 255 |
| MS.gene035683.t1 | MTR_2g015960 | 49.587 | 242 | 117 | 2 | 75 | 316 | 21 | 257 | 4.88e-76 | 238 |
| MS.gene035683.t1 | MTR_2g015960 | 50.206 | 243 | 114 | 3 | 75 | 316 | 82 | 318 | 5.05e-75 | 237 |
| MS.gene035683.t1 | MTR_8g086260 | 48.276 | 232 | 110 | 2 | 75 | 303 | 88 | 312 | 4.43e-70 | 224 |
| MS.gene035683.t1 | MTR_8g086260 | 48.276 | 232 | 110 | 2 | 75 | 303 | 88 | 312 | 6.87e-70 | 223 |
| MS.gene035683.t1 | MTR_6g005650 | 54.023 | 87 | 37 | 2 | 145 | 231 | 211 | 294 | 4.56e-22 | 95.9 |
| MS.gene035683.t1 | MTR_7g405800 | 51.724 | 87 | 39 | 2 | 145 | 231 | 144 | 227 | 5.81e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035683.t1 | AT4G25770 | 68.437 | 339 | 93 | 3 | 75 | 412 | 91 | 416 | 4.74e-165 | 470 |
| MS.gene035683.t1 | AT4G25770 | 64.095 | 337 | 107 | 3 | 75 | 410 | 91 | 414 | 2.02e-149 | 430 |
| MS.gene035683.t1 | AT1G10040 | 56.891 | 341 | 135 | 5 | 75 | 412 | 79 | 410 | 4.60e-129 | 378 |
| MS.gene035683.t1 | AT5G51180 | 54.286 | 350 | 136 | 6 | 64 | 412 | 29 | 355 | 6.06e-120 | 353 |
| MS.gene035683.t1 | AT5G51180 | 54.286 | 350 | 136 | 6 | 64 | 412 | 29 | 355 | 6.06e-120 | 353 |
| MS.gene035683.t1 | AT1G10040 | 56.075 | 321 | 129 | 5 | 75 | 392 | 79 | 390 | 3.62e-118 | 350 |
| MS.gene035683.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 93 | 441 | 1.13e-90 | 281 |
| MS.gene035683.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 93 | 441 | 1.13e-90 | 281 |
| MS.gene035683.t1 | AT1G29120 | 43.526 | 363 | 174 | 6 | 66 | 411 | 94 | 442 | 1.20e-90 | 281 |
| MS.gene035683.t1 | AT1G29120 | 43.132 | 364 | 175 | 7 | 66 | 411 | 93 | 442 | 1.43e-87 | 273 |
| MS.gene035683.t1 | AT1G29120 | 43.714 | 350 | 166 | 6 | 66 | 398 | 93 | 428 | 1.29e-86 | 270 |
| MS.gene035683.t1 | AT1G29120 | 48.148 | 270 | 126 | 5 | 66 | 335 | 93 | 348 | 1.01e-78 | 249 |
| MS.gene035683.t1 | AT1G29120 | 48.148 | 270 | 126 | 5 | 66 | 335 | 93 | 348 | 1.32e-78 | 248 |
| MS.gene035683.t1 | AT1G29120 | 46.639 | 238 | 114 | 4 | 66 | 303 | 93 | 317 | 1.98e-67 | 217 |
Find 89 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGAATGAATTCGTTTC+TGG | 0.111088 | 8.1:-4248690 | None:intergenic |
| AACTTCAGCTTCTAATGTTT+TGG | 0.246306 | 8.1:+4247150 | None:intergenic |
| TGGCTCTAAACCAGCGATTC+TGG | 0.256377 | 8.1:+4247057 | None:intergenic |
| CACCTTGTCATCATGGTTAA+TGG | 0.263443 | 8.1:-4248455 | MS.gene035683:CDS |
| TCTTCAAAATTGACATTTGA+TGG | 0.269567 | 8.1:-4247468 | MS.gene035683:CDS |
| GCACTATTATCATCTACTTT+GGG | 0.275400 | 8.1:+4248503 | None:intergenic |
| AATGAATTCGTTTCTGGTTT+GGG | 0.288219 | 8.1:-4248684 | MS.gene035683:CDS |
| AAATTTCATCGTCGACGATT+TGG | 0.305836 | 8.1:-4248551 | MS.gene035683:CDS |
| GAATGAATTCGTTTCTGGTT+TGG | 0.313753 | 8.1:-4248685 | MS.gene035683:CDS |
| CGGTGGACGATGACTTTATC+TGG | 0.317743 | 8.1:+4248275 | None:intergenic |
| GGCACATTCTTTGGGAGGCT+TGG | 0.330760 | 8.1:-4247209 | MS.gene035683:CDS |
| CAAACTGCACATTTAATTGT+AGG | 0.343395 | 8.1:-4245929 | MS.gene035683:CDS |
| AACGTTAATAGATGCTTTGT+TGG | 0.344806 | 8.1:+4245108 | None:intergenic |
| CCATCATCATCATTATTATT+CGG | 0.347160 | 8.1:-4248608 | MS.gene035683:CDS |
| AGCACTATTATCATCTACTT+TGG | 0.350456 | 8.1:+4248502 | None:intergenic |
| TTTGAGATGCTCTTCTTTCA+AGG | 0.353953 | 8.1:+4245948 | None:intergenic |
| TTGTAGCTTCCATTTCTTTG+TGG | 0.358068 | 8.1:-4245980 | MS.gene035683:intron |
| GGGGTCTCACTCAGGTTCAT+TGG | 0.376799 | 8.1:-4244559 | MS.gene035683:CDS |
| TCTATTGTCAGACGCTGGCC+TGG | 0.397053 | 8.1:-4247253 | MS.gene035683:CDS |
| CATTTAATTGTAGGGAGAAC+TGG | 0.400593 | 8.1:-4245920 | MS.gene035683:CDS |
| AGTTCTGCTGATTGGAGATA+TGG | 0.411605 | 8.1:-4248323 | MS.gene035683:CDS |
| GAATTTCCAGTTCTGCTGAT+TGG | 0.420904 | 8.1:-4248331 | MS.gene035683:intron |
| TCCTCCTCACCTTGTCATCA+TGG | 0.426931 | 8.1:-4248462 | MS.gene035683:CDS |
| ACATTCTTTGGGAGGCTTGG+TGG | 0.430561 | 8.1:-4247206 | MS.gene035683:CDS |
| AAAGGAATGCCACAAAGAAA+TGG | 0.436032 | 8.1:+4245971 | None:intergenic |
| GCAAAGGTTATAAAGTTCAT+TGG | 0.449119 | 8.1:+4247037 | None:intergenic |
| CTATTGTCAGACGCTGGCCT+GGG | 0.450168 | 8.1:-4247252 | MS.gene035683:CDS |
| ACCTTTGCCACGCCACATCT+TGG | 0.454432 | 8.1:-4247022 | MS.gene035683:CDS |
| GATGACAAGGTGAGGAGGAA+TGG | 0.454449 | 8.1:+4248466 | None:intergenic |
