Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036119.t1 | XP_013468526.1 | 94.1 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.00E+00 | 1250.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036119.t1 | P0C7P8 | 41.7 | 751 | 331 | 22 | 1 | 663 | 1 | 732 | 8.2e-120 | 432.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036119.t1 | A0A072VMB0 | 94.1 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.0e+00 | 1250.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036119 | MS.gene018723 | PPI |
| MS.gene50611 | MS.gene036119 | PPI |
| MS.gene97017 | MS.gene036119 | PPI |
| MS.gene020354 | MS.gene036119 | PPI |
| MS.gene018723 | MS.gene036119 | PPI |
| MS.gene49313 | MS.gene036119 | PPI |
| MS.gene036116 | MS.gene036119 | PPI |
| MS.gene23501 | MS.gene036119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036119.t1 | MTR_1g070180 | 94.144 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1304 |
| MS.gene036119.t1 | MTR_7g096650 | 57.389 | 697 | 231 | 8 | 1 | 665 | 1 | 663 | 0.0 | 704 |
| MS.gene036119.t1 | MTR_7g096650 | 56.223 | 683 | 241 | 8 | 1 | 665 | 1 | 643 | 0.0 | 693 |
| MS.gene036119.t1 | MTR_7g096650 | 57.669 | 489 | 172 | 5 | 178 | 665 | 13 | 467 | 0.0 | 526 |
| MS.gene036119.t1 | MTR_7g063470 | 28.870 | 717 | 389 | 27 | 2 | 650 | 3 | 666 | 1.68e-66 | 231 |
| MS.gene036119.t1 | MTR_4g051565 | 54.124 | 194 | 83 | 3 | 466 | 659 | 619 | 806 | 5.78e-56 | 204 |
| MS.gene036119.t1 | MTR_4g051565 | 34.454 | 119 | 63 | 3 | 87 | 192 | 11 | 127 | 1.03e-11 | 68.6 |
| MS.gene036119.t1 | MTR_7g063470 | 28.443 | 668 | 372 | 25 | 36 | 650 | 2 | 616 | 2.22e-55 | 199 |
| MS.gene036119.t1 | MTR_4g051565 | 54.124 | 194 | 83 | 3 | 466 | 659 | 707 | 894 | 2.47e-55 | 203 |
| MS.gene036119.t1 | MTR_4g051565 | 31.050 | 219 | 120 | 7 | 1 | 192 | 1 | 215 | 1.41e-20 | 97.4 |
| MS.gene036119.t1 | MTR_2g087295 | 52.062 | 194 | 87 | 3 | 466 | 659 | 668 | 855 | 9.67e-54 | 198 |
| MS.gene036119.t1 | MTR_2g087295 | 29.864 | 221 | 119 | 7 | 1 | 192 | 1 | 214 | 1.55e-20 | 97.1 |
| MS.gene036119.t1 | MTR_1g077640 | 44.086 | 186 | 97 | 3 | 482 | 664 | 573 | 754 | 2.62e-42 | 164 |
| MS.gene036119.t1 | MTR_1g077640 | 32.515 | 163 | 75 | 4 | 1 | 155 | 5 | 140 | 9.34e-15 | 78.6 |
| MS.gene036119.t1 | MTR_2g078750 | 27.419 | 186 | 84 | 7 | 5 | 155 | 20 | 189 | 5.24e-13 | 72.0 |
| MS.gene036119.t1 | MTR_5g034840 | 30.049 | 203 | 84 | 8 | 5 | 155 | 14 | 210 | 8.19e-13 | 70.9 |
| MS.gene036119.t1 | MTR_1g018810 | 28.426 | 197 | 78 | 9 | 5 | 152 | 12 | 194 | 6.64e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036119.t1 | AT2G31280 | 40.613 | 751 | 322 | 21 | 1 | 662 | 1 | 716 | 6.23e-146 | 441 |
| MS.gene036119.t1 | AT2G31280 | 39.714 | 768 | 322 | 22 | 1 | 662 | 1 | 733 | 1.17e-141 | 431 |
| MS.gene036119.t1 | AT2G31280 | 39.087 | 701 | 313 | 20 | 7 | 638 | 33 | 688 | 1.18e-119 | 374 |
| MS.gene036119.t1 | AT1G06150 | 49.757 | 412 | 180 | 10 | 261 | 663 | 341 | 734 | 1.62e-101 | 326 |
| MS.gene036119.t1 | AT1G06150 | 49.412 | 170 | 64 | 3 | 1 | 157 | 1 | 161 | 4.81e-40 | 157 |
| MS.gene036119.t1 | AT1G06150 | 49.757 | 412 | 178 | 11 | 261 | 663 | 341 | 732 | 1.07e-99 | 322 |
| MS.gene036119.t1 | AT1G06150 | 49.412 | 170 | 64 | 3 | 1 | 157 | 1 | 161 | 5.31e-40 | 157 |
| MS.gene036119.t1 | AT2G27230 | 39.744 | 312 | 157 | 8 | 352 | 659 | 336 | 620 | 6.90e-51 | 187 |
| MS.gene036119.t1 | AT2G27230 | 30.769 | 208 | 114 | 6 | 1 | 190 | 1 | 196 | 9.80e-21 | 97.4 |
| MS.gene036119.t1 | AT2G27230 | 39.744 | 312 | 157 | 8 | 352 | 659 | 336 | 620 | 6.90e-51 | 187 |
| MS.gene036119.t1 | AT2G27230 | 30.769 | 208 | 114 | 6 | 1 | 190 | 1 | 196 | 9.80e-21 | 97.4 |
| MS.gene036119.t1 | AT1G64625 | 46.196 | 184 | 82 | 2 | 476 | 659 | 327 | 493 | 9.72e-46 | 170 |
| MS.gene036119.t1 | AT1G64625 | 33.571 | 140 | 59 | 3 | 1 | 140 | 1 | 106 | 1.82e-14 | 77.0 |
| MS.gene036119.t1 | AT1G64625 | 46.196 | 184 | 82 | 2 | 476 | 659 | 351 | 517 | 1.78e-45 | 170 |
| MS.gene036119.t1 | AT1G64625 | 32.484 | 157 | 62 | 5 | 1 | 140 | 1 | 130 | 8.20e-13 | 72.0 |
| MS.gene036119.t1 | AT1G64625 | 46.196 | 184 | 82 | 2 | 476 | 659 | 341 | 507 | 1.78e-45 | 170 |
| MS.gene036119.t1 | AT1G64625 | 33.333 | 150 | 60 | 4 | 1 | 140 | 1 | 120 | 6.34e-14 | 75.5 |
