Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036116.t1 | XP_013468526.1 | 93.7 | 586 | 37 | 0 | 1 | 586 | 53 | 638 | 0.00E+00 | 1081.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036116.t1 | Q58G01 | 40.4 | 659 | 287 | 16 | 16 | 586 | 52 | 692 | 1.2e-98 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036116.t1 | A0A072VMB0 | 93.7 | 586 | 37 | 0 | 1 | 586 | 53 | 638 | 0.0e+00 | 1081.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97017 | MS.gene036116 | PPI |
| MS.gene49313 | MS.gene036116 | PPI |
| MS.gene020354 | MS.gene036116 | PPI |
| MS.gene036116 | MS.gene036119 | PPI |
| MS.gene23501 | MS.gene036116 | PPI |
| MS.gene036116 | MS.gene018723 | PPI |
| MS.gene50611 | MS.gene036116 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036116.t1 | MTR_1g070180 | 93.686 | 586 | 37 | 0 | 1 | 586 | 53 | 638 | 0.0 | 1134 |
| MS.gene036116.t1 | MTR_7g096650 | 56.098 | 615 | 204 | 8 | 4 | 586 | 56 | 636 | 0.0 | 584 |
| MS.gene036116.t1 | MTR_7g096650 | 54.742 | 601 | 214 | 8 | 4 | 586 | 56 | 616 | 0.0 | 575 |
| MS.gene036116.t1 | MTR_7g096650 | 56.277 | 462 | 167 | 5 | 126 | 586 | 13 | 440 | 5.79e-165 | 478 |
| MS.gene036116.t1 | MTR_7g063470 | 28.296 | 622 | 359 | 23 | 13 | 586 | 24 | 606 | 2.77e-52 | 189 |
| MS.gene036116.t1 | MTR_7g063470 | 28.296 | 622 | 359 | 23 | 13 | 586 | 74 | 656 | 4.09e-52 | 190 |
| MS.gene036116.t1 | MTR_4g051565 | 55.491 | 173 | 73 | 2 | 414 | 586 | 619 | 787 | 5.92e-52 | 191 |
| MS.gene036116.t1 | MTR_4g051565 | 34.454 | 119 | 63 | 3 | 35 | 140 | 11 | 127 | 7.87e-12 | 68.9 |
| MS.gene036116.t1 | MTR_4g051565 | 55.491 | 173 | 73 | 2 | 414 | 586 | 707 | 875 | 1.39e-51 | 191 |
| MS.gene036116.t1 | MTR_4g051565 | 34.454 | 119 | 63 | 3 | 35 | 140 | 99 | 215 | 8.51e-12 | 68.6 |
| MS.gene036116.t1 | MTR_2g087295 | 53.179 | 173 | 77 | 2 | 414 | 586 | 668 | 836 | 6.66e-50 | 186 |
| MS.gene036116.t1 | MTR_2g087295 | 32.520 | 123 | 63 | 3 | 31 | 140 | 99 | 214 | 4.57e-11 | 66.2 |
| MS.gene036116.t1 | MTR_1g077640 | 44.375 | 160 | 84 | 2 | 430 | 586 | 573 | 730 | 7.87e-36 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036116.t1 | AT2G31280 | 40.606 | 660 | 284 | 17 | 16 | 586 | 52 | 692 | 9.22e-120 | 371 |
| MS.gene036116.t1 | AT2G31280 | 40.606 | 660 | 284 | 17 | 16 | 586 | 52 | 692 | 1.25e-119 | 371 |
| MS.gene036116.t1 | AT2G31280 | 39.280 | 639 | 292 | 17 | 16 | 586 | 78 | 688 | 1.14e-105 | 334 |
| MS.gene036116.t1 | AT1G06150 | 48.579 | 387 | 172 | 10 | 209 | 586 | 341 | 709 | 2.69e-88 | 289 |
| MS.gene036116.t1 | AT1G06150 | 54.054 | 111 | 38 | 2 | 8 | 105 | 51 | 161 | 3.27e-26 | 114 |
| MS.gene036116.t1 | AT1G06150 | 48.579 | 387 | 170 | 11 | 209 | 586 | 341 | 707 | 1.38e-86 | 284 |
| MS.gene036116.t1 | AT1G06150 | 54.054 | 111 | 38 | 2 | 8 | 105 | 51 | 161 | 3.20e-26 | 114 |
| MS.gene036116.t1 | AT2G27230 | 40.206 | 291 | 145 | 7 | 300 | 586 | 336 | 601 | 2.97e-48 | 179 |
| MS.gene036116.t1 | AT2G27230 | 33.600 | 125 | 62 | 4 | 30 | 138 | 77 | 196 | 2.91e-11 | 67.0 |
| MS.gene036116.t1 | AT2G27230 | 40.206 | 291 | 145 | 7 | 300 | 586 | 336 | 601 | 2.97e-48 | 179 |
| MS.gene036116.t1 | AT2G27230 | 33.600 | 125 | 62 | 4 | 30 | 138 | 77 | 196 | 2.91e-11 | 67.0 |
| MS.gene036116.t1 | AT1G64625 | 46.626 | 163 | 72 | 1 | 424 | 586 | 327 | 474 | 3.31e-42 | 159 |
| MS.gene036116.t1 | AT1G64625 | 46.626 | 163 | 72 | 1 | 424 | 586 | 351 | 498 | 5.28e-42 | 159 |
| MS.gene036116.t1 | AT1G64625 | 46.626 | 163 | 72 | 1 | 424 | 586 | 341 | 488 | 5.54e-42 | 159 |
| MS.gene036116.t1 | AT1G64625 | 56.977 | 86 | 32 | 1 | 424 | 509 | 341 | 421 | 1.66e-24 | 106 |
Find 110 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTCAGCATACTTTATTTA+AGG | 0.129093 | 1.3:-50125619 | None:intergenic |
| TGATGGACTTGTTAAATCTT+TGG | 0.262539 | 1.3:-50126728 | None:intergenic |
| ATCTCGTCCGGAACATCTTT+TGG | 0.269914 | 1.3:+50126975 | MS.gene036116:CDS |
| CTACAATATCATTATTACTA+TGG | 0.303371 | 1.3:-50127020 | None:intergenic |
| CATCATAGTTTGAGTTTGTC+AGG | 0.324738 | 1.3:+50127186 | MS.gene036116:CDS |
| CTTCTGCTATCTCAAGAAAA+TGG | 0.337897 | 1.3:-50128573 | None:intergenic |
| AATTTCAAGCCCCTCGTGTT+TGG | 0.340965 | 1.3:-50126509 | None:intergenic |
| GTTGGACAGGTAGCTGTTAC+TGG | 0.341561 | 1.3:+50125351 | MS.gene036116:CDS |