| TGGTTAATGGCATTGTTGGC+AGG | 0.459526 | 8.1:-4248442 | MS.gene035683:intron |
| GGGTCTCACTCAGGTTCATT+GGG | 0.459640 | 8.1:-4244558 | MS.gene035683:CDS |
| TTCCTCACGGACAACGATGA+TGG | 0.467217 | 8.1:-4245887 | MS.gene035683:CDS |
| CATCAGAATCCTCAATCATT+CGG | 0.469799 | 8.1:+4245846 | None:intergenic |
| ATGACAAGGTGAGGAGGAAT+GGG | 0.470142 | 8.1:+4248467 | None:intergenic |
| TCTTCTCCTCCGAATGATTG+AGG | 0.484935 | 8.1:-4245855 | MS.gene035683:CDS |
| GATGCTCTTCTTTCAAGGAA+AGG | 0.488436 | 8.1:+4245953 | None:intergenic |
| TTTCATCGTCGACGATTTGG+TGG | 0.490107 | 8.1:-4248548 | MS.gene035683:CDS |
| CATTATGAAGCCAGAATCGC+TGG | 0.492987 | 8.1:-4247067 | MS.gene035683:CDS |
| GAAAACCTACTGGTTGCATT+CGG | 0.496407 | 8.1:-4244281 | MS.gene035683:CDS |
| TTTGCAGTCACAATTTCTGC+AGG | 0.496865 | 8.1:+4247126 | None:intergenic |
| AAAGAGATCTTCTGCAACCC+AGG | 0.497559 | 8.1:+4247235 | None:intergenic |
| ATCATGGTTAATGGCATTGT+TGG | 0.501862 | 8.1:-4248446 | MS.gene035683:CDS |
| GATGGAGCACCTCATCAATT+CGG | 0.503206 | 8.1:-4245307 | MS.gene035683:CDS |
| AAACTGCACATTTAATTGTA+GGG | 0.504974 | 8.1:-4245928 | MS.gene035683:CDS |
| CCGAATAATAATGATGATGA+TGG | 0.510234 | 8.1:+4248608 | None:intergenic |
| CACTATTATCATCTACTTTG+GGG | 0.522847 | 8.1:+4248504 | None:intergenic |
| ACTTGTGTTGAAGATATGGT+TGG | 0.526168 | 8.1:-4245329 | MS.gene035683:intron |
| AATCTCAGGTGAAAACCTAC+TGG | 0.526558 | 8.1:-4244291 | MS.gene035683:intron |
| TTCAGCTAGCCTCTCACCCA+TGG | 0.528417 | 8.1:+4247437 | None:intergenic |
| ACCAAGATGTGGCGTGGCAA+AGG | 0.535141 | 8.1:+4247021 | None:intergenic |
| CACATTGTACACACTGAAGG+TGG | 0.538544 | 8.1:-4245148 | MS.gene035683:CDS |
| ACCTACTGGTTGCATTCGGA+TGG | 0.540251 | 8.1:-4244277 | MS.gene035683:CDS |
| GATGATAAGGGGTCTCACTC+AGG | 0.541264 | 8.1:-4244567 | MS.gene035683:CDS |
| TTTGTGGCACATTCTTTGGG+AGG | 0.547005 | 8.1:-4247214 | MS.gene035683:CDS |
| AACAAAGCATCTATTAACGT+TGG | 0.554028 | 8.1:-4245106 | MS.gene035683:CDS |
| TACTGCTCACAGTACAATCC+AGG | 0.559859 | 8.1:-4244495 | MS.gene035683:intron |
| GGGTGAGAGGCTAGCTGAAG+AGG | 0.561017 | 8.1:-4247433 | MS.gene035683:intron |
| TCAGGTTCATTGGGAGCGTG+TGG | 0.573997 | 8.1:-4244549 | MS.gene035683:CDS |
| AAAGCATCTATTAACGTTGG+AGG | 0.575697 | 8.1:-4245103 | MS.gene035683:CDS |
| TGGTTCAAGAGGACATAGAC+AGG | 0.585186 | 8.1:-4247002 | MS.gene035683:intron |
| TCAATCATTCGGAGGAGAAG+AGG | 0.590800 | 8.1:+4245857 | None:intergenic |
| CAGAAATTGTGACTGCAAAG+AGG | 0.591218 | 8.1:-4247122 | MS.gene035683:CDS |
| TTTGTAGAGGAGATGATAAG+GGG | 0.598296 | 8.1:-4244578 | MS.gene035683:intron |
| ACGCCACATCTTGGTTCAAG+AGG | 0.608089 | 8.1:-4247013 | MS.gene035683:CDS |
| TTCCATCATCGTTGTCCGTG+AGG | 0.608229 | 8.1:+4245885 | None:intergenic |
| ATTTGATGGTGTTGATACCA+TGG | 0.609716 | 8.1:-4247454 | MS.gene035683:CDS |
| GTGCGGAGCAGTTTCTCAAG+AGG | 0.613223 | 8.1:-4248301 | MS.gene035683:CDS |
| TACTATCTATTGTCAGACGC+TGG | 0.614523 | 8.1:-4247258 | MS.gene035683:CDS |
| ACATTGCCGGAGACTAGATA+AGG | 0.614588 | 8.1:+4244221 | None:intergenic |
| GCGTCAACATGAACTTCCAA+AGG | 0.625059 | 8.1:-4245285 | MS.gene035683:intron |
| CCTTCAGTGTGTACAATGTG+TGG | 0.626797 | 8.1:+4245151 | None:intergenic |
| ACCATGATGACAAGGTGAGG+AGG | 0.632986 | 8.1:+4248461 | None:intergenic |
| GTGTTGAAGATATGGTTGGA+TGG | 0.633558 | 8.1:-4245325 | MS.gene035683:intron |
| CCACACATTGTACACACTGA+AGG | 0.635968 | 8.1:-4245151 | MS.gene035683:CDS |
| ATCATTCGGAGGAGAAGAGG+AGG | 0.636999 | 8.1:+4245860 | None:intergenic |
| TTTGATGGTGTTGATACCAT+GGG | 0.642006 | 8.1:-4247453 | MS.gene035683:CDS |
| ACATTGTACACACTGAAGGT+GGG | 0.643420 | 8.1:-4245147 | MS.gene035683:CDS |
| ATGTTGACGCCGAATTGATG+AGG | 0.645392 | 8.1:+4245298 | None:intergenic |
| TGTCCTCTTGAACCAAGATG+TGG | 0.649026 | 8.1:+4247010 | None:intergenic |
| TGCCATTAACCATGATGACA+AGG | 0.651118 | 8.1:+4248453 | None:intergenic |
| TCTTGAACCAAGATGTGGCG+TGG | 0.654051 | 8.1:+4247015 | None:intergenic |
| ATAATGATGATGATGGCGTA+AGG | 0.658967 | 8.1:+4248615 | None:intergenic |
| CAGAATCCTCAATCATTCGG+AGG | 0.663768 | 8.1:+4245849 | None:intergenic |
| CTTCAGTGTGTACAATGTGT+GGG | 0.669488 | 8.1:+4245152 | None:intergenic |
| TTAACCATGATGACAAGGTG+AGG | 0.670354 | 8.1:+4248458 | None:intergenic |
| TGCTGATTGGAGATATGGTG+CGG | 0.674450 | 8.1:-4248318 | MS.gene035683:CDS |