| MS.gene036119.t1 | AT1G64625 | 56.977 | 86 | 32 | 1 | 476 | 561 | 341 | 421 | 3.18e-24 | 106 |
| MS.gene036119.t1 | AT1G64625 | 33.333 | 150 | 60 | 4 | 1 | 140 | 1 | 120 | 2.25e-14 | 76.3 |
| MS.gene036119.t1 | AT3G15240 | 28.191 | 188 | 85 | 6 | 5 | 155 | 34 | 208 | 6.32e-14 | 74.3 |
| MS.gene036119.t1 | AT5G53900 | 26.009 | 223 | 114 | 8 | 5 | 192 | 21 | 227 | 1.52e-13 | 73.2 |
Find 128 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTCAGCATACTTTATTTA+AGG | 0.129093 | 1.3:-50133550 | None:intergenic |
| TGGGAAGAATCACAATTATC+AGG | 0.237556 | 1.3:-50133047 | None:intergenic |
| TGATGGACTTGTTAAATCTT+TGG | 0.262539 | 1.3:-50134659 | None:intergenic |
| ATCTCGTCCGGAACATCTTT+TGG | 0.269914 | 1.3:+50134906 | MS.gene036119:CDS |
| CTACAATATCATTATTACTA+TGG | 0.303371 | 1.3:-50134951 | None:intergenic |
| TATGTACATTTCTGTTGTTT+TGG | 0.304838 | 1.3:-50136809 | None:intergenic |
| TCTTAGTAGTTGATGCAAAT+TGG | 0.311091 | 1.3:-50132266 | None:intergenic |
| CATCATAGTTTGAGTTTGTC+AGG | 0.324738 | 1.3:+50135117 | MS.gene036119:CDS |
| ATTGGAAGTATGCTATCTTT+TGG | 0.326772 | 1.3:+50132308 | MS.gene036119:CDS |
| CTTCTGCTATCTCAAGAAAA+TGG | 0.337897 | 1.3:-50136505 | None:intergenic |
| AATTTCAAGCCCCTCGTGTT+TGG | 0.340965 | 1.3:-50134440 | None:intergenic |
| GTTGGACAGGTAGCTGTTAC+TGG | 0.341561 | 1.3:+50133282 | MS.gene036119:CDS |
| CTCTGATTATCAACAACAAC+AGG | 0.341637 | 1.3:+50136267 | MS.gene036119:CDS |
| AGCCTTCTGAATTAATATTT+CGG | 0.342951 | 1.3:-50135053 | None:intergenic |
| TCTATTCGTGATCACACATT+AGG | 0.346800 | 1.3:+50134271 | MS.gene036119:CDS |
| TACATAGACTGGACATCTTA+TGG | 0.354256 | 1.3:+50136826 | MS.gene036119:CDS |
| GTGTGTTACGTTTCACGCTT+TGG | 0.365954 | 1.3:-50134312 | None:intergenic |
| GACGGGTGAAACACTTGATA+TGG | 0.366173 | 1.3:+50134345 | MS.gene036119:CDS |
| TCACACATCCTTTCATTTGA+AGG | 0.372706 | 1.3:-50134544 | None:intergenic |
| CAAGATACCTTTGCTCCGTT+TGG | 0.374894 | 1.3:-50135330 | None:intergenic |
| CCGTATCATGTATATTCGTT+AGG | 0.377911 | 1.3:+50133155 | MS.gene036119:CDS |
| AGTTGTCTGTCCCTTGGTCT+AGG | 0.381960 | 1.3:-50135270 | None:intergenic |
| CAGCATGCTTAGTTACGCTT+TGG | 0.384514 | 1.3:-50135513 | None:intergenic |
| TCATGAATGTGTGGTGCTCT+TGG | 0.391843 | 1.3:-50136871 | None:intergenic |
| GCCTTTGTTTGGATACTGAT+TGG | 0.393403 | 1.3:+50132290 | MS.gene036119:CDS |
| ACTGATCCAAGACCGTATTA+AGG | 0.395166 | 1.3:+50135290 | MS.gene036119:CDS |
| ACTACTAAGAAGCCTTTGTT+TGG | 0.398957 | 1.3:+50132279 | MS.gene036119:CDS |
| GTAGAAAATCTTAGTAAGAA+TGG | 0.406604 | 1.3:+50136343 | MS.gene036119:CDS |
| TCATTATGAACAGAAACTTC+AGG | 0.416026 | 1.3:-50135030 | None:intergenic |
| CGTATCATGTATATTCGTTA+GGG | 0.420977 | 1.3:+50133156 | MS.gene036119:CDS |
| TTAACTCCTTAATACGGTCT+TGG | 0.421661 | 1.3:-50135296 | None:intergenic |
| CCACTTGGAGTTGTTCAACT+TGG | 0.421728 | 1.3:+50133525 | MS.gene036119:CDS |
| AGCAGAAGCCGTAAGAAGCT+TGG | 0.422035 | 1.3:+50136520 | MS.gene036119:CDS |
| AACTGCGCAGTTGCATCATA+TGG | 0.422500 | 1.3:+50136225 | MS.gene036119:intron |
| ATTATTACTATGGCAAACTT+TGG | 0.428962 | 1.3:-50134941 | None:intergenic |
| CGTCAGTCCCAAGCTTCTTA+CGG | 0.431906 | 1.3:-50136528 | None:intergenic |
| TGGATCAGTTGTCTGTCCCT+TGG | 0.434072 | 1.3:-50135276 | None:intergenic |
| CTTGAAATTGACAGCGATCA+AGG | 0.439876 | 1.3:+50134454 | MS.gene036119:CDS |
| TAGAAAATCTTAGTAAGAAT+GGG | 0.442335 | 1.3:+50136344 | MS.gene036119:CDS |
| GTTCTGAGAGCACATACTTT+GGG | 0.443847 | 1.3:-50133066 | None:intergenic |
| GACGAGATTCAAAAGTCAAT+TGG | 0.450977 | 1.3:-50134891 | None:intergenic |
| CTAGGCCAGGTGAAAGTTGT+AGG | 0.452487 | 1.3:+50135247 | MS.gene036119:CDS |
| TGTTCTGAGAGCACATACTT+TGG | 0.455292 | 1.3:-50133067 | None:intergenic |
| CGCTTTGGATTTGACTAGGA+AGG | 0.470186 | 1.3:-50134297 | None:intergenic |
| GTTCTCTTAACTCCTTAATA+CGG | 0.473917 | 1.3:-50135302 | None:intergenic |
| GTTCAGAAGACCTCTCAAAC+TGG | 0.474775 | 1.3:-50135200 | None:intergenic |
| CAACAGAAATGTACATAGAC+TGG | 0.476550 | 1.3:+50136815 | MS.gene036119:CDS |
| GCAGAAGCCGTAAGAAGCTT+GGG | 0.478373 | 1.3:+50136521 | MS.gene036119:CDS |
| AGGAAATTTCAATGTGTATG+AGG | 0.478639 | 1.3:-50134743 | None:intergenic |
| CATATGGAAAATGACATTCA+TGG | 0.481714 | 1.3:+50136241 | MS.gene036119:CDS |
| TCCTGTTTCTACAGTATGGT+TGG | 0.484140 | 1.3:+50133264 | MS.gene036119:intron |