| CTCTGATTATCAACAACAAC+AGG | 0.341637 | 1.3:+50128335 | MS.gene036116:CDS |
| AGCCTTCTGAATTAATATTT+CGG | 0.342951 | 1.3:-50127122 | None:intergenic |
| TCTATTCGTGATCACACATT+AGG | 0.346800 | 1.3:+50126340 | MS.gene036116:CDS |
| GTGTGTTACGTTTCACGCTT+TGG | 0.365954 | 1.3:-50126381 | None:intergenic |
| GACGGGTGAAACACTTGATA+TGG | 0.366173 | 1.3:+50126414 | MS.gene036116:CDS |
| TCACACATCCTTTCATTTGA+AGG | 0.372706 | 1.3:-50126613 | None:intergenic |
| CAAGATACCTTTGCTCCGTT+TGG | 0.374894 | 1.3:-50127399 | None:intergenic |
| CCGTATCATGTATATTCGTT+AGG | 0.377911 | 1.3:+50125224 | MS.gene036116:CDS |
| AGTTGTCTGTCCCTTGGTCT+AGG | 0.381960 | 1.3:-50127339 | None:intergenic |
| CAGCATGCTTAGTTACGCTT+TGG | 0.384514 | 1.3:-50127583 | None:intergenic |
| ACTGATCCAAGACCGTATTA+AGG | 0.395166 | 1.3:+50127359 | MS.gene036116:CDS |
| GTAGAAAATCTTAGTAAGAA+TGG | 0.406604 | 1.3:+50128411 | MS.gene036116:CDS |
| TCATTATGAACAGAAACTTC+AGG | 0.416026 | 1.3:-50127099 | None:intergenic |
| CGTATCATGTATATTCGTTA+GGG | 0.420977 | 1.3:+50125225 | MS.gene036116:CDS |
| TTAACTCCTTAATACGGTCT+TGG | 0.421661 | 1.3:-50127365 | None:intergenic |
| CCACTTGGAGTTGTTCAACT+TGG | 0.421728 | 1.3:+50125594 | MS.gene036116:CDS |
| AGCAGAAGCCGTAAGAAGCT+TGG | 0.422035 | 1.3:+50128588 | MS.gene036116:CDS |
| AACTGCGCAGTTGCATCATA+TGG | 0.422500 | 1.3:+50128293 | MS.gene036116:intron |
| ATTATTACTATGGCAAACTT+TGG | 0.428962 | 1.3:-50127010 | None:intergenic |
| CGTCAGTCCCAAGCTTCTTA+CGG | 0.431906 | 1.3:-50128596 | None:intergenic |
| TGGATCAGTTGTCTGTCCCT+TGG | 0.434072 | 1.3:-50127345 | None:intergenic |
| CTTGAAATTGACAGCGATCA+AGG | 0.439876 | 1.3:+50126523 | MS.gene036116:CDS |
| TAGAAAATCTTAGTAAGAAT+GGG | 0.442335 | 1.3:+50128412 | MS.gene036116:CDS |
| GACGAGATTCAAAAGTCAAT+TGG | 0.450977 | 1.3:-50126960 | None:intergenic |
| CTAGGCCAGGTGAAAGTTGT+AGG | 0.452487 | 1.3:+50127316 | MS.gene036116:CDS |
| CGCTTTGGATTTGACTAGGA+AGG | 0.470186 | 1.3:-50126366 | None:intergenic |
| GTTCTCTTAACTCCTTAATA+CGG | 0.473917 | 1.3:-50127371 | None:intergenic |
| GTTCAGAAGACCTCTCAAAC+TGG | 0.474775 | 1.3:-50127269 | None:intergenic |
| GCAGAAGCCGTAAGAAGCTT+GGG | 0.478373 | 1.3:+50128589 | MS.gene036116:CDS |
| AGGAAATTTCAATGTGTATG+AGG | 0.478639 | 1.3:-50126812 | None:intergenic |
| CATATGGAAAATGACATTCA+TGG | 0.481714 | 1.3:+50128309 | MS.gene036116:CDS |
| TCCTGTTTCTACAGTATGGT+TGG | 0.484140 | 1.3:+50125333 | MS.gene036116:intron |
| TTTCTACAGTATGGTTGGAC+AGG | 0.486471 | 1.3:+50125338 | MS.gene036116:intron |
| TATTAAGGAGTTAAGAGAAC+TGG | 0.491639 | 1.3:+50127374 | MS.gene036116:CDS |
| AGGATCCTCACCTTAAAAGA+TGG | 0.491951 | 1.3:-50125420 | None:intergenic |
| GTAACGCCCTCCCAATGTCC+TGG | 0.494376 | 1.3:+50126436 | MS.gene036116:CDS |
| ACAACAACAGGGTTCAAGTT+GGG | 0.495964 | 1.3:+50128347 | MS.gene036116:CDS |
| ATGTGTGAAGGGAACAATAA+TGG | 0.497231 | 1.3:+50126628 | MS.gene036116:CDS |
| TACACATTGAAATTTCCTGC+TGG | 0.505845 | 1.3:+50126817 | MS.gene036116:CDS |
| TGACATCGATTGAAGCAAGA+TGG | 0.514120 | 1.3:-50126548 | None:intergenic |
| ATCAAGTGTTTCACCCGTCA+TGG | 0.518290 | 1.3:-50126410 | None:intergenic |
| TTACTCTCTTTGAGAAAACC+TGG | 0.521989 | 1.3:-50126865 | None:intergenic |
| CTGACAAACTCAAACTATGA+TGG | 0.527690 | 1.3:-50127185 | None:intergenic |
| ATGTATATTCGTTAGGGGAA+GGG | 0.529135 | 1.3:+50125231 | MS.gene036116:CDS |
| CCTAACGAATATACATGATA+CGG | 0.532424 | 1.3:-50125224 | None:intergenic |
| ATCATTTCCTACATCAGTGC+AGG | 0.536203 | 1.3:+50127053 | MS.gene036116:CDS |
| GTGCAGTATTGATTCACTGT+TGG | 0.539514 | 1.3:+50127532 | MS.gene036116:intron |
| ACTGCTTCCAAAAGATGTTC+CGG | 0.539659 | 1.3:-50126982 | None:intergenic |
| TAATGATATTGTAGATAATG+AGG | 0.540266 | 1.3:+50127029 | MS.gene036116:CDS |
| ACAGGGTTCAAGTTGGGCAA+TGG | 0.540297 | 1.3:+50128353 | MS.gene036116:CDS |
| ACCTTGGAGCAGATCTATGT+TGG | 0.541880 | 1.3:+50125158 | MS.gene036116:CDS |
| CATGTATATTCGTTAGGGGA+AGG | 0.541965 | 1.3:+50125230 | MS.gene036116:CDS |
| GCAGAGAATACGAAACAAGT+AGG | 0.544022 | 1.3:+50126583 | MS.gene036116:CDS |
| TCAACCATCTCATATTAAAG+AGG | 0.552455 | 1.3:+50127155 | MS.gene036116:CDS |
| AACAACAACAGGGTTCAAGT+TGG | 0.556005 | 1.3:+50128346 | MS.gene036116:CDS |
| ATCATAGTTTGAGTTTGTCA+GGG | 0.556500 | 1.3:+50127187 | MS.gene036116:CDS |
| ATATCCTCTTTAATATGAGA+TGG | 0.557881 | 1.3:-50127159 | None:intergenic |