| GTGTTGATACCATGGGTGAG+AGG | 0.674872 | 8.1:-4247446 | MS.gene035683:CDS |
| ACCATCCGAATGCAACCAGT+AGG | 0.686623 | 8.1:+4244276 | None:intergenic |
| GCTTTCAGAAGAGTAAACAG+CGG | 0.740467 | 8.1:-4244520 | MS.gene035683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATATATATAAAGTAT+AGG | - | chr8.1:4248074-4248093 | MS.gene035683:intron | 10.0% |
| !!! | AATTTCTAAAATAAATCTTT+GGG | + | chr8.1:4246625-4246644 | None:intergenic | 10.0% |
| !! | ATAACTATTATTAGTTAATC+CGG | - | chr8.1:4244993-4245012 | MS.gene035683:intron | 15.0% |
| !! | CATTAACAATTTAATTGAAT+TGG | + | chr8.1:4247166-4247185 | None:intergenic | 15.0% |
| !! | TAAATAATCAAAATACACAT+AGG | + | chr8.1:4246837-4246856 | None:intergenic | 15.0% |
| !! | TTTAGAAACATATTATATGA+AGG | + | chr8.1:4248153-4248172 | None:intergenic | 15.0% |
| !!! | ACTTTTTCATTTTATTAAAG+GGG | - | chr8.1:4246678-4246697 | MS.gene035683:intron | 15.0% |
| !!! | ATTTGAAATTATACAAACAA+CGG | - | chr8.1:4246716-4246735 | MS.gene035683:intron | 15.0% |
| !!! | CAATTTCTAAAATAAATCTT+TGG | + | chr8.1:4246626-4246645 | None:intergenic | 15.0% |
| !!! | CACTTTTTCATTTTATTAAA+GGG | - | chr8.1:4246677-4246696 | MS.gene035683:intron | 15.0% |
| !!! | GTAATTTTAATGATATATTG+TGG | - | chr8.1:4245408-4245427 | MS.gene035683:intron | 15.0% |
| !!! | TCACTTTTTCATTTTATTAA+AGG | - | chr8.1:4246676-4246695 | MS.gene035683:intron | 15.0% |
| !! | AACAGACAAATAAAATATCA+CGG | + | chr8.1:4248603-4248622 | None:intergenic | 20.0% |
| !! | AACTTAATTCATGTTTATCT+AGG | - | chr8.1:4245636-4245655 | MS.gene035683:intron | 20.0% |
| !! | AAGTGTAAACAATATTATTG+TGG | - | chr8.1:4245223-4245242 | MS.gene035683:intron | 20.0% |
| !! | AATGTGAATGAATTATCATA+AGG | + | chr8.1:4245600-4245619 | None:intergenic | 20.0% |
| !! | ATATTGAAATTGTCTTAACT+GGG | - | chr8.1:4247406-4247425 | MS.gene035683:intron | 20.0% |
| !! | GTTGTTTGTATAATTTCAAA+TGG | + | chr8.1:4246717-4246736 | None:intergenic | 20.0% |
| !! | TACATCATTGTAACAATATA+TGG | + | chr8.1:4247519-4247538 | None:intergenic | 20.0% |
| !! | TATAACAAACTTAAATGACT+CGG | + | chr8.1:4247120-4247139 | None:intergenic | 20.0% |
| !! | TATAAGATAAAAACTTTACC+TGG | + | chr8.1:4248443-4248462 | None:intergenic | 20.0% |
| !!! | AATATCTTACATAGACTTTT+CGG | - | chr8.1:4246650-4246669 | MS.gene035683:intron | 20.0% |
| !!! | ACATGAATTAAGTTTAAAAC+TGG | + | chr8.1:4245630-4245649 | None:intergenic | 20.0% |
| !!! | ATTGTGGATTTTCATATAAA+TGG | - | chr8.1:4245239-4245258 | MS.gene035683:intron | 20.0% |
| !!! | TAAAACATTTTACTTCAAGT+TGG | + | chr8.1:4246110-4246129 | None:intergenic | 20.0% |
| ! | AAACTGCACATTTAATTGTA+GGG | - | chr8.1:4246989-4247008 | MS.gene035683:intron | 25.0% |
| ! | AAGACATCTAATTTGAAAAG+AGG | + | chr8.1:4247258-4247277 | None:intergenic | 25.0% |
| ! | AATTACTAATCTTCAGTTGA+TGG | + | chr8.1:4246425-4246444 | None:intergenic | 25.0% |
| ! | ACTAATAACACAAATCTCTA+AGG | + | chr8.1:4246226-4246245 | None:intergenic | 25.0% |
| ! | AGAGAAAACCATAAATCATA+GGG | - | chr8.1:4246252-4246271 | MS.gene035683:intron | 25.0% |
| ! | ATATTATATGAAGGTCCAAA+CGG | + | chr8.1:4248144-4248163 | None:intergenic | 25.0% |
| ! | CAAAATCATCTGTCAAATTA+TGG | + | chr8.1:4245167-4245186 | None:intergenic | 25.0% |
| ! | CCATCATCATCATTATTATT+CGG | - | chr8.1:4244309-4244328 | MS.gene035683:intron | 25.0% |
| ! | CTTTGTATGTATCTAATTGT+TGG | - | chr8.1:4245067-4245086 | MS.gene035683:intron | 25.0% |
| ! | GATATTGAAATTGTCTTAAC+TGG | - | chr8.1:4247405-4247424 | MS.gene035683:intron | 25.0% |
| ! | GTCAAATTATGGTATAACAA+GGG | + | chr8.1:4245156-4245175 | None:intergenic | 25.0% |
| ! | TAAATTGTTAATGATTGTGC+AGG | - | chr8.1:4247173-4247192 | MS.gene035683:CDS | 25.0% |
| ! | TATTGAAATTGTCTTAACTG+GGG | - | chr8.1:4247407-4247426 | MS.gene035683:intron | 25.0% |
| ! | TCTTCAAAATTGACATTTGA+TGG | - | chr8.1:4245449-4245468 | MS.gene035683:intron | 25.0% |
| ! | TGTCAAATTATGGTATAACA+AGG | + | chr8.1:4245157-4245176 | None:intergenic | 25.0% |
| ! | TTTAATGATATATTGTGGAC+AGG | - | chr8.1:4245413-4245432 | MS.gene035683:intron | 25.0% |
| ! | TTTAATTCATTGAGATGTCA+CGG | - | chr8.1:4244744-4244763 | MS.gene035683:intron | 25.0% |
| ! | TTTGACAACGAAAACAATTT+AGG | + | chr8.1:4246498-4246517 | None:intergenic | 25.0% |