| TTTCTACAGTATGGTTGGAC+AGG | 0.486471 | 1.3:+50133269 | MS.gene036119:intron |
| TATTAAGGAGTTAAGAGAAC+TGG | 0.491639 | 1.3:+50135305 | MS.gene036119:CDS |
| AGGATCCTCACCTTAAAAGA+TGG | 0.491951 | 1.3:-50133351 | None:intergenic |
| GTAACGCCCTCCCAATGTCC+TGG | 0.494376 | 1.3:+50134367 | MS.gene036119:CDS |
| ACAACAACAGGGTTCAAGTT+GGG | 0.495964 | 1.3:+50136279 | MS.gene036119:CDS |
| ATGTGTGAAGGGAACAATAA+TGG | 0.497231 | 1.3:+50134559 | MS.gene036119:CDS |
| TACACATTGAAATTTCCTGC+TGG | 0.505845 | 1.3:+50134748 | MS.gene036119:CDS |
| TGACATCGATTGAAGCAAGA+TGG | 0.514120 | 1.3:-50134479 | None:intergenic |
| ATCAAGTGTTTCACCCGTCA+TGG | 0.518290 | 1.3:-50134341 | None:intergenic |
| TTACTCTCTTTGAGAAAACC+TGG | 0.521989 | 1.3:-50134796 | None:intergenic |
| CTGACAAACTCAAACTATGA+TGG | 0.527690 | 1.3:-50135116 | None:intergenic |
| ATGTATATTCGTTAGGGGAA+GGG | 0.529135 | 1.3:+50133162 | MS.gene036119:CDS |
| CCTAACGAATATACATGATA+CGG | 0.532424 | 1.3:-50133155 | None:intergenic |
| ATCATTTCCTACATCAGTGC+AGG | 0.536203 | 1.3:+50134984 | MS.gene036119:CDS |
| GTGCAGTATTGATTCACTGT+TGG | 0.539514 | 1.3:+50135462 | MS.gene036119:intron |
| ACTGCTTCCAAAAGATGTTC+CGG | 0.539659 | 1.3:-50134913 | None:intergenic |
| GGGAAGAATCACAATTATCA+GGG | 0.539821 | 1.3:-50133046 | None:intergenic |
| TAATGATATTGTAGATAATG+AGG | 0.540266 | 1.3:+50134960 | MS.gene036119:CDS |
| ACAGGGTTCAAGTTGGGCAA+TGG | 0.540297 | 1.3:+50136285 | MS.gene036119:CDS |
| ACCTTGGAGCAGATCTATGT+TGG | 0.541880 | 1.3:+50133089 | MS.gene036119:CDS |
| CATGTATATTCGTTAGGGGA+AGG | 0.541965 | 1.3:+50133161 | MS.gene036119:CDS |
| GCAGAGAATACGAAACAAGT+AGG | 0.544022 | 1.3:+50134514 | MS.gene036119:CDS |
| TCAACCATCTCATATTAAAG+AGG | 0.552455 | 1.3:+50135086 | MS.gene036119:CDS |
| AACAACAACAGGGTTCAAGT+TGG | 0.556005 | 1.3:+50136278 | MS.gene036119:CDS |
| ATCATAGTTTGAGTTTGTCA+GGG | 0.556500 | 1.3:+50135118 | MS.gene036119:CDS |
| ATATCCTCTTTAATATGAGA+TGG | 0.557881 | 1.3:-50135090 | None:intergenic |
| TTACATGAAGCACTTGGACC+AGG | 0.559643 | 1.3:+50134778 | MS.gene036119:CDS |
| GACCGAAATATTAATTCAGA+AGG | 0.563885 | 1.3:+50135051 | MS.gene036119:CDS |
| CAAATGAAAGGATGTGTGAA+GGG | 0.564926 | 1.3:+50134548 | MS.gene036119:CDS |
| TCAAGTTGGGCAATGGAGGT+AGG | 0.566298 | 1.3:+50136292 | MS.gene036119:CDS |
| GGATGAAACCTTCAAATGAA+AGG | 0.568936 | 1.3:+50134536 | MS.gene036119:CDS |
| TCAGAAAATGACTATTGATG+TGG | 0.577639 | 1.3:+50134417 | MS.gene036119:CDS |
| TTGCTTGCAGGATCTTGACA+TGG | 0.580291 | 1.3:+50133003 | MS.gene036119:intron |
| TCATGTAACTCATAACCAGC+AGG | 0.580707 | 1.3:-50134763 | None:intergenic |
| CTAGGCCTACAACTTTCACC+TGG | 0.582898 | 1.3:-50135252 | None:intergenic |
| TTCACGCTTTGGATTTGACT+AGG | 0.583058 | 1.3:-50134301 | None:intergenic |
| AACACACAGAAAACCATGAC+GGG | 0.583428 | 1.3:+50134328 | MS.gene036119:CDS |
| GACTGCAATAATTGAACAAG+CGG | 0.583493 | 1.3:-50136849 | None:intergenic |
| GGGTTCAAGTTGGGCAATGG+AGG | 0.584395 | 1.3:+50136288 | MS.gene036119:CDS |
| TCAAATGAAAGGATGTGTGA+AGG | 0.588450 | 1.3:+50134547 | MS.gene036119:CDS |
| TAACGCCCTCCCAATGTCCT+GGG | 0.589847 | 1.3:+50134368 | MS.gene036119:CDS |
| CAGAGAATACGAAACAAGTA+GGG | 0.591572 | 1.3:+50134515 | MS.gene036119:CDS |
| CTGTTGTTGTTGATAATCAG+AGG | 0.593214 | 1.3:-50136266 | None:intergenic |
| TTAAGAGAACTGGTGCCAAA+CGG | 0.593259 | 1.3:+50135315 | MS.gene036119:CDS |
| ATTGTGTCCTGCACTGATGT+AGG | 0.598822 | 1.3:-50134991 | None:intergenic |
| ACTGGTGCCAAACGGAGCAA+AGG | 0.604316 | 1.3:+50135323 | MS.gene036119:CDS |
| TATGAGTTACATGAAGCACT+TGG | 0.610930 | 1.3:+50134772 | MS.gene036119:CDS |
| TATTGATGTGGCCAAACACG+AGG | 0.617153 | 1.3:+50134429 | MS.gene036119:CDS |
| TGCTTGCAGGATCTTGACAT+GGG | 0.618674 | 1.3:+50133004 | MS.gene036119:intron |
| TCCAATCAGTATCCAAACAA+AGG | 0.620757 | 1.3:-50132291 | None:intergenic |
| TTGAGTTTGTCAGGGATCTG+CGG | 0.621537 | 1.3:+50135126 | MS.gene036119:CDS |
| AAAGTTGTAGGCCTAGACCA+AGG | 0.627816 | 1.3:+50135259 | MS.gene036119:CDS |
| TACATCAGTGCAGGACACAA+TGG | 0.629927 | 1.3:+50134993 | MS.gene036119:CDS |
| AATGCAGGTTGGTGAAGACA+TGG | 0.636281 | 1.3:+50134216 | MS.gene036119:intron |
| AACTGGTTACTACACGAGCT+AGG | 0.639086 | 1.3:-50135183 | None:intergenic |
| GAATGGGCAGATGCTTGTTG+AGG | 0.640182 | 1.3:+50136360 | MS.gene036119:CDS |