| TTACATGAAGCACTTGGACC+AGG | 0.559643 | 1.3:+50126847 | MS.gene036116:CDS |
| GACCGAAATATTAATTCAGA+AGG | 0.563885 | 1.3:+50127120 | MS.gene036116:CDS |
| CAAATGAAAGGATGTGTGAA+GGG | 0.564926 | 1.3:+50126617 | MS.gene036116:CDS |
| TCAAGTTGGGCAATGGAGGT+AGG | 0.566298 | 1.3:+50128360 | MS.gene036116:CDS |
| GGATGAAACCTTCAAATGAA+AGG | 0.568936 | 1.3:+50126605 | MS.gene036116:CDS |
| TCAGAAAATGACTATTGATG+TGG | 0.577639 | 1.3:+50126486 | MS.gene036116:CDS |
| TCATGTAACTCATAACCAGC+AGG | 0.580707 | 1.3:-50126832 | None:intergenic |
| CTAGGCCTACAACTTTCACC+TGG | 0.582898 | 1.3:-50127321 | None:intergenic |
| TTCACGCTTTGGATTTGACT+AGG | 0.583058 | 1.3:-50126370 | None:intergenic |
| AACACACAGAAAACCATGAC+GGG | 0.583428 | 1.3:+50126397 | MS.gene036116:CDS |
| GGGTTCAAGTTGGGCAATGG+AGG | 0.584395 | 1.3:+50128356 | MS.gene036116:CDS |
| TCAAATGAAAGGATGTGTGA+AGG | 0.588450 | 1.3:+50126616 | MS.gene036116:CDS |
| TAACGCCCTCCCAATGTCCT+GGG | 0.589847 | 1.3:+50126437 | MS.gene036116:CDS |
| CAGAGAATACGAAACAAGTA+GGG | 0.591572 | 1.3:+50126584 | MS.gene036116:CDS |
| CTGTTGTTGTTGATAATCAG+AGG | 0.593214 | 1.3:-50128334 | None:intergenic |
| TTAAGAGAACTGGTGCCAAA+CGG | 0.593259 | 1.3:+50127384 | MS.gene036116:CDS |
| ATTGTGTCCTGCACTGATGT+AGG | 0.598822 | 1.3:-50127060 | None:intergenic |
| ACTGGTGCCAAACGGAGCAA+AGG | 0.604316 | 1.3:+50127392 | MS.gene036116:CDS |
| TATGAGTTACATGAAGCACT+TGG | 0.610930 | 1.3:+50126841 | MS.gene036116:CDS |
| TATTGATGTGGCCAAACACG+AGG | 0.617153 | 1.3:+50126498 | MS.gene036116:CDS |
| TTGAGTTTGTCAGGGATCTG+CGG | 0.621537 | 1.3:+50127195 | MS.gene036116:CDS |
| AAAGTTGTAGGCCTAGACCA+AGG | 0.627816 | 1.3:+50127328 | MS.gene036116:CDS |
| TACATCAGTGCAGGACACAA+TGG | 0.629927 | 1.3:+50127062 | MS.gene036116:CDS |
| AATGCAGGTTGGTGAAGACA+TGG | 0.636281 | 1.3:+50126285 | MS.gene036116:intron |
| AACTGGTTACTACACGAGCT+AGG | 0.639086 | 1.3:-50127252 | None:intergenic |
| GAATGGGCAGATGCTTGTTG+AGG | 0.640182 | 1.3:+50128428 | MS.gene036116:CDS |
| GTCGTAGCAGTACTACCACT+TGG | 0.641686 | 1.3:+50125579 | MS.gene036116:CDS |
| CTGTTACTGGAAAACATCAG+TGG | 0.641892 | 1.3:+50125364 | MS.gene036116:CDS |
| TCCAACATAGATCTGCTCCA+AGG | 0.643426 | 1.3:-50125159 | None:intergenic |
| AGTTGGGCAATGGAGGTAGG+AGG | 0.643833 | 1.3:+50128363 | MS.gene036116:CDS |
| CGTGTAGTAACCAGTTTGAG+AGG | 0.651078 | 1.3:+50127259 | MS.gene036116:CDS |
| AAGTTGTAGGCCTAGACCAA+GGG | 0.652681 | 1.3:+50127329 | MS.gene036116:CDS |
| TCGCAACAGATAATCCTAGA+GGG | 0.655424 | 1.3:-50125196 | None:intergenic |
| TTCGCAACAGATAATCCTAG+AGG | 0.664107 | 1.3:-50125197 | None:intergenic |
| TAACACACAGAAAACCATGA+CGG | 0.666602 | 1.3:+50126396 | MS.gene036116:CDS |
| TGCAGGTTGGTGAAGACATG+GGG | 0.669819 | 1.3:+50126287 | MS.gene036116:intron |
| ATGCAGGTTGGTGAAGACAT+GGG | 0.672643 | 1.3:+50126286 | MS.gene036116:intron |
| ATTGATGTGGCCAAACACGA+GGG | 0.677054 | 1.3:+50126499 | MS.gene036116:CDS |
| CCAAGTTGAACAACTCCAAG+TGG | 0.686515 | 1.3:-50125594 | None:intergenic |
| TTGATGTGGCCAAACACGAG+GGG | 0.694860 | 1.3:+50126500 | MS.gene036116:CDS |
| TATGTGCTCTCAGAACACCT+TGG | 0.696188 | 1.3:+50125142 | None:intergenic |
| CATGCTACAGATGCTCTGTG+AGG | 0.715737 | 1.3:+50128543 | MS.gene036116:intron |
| GTATCATGTATATTCGTTAG+GGG | 0.726980 | 1.3:+50125226 | MS.gene036116:CDS |
| TCTGATTATCAACAACAACA+GGG | 0.741738 | 1.3:+50128336 | MS.gene036116:CDS |
| AACGGTGCAAGTGAAGCTCG+TGG | 0.750508 | 1.3:+50128625 | MS.gene036116:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATAAAGAATAA+TGG | - | chr1.3:50125725-50125744 | None:intergenic | 10.0% |
| !! | ATATTTGACATAAAATATAA+AGG | + | chr1.3:50126016-50126035 | MS.gene036116:intron | 10.0% |
| !! | ATTGATGTTTATAAAATTAA+GGG | - | chr1.3:50128120-50128139 | None:intergenic | 10.0% |
| !! | TATTGATGTTTATAAAATTA+AGG | - | chr1.3:50128121-50128140 | None:intergenic | 10.0% |
| !! | AAATTAGGAGATTATATAAA+TGG | - | chr1.3:50125824-50125843 | None:intergenic | 15.0% |
| !! | AAGAAATTTAAGCATTAAAA+GGG | - | chr1.3:50125660-50125679 | None:intergenic | 15.0% |
| !! | AATTAGGAGATTATATAAAT+GGG | - | chr1.3:50125823-50125842 | None:intergenic | 15.0% |
| !! | TTTATATAATCTCCTAATTT+CGG | + | chr1.3:50125824-50125843 | MS.gene036116:intron | 15.0% |
| !! | TTTGCTTATTATGTATAATA+AGG | - | chr1.3:50125900-50125919 | None:intergenic | 15.0% |