| !! | ACTAATTCATCATGTTTTGT+GGG | + | chr8.1:4244877-4244896 | None:intergenic | 25.0% |
| !! | ACTTTTGCATATATGGATTT+AGG | - | chr8.1:4244970-4244989 | MS.gene035683:intron | 25.0% |
| !! | AGATTTGTGTTATTAGTATG+AGG | - | chr8.1:4246229-4246248 | MS.gene035683:intron | 25.0% |
| !! | ATTTATGCTCCTTAATTTTC+CGG | - | chr8.1:4246911-4246930 | MS.gene035683:intron | 25.0% |
| !! | CCAAAGTAATTTAAAGTTCA+GGG | + | chr8.1:4245553-4245572 | None:intergenic | 25.0% |
| !! | CTCAATCTTAATGTTTTACA+TGG | - | chr8.1:4247674-4247693 | MS.gene035683:intron | 25.0% |
| !! | GTTTTTATCTTATAGCTTTC+CGG | - | chr8.1:4248449-4248468 | MS.gene035683:CDS | 25.0% |
| !! | TCCAAAGTAATTTAAAGTTC+AGG | + | chr8.1:4245554-4245573 | None:intergenic | 25.0% |
| !! | TGATAATGATATAGTGTCAA+TGG | - | chr8.1:4247317-4247336 | MS.gene035683:intron | 25.0% |
| !! | TTGAAAATAGCTTCTCATTT+TGG | - | chr8.1:4245269-4245288 | MS.gene035683:intron | 25.0% |
| !!! | AGACAGTTTTTATTTCTTAC+AGG | + | chr8.1:4247874-4247893 | None:intergenic | 25.0% |
| !!! | ATATTAAGTGGTTTTTGAGA+AGG | + | chr8.1:4246378-4246397 | None:intergenic | 25.0% |
| !!! | GATACTTTTTTGTAGAGAAA+AGG | - | chr8.1:4248260-4248279 | MS.gene035683:intron | 25.0% |
| !!! | TATTTAATTTGTAGCAGCTT+GGG | - | chr8.1:4246851-4246870 | MS.gene035683:intron | 25.0% |
| !!! | TTATTTAATTTGTAGCAGCT+TGG | - | chr8.1:4246850-4246869 | MS.gene035683:intron | 25.0% |
| AAAAAACTCGTGAATTGACT+TGG | - | chr8.1:4245096-4245115 | MS.gene035683:CDS | 30.0% | |
| AACCTACAACTAAATGCATT+TGG | - | chr8.1:4244564-4244583 | MS.gene035683:CDS | 30.0% | |
| AACGTTAATAGATGCTTTGT+TGG | + | chr8.1:4247812-4247831 | None:intergenic | 30.0% | |
| AAGAAAATAATTAGCTCGTG+TGG | + | chr8.1:4247492-4247511 | None:intergenic | 30.0% | |
| AAGTCAACAATTGATGTACA+CGG | + | chr8.1:4245348-4245367 | None:intergenic | 30.0% | |
| AGCAAAGTAAAAAAGAGGAA+AGG | + | chr8.1:4248107-4248126 | None:intergenic | 30.0% | |
| AGCACTATTATCATCTACTT+TGG | + | chr8.1:4244418-4244437 | None:intergenic | 30.0% | |
| AGCTTAAAATTGCATACAAG+AGG | - | chr8.1:4246146-4246165 | MS.gene035683:intron | 30.0% | |
| AGTGTGAATAAAGTAATGAG+AGG | + | chr8.1:4244687-4244706 | None:intergenic | 30.0% | |
| ATAAAGTAATGAGAGGAAGA+AGG | + | chr8.1:4244680-4244699 | None:intergenic | 30.0% | |
| ATGGATCATGTCATATTAAG+TGG | + | chr8.1:4246390-4246409 | None:intergenic | 30.0% | |
| ATTAGACTAGCAGAAAAGAA+AGG | + | chr8.1:4247722-4247741 | None:intergenic | 30.0% | |
| ATTTGTCTGTTGTTAATCTC+AGG | - | chr8.1:4248612-4248631 | MS.gene035683:CDS | 30.0% | |
| CAAACTGCACATTTAATTGT+AGG | - | chr8.1:4246988-4247007 | MS.gene035683:intron | 30.0% | |
| CAAATACCAGAGACAAAAAA+AGG | + | chr8.1:4247912-4247931 | None:intergenic | 30.0% | |
| CAAATTGTACTGAAGCTTAA+TGG | - | chr8.1:4247293-4247312 | MS.gene035683:intron | 30.0% | |
| CAAGAAGTTTACTTAAGATG+AGG | - | chr8.1:4247947-4247966 | MS.gene035683:intron | 30.0% | |
| CACTATTATCATCTACTTTG+GGG | + | chr8.1:4244416-4244435 | None:intergenic | 30.0% | |
| CCCTGAACTTTAAATTACTT+TGG | - | chr8.1:4245550-4245569 | MS.gene035683:intron | 30.0% | |
| GAGAGAAAACCATAAATCAT+AGG | - | chr8.1:4246251-4246270 | MS.gene035683:intron | 30.0% | |
| GCAAAGGTTATAAAGTTCAT+TGG | + | chr8.1:4245883-4245902 | None:intergenic | 30.0% | |
| GCACTATTATCATCTACTTT+GGG | + | chr8.1:4244417-4244436 | None:intergenic | 30.0% | |
| GTATCAAAGTTTAATTGCGA+AGG | + | chr8.1:4246317-4246336 | None:intergenic | 30.0% | |
| TCTTCATGTTTATAACCGTT+TGG | - | chr8.1:4248126-4248145 | MS.gene035683:intron | 30.0% | |
| TGAAGAGCAAAGTAAAAAAG+AGG | + | chr8.1:4248112-4248131 | None:intergenic | 30.0% | |
| TGATTACATTATGAGAGTGA+AGG | + | chr8.1:4244510-4244529 | None:intergenic | 30.0% | |
| TGGTATTTGTGAAAGAAGTA+TGG | - | chr8.1:4247923-4247942 | MS.gene035683:intron | 30.0% | |
| TTATTGATGCTCAAGTATGA+AGG | - | chr8.1:4245021-4245040 | MS.gene035683:intron | 30.0% | |
| TTCCAAATGCATTTAGTTGT+AGG | + | chr8.1:4244569-4244588 | None:intergenic | 30.0% | |
| ! | AACAAAGCATCTATTAACGT+TGG | - | chr8.1:4247811-4247830 | MS.gene035683:intron | 30.0% |
| ! | AACTTCAGCTTCTAATGTTT+TGG | + | chr8.1:4245770-4245789 | None:intergenic | 30.0% |
| ! | ACAAATCTCTAAGGAAACAA+GGG | + | chr8.1:4246217-4246236 | None:intergenic | 30.0% |