| GTCGTAGCAGTACTACCACT+TGG | 0.641686 | 1.3:+50133510 | MS.gene036119:CDS |
| CTGTTACTGGAAAACATCAG+TGG | 0.641892 | 1.3:+50133295 | MS.gene036119:CDS |
| TCCAACATAGATCTGCTCCA+AGG | 0.643426 | 1.3:-50133090 | None:intergenic |
| AGTTGGGCAATGGAGGTAGG+AGG | 0.643833 | 1.3:+50136295 | MS.gene036119:CDS |
| CGTGTAGTAACCAGTTTGAG+AGG | 0.651078 | 1.3:+50135190 | MS.gene036119:CDS |
| AAGTTGTAGGCCTAGACCAA+GGG | 0.652681 | 1.3:+50135260 | MS.gene036119:CDS |
| TCGCAACAGATAATCCTAGA+GGG | 0.655424 | 1.3:-50133127 | None:intergenic |
| TTCGCAACAGATAATCCTAG+AGG | 0.664107 | 1.3:-50133128 | None:intergenic |
| TTGCAGGATCTTGACATGGG+AGG | 0.664946 | 1.3:+50133007 | MS.gene036119:intron |
| TAACACACAGAAAACCATGA+CGG | 0.666602 | 1.3:+50134327 | MS.gene036119:CDS |
| TGCAGGTTGGTGAAGACATG+GGG | 0.669819 | 1.3:+50134218 | MS.gene036119:intron |
| ATGCAGGTTGGTGAAGACAT+GGG | 0.672643 | 1.3:+50134217 | MS.gene036119:intron |
| ATTGATGTGGCCAAACACGA+GGG | 0.677054 | 1.3:+50134430 | MS.gene036119:CDS |
| AAACATTTATCATGAATGTG+TGG | 0.685784 | 1.3:-50136880 | None:intergenic |
| CCAAGTTGAACAACTCCAAG+TGG | 0.686515 | 1.3:-50133525 | None:intergenic |
| TTGATGTGGCCAAACACGAG+GGG | 0.694860 | 1.3:+50134431 | MS.gene036119:CDS |
| TATGTGCTCTCAGAACACCT+TGG | 0.696188 | 1.3:+50133073 | MS.gene036119:CDS |
| CATGCTACAGATGCTCTGTG+AGG | 0.715737 | 1.3:+50136475 | MS.gene036119:intron |
| GTATCATGTATATTCGTTAG+GGG | 0.726980 | 1.3:+50133157 | MS.gene036119:CDS |
| TCTGATTATCAACAACAACA+GGG | 0.741738 | 1.3:+50136268 | MS.gene036119:CDS |
| AACGGTGCAAGTGAAGCTCG+TGG | 0.750508 | 1.3:+50136557 | MS.gene036119:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATAAAGAATAA+TGG | - | chr1.3:50133656-50133675 | None:intergenic | 10.0% |
| !! | ATATTTGACATAAAATATAA+AGG | + | chr1.3:50133947-50133966 | MS.gene036119:intron | 10.0% |
| !! | ATTGATGTTTATAAAATTAA+GGG | - | chr1.3:50136052-50136071 | None:intergenic | 10.0% |
| !! | TATTGATGTTTATAAAATTA+AGG | - | chr1.3:50136053-50136072 | None:intergenic | 10.0% |
| !! | AAATTAGGAGATTATATAAA+TGG | - | chr1.3:50133755-50133774 | None:intergenic | 15.0% |
| !! | AAGAAATTTAAGCATTAAAA+GGG | - | chr1.3:50133591-50133610 | None:intergenic | 15.0% |
| !! | AATTAGGAGATTATATAAAT+GGG | - | chr1.3:50133754-50133773 | None:intergenic | 15.0% |
| !! | TTCTTAATTCAATATCTAAA+AGG | - | chr1.3:50132570-50132589 | None:intergenic | 15.0% |
| !! | TTTAGATATTGAATTAAGAA+GGG | + | chr1.3:50132570-50132589 | MS.gene036119:intron | 15.0% |
| !! | TTTATATAATCTCCTAATTT+CGG | + | chr1.3:50133755-50133774 | MS.gene036119:intron | 15.0% |
| !! | TTTGCTTATTATGTATAATA+AGG | - | chr1.3:50133831-50133850 | None:intergenic | 15.0% |
| !!! | AAATGCCATTATTTTATTAT+TGG | - | chr1.3:50135652-50135671 | None:intergenic | 15.0% |
| !!! | AATGCCATTATTTTATTATT+GGG | - | chr1.3:50135651-50135670 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAACATTGTTTT+CGG | - | chr1.3:50135941-50135960 | None:intergenic | 15.0% |
| !!! | TATGTCAAATATATTAGTTT+TGG | - | chr1.3:50133939-50133958 | None:intergenic | 15.0% |
| !!! | TTTTAGATATTGAATTAAGA+AGG | + | chr1.3:50132569-50132588 | MS.gene036119:intron | 15.0% |
| !! | AAACATCAATAAGTATGAAA+TGG | + | chr1.3:50136062-50136081 | MS.gene036119:intron | 20.0% |
| !! | AAACATTATGGAAATTAGAA+AGG | - | chr1.3:50132475-50132494 | None:intergenic | 20.0% |
| !! | ACATATGAAATTTAACTCAT+TGG | - | chr1.3:50132952-50132971 | None:intergenic | 20.0% |
| !! | ATGTAGTTGAATAAATTTGA+CGG | + | chr1.3:50134099-50134118 | MS.gene036119:intron | 20.0% |
| !! | CAAGAAATTTAAGCATTAAA+AGG | - | chr1.3:50133592-50133611 | None:intergenic | 20.0% |
| !! | CATATGAAATTTAACTCATT+GGG | - | chr1.3:50132951-50132970 | None:intergenic | 20.0% |
| !! | CTACAATATCATTATTACTA+TGG | - | chr1.3:50134954-50134973 | None:intergenic | 20.0% |
| !! | TAATGATATTGTAGATAATG+AGG | + | chr1.3:50134960-50134979 | MS.gene036119:CDS | 20.0% |
| !! | TAGAAAATCTTAGTAAGAAT+GGG | + | chr1.3:50136344-50136363 | MS.gene036119:CDS | 20.0% |
| !! | TCTTCCCAATAATAAAATAA+TGG | + | chr1.3:50135644-50135663 | MS.gene036119:intron | 20.0% |
| !!! | AAGAGAGTAAATATTTTGAT+TGG | + | chr1.3:50134809-50134828 | MS.gene036119:CDS | 20.0% |