| !!! | AAATGCCATTATTTTATTAT+TGG | - | chr1.3:50127722-50127741 | None:intergenic | 15.0% |
| !!! | AATGCCATTATTTTATTATT+GGG | - | chr1.3:50127721-50127740 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAACATTGTTTT+CGG | - | chr1.3:50128009-50128028 | None:intergenic | 15.0% |
| !!! | TATGTCAAATATATTAGTTT+TGG | - | chr1.3:50126008-50126027 | None:intergenic | 15.0% |
| !! | AAACATCAATAAGTATGAAA+TGG | + | chr1.3:50128130-50128149 | MS.gene036116:intron | 20.0% |
| !! | ATGTAGTTGAATAAATTTGA+CGG | + | chr1.3:50126168-50126187 | MS.gene036116:intron | 20.0% |
| !! | CAAGAAATTTAAGCATTAAA+AGG | - | chr1.3:50125661-50125680 | None:intergenic | 20.0% |
| !! | CTACAATATCATTATTACTA+TGG | - | chr1.3:50127023-50127042 | None:intergenic | 20.0% |
| !! | TAATGATATTGTAGATAATG+AGG | + | chr1.3:50127029-50127048 | MS.gene036116:CDS | 20.0% |
| !! | TAGAAAATCTTAGTAAGAAT+GGG | + | chr1.3:50128412-50128431 | MS.gene036116:CDS | 20.0% |
| !! | TCTTCCCAATAATAAAATAA+TGG | + | chr1.3:50127714-50127733 | MS.gene036116:intron | 20.0% |
| !!! | AAGAGAGTAAATATTTTGAT+TGG | + | chr1.3:50126878-50126897 | MS.gene036116:CDS | 20.0% |
| !!! | ATTAACATTTTGCTAACAAA+TGG | - | chr1.3:50126239-50126258 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAAACAAAGACAA+AGG | + | chr1.3:50127619-50127638 | MS.gene036116:CDS | 20.0% |
| !!! | TAAAGGCATATAATTTTTAG+TGG | + | chr1.3:50126033-50126052 | MS.gene036116:intron | 20.0% |
| ! | AGCCTTCTGAATTAATATTT+CGG | - | chr1.3:50127125-50127144 | None:intergenic | 25.0% |
| ! | ATATCCTCTTTAATATGAGA+TGG | - | chr1.3:50127162-50127181 | None:intergenic | 25.0% |
| ! | ATCTAAAAACAGCAAAAAGA+GGG | + | chr1.3:50127293-50127312 | MS.gene036116:CDS | 25.0% |
| ! | ATTATTACTATGGCAAACTT+TGG | - | chr1.3:50127013-50127032 | None:intergenic | 25.0% |
| ! | GTAGAAAATCTTAGTAAGAA+TGG | + | chr1.3:50128411-50128430 | MS.gene036116:CDS | 25.0% |
| ! | TCAGTGAAAATAGAAACAAA+CGG | + | chr1.3:50128093-50128112 | MS.gene036116:intron | 25.0% |
| ! | TTTAATCTTAAACTGCATCT+AGG | - | chr1.3:50125283-50125302 | None:intergenic | 25.0% |
| !! | ACATGTAGAAGAAAAACTTT+TGG | - | chr1.3:50127232-50127251 | None:intergenic | 25.0% |
| !! | AGTTAGAGAAAATGCATTTT+TGG | + | chr1.3:50127978-50127997 | MS.gene036116:intron | 25.0% |
| !! | ATACTGAATGAATTTTCAGA+TGG | - | chr1.3:50128389-50128408 | None:intergenic | 25.0% |
| !! | ATGTAGAAGAAAAACTTTTG+GGG | - | chr1.3:50127230-50127249 | None:intergenic | 25.0% |
| !! | CATGTAGAAGAAAAACTTTT+GGG | - | chr1.3:50127231-50127250 | None:intergenic | 25.0% |
| !! | GTTTTTACACAATTCAGTTA+TGG | + | chr1.3:50126693-50126712 | MS.gene036116:CDS | 25.0% |
| !! | TAGTCAGCATACTTTATTTA+AGG | - | chr1.3:50125622-50125641 | None:intergenic | 25.0% |
| !! | TCTAGAAAGAGTATATGTAA+AGG | - | chr1.3:50128477-50128496 | None:intergenic | 25.0% |
| !!! | AATTTCTAGTCCATCTTTTA+AGG | + | chr1.3:50125410-50125429 | MS.gene036116:CDS | 25.0% |
| !!! | ATTACATACATTGATTTGAG+TGG | + | chr1.3:50127771-50127790 | MS.gene036116:intron | 25.0% |
| !!! | GAGTAAATATTTTGATTGGA+CGG | + | chr1.3:50126882-50126901 | MS.gene036116:CDS | 25.0% |
| AACAATTGTCTGTAAATGCA+AGG | - | chr1.3:50125559-50125578 | None:intergenic | 30.0% | |
| AGGAAATTTCAATGTGTATG+AGG | - | chr1.3:50126815-50126834 | None:intergenic | 30.0% | |
| AGTTGCATCATTGAAGAATA+AGG | - | chr1.3:50125443-50125462 | None:intergenic | 30.0% | |
| ATGTATAATAAGGACTGACA+GGG | - | chr1.3:50125890-50125909 | None:intergenic | 30.0% | |
| ATTAGTTATCACTGAAGCAA+TGG | + | chr1.3:50127864-50127883 | MS.gene036116:intron | 30.0% | |
| CATATGGAAAATGACATTCA+TGG | + | chr1.3:50128309-50128328 | MS.gene036116:CDS | 30.0% | |
| CATCTAAAAACAGCAAAAAG+AGG | + | chr1.3:50127292-50127311 | MS.gene036116:CDS | 30.0% | |
| CCTAACGAATATACATGATA+CGG | - | chr1.3:50125227-50125246 | None:intergenic | 30.0% | |
| CGTATCATGTATATTCGTTA+GGG | + | chr1.3:50125225-50125244 | MS.gene036116:CDS | 30.0% | |
| CTTAACTGTGATAGAGAATA+TGG | + | chr1.3:50127950-50127969 | MS.gene036116:intron | 30.0% | |
| GACCGAAATATTAATTCAGA+AGG | + | chr1.3:50127120-50127139 | MS.gene036116:CDS | 30.0% | |
| GTATCATGTATATTCGTTAG+GGG | + | chr1.3:50125226-50125245 | MS.gene036116:CDS | 30.0% | |
| GTGATAACTAATGTTCATCA+AGG | - | chr1.3:50127856-50127875 | None:intergenic | 30.0% | |