| ! | ATAGTATCAACAAGTTTTGC+CGG | + | chr8.1:4248471-4248490 | None:intergenic | 30.0% |
| ! | ATTTTGCCAGATATCTTCAT+AGG | - | chr8.1:4246521-4246540 | MS.gene035683:intron | 30.0% |
| ! | CCGAATAATAATGATGATGA+TGG | + | chr8.1:4244312-4244331 | None:intergenic | 30.0% |
| ! | GACTAATTCATCATGTTTTG+TGG | + | chr8.1:4244878-4244897 | None:intergenic | 30.0% |
| ! | GAGCTAAACTTTTGCATATA+TGG | - | chr8.1:4244963-4244982 | MS.gene035683:intron | 30.0% |
| ! | TAAGGAGCATAAATAAGAGA+CGG | + | chr8.1:4246905-4246924 | None:intergenic | 30.0% |
| ! | TAGTTGCAATTTGATCCTTT+TGG | - | chr8.1:4245515-4245534 | MS.gene035683:intron | 30.0% |
| ! | TTTGGAGTAATCAAAAAGTC+TGG | + | chr8.1:4245752-4245771 | None:intergenic | 30.0% |
| ! | TTTGTTGTACGAGCTAAAAA+TGG | - | chr8.1:4246751-4246770 | MS.gene035683:intron | 30.0% |
| ! | TTTTGTAGAGGAGATGATAA+GGG | - | chr8.1:4248338-4248357 | MS.gene035683:intron | 30.0% |
| ! | TTTTTGTAGAGGAGATGATA+AGG | - | chr8.1:4248337-4248356 | MS.gene035683:intron | 30.0% |
| !! | AAGACATATGCTTTTTGTAG+AGG | - | chr8.1:4248326-4248345 | MS.gene035683:intron | 30.0% |
| !! | ATTTAATTTGTAGCAGCTTG+GGG | - | chr8.1:4246852-4246871 | MS.gene035683:intron | 30.0% |
| !!! | AACCTTCCATGTCAATTTTT+TGG | + | chr8.1:4247840-4247859 | None:intergenic | 30.0% |
| !!! | TCAGGTTTTATTTTGCTTTC+AGG | - | chr8.1:4247981-4248000 | MS.gene035683:intron | 30.0% |
| !!! | TGTAAACCTTTTTTTGTCTC+TGG | - | chr8.1:4247903-4247922 | MS.gene035683:intron | 30.0% |
| AAAACCATAAATCATAGGGC+TGG | - | chr8.1:4246256-4246275 | MS.gene035683:intron | 35.0% | |
| AAAGGAATGCCACAAAGAAA+TGG | + | chr8.1:4246949-4246968 | None:intergenic | 35.0% | |
| AAATTTCATCGTCGACGATT+TGG | - | chr8.1:4244366-4244385 | MS.gene035683:intron | 35.0% | |
| AAGAAAAAATAGCAGATGCC+AGG | + | chr8.1:4246019-4246038 | None:intergenic | 35.0% | |
| ACTTGTGTTGAAGATATGGT+TGG | - | chr8.1:4247588-4247607 | MS.gene035683:intron | 35.0% | |
| ATCATGGTTAATGGCATTGT+TGG | - | chr8.1:4244471-4244490 | MS.gene035683:intron | 35.0% | |
| CAAATATAAGTGACAGTCAC+AGG | - | chr8.1:4245305-4245324 | MS.gene035683:CDS | 35.0% | |
| CATCAGAAAGTCTTTACCTT+TGG | + | chr8.1:4247651-4247670 | None:intergenic | 35.0% | |
| CATCAGAATCCTCAATCATT+CGG | + | chr8.1:4247074-4247093 | None:intergenic | 35.0% | |
| CATTTAATTGTAGGGAGAAC+TGG | - | chr8.1:4246997-4247016 | MS.gene035683:intron | 35.0% | |
| CTACAAGAACCGGAAAATTA+AGG | + | chr8.1:4246923-4246942 | None:intergenic | 35.0% | |
| GTGTATTATGAAGTGCATCT+CGG | - | chr8.1:4247372-4247391 | MS.gene035683:intron | 35.0% | |
| TCCATCATAGTCAAGCTATT+GGG | - | chr8.1:4246803-4246822 | MS.gene035683:intron | 35.0% | |
| TTCCATCATAGTCAAGCTAT+TGG | - | chr8.1:4246802-4246821 | MS.gene035683:intron | 35.0% | |
| TTGAGCATCAATAAACTGAC+CGG | + | chr8.1:4245015-4245034 | None:intergenic | 35.0% | |
| TTGATACGAAAGTTACAGAC+CGG | - | chr8.1:4246330-4246349 | MS.gene035683:intron | 35.0% | |
| TTGTAGCTTCCATTTCTTTG+TGG | - | chr8.1:4246937-4246956 | MS.gene035683:intron | 35.0% | |
| TTTGTAGAGGAGATGATAAG+GGG | - | chr8.1:4248339-4248358 | MS.gene035683:intron | 35.0% | |
| ! | AAAGCATCTATTAACGTTGG+AGG | - | chr8.1:4247814-4247833 | MS.gene035683:intron | 35.0% |
| ! | AGGATAGTCGTGCATATTTT+TGG | - | chr8.1:4248001-4248020 | MS.gene035683:intron | 35.0% |
| ! | ATGTTTTGTGGGACCTAAAT+AGG | + | chr8.1:4244866-4244885 | None:intergenic | 35.0% |
| ! | CACAAATCTCTAAGGAAACA+AGG | + | chr8.1:4246218-4246237 | None:intergenic | 35.0% |
| ! | GATGAGGAAATTTTCATCTC+AGG | - | chr8.1:4247963-4247982 | MS.gene035683:intron | 35.0% |
| ! | TCTTTTGTGGCACATTCTTT+GGG | - | chr8.1:4245700-4245719 | MS.gene035683:CDS | 35.0% |
| ! | TGGTAAACATCTTTTCCTCA+CGG | - | chr8.1:4247017-4247036 | MS.gene035683:CDS | 35.0% |
| ! | TTTGAGATGCTCTTCTTTCA+AGG | + | chr8.1:4246972-4246991 | None:intergenic | 35.0% |
| ! | TTTTCCAGCCCTATGATTTA+TGG | + | chr8.1:4246263-4246282 | None:intergenic | 35.0% |
| !! | AAATCCAGCTCTAGATGAAA+GGG | - | chr8.1:4248506-4248525 | MS.gene035683:CDS | 35.0% |
| !! | ATAATGATGATGATGGCGTA+AGG | + | chr8.1:4244305-4244324 | None:intergenic | 35.0% |
| !! | ATTTGATGGTGTTGATACCA+TGG | - | chr8.1:4245463-4245482 | MS.gene035683:intron | 35.0% |
| !! | CTTGACTTGTGTTGAAGATA+TGG | - | chr8.1:4247584-4247603 | MS.gene035683:intron | 35.0% |