| !!! | ATTAACATTTTGCTAACAAA+TGG | - | chr1.3:50134170-50134189 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAAACAAAGACAA+AGG | + | chr1.3:50135549-50135568 | MS.gene036119:CDS | 20.0% |
| !!! | CAATTTTAGATTTGGTTTTA+AGG | + | chr1.3:50132614-50132633 | MS.gene036119:intron | 20.0% |
| !!! | CTTATCTTAACATGTTTTAT+TGG | + | chr1.3:50132972-50132991 | MS.gene036119:intron | 20.0% |
| !!! | TAAAGGCATATAATTTTTAG+TGG | + | chr1.3:50133964-50133983 | MS.gene036119:intron | 20.0% |
| !!! | TCAAGAATCAATTTTAGATT+TGG | + | chr1.3:50132606-50132625 | MS.gene036119:intron | 20.0% |
| ! | AGCCTTCTGAATTAATATTT+CGG | - | chr1.3:50135056-50135075 | None:intergenic | 25.0% |
| ! | ATATCCTCTTTAATATGAGA+TGG | - | chr1.3:50135093-50135112 | None:intergenic | 25.0% |
| ! | ATCTAAAAACAGCAAAAAGA+GGG | + | chr1.3:50135224-50135243 | MS.gene036119:CDS | 25.0% |
| ! | ATGAAAATCAGCAAACATTA+TGG | - | chr1.3:50132487-50132506 | None:intergenic | 25.0% |
| ! | ATTATTACTATGGCAAACTT+TGG | - | chr1.3:50134944-50134963 | None:intergenic | 25.0% |
| ! | CGTAAAACTATTATGCATTA+TGG | + | chr1.3:50136733-50136752 | MS.gene036119:intron | 25.0% |
| ! | CTCATTGTAAAATTGTTGTA+GGG | - | chr1.3:50136151-50136170 | None:intergenic | 25.0% |
| ! | CTGATACCAACTAAAAATTT+GGG | - | chr1.3:50132802-50132821 | None:intergenic | 25.0% |
| ! | GTAGAAAATCTTAGTAAGAA+TGG | + | chr1.3:50136343-50136362 | MS.gene036119:CDS | 25.0% |
| ! | TCAGTGAAAATAGAAACAAA+CGG | + | chr1.3:50136025-50136044 | MS.gene036119:intron | 25.0% |
| ! | TCTGATACCAACTAAAAATT+TGG | - | chr1.3:50132803-50132822 | None:intergenic | 25.0% |
| ! | TTTAATCTTAAACTGCATCT+AGG | - | chr1.3:50133214-50133233 | None:intergenic | 25.0% |
| !! | ACATGTAGAAGAAAAACTTT+TGG | - | chr1.3:50135163-50135182 | None:intergenic | 25.0% |
| !! | AGTTAGAGAAAATGCATTTT+TGG | + | chr1.3:50135910-50135929 | MS.gene036119:intron | 25.0% |
| !! | ATACTGAATGAATTTTCAGA+TGG | - | chr1.3:50136321-50136340 | None:intergenic | 25.0% |
| !! | ATGTAGAAGAAAAACTTTTG+GGG | - | chr1.3:50135161-50135180 | None:intergenic | 25.0% |
| !! | CATGTAGAAGAAAAACTTTT+GGG | - | chr1.3:50135162-50135181 | None:intergenic | 25.0% |
| !! | GTTTTTACACAATTCAGTTA+TGG | + | chr1.3:50134624-50134643 | MS.gene036119:CDS | 25.0% |
| !! | TAGTCAGCATACTTTATTTA+AGG | - | chr1.3:50133553-50133572 | None:intergenic | 25.0% |
| !! | TCTAGAAAGAGTATATGTAA+AGG | - | chr1.3:50136409-50136428 | None:intergenic | 25.0% |
| !!! | AATTTCTAGTCCATCTTTTA+AGG | + | chr1.3:50133341-50133360 | MS.gene036119:CDS | 25.0% |
| !!! | ATTACATACATTGATTTGAG+TGG | + | chr1.3:50135701-50135720 | MS.gene036119:intron | 25.0% |
| !!! | GAGTAAATATTTTGATTGGA+CGG | + | chr1.3:50134813-50134832 | MS.gene036119:CDS | 25.0% |
| !!! | TATGTACATTTCTGTTGTTT+TGG | - | chr1.3:50136812-50136831 | None:intergenic | 25.0% |
| AACAATTGTCTGTAAATGCA+AGG | - | chr1.3:50133490-50133509 | None:intergenic | 30.0% | |
| AGGAAATTTCAATGTGTATG+AGG | - | chr1.3:50134746-50134765 | None:intergenic | 30.0% | |
| AGTTGCATCATTGAAGAATA+AGG | - | chr1.3:50133374-50133393 | None:intergenic | 30.0% | |
| ATATTGAATTAAGAAGGGCA+TGG | + | chr1.3:50132575-50132594 | MS.gene036119:intron | 30.0% | |
| ATGTATAATAAGGACTGACA+GGG | - | chr1.3:50133821-50133840 | None:intergenic | 30.0% | |
| CATCTAAAAACAGCAAAAAG+AGG | + | chr1.3:50135223-50135242 | MS.gene036119:CDS | 30.0% | |
| CCTAACGAATATACATGATA+CGG | - | chr1.3:50133158-50133177 | None:intergenic | 30.0% | |
| CCTCATTGTAAAATTGTTGT+AGG | - | chr1.3:50136152-50136171 | None:intergenic | 30.0% | |
| CGTATCATGTATATTCGTTA+GGG | + | chr1.3:50133156-50133175 | MS.gene036119:CDS | 30.0% | |
| CGTCAAAATGAGTTTAGAAA+CGG | + | chr1.3:50132730-50132749 | MS.gene036119:intron | 30.0% | |
| CTTAACTGTGATAGAGAATA+TGG | + | chr1.3:50135882-50135901 | MS.gene036119:intron | 30.0% | |
| GACCGAAATATTAATTCAGA+AGG | + | chr1.3:50135051-50135070 | MS.gene036119:CDS | 30.0% | |
| GTATCATGTATATTCGTTAG+GGG | + | chr1.3:50133157-50133176 | MS.gene036119:CDS | 30.0% | |
| GTCAAAATGAGTTTAGAAAC+GGG | + | chr1.3:50132731-50132750 | MS.gene036119:intron | 30.0% | |
| GTGATAACTAATGTTCATCA+AGG | - | chr1.3:50135787-50135806 | None:intergenic | 30.0% | |
| GTTCTCTTAACTCCTTAATA+CGG | - | chr1.3:50135305-50135324 | None:intergenic | 30.0% | |
| TACCAACTAAAAATTTGGGT+TGG | - | chr1.3:50132798-50132817 | None:intergenic | 30.0% | |