| GTTCTCTTAACTCCTTAATA+CGG | - | chr1.3:50127374-50127393 | None:intergenic | 30.0% | |
| TAGCATGTAATTATTGTGCT+CGG | + | chr1.3:50126132-50126151 | MS.gene036116:intron | 30.0% | |
| TATGTATAATAAGGACTGAC+AGG | - | chr1.3:50125891-50125910 | None:intergenic | 30.0% | |
| TATTAAGGAGTTAAGAGAAC+TGG | + | chr1.3:50127374-50127393 | MS.gene036116:CDS | 30.0% | |
| TCAACCATCTCATATTAAAG+AGG | + | chr1.3:50127155-50127174 | MS.gene036116:CDS | 30.0% | |
| TCAGAAAATGACTATTGATG+TGG | + | chr1.3:50126486-50126505 | MS.gene036116:CDS | 30.0% | |
| TCATTATGAACAGAAACTTC+AGG | - | chr1.3:50127102-50127121 | None:intergenic | 30.0% | |
| TCCTGTATAGTAAGATTTGA+AGG | + | chr1.3:50125472-50125491 | MS.gene036116:intron | 30.0% | |
| TCTGATTATCAACAACAACA+GGG | + | chr1.3:50128336-50128355 | MS.gene036116:CDS | 30.0% | |
| TTTAAGCATTAAAAGGGACA+AGG | - | chr1.3:50125654-50125673 | None:intergenic | 30.0% | |
| ! | ATCATAGTTTGAGTTTGTCA+GGG | + | chr1.3:50127187-50127206 | MS.gene036116:CDS | 30.0% |
| ! | ATTCATGATAATGAGCGTAA+GGG | - | chr1.3:50128523-50128542 | None:intergenic | 30.0% |
| ! | TGTAGAAGAAAAACTTTTGG+GGG | - | chr1.3:50127229-50127248 | None:intergenic | 30.0% |
| !! | ACATTGATTTGAGTGGAATT+AGG | + | chr1.3:50127778-50127797 | MS.gene036116:intron | 30.0% |
| !! | CTCATTGTAAAAGTGTTGTA+GGG | - | chr1.3:50128219-50128238 | None:intergenic | 30.0% |
| !! | GTCATTTTCTGATAAACAGT+AGG | - | chr1.3:50126478-50126497 | None:intergenic | 30.0% |
| !! | TGACGGATTGTATAATAGTT+TGG | + | chr1.3:50126185-50126204 | MS.gene036116:intron | 30.0% |
| !! | TGATGGACTTGTTAAATCTT+TGG | - | chr1.3:50126731-50126750 | None:intergenic | 30.0% |
| !! | TGCTTGTTCAATTGCTATTT+AGG | + | chr1.3:50127674-50127693 | MS.gene036116:intron | 30.0% |
| !!! | CTCTTTTTGCTGTTTTTAGA+TGG | - | chr1.3:50127294-50127313 | None:intergenic | 30.0% |
| ACCAAGCAATTACCGAAATT+AGG | - | chr1.3:50125839-50125858 | None:intergenic | 35.0% | |
| ACTTGTAGTTCCAATTCTTG+TGG | + | chr1.3:50127481-50127500 | MS.gene036116:intron | 35.0% | |
| AGACAAAGGTAACGTCTTAT+TGG | + | chr1.3:50127633-50127652 | MS.gene036116:intron | 35.0% | |
| ATGTATATTCGTTAGGGGAA+GGG | + | chr1.3:50125231-50125250 | MS.gene036116:CDS | 35.0% | |
| ATGTGTGAAGGGAACAATAA+TGG | + | chr1.3:50126628-50126647 | MS.gene036116:CDS | 35.0% | |
| CAAATGAAAGGATGTGTGAA+GGG | + | chr1.3:50126617-50126636 | MS.gene036116:CDS | 35.0% | |
| CAGAGAATACGAAACAAGTA+GGG | + | chr1.3:50126584-50126603 | MS.gene036116:CDS | 35.0% | |
| CCGTATCATGTATATTCGTT+AGG | + | chr1.3:50125224-50125243 | MS.gene036116:CDS | 35.0% | |
| CTCTGATTATCAACAACAAC+AGG | + | chr1.3:50128335-50128354 | MS.gene036116:CDS | 35.0% | |
| CTGACAAACTCAAACTATGA+TGG | - | chr1.3:50127188-50127207 | None:intergenic | 35.0% | |
| CTTCTGCTATCTCAAGAAAA+TGG | - | chr1.3:50128576-50128595 | None:intergenic | 35.0% | |
| GACGAGATTCAAAAGTCAAT+TGG | - | chr1.3:50126963-50126982 | None:intergenic | 35.0% | |
| GCCTTCAAATCTTACTATAC+AGG | - | chr1.3:50125476-50125495 | None:intergenic | 35.0% | |
| GGATGAAACCTTCAAATGAA+AGG | + | chr1.3:50126605-50126624 | MS.gene036116:CDS | 35.0% | |
| TAACACACAGAAAACCATGA+CGG | + | chr1.3:50126396-50126415 | MS.gene036116:CDS | 35.0% | |
| TAATTTCGGTAATTGCTTGG+TGG | + | chr1.3:50125838-50125857 | MS.gene036116:intron | 35.0% | |
| TACACATTGAAATTTCCTGC+TGG | + | chr1.3:50126817-50126836 | MS.gene036116:CDS | 35.0% | |
| TACTGTAGAAACAGGACATT+AGG | - | chr1.3:50125329-50125348 | None:intergenic | 35.0% | |
| TCAAATGAAAGGATGTGTGA+AGG | + | chr1.3:50126616-50126635 | MS.gene036116:CDS | 35.0% | |
| TCAATGATGCAACTTGCATT+TGG | + | chr1.3:50125449-50125468 | MS.gene036116:intron | 35.0% | |
| TCACACATCCTTTCATTTGA+AGG | - | chr1.3:50126616-50126635 | None:intergenic | 35.0% | |
| TCCTAATTTCGGTAATTGCT+TGG | + | chr1.3:50125835-50125854 | MS.gene036116:intron | 35.0% | |
| TCTATTCGTGATCACACATT+AGG | + | chr1.3:50126340-50126359 | MS.gene036116:CDS | 35.0% | |
| TTAACTCCTTAATACGGTCT+TGG | - | chr1.3:50127368-50127387 | None:intergenic | 35.0% | |
| ! | AACGATGAGACATTTTTGTC+TGG | - | chr1.3:50126676-50126695 | None:intergenic | 35.0% |
| ! | AAGATTTGAAGGCGTGTAAT+TGG | + | chr1.3:50125483-50125502 | MS.gene036116:intron | 35.0% |
| ! | CATCATAGTTTGAGTTTGTC+AGG | + | chr1.3:50127186-50127205 | MS.gene036116:CDS | 35.0% |