| !! | TAAATCCAGCTCTAGATGAA+AGG | - | chr8.1:4248505-4248524 | MS.gene035683:CDS | 35.0% |
| !! | TAATCTTCAGTTGATGGTTC+TGG | + | chr8.1:4246419-4246438 | None:intergenic | 35.0% |
| !! | TAGCTTCTCATTTTGGTGAA+CGG | - | chr8.1:4245276-4245295 | MS.gene035683:intron | 35.0% |
| !! | TTGATGGTTCTGGAATCATA+TGG | + | chr8.1:4246409-4246428 | None:intergenic | 35.0% |
| !! | TTTGATGGTGTTGATACCAT+GGG | - | chr8.1:4245464-4245483 | MS.gene035683:intron | 35.0% |
| !!! | TAGTCGTGCATATTTTTGGT+AGG | - | chr8.1:4248005-4248024 | MS.gene035683:intron | 35.0% |
| AATCTCAGGTGAAAACCTAC+TGG | - | chr8.1:4248626-4248645 | MS.gene035683:CDS | 40.0% | |
| ACATTGTACACACTGAAGGT+GGG | - | chr8.1:4247770-4247789 | MS.gene035683:intron | 40.0% | |
| ACTTAAGTGTGTGTGCATAC+TGG | - | chr8.1:4246875-4246894 | MS.gene035683:intron | 40.0% | |
| ATATCTCCAATCAGCAGAAC+TGG | + | chr8.1:4244595-4244614 | None:intergenic | 40.0% | |
| CACCTTGTCATCATGGTTAA+TGG | - | chr8.1:4244462-4244481 | MS.gene035683:intron | 40.0% | |
| CAGAAATTGTGACTGCAAAG+AGG | - | chr8.1:4245795-4245814 | MS.gene035683:intron | 40.0% | |
| CAGATGCCAGGCAAAAATAA+AGG | + | chr8.1:4246007-4246026 | None:intergenic | 40.0% | |
| CATAGTCAAGCTATTGGGAT+AGG | - | chr8.1:4246808-4246827 | MS.gene035683:intron | 40.0% | |
| CTTCAGTGTGTACAATGTGT+GGG | + | chr8.1:4247768-4247787 | None:intergenic | 40.0% | |
| GAAATGGAAGCTACAAGAAC+CGG | + | chr8.1:4246933-4246952 | None:intergenic | 40.0% | |
| GAATTTCCAGTTCTGCTGAT+TGG | - | chr8.1:4244586-4244605 | MS.gene035683:intron | 40.0% | |
| GATGCTCTTCTTTCAAGGAA+AGG | + | chr8.1:4246967-4246986 | None:intergenic | 40.0% | |
| GCTTTCAGAAGAGTAAACAG+CGG | - | chr8.1:4248397-4248416 | MS.gene035683:intron | 40.0% | |
| GGAACATCTAGCTGAAATTG+TGG | + | chr8.1:4248582-4248601 | None:intergenic | 40.0% | |
| GGCCAAAAAATTGACATGGA+AGG | - | chr8.1:4247835-4247854 | MS.gene035683:intron | 40.0% | |
| GGGAAGTTTAAGAGACCAAA+AGG | + | chr8.1:4245533-4245552 | None:intergenic | 40.0% | |
| GTGTTGAAGATATGGTTGGA+TGG | - | chr8.1:4247592-4247611 | MS.gene035683:intron | 40.0% | |
| TACTATCTATTGTCAGACGC+TGG | - | chr8.1:4245659-4245678 | MS.gene035683:intron | 40.0% | |
| TCCCAATAGCTTGACTATGA+TGG | + | chr8.1:4246807-4246826 | None:intergenic | 40.0% | |
| TGCCAGGCAAAAATAAAGGT+AGG | + | chr8.1:4246003-4246022 | None:intergenic | 40.0% | |
| TGCCATTAACCATGATGACA+AGG | + | chr8.1:4244467-4244486 | None:intergenic | 40.0% | |
| TGGAGGCCAAAAAATTGACA+TGG | - | chr8.1:4247831-4247850 | MS.gene035683:intron | 40.0% | |
| TGTATCACGTTTCAGCATCA+TGG | - | chr8.1:4245965-4245984 | MS.gene035683:CDS | 40.0% | |
| TTAACCATGATGACAAGGTG+AGG | + | chr8.1:4244462-4244481 | None:intergenic | 40.0% | |
| TTTGCAGTCACAATTTCTGC+AGG | + | chr8.1:4245794-4245813 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGATGACTGTGA+TGG | + | chr8.1:4246069-4246088 | None:intergenic | 40.0% |
| ! | AGAGATTTTGCCGCCTATTT+AGG | - | chr8.1:4244850-4244869 | MS.gene035683:intron | 40.0% |
| ! | AGTTCTGCTGATTGGAGATA+TGG | - | chr8.1:4244594-4244613 | MS.gene035683:intron | 40.0% |
| ! | CTCTTTTGTGGCACATTCTT+TGG | - | chr8.1:4245699-4245718 | MS.gene035683:CDS | 40.0% |
| ! | GAAAACCTACTGGTTGCATT+CGG | - | chr8.1:4248636-4248655 | MS.gene035683:CDS | 40.0% |
| ! | GAAGAAGGAAGAGTTGGTTA+CGG | + | chr8.1:4244665-4244684 | None:intergenic | 40.0% |
| ! | GTTGCAGAAGATCTCTTTTG+TGG | - | chr8.1:4245687-4245706 | MS.gene035683:intron | 40.0% |
| ! | TTCAAGTTCAAACCCAAGCT+TGG | - | chr8.1:4244801-4244820 | MS.gene035683:intron | 40.0% |
| ! | TTTTGTGGGACCTAAATAGG+CGG | + | chr8.1:4244863-4244882 | None:intergenic | 40.0% |
| !! | AAGTTACAGACCGGTTTTCA+TGG | - | chr8.1:4246339-4246358 | MS.gene035683:intron | 40.0% |
| !! | CGTGAATTGACTTGGTTTGA+GGG | - | chr8.1:4245104-4245123 | MS.gene035683:CDS | 40.0% |
| !! | GATCTCTTCTCATCGCTTTT+TGG | - | chr8.1:4244331-4244350 | MS.gene035683:intron | 40.0% |
| !! | TCGTGAATTGACTTGGTTTG+AGG | - | chr8.1:4245103-4245122 | MS.gene035683:CDS | 40.0% |
| !!! | CACCTACCTTTATTTTTGCC+TGG | - | chr8.1:4245998-4246017 | MS.gene035683:intron | 40.0% |
| !!! | GTTTGAGGGTGTAGTTTTGA+CGG | - | chr8.1:4245118-4245137 | MS.gene035683:CDS | 40.0% |
| AAAGAGATCTTCTGCAACCC+AGG | + | chr8.1:4245685-4245704 | None:intergenic | 45.0% | |