| TAGCATGTAATTATTGTGCT+CGG | + | chr1.3:50134063-50134082 | MS.gene036119:intron | 30.0% | |
| TATGTATAATAAGGACTGAC+AGG | - | chr1.3:50133822-50133841 | None:intergenic | 30.0% | |
| TATTAAGGAGTTAAGAGAAC+TGG | + | chr1.3:50135305-50135324 | MS.gene036119:CDS | 30.0% | |
| TCAAAATGAGTTTAGAAACG+GGG | + | chr1.3:50132732-50132751 | MS.gene036119:intron | 30.0% | |
| TCAACCATCTCATATTAAAG+AGG | + | chr1.3:50135086-50135105 | MS.gene036119:CDS | 30.0% | |
| TCAGAAAATGACTATTGATG+TGG | + | chr1.3:50134417-50134436 | MS.gene036119:CDS | 30.0% | |
| TCATTATGAACAGAAACTTC+AGG | - | chr1.3:50135033-50135052 | None:intergenic | 30.0% | |
| TCCTGTATAGTAAGATTTGA+AGG | + | chr1.3:50133403-50133422 | MS.gene036119:intron | 30.0% | |
| TCTGATTATCAACAACAACA+GGG | + | chr1.3:50136268-50136287 | MS.gene036119:CDS | 30.0% | |
| TTCATGTTATAGAGGTTTCT+TGG | + | chr1.3:50132502-50132521 | MS.gene036119:intron | 30.0% | |
| TTTAAGCATTAAAAGGGACA+AGG | - | chr1.3:50133585-50133604 | None:intergenic | 30.0% | |
| ! | ATCATAGTTTGAGTTTGTCA+GGG | + | chr1.3:50135118-50135137 | MS.gene036119:CDS | 30.0% |
| ! | ATTCATGATAATGAGCGTAA+GGG | - | chr1.3:50136455-50136474 | None:intergenic | 30.0% |
| ! | CCTACAACAATTTTACAATG+AGG | + | chr1.3:50136149-50136168 | MS.gene036119:intron | 30.0% |
| ! | TCTTAGTAGTTGATGCAAAT+TGG | - | chr1.3:50132269-50132288 | None:intergenic | 30.0% |
| ! | TGTAGAAGAAAAACTTTTGG+GGG | - | chr1.3:50135160-50135179 | None:intergenic | 30.0% |
| ! | TGTTCTACAAGCATTTTGTT+TGG | + | chr1.3:50132647-50132666 | MS.gene036119:intron | 30.0% |
| !! | ACATTGATTTGAGTGGAATT+AGG | + | chr1.3:50135708-50135727 | MS.gene036119:intron | 30.0% |
| !! | ATTGGAAGTATGCTATCTTT+TGG | + | chr1.3:50132308-50132327 | MS.gene036119:CDS | 30.0% |
| !! | ATTTTGACGTCATATCTGAT+TGG | - | chr1.3:50132719-50132738 | None:intergenic | 30.0% |
| !! | CTTAACATGTTTTATTGGTG+TGG | + | chr1.3:50132977-50132996 | MS.gene036119:intron | 30.0% |
| !! | CTTGCATTTGTTATGTTGTT+AGG | + | chr1.3:50132909-50132928 | MS.gene036119:intron | 30.0% |
| !! | GTCATTTTCTGATAAACAGT+AGG | - | chr1.3:50134409-50134428 | None:intergenic | 30.0% |
| !! | TGACGGATTGTATAATAGTT+TGG | + | chr1.3:50134116-50134135 | MS.gene036119:intron | 30.0% |
| !! | TGATGGACTTGTTAAATCTT+TGG | - | chr1.3:50134662-50134681 | None:intergenic | 30.0% |
| !! | TGCTTGTTCAATTGCTATTT+AGG | + | chr1.3:50135604-50135623 | MS.gene036119:intron | 30.0% |
| !!! | CTCTTTTTGCTGTTTTTAGA+TGG | - | chr1.3:50135225-50135244 | None:intergenic | 30.0% |
| !!! | TGCTGATTTTCATGTTATAG+AGG | + | chr1.3:50132494-50132513 | MS.gene036119:intron | 30.0% |
| ACCAAGCAATTACCGAAATT+AGG | - | chr1.3:50133770-50133789 | None:intergenic | 35.0% | |
| ACTACTAAGAAGCCTTTGTT+TGG | + | chr1.3:50132279-50132298 | MS.gene036119:CDS | 35.0% | |
| ACTTGTAGTTCCAATTCTTG+TGG | + | chr1.3:50135412-50135431 | MS.gene036119:intron | 35.0% | |
| AGACAAAGGTAACGTCTTAT+TGG | + | chr1.3:50135563-50135582 | MS.gene036119:intron | 35.0% | |
| AGAGCCTATTCAATATCTGT+TGG | + | chr1.3:50132820-50132839 | MS.gene036119:intron | 35.0% | |
| ATGTATATTCGTTAGGGGAA+GGG | + | chr1.3:50133162-50133181 | MS.gene036119:CDS | 35.0% | |
| ATGTGTGAAGGGAACAATAA+TGG | + | chr1.3:50134559-50134578 | MS.gene036119:CDS | 35.0% | |
| CAAATGAAAGGATGTGTGAA+GGG | + | chr1.3:50134548-50134567 | MS.gene036119:CDS | 35.0% | |
| CAACAGAAATGTACATAGAC+TGG | + | chr1.3:50136815-50136834 | MS.gene036119:CDS | 35.0% | |
| CAGAGAATACGAAACAAGTA+GGG | + | chr1.3:50134515-50134534 | MS.gene036119:CDS | 35.0% | |
| CCGTATCATGTATATTCGTT+AGG | + | chr1.3:50133155-50133174 | MS.gene036119:CDS | 35.0% | |
| CTCTGATTATCAACAACAAC+AGG | + | chr1.3:50136267-50136286 | MS.gene036119:CDS | 35.0% | |
| CTGACAAACTCAAACTATGA+TGG | - | chr1.3:50135119-50135138 | None:intergenic | 35.0% | |
| CTTCTGCTATCTCAAGAAAA+TGG | - | chr1.3:50136508-50136527 | None:intergenic | 35.0% | |
| GACGAGATTCAAAAGTCAAT+TGG | - | chr1.3:50134894-50134913 | None:intergenic | 35.0% | |
| GACTGCAATAATTGAACAAG+CGG | - | chr1.3:50136852-50136871 | None:intergenic | 35.0% | |
| GAGCCTATTCAATATCTGTT+GGG | + | chr1.3:50132821-50132840 | MS.gene036119:intron | 35.0% | |
| GCCTTCAAATCTTACTATAC+AGG | - | chr1.3:50133407-50133426 | None:intergenic | 35.0% | |