| ! | CCTACAACACTTTTACAATG+AGG | + | chr1.3:50128217-50128236 | MS.gene036116:intron | 35.0% |
| ! | GATTCATGATAATGAGCGTA+AGG | - | chr1.3:50128524-50128543 | None:intergenic | 35.0% |
| ! | TATGAGTTACATGAAGCACT+TGG | + | chr1.3:50126841-50126860 | MS.gene036116:CDS | 35.0% |
| ! | TCAGCTTCTACATTTTCTGA+TGG | - | chr1.3:50126748-50126767 | None:intergenic | 35.0% |
| ! | TTACTCTCTTTGAGAAAACC+TGG | - | chr1.3:50126868-50126887 | None:intergenic | 35.0% |
| ! | TTTTCTAATCCTGTCTCAGT+AGG | + | chr1.3:50127435-50127454 | MS.gene036116:intron | 35.0% |
| !! | AATGTCCTGTTTCTACAGTA+TGG | + | chr1.3:50125329-50125348 | MS.gene036116:intron | 35.0% |
| !! | ATTGACTTTTGAATCTCGTC+CGG | + | chr1.3:50126963-50126982 | MS.gene036116:CDS | 35.0% |
| !! | CCTCATTGTAAAAGTGTTGT+AGG | - | chr1.3:50128220-50128239 | None:intergenic | 35.0% |
| !! | CTGTTGTTGTTGATAATCAG+AGG | - | chr1.3:50128337-50128356 | None:intergenic | 35.0% |
| !!! | TATTTTGATTGGACGGTACA+AGG | + | chr1.3:50126889-50126908 | MS.gene036116:CDS | 35.0% |
| AAAACAGCAAAAAGAGGGCT+AGG | + | chr1.3:50127298-50127317 | MS.gene036116:CDS | 40.0% | |
| AAACCTTCAGCCACAAGAAT+TGG | - | chr1.3:50127494-50127513 | None:intergenic | 40.0% | |
| AAATGAAATTCCAGCTACCC+TGG | - | chr1.3:50127916-50127935 | None:intergenic | 40.0% | |
| AACAACAACAGGGTTCAAGT+TGG | + | chr1.3:50128346-50128365 | MS.gene036116:CDS | 40.0% | |
| AACACACAGAAAACCATGAC+GGG | + | chr1.3:50126397-50126416 | MS.gene036116:CDS | 40.0% | |
| AATGAAATTCCAGCTACCCT+GGG | - | chr1.3:50127915-50127934 | None:intergenic | 40.0% | |
| ACTGATCCAAGACCGTATTA+AGG | + | chr1.3:50127359-50127378 | MS.gene036116:CDS | 40.0% | |
| ACTGCTTCCAAAAGATGTTC+CGG | - | chr1.3:50126985-50127004 | None:intergenic | 40.0% | |
| AGGATCCTCACCTTAAAAGA+TGG | - | chr1.3:50125423-50125442 | None:intergenic | 40.0% | |
| AGGGTAGCTGGAATTTCATT+TGG | + | chr1.3:50127915-50127934 | MS.gene036116:intron | 40.0% | |
| ATCATTTCCTACATCAGTGC+AGG | + | chr1.3:50127053-50127072 | MS.gene036116:CDS | 40.0% | |
| CATGTATATTCGTTAGGGGA+AGG | + | chr1.3:50125230-50125249 | MS.gene036116:CDS | 40.0% | |
| CATTTGCCTGTCAACATGTA+AGG | - | chr1.3:50126106-50126125 | None:intergenic | 40.0% | |
| CTAATGTTCATCAAGGAACC+TGG | - | chr1.3:50127849-50127868 | None:intergenic | 40.0% | |
| CTGTTACTGGAAAACATCAG+TGG | + | chr1.3:50125364-50125383 | MS.gene036116:CDS | 40.0% | |
| CTTGAAATTGACAGCGATCA+AGG | + | chr1.3:50126523-50126542 | MS.gene036116:CDS | 40.0% | |
| GCAGAGAATACGAAACAAGT+AGG | + | chr1.3:50126583-50126602 | MS.gene036116:CDS | 40.0% | |
| GCATTCACAGATGACAGAAA+AGG | - | chr1.3:50126270-50126289 | None:intergenic | 40.0% | |
| GGTATCCTCGTAAAAAGACT+CGG | - | chr1.3:50126794-50126813 | None:intergenic | 40.0% | |
| TCATGTAACTCATAACCAGC+AGG | - | chr1.3:50126835-50126854 | None:intergenic | 40.0% | |
| TCCAACCATACTGTAGAAAC+AGG | - | chr1.3:50125337-50125356 | None:intergenic | 40.0% | |
| TCGCAACAGATAATCCTAGA+GGG | - | chr1.3:50125199-50125218 | None:intergenic | 40.0% | |
| TGTGAATGTTGTTGCCAATG+CGG | + | chr1.3:50125686-50125705 | MS.gene036116:intron | 40.0% | |
| TTCGCAACAGATAATCCTAG+AGG | - | chr1.3:50125200-50125219 | None:intergenic | 40.0% | |
| TTTCTACAGTATGGTTGGAC+AGG | + | chr1.3:50125338-50125357 | MS.gene036116:intron | 40.0% | |
| TTTCTGTCATCTGTGAATGC+AGG | + | chr1.3:50126270-50126289 | MS.gene036116:intron | 40.0% | |
| ! | AATAGCTTTTCCCAGGACAT+TGG | - | chr1.3:50126450-50126469 | None:intergenic | 40.0% |
| ! | ACAACAACAGGGTTCAAGTT+GGG | + | chr1.3:50128347-50128366 | MS.gene036116:CDS | 40.0% |
| ! | ATAGCTTTTCCCAGGACATT+GGG | - | chr1.3:50126449-50126468 | None:intergenic | 40.0% |
| ! | ATGTAAGGCTTGGTAAGTCA+GGG | - | chr1.3:50126091-50126110 | None:intergenic | 40.0% |
| ! | GAAGACATGCATGTGTTTTG+TGG | + | chr1.3:50128651-50128670 | MS.gene036116:CDS | 40.0% |
| ! | GAGTGGAATTAGGCTTTGAT+CGG | + | chr1.3:50127788-50127807 | MS.gene036116:intron | 40.0% |
| ! | GATTCTCTTTTGAACCGCAT+TGG | - | chr1.3:50125703-50125722 | None:intergenic | 40.0% |
| ! | GATTTTTCACATGACCCTCT+AGG | + | chr1.3:50125182-50125201 | MS.gene036116:CDS | 40.0% |
| ! | GTTAAGCTTTGTGAATAGCC+AGG | + | chr1.3:50127828-50127847 | MS.gene036116:intron | 40.0% |