| ATAATTAGCTCGTGTGGCAG+AGG | + | chr8.1:4247486-4247505 | None:intergenic | 45.0% | |
| ATGACAAGGTGAGGAGGAAT+GGG | + | chr8.1:4244453-4244472 | None:intergenic | 45.0% | |
| ATGTTCCGTGCCATGAAAAC+CGG | + | chr8.1:4246352-4246371 | None:intergenic | 45.0% | |
| ATGTTGACGCCGAATTGATG+AGG | + | chr8.1:4247622-4247641 | None:intergenic | 45.0% | |
| CACATTGTACACACTGAAGG+TGG | - | chr8.1:4247769-4247788 | MS.gene035683:intron | 45.0% | |
| CAGAATCCTCAATCATTCGG+AGG | + | chr8.1:4247071-4247090 | None:intergenic | 45.0% | |
| CATTATGAAGCCAGAATCGC+TGG | - | chr8.1:4245850-4245869 | MS.gene035683:CDS | 45.0% | |
| CCACACATTGTACACACTGA+AGG | - | chr8.1:4247766-4247785 | MS.gene035683:intron | 45.0% | |
| CCTTCAGTGTGTACAATGTG+TGG | + | chr8.1:4247769-4247788 | None:intergenic | 45.0% | |
| GCGTCAACATGAACTTCCAA+AGG | - | chr8.1:4247632-4247651 | MS.gene035683:intron | 45.0% | |
| GGATGGCCTATGAAGATATC+TGG | + | chr8.1:4246530-4246549 | None:intergenic | 45.0% | |
| TACTGCTCACAGTACAATCC+AGG | - | chr8.1:4248422-4248441 | MS.gene035683:intron | 45.0% | |
| TCAAATGTCCATACCTGCAC+AGG | + | chr8.1:4246551-4246570 | None:intergenic | 45.0% | |
| TCAATCATTCGGAGGAGAAG+AGG | + | chr8.1:4247063-4247082 | None:intergenic | 45.0% | |
| TCTTCTCCTCCGAATGATTG+AGG | - | chr8.1:4247062-4247081 | MS.gene035683:CDS | 45.0% | |
| TGAGAGGAAGAAGGAAGAGT+TGG | + | chr8.1:4244671-4244690 | None:intergenic | 45.0% | |
| TGGTTAATGGCATTGTTGGC+AGG | - | chr8.1:4244475-4244494 | MS.gene035683:intron | 45.0% | |
| TGGTTCAAGAGGACATAGAC+AGG | - | chr8.1:4245915-4245934 | MS.gene035683:CDS | 45.0% | |
| TGTCCTCTTGAACCAAGATG+TGG | + | chr8.1:4245910-4245929 | None:intergenic | 45.0% | |
| TTCATTGAGATGTCACGGCT+CGG | - | chr8.1:4244749-4244768 | MS.gene035683:intron | 45.0% | |
| TTTGTGGCACATTCTTTGGG+AGG | - | chr8.1:4245703-4245722 | MS.gene035683:CDS | 45.0% | |
| ! | AATGCCCTTTCATCTAGAGC+TGG | + | chr8.1:4248513-4248532 | None:intergenic | 45.0% |
| ! | GATGGAGCACCTCATCAATT+CGG | - | chr8.1:4247610-4247629 | MS.gene035683:intron | 45.0% |
| ! | TGCTGATTGGAGATATGGTG+CGG | - | chr8.1:4244599-4244618 | MS.gene035683:intron | 45.0% |
| ! | TTTCATCGTCGACGATTTGG+TGG | - | chr8.1:4244369-4244388 | MS.gene035683:intron | 45.0% |
| !! | GCATGTGCTGACTTTGACAT+GGG | + | chr8.1:4247343-4247362 | None:intergenic | 45.0% |
| !! | GCTCTCTTCTAGCTTAACCA+AGG | - | chr8.1:4244771-4244790 | MS.gene035683:intron | 45.0% |
| !! | TGCATGTGCTGACTTTGACA+TGG | + | chr8.1:4247344-4247363 | None:intergenic | 45.0% |
| !!! | GGCTAGCTGAAGAGGTATTT+TGG | - | chr8.1:4245492-4245511 | MS.gene035683:intron | 45.0% |
| ACCATCCGAATGCAACCAGT+AGG | + | chr8.1:4248644-4248663 | None:intergenic | 50.0% | |
| ACCATGATGACAAGGTGAGG+AGG | + | chr8.1:4244459-4244478 | None:intergenic | 50.0% | |
| ACGCCACATCTTGGTTCAAG+AGG | - | chr8.1:4245904-4245923 | MS.gene035683:CDS | 50.0% | |
| ATCATTCGGAGGAGAAGAGG+AGG | + | chr8.1:4247060-4247079 | None:intergenic | 50.0% | |
| ATGTCCATACCTGCACAGGA+TGG | + | chr8.1:4246547-4246566 | None:intergenic | 50.0% | |
| CGGTGGACGATGACTTTATC+TGG | + | chr8.1:4244645-4244664 | None:intergenic | 50.0% | |
| GAGTTTATTGACAGCCCTGC+AGG | - | chr8.1:4247452-4247471 | MS.gene035683:CDS | 50.0% | |
| GATGACAAGGTGAGGAGGAA+TGG | + | chr8.1:4244454-4244473 | None:intergenic | 50.0% | |
| GATGATAAGGGGTCTCACTC+AGG | - | chr8.1:4248350-4248369 | MS.gene035683:intron | 50.0% | |
| GGGTCTCACTCAGGTTCATT+GGG | - | chr8.1:4248359-4248378 | MS.gene035683:intron | 50.0% | |
| TCCTCCTCACCTTGTCATCA+TGG | - | chr8.1:4244455-4244474 | MS.gene035683:intron | 50.0% | |
| TCTTGAACCAAGATGTGGCG+TGG | + | chr8.1:4245905-4245924 | None:intergenic | 50.0% | |
| TGAACTTGAACCAGCGACCT+TGG | + | chr8.1:4244791-4244810 | None:intergenic | 50.0% | |
| TTCCATCATCGTTGTCCGTG+AGG | + | chr8.1:4247035-4247054 | None:intergenic | 50.0% | |
| TTCCTCACGGACAACGATGA+TGG | - | chr8.1:4247030-4247049 | MS.gene035683:CDS | 50.0% | |
| ! | ACATTCTTTGGGAGGCTTGG+TGG | - | chr8.1:4245711-4245730 | MS.gene035683:CDS | 50.0% |
| ! | ACCTACTGGTTGCATTCGGA+TGG | - | chr8.1:4248640-4248659 | MS.gene035683:CDS | 50.0% |
| ! | GAAGGAAGAGTTGGTTACGG+TGG | + | chr8.1:4244662-4244681 | None:intergenic | 50.0% |
| ! | GTGTTGATACCATGGGTGAG+AGG | - | chr8.1:4245471-4245490 | MS.gene035683:intron | 50.0% |