| GGATGAAACCTTCAAATGAA+AGG | + | chr1.3:50134536-50134555 | MS.gene036119:CDS | 35.0% | |
| GGGAAGAATCACAATTATCA+GGG | - | chr1.3:50133049-50133068 | None:intergenic | 35.0% | |
| TAACACACAGAAAACCATGA+CGG | + | chr1.3:50134327-50134346 | MS.gene036119:CDS | 35.0% | |
| TAATTTCGGTAATTGCTTGG+TGG | + | chr1.3:50133769-50133788 | MS.gene036119:intron | 35.0% | |
| TACACATTGAAATTTCCTGC+TGG | + | chr1.3:50134748-50134767 | MS.gene036119:CDS | 35.0% | |
| TACATAGACTGGACATCTTA+TGG | + | chr1.3:50136826-50136845 | MS.gene036119:CDS | 35.0% | |
| TACTGTAGAAACAGGACATT+AGG | - | chr1.3:50133260-50133279 | None:intergenic | 35.0% | |
| TCAAATGAAAGGATGTGTGA+AGG | + | chr1.3:50134547-50134566 | MS.gene036119:CDS | 35.0% | |
| TCAATGATGCAACTTGCATT+TGG | + | chr1.3:50133380-50133399 | MS.gene036119:intron | 35.0% | |
| TCACACATCCTTTCATTTGA+AGG | - | chr1.3:50134547-50134566 | None:intergenic | 35.0% | |
| TCCAATCAGTATCCAAACAA+AGG | - | chr1.3:50132294-50132313 | None:intergenic | 35.0% | |
| TCCTAATTTCGGTAATTGCT+TGG | + | chr1.3:50133766-50133785 | MS.gene036119:intron | 35.0% | |
| TCTATTCGTGATCACACATT+AGG | + | chr1.3:50134271-50134290 | MS.gene036119:CDS | 35.0% | |
| TGGGAAGAATCACAATTATC+AGG | - | chr1.3:50133050-50133069 | None:intergenic | 35.0% | |
| TTAACTCCTTAATACGGTCT+TGG | - | chr1.3:50135299-50135318 | None:intergenic | 35.0% | |
| TTAGTTATCACTGAAGCCAA+TGG | + | chr1.3:50135796-50135815 | MS.gene036119:intron | 35.0% | |
| TTATGTCAAGACTTGACATC+TGG | - | chr1.3:50132878-50132897 | None:intergenic | 35.0% | |
| ! | AACGATGAGACATTTTTGTC+TGG | - | chr1.3:50134607-50134626 | None:intergenic | 35.0% |
| ! | AAGATTTGAAGGCGTGTAAT+TGG | + | chr1.3:50133414-50133433 | MS.gene036119:intron | 35.0% |
| ! | CATCATAGTTTGAGTTTGTC+AGG | + | chr1.3:50135117-50135136 | MS.gene036119:CDS | 35.0% |
| ! | GATTCATGATAATGAGCGTA+AGG | - | chr1.3:50136456-50136475 | None:intergenic | 35.0% |
| ! | TATAGAGGTTTCTTGGTGAT+TGG | + | chr1.3:50132509-50132528 | MS.gene036119:intron | 35.0% |
| ! | TATGAGTTACATGAAGCACT+TGG | + | chr1.3:50134772-50134791 | MS.gene036119:CDS | 35.0% |
| ! | TCAGCTTCTACATTTTCTGA+TGG | - | chr1.3:50134679-50134698 | None:intergenic | 35.0% |
| ! | TTACTCTCTTTGAGAAAACC+TGG | - | chr1.3:50134799-50134818 | None:intergenic | 35.0% |
| ! | TTTAAGCTTTGTGAATAGCC+AGG | + | chr1.3:50135759-50135778 | MS.gene036119:intron | 35.0% |
| ! | TTTTCTAATCCTGTCTCAGT+AGG | + | chr1.3:50135366-50135385 | MS.gene036119:intron | 35.0% |
| !! | AATGTCCTGTTTCTACAGTA+TGG | + | chr1.3:50133260-50133279 | MS.gene036119:intron | 35.0% |
| !! | ATTGACTTTTGAATCTCGTC+CGG | + | chr1.3:50134894-50134913 | MS.gene036119:CDS | 35.0% |
| !! | CTGTTGTTGTTGATAATCAG+AGG | - | chr1.3:50136269-50136288 | None:intergenic | 35.0% |
| !!! | ACCTTACAAGTTGGTTTTGT+GGG | + | chr1.3:50132761-50132780 | MS.gene036119:intron | 35.0% |
| !!! | TATTTTGATTGGACGGTACA+AGG | + | chr1.3:50134820-50134839 | MS.gene036119:CDS | 35.0% |
| AAAACAGCAAAAAGAGGGCT+AGG | + | chr1.3:50135229-50135248 | MS.gene036119:CDS | 40.0% | |
| AAACCTTCAGCCACAAGAAT+TGG | - | chr1.3:50135425-50135444 | None:intergenic | 40.0% | |
| AAATGAAATTCCAGCTACCC+TGG | - | chr1.3:50135848-50135867 | None:intergenic | 40.0% | |
| AACAACAACAGGGTTCAAGT+TGG | + | chr1.3:50136278-50136297 | MS.gene036119:CDS | 40.0% | |
| AACACACAGAAAACCATGAC+GGG | + | chr1.3:50134328-50134347 | MS.gene036119:CDS | 40.0% | |
| AATGAAATTCCAGCTACCCT+GGG | - | chr1.3:50135847-50135866 | None:intergenic | 40.0% | |
| ACTGATCCAAGACCGTATTA+AGG | + | chr1.3:50135290-50135309 | MS.gene036119:CDS | 40.0% | |
| ACTGCTTCCAAAAGATGTTC+CGG | - | chr1.3:50134916-50134935 | None:intergenic | 40.0% | |
| AGGATCCTCACCTTAAAAGA+TGG | - | chr1.3:50133354-50133373 | None:intergenic | 40.0% | |
| AGGGTAGCTGGAATTTCATT+TGG | + | chr1.3:50135847-50135866 | MS.gene036119:intron | 40.0% | |
| ATCATTTCCTACATCAGTGC+AGG | + | chr1.3:50134984-50135003 | MS.gene036119:CDS | 40.0% | |
| ATCGATGAATTGTCTGTCAC+AGG | + | chr1.3:50136785-50136804 | MS.gene036119:intron | 40.0% | |
| CAACGTTGTGCTAGAATGTA+TGG | + | chr1.3:50132337-50132356 | MS.gene036119:intron | 40.0% | |
| CATGTATATTCGTTAGGGGA+AGG | + | chr1.3:50133161-50133180 | MS.gene036119:CDS | 40.0% | |