| ! | TGACATCGATTGAAGCAAGA+TGG | - | chr1.3:50126551-50126570 | None:intergenic | 40.0% |
| ! | TTAAGAGAACTGGTGCCAAA+CGG | + | chr1.3:50127384-50127403 | MS.gene036116:CDS | 40.0% |
| ! | TTCACGCTTTGGATTTGACT+AGG | - | chr1.3:50126373-50126392 | None:intergenic | 40.0% |
| ! | TTGGGACTGACGATTTTGAA+CGG | + | chr1.3:50128607-50128626 | MS.gene036116:CDS | 40.0% |
| !! | ACGTCTTATTGGCTTTGAGA+TGG | + | chr1.3:50127644-50127663 | MS.gene036116:intron | 40.0% |
| !! | GTGCAGTATTGATTCACTGT+TGG | + | chr1.3:50127532-50127551 | MS.gene036116:intron | 40.0% |
| !! | TCCTGTTTCTACAGTATGGT+TGG | + | chr1.3:50125333-50125352 | MS.gene036116:intron | 40.0% |
| !!! | CTAGTCCATCTTTTAAGGTG+AGG | + | chr1.3:50125415-50125434 | MS.gene036116:intron | 40.0% |
| AAACCAAAGCCTACTGAGAC+AGG | - | chr1.3:50127447-50127466 | None:intergenic | 45.0% | |
| AAAGTTGTAGGCCTAGACCA+AGG | + | chr1.3:50127328-50127347 | MS.gene036116:CDS | 45.0% | |
| AACTGCGCAGTTGCATCATA+TGG | + | chr1.3:50128293-50128312 | MS.gene036116:intron | 45.0% | |
| AACTGGTTACTACACGAGCT+AGG | - | chr1.3:50127255-50127274 | None:intergenic | 45.0% | |
| AAGTTGTAGGCCTAGACCAA+GGG | + | chr1.3:50127329-50127348 | MS.gene036116:CDS | 45.0% | |
| AATCCTGTCTCAGTAGGCTT+TGG | + | chr1.3:50127441-50127460 | MS.gene036116:intron | 45.0% | |
| AATTTCAAGCCCCTCGTGTT+TGG | - | chr1.3:50126512-50126531 | None:intergenic | 45.0% | |
| ACCAAGCCTTACATGTTGAC+AGG | + | chr1.3:50126097-50126116 | MS.gene036116:intron | 45.0% | |
| ACCTATGCCATTGTAACCCA+GGG | + | chr1.3:50127896-50127915 | MS.gene036116:intron | 45.0% | |
| ACCTTGGAGCAGATCTATGT+TGG | + | chr1.3:50125158-50125177 | MS.gene036116:CDS | 45.0% | |
| ATCAAGTGTTTCACCCGTCA+TGG | - | chr1.3:50126413-50126432 | None:intergenic | 45.0% | |
| ATTGATGTGGCCAAACACGA+GGG | + | chr1.3:50126499-50126518 | MS.gene036116:CDS | 45.0% | |
| CAAGATACCTTTGCTCCGTT+TGG | - | chr1.3:50127402-50127421 | None:intergenic | 45.0% | |
| CAGCATGCTTAGTTACGCTT+TGG | - | chr1.3:50127586-50127605 | None:intergenic | 45.0% | |
| CCACTTGGAGTTGTTCAACT+TGG | + | chr1.3:50125594-50125613 | MS.gene036116:CDS | 45.0% | |
| CGTGTAGTAACCAGTTTGAG+AGG | + | chr1.3:50127259-50127278 | MS.gene036116:CDS | 45.0% | |
| GACGGGTGAAACACTTGATA+TGG | + | chr1.3:50126414-50126433 | MS.gene036116:CDS | 45.0% | |
| GTGTGTTACGTTTCACGCTT+TGG | - | chr1.3:50126384-50126403 | None:intergenic | 45.0% | |
| GTTACAATGGCATAGGTGTG+AGG | - | chr1.3:50127893-50127912 | None:intergenic | 45.0% | |
| GTTCAGAAGACCTCTCAAAC+TGG | - | chr1.3:50127272-50127291 | None:intergenic | 45.0% | |
| GTTCCAATTCTTGTGGCTGA+AGG | + | chr1.3:50127488-50127507 | MS.gene036116:intron | 45.0% | |
| TACATCAGTGCAGGACACAA+TGG | + | chr1.3:50127062-50127081 | MS.gene036116:CDS | 45.0% | |
| TATTGATGTGGCCAAACACG+AGG | + | chr1.3:50126498-50126517 | MS.gene036116:CDS | 45.0% | |
| TCCAACATAGATCTGCTCCA+AGG | - | chr1.3:50125162-50125181 | None:intergenic | 45.0% | |
| TGTCATCTGTGAATGCAGGT+TGG | + | chr1.3:50126274-50126293 | MS.gene036116:intron | 45.0% | |
| TTGAGTTTGTCAGGGATCTG+CGG | + | chr1.3:50127195-50127214 | MS.gene036116:CDS | 45.0% | |
| ! | ATCTCGTCCGGAACATCTTT+TGG | + | chr1.3:50126975-50126994 | MS.gene036116:CDS | 45.0% |
| ! | ATTGTGTCCTGCACTGATGT+AGG | - | chr1.3:50127063-50127082 | None:intergenic | 45.0% |
| ! | CATGTAAGGCTTGGTAAGTC+AGG | - | chr1.3:50126092-50126111 | None:intergenic | 45.0% |
| ! | CCAAGTTGAACAACTCCAAG+TGG | - | chr1.3:50125597-50125616 | None:intergenic | 45.0% |
| ! | CGCTTTGGATTTGACTAGGA+AGG | - | chr1.3:50126369-50126388 | None:intergenic | 45.0% |
| ! | GGAGATGAATAGCTTTTCCC+AGG | - | chr1.3:50126457-50126476 | None:intergenic | 45.0% |
| ! | TCAGACCGAGTCTTTTTACG+AGG | + | chr1.3:50126786-50126805 | MS.gene036116:CDS | 45.0% |
| ! | TTACATGAAGCACTTGGACC+AGG | + | chr1.3:50126847-50126866 | MS.gene036116:CDS | 45.0% |
| !! | AATGCAGGTTGGTGAAGACA+TGG | + | chr1.3:50126285-50126304 | MS.gene036116:intron | 45.0% |
| !! | ATGCAGGTTGGTGAAGACAT+GGG | + | chr1.3:50126286-50126305 | MS.gene036116:intron | 45.0% |
| !! | CTTGGTGGTGATTGAAGCAT+TGG | + | chr1.3:50125853-50125872 | MS.gene036116:intron | 45.0% |
| !! | GGAACATCTTTTGGAAGCAG+TGG | + | chr1.3:50126984-50127003 | MS.gene036116:CDS | 45.0% |
| ACCCTGGGTTACAATGGCAT+AGG | - | chr1.3:50127900-50127919 | None:intergenic | 50.0% | |