| ! | TCTAGCTTAACCAAGGTCGC+TGG | - | chr8.1:4244778-4244797 | MS.gene035683:intron | 50.0% |
| !! | ACAGACCGGTTTTCATGGCA+CGG | - | chr8.1:4246344-4246363 | MS.gene035683:intron | 50.0% |
| !! | TGGCTCTAAACCAGCGATTC+TGG | + | chr8.1:4245863-4245882 | None:intergenic | 50.0% |
| ACCAAGATGTGGCGTGGCAA+AGG | + | chr8.1:4245899-4245918 | None:intergenic | 55.0% | |
| ACCCAAGCTTGGACAGACAG+CGG | - | chr8.1:4244812-4244831 | MS.gene035683:intron | 55.0% | |
| ACCTTTGCCACGCCACATCT+TGG | - | chr8.1:4245895-4245914 | MS.gene035683:CDS | 55.0% | |
| CTTCATAGGCCATCCTGTGC+AGG | - | chr8.1:4246535-4246554 | MS.gene035683:intron | 55.0% | |
| GGGGTCTCACTCAGGTTCAT+TGG | - | chr8.1:4248358-4248377 | MS.gene035683:intron | 55.0% | |
| GTCTACGCAGTTGTGTGCGA+AGG | - | chr8.1:4244895-4244914 | MS.gene035683:intron | 55.0% | |
| GTGCGGAGCAGTTTCTCAAG+AGG | - | chr8.1:4244616-4244635 | MS.gene035683:intron | 55.0% | |
| TAGGCCATCCTGTGCAGGTA+TGG | - | chr8.1:4246540-4246559 | MS.gene035683:intron | 55.0% | |
| TCTATTGTCAGACGCTGGCC+TGG | - | chr8.1:4245664-4245683 | MS.gene035683:intron | 55.0% | |
| ! | CTATTGTCAGACGCTGGCCT+GGG | - | chr8.1:4245665-4245684 | MS.gene035683:intron | 55.0% |
| ! | GGCACATTCTTTGGGAGGCT+TGG | - | chr8.1:4245708-4245727 | MS.gene035683:CDS | 55.0% |
| ! | TCAGGTTCATTGGGAGCGTG+TGG | - | chr8.1:4248368-4248387 | MS.gene035683:intron | 55.0% |
| ! | TTCAGCTAGCCTCTCACCCA+TGG | + | chr8.1:4245483-4245502 | None:intergenic | 55.0% |
| GCCGCTGTCTGTCCAAGCTT+GGG | + | chr8.1:4244816-4244835 | None:intergenic | 60.0% | |
| ! | CTCGTGTGGCAGAGGAGCAT+GGG | + | chr8.1:4247478-4247497 | None:intergenic | 60.0% |
| ! | GGGTGAGAGGCTAGCTGAAG+AGG | - | chr8.1:4245484-4245503 | MS.gene035683:intron | 60.0% |
| CGCCGCTGTCTGTCCAAGCT+TGG | + | chr8.1:4244817-4244836 | None:intergenic | 65.0% | |
| GCTCGTGTGGCAGAGGAGCA+TGG | + | chr8.1:4247479-4247498 | None:intergenic | 65.0% | |
| ! | CAGAGGAGCATGGGCCTGCA+GGG | + | chr8.1:4247469-4247488 | None:intergenic | 65.0% |
| ! | GCAGAGGAGCATGGGCCTGC+AGG | + | chr8.1:4247470-4247489 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4244234 | 4248705 | 4244234 | ID=MS.gene035683 |
| chr8.1 | mRNA | 4244234 | 4248705 | 4244234 | ID=MS.gene035683.t1;Parent=MS.gene035683 |
| chr8.1 | exon | 4248443 | 4248705 | 4248443 | ID=MS.gene035683.t1.exon1;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4248443 | 4248705 | 4248443 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4248276 | 4248343 | 4248276 | ID=MS.gene035683.t1.exon2;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4248276 | 4248343 | 4248276 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4247434 | 4247504 | 4247434 | ID=MS.gene035683.t1.exon3;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4247434 | 4247504 | 4247434 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4247003 | 4247281 | 4247003 | ID=MS.gene035683.t1.exon4;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4247003 | 4247281 | 4247003 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4245833 | 4245996 | 4245833 | ID=MS.gene035683.t1.exon5;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4245833 | 4245996 | 4245833 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4245689 | 4245744 | 4245689 | ID=MS.gene035683.t1.exon6;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4245689 | 4245744 | 4245689 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4245286 | 4245338 | 4245286 | ID=MS.gene035683.t1.exon7;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4245286 | 4245338 | 4245286 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4245083 | 4245203 | 4245083 | ID=MS.gene035683.t1.exon8;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4245083 | 4245203 | 4245083 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4244496 | 4244593 | 4244496 | ID=MS.gene035683.t1.exon9;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4244496 | 4244593 | 4244496 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| chr8.1 | exon | 4244234 | 4244305 | 4244234 | ID=MS.gene035683.t1.exon10;Parent=MS.gene035683.t1 |
| chr8.1 | CDS | 4244234 | 4244305 | 4244234 | ID=cds.MS.gene035683.t1;Parent=MS.gene035683.t1 |
| Gene Sequence |
| Protein sequence |