| AGCAGAAGCCGTAAGAAGCT+TGG | + | chr1.3:50128588-50128607 | MS.gene036116:CDS | 50.0% | |
| AGTTGTCTGTCCCTTGGTCT+AGG | - | chr1.3:50127342-50127361 | None:intergenic | 50.0% | |
| CACCTATGCCATTGTAACCC+AGG | + | chr1.3:50127895-50127914 | MS.gene036116:intron | 50.0% | |
| CATGCTACAGATGCTCTGTG+AGG | + | chr1.3:50128543-50128562 | MS.gene036116:intron | 50.0% | |
| CGTCAGTCCCAAGCTTCTTA+CGG | - | chr1.3:50128599-50128618 | None:intergenic | 50.0% | |
| CTAGGCCAGGTGAAAGTTGT+AGG | + | chr1.3:50127316-50127335 | MS.gene036116:CDS | 50.0% | |
| CTAGGCCTACAACTTTCACC+TGG | - | chr1.3:50127324-50127343 | None:intergenic | 50.0% | |
| GCAGAAGCCGTAAGAAGCTT+GGG | + | chr1.3:50128589-50128608 | MS.gene036116:CDS | 50.0% | |
| GCCTGTCAACATGTAAGGCT+TGG | - | chr1.3:50126101-50126120 | None:intergenic | 50.0% | |
| GTCGTAGCAGTACTACCACT+TGG | + | chr1.3:50125579-50125598 | MS.gene036116:CDS | 50.0% | |
| GTTGGACAGGTAGCTGTTAC+TGG | + | chr1.3:50125351-50125370 | MS.gene036116:CDS | 50.0% | |
| TGATGCAACTGCGCAGTTGT+AGG | - | chr1.3:50128291-50128310 | None:intergenic | 50.0% | |
| TGGATCAGTTGTCTGTCCCT+TGG | - | chr1.3:50127348-50127367 | None:intergenic | 50.0% | |
| TTGATGTGGCCAAACACGAG+GGG | + | chr1.3:50126500-50126519 | MS.gene036116:CDS | 50.0% | |
| ! | CTTTTCCCAGGACATTGGGA+GGG | - | chr1.3:50126445-50126464 | None:intergenic | 50.0% |
| ! | GAATGGGCAGATGCTTGTTG+AGG | + | chr1.3:50128428-50128447 | MS.gene036116:CDS | 50.0% |
| !! | ACAGGGTTCAAGTTGGGCAA+TGG | + | chr1.3:50128353-50128372 | MS.gene036116:CDS | 50.0% |
| !! | TCAAGTTGGGCAATGGAGGT+AGG | + | chr1.3:50128360-50128379 | MS.gene036116:CDS | 50.0% |
| !! | TGCAGGTTGGTGAAGACATG+GGG | + | chr1.3:50126287-50126306 | MS.gene036116:intron | 50.0% |
| AACGGTGCAAGTGAAGCTCG+TGG | + | chr1.3:50128625-50128644 | MS.gene036116:CDS | 55.0% | |
| AGCAAAAAGAGGGCTAGGCC+AGG | + | chr1.3:50127303-50127322 | MS.gene036116:CDS | 55.0% | |
| AGTTGGGCAATGGAGGTAGG+AGG | + | chr1.3:50128363-50128382 | MS.gene036116:CDS | 55.0% | |
| CCAGCTACCCTGGGTTACAA+TGG | - | chr1.3:50127906-50127925 | None:intergenic | 55.0% | |
| CCATTGTAACCCAGGGTAGC+TGG | + | chr1.3:50127903-50127922 | MS.gene036116:intron | 55.0% | |
| TAACGCCCTCCCAATGTCCT+GGG | + | chr1.3:50126437-50126456 | MS.gene036116:CDS | 55.0% | |
| ! | ACTGGTGCCAAACGGAGCAA+AGG | + | chr1.3:50127392-50127411 | MS.gene036116:CDS | 55.0% |
| ! | GCTTTTCCCAGGACATTGGG+AGG | - | chr1.3:50126446-50126465 | None:intergenic | 55.0% |
| !! | GGGTTCAAGTTGGGCAATGG+AGG | + | chr1.3:50128356-50128375 | MS.gene036116:CDS | 55.0% |
| GTAACGCCCTCCCAATGTCC+TGG | + | chr1.3:50126436-50126455 | MS.gene036116:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 50125143 | 50128678 | 50125143 | ID=MS.gene036116 |
| chr1.3 | mRNA | 50125143 | 50128678 | 50125143 | ID=MS.gene036116.t1;Parent=MS.gene036116 |
| chr1.3 | exon | 50125143 | 50125252 | 50125143 | ID=MS.gene036116.t1.exon1;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50125143 | 50125252 | 50125143 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50125347 | 50125431 | 50125347 | ID=MS.gene036116.t1.exon2;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50125347 | 50125431 | 50125347 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50125570 | 50125629 | 50125570 | ID=MS.gene036116.t1.exon3;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50125570 | 50125629 | 50125570 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50126292 | 50127413 | 50126292 | ID=MS.gene036116.t1.exon4;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50126292 | 50127413 | 50126292 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50127533 | 50127640 | 50127533 | ID=MS.gene036116.t1.exon5;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50127533 | 50127640 | 50127533 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50128303 | 50128449 | 50128303 | ID=MS.gene036116.t1.exon6;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50128303 | 50128449 | 50128303 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| chr1.3 | exon | 50128553 | 50128678 | 50128553 | ID=MS.gene036116.t1.exon7;Parent=MS.gene036116.t1 |
| chr1.3 | CDS | 50128553 | 50128678 | 50128553 | ID=cds.MS.gene036116.t1;Parent=MS.gene036116.t1 |
| Gene Sequence |
| Protein sequence |