| CATTTGCCTGTCAACATGTA+AGG | - | chr1.3:50134037-50134056 | None:intergenic | 40.0% | |
| CTAATGTTCATCAAGGAACC+TGG | - | chr1.3:50135780-50135799 | None:intergenic | 40.0% | |
| CTGTTACTGGAAAACATCAG+TGG | + | chr1.3:50133295-50133314 | MS.gene036119:CDS | 40.0% | |
| CTTGAAATTGACAGCGATCA+AGG | + | chr1.3:50134454-50134473 | MS.gene036119:CDS | 40.0% | |
| GCAGAGAATACGAAACAAGT+AGG | + | chr1.3:50134514-50134533 | MS.gene036119:CDS | 40.0% | |
| GCATTCACAGATGACAGAAA+AGG | - | chr1.3:50134201-50134220 | None:intergenic | 40.0% | |
| GGTATCCTCGTAAAAAGACT+CGG | - | chr1.3:50134725-50134744 | None:intergenic | 40.0% | |
| TCATGTAACTCATAACCAGC+AGG | - | chr1.3:50134766-50134785 | None:intergenic | 40.0% | |
| TCCAACCATACTGTAGAAAC+AGG | - | chr1.3:50133268-50133287 | None:intergenic | 40.0% | |
| TCGATGAATTGTCTGTCACA+GGG | + | chr1.3:50136786-50136805 | MS.gene036119:intron | 40.0% | |
| TCGCAACAGATAATCCTAGA+GGG | - | chr1.3:50133130-50133149 | None:intergenic | 40.0% | |
| TGGCCCAACAGATATTGAAT+AGG | - | chr1.3:50132827-50132846 | None:intergenic | 40.0% | |
| TGTGAATGTTGTTGCCAATG+CGG | + | chr1.3:50133617-50133636 | MS.gene036119:intron | 40.0% | |
| TTCGCAACAGATAATCCTAG+AGG | - | chr1.3:50133131-50133150 | None:intergenic | 40.0% | |
| TTTCTACAGTATGGTTGGAC+AGG | + | chr1.3:50133269-50133288 | MS.gene036119:intron | 40.0% | |
| TTTCTGTCATCTGTGAATGC+AGG | + | chr1.3:50134201-50134220 | MS.gene036119:intron | 40.0% | |
| ! | AATAGCTTTTCCCAGGACAT+TGG | - | chr1.3:50134381-50134400 | None:intergenic | 40.0% |
| ! | ACAACAACAGGGTTCAAGTT+GGG | + | chr1.3:50136279-50136298 | MS.gene036119:CDS | 40.0% |
| ! | ATAGCTTTTCCCAGGACATT+GGG | - | chr1.3:50134380-50134399 | None:intergenic | 40.0% |
| ! | ATGCATGTGTTTTGTGGTTG+AGG | + | chr1.3:50136589-50136608 | MS.gene036119:CDS | 40.0% |
| ! | ATGTAAGGCTTGGTAAGTCA+GGG | - | chr1.3:50134022-50134041 | None:intergenic | 40.0% |
| ! | ATGTGTTTTGTGGTTGAGGT+AGG | + | chr1.3:50136593-50136612 | MS.gene036119:intron | 40.0% |
| ! | GAAGACATGCATGTGTTTTG+TGG | + | chr1.3:50136583-50136602 | MS.gene036119:CDS | 40.0% |
| ! | GAGTGGAATTAGGCTTTGAT+CGG | + | chr1.3:50135718-50135737 | MS.gene036119:intron | 40.0% |
| ! | GATTCTCTTTTGAACCGCAT+TGG | - | chr1.3:50133634-50133653 | None:intergenic | 40.0% |
| ! | GATTTTTCACATGACCCTCT+AGG | + | chr1.3:50133113-50133132 | MS.gene036119:CDS | 40.0% |
| ! | GCCTTTGTTTGGATACTGAT+TGG | + | chr1.3:50132290-50132309 | MS.gene036119:CDS | 40.0% |
| ! | TGACATCGATTGAAGCAAGA+TGG | - | chr1.3:50134482-50134501 | None:intergenic | 40.0% |
| ! | TTAAGAGAACTGGTGCCAAA+CGG | + | chr1.3:50135315-50135334 | MS.gene036119:CDS | 40.0% |
| ! | TTCACGCTTTGGATTTGACT+AGG | - | chr1.3:50134304-50134323 | None:intergenic | 40.0% |
| ! | TTGGGACTGACGATTTTGAA+CGG | + | chr1.3:50136539-50136558 | MS.gene036119:CDS | 40.0% |
| !! | ACGTCTTATTGGCTTTGAGA+TGG | + | chr1.3:50135574-50135593 | MS.gene036119:intron | 40.0% |
| !! | GTGCAGTATTGATTCACTGT+TGG | + | chr1.3:50135462-50135481 | MS.gene036119:intron | 40.0% |
| !! | GTTCTGAGAGCACATACTTT+GGG | - | chr1.3:50133069-50133088 | None:intergenic | 40.0% |
| !! | TCCTGTTTCTACAGTATGGT+TGG | + | chr1.3:50133264-50133283 | MS.gene036119:intron | 40.0% |
| !! | TGTTCTGAGAGCACATACTT+TGG | - | chr1.3:50133070-50133089 | None:intergenic | 40.0% |
| !!! | CACCTTACAAGTTGGTTTTG+TGG | + | chr1.3:50132760-50132779 | MS.gene036119:intron | 40.0% |
| !!! | CCTTACAAGTTGGTTTTGTG+GGG | + | chr1.3:50132762-50132781 | MS.gene036119:intron | 40.0% |
| !!! | CTAGTCCATCTTTTAAGGTG+AGG | + | chr1.3:50133346-50133365 | MS.gene036119:intron | 40.0% |
| !!! | GGCCAACCCAAATTTTTAGT+TGG | + | chr1.3:50132793-50132812 | MS.gene036119:intron | 40.0% |
| AAACCAAAGCCTACTGAGAC+AGG | - | chr1.3:50135378-50135397 | None:intergenic | 45.0% | |
| AAAGTTGTAGGCCTAGACCA+AGG | + | chr1.3:50135259-50135278 | MS.gene036119:CDS | 45.0% | |
| AACTGCGCAGTTGCATCATA+TGG | + | chr1.3:50136225-50136244 | MS.gene036119:intron | 45.0% | |
| AACTGGTTACTACACGAGCT+AGG | - | chr1.3:50135186-50135205 | None:intergenic | 45.0% | |
| AAGTTGTAGGCCTAGACCAA+GGG | + | chr1.3:50135260-50135279 | MS.gene036119:CDS | 45.0% | |
| AATCCTGTCTCAGTAGGCTT+TGG | + | chr1.3:50135372-50135391 | MS.gene036119:intron | 45.0% | |
| AATTTCAAGCCCCTCGTGTT+TGG | - | chr1.3:50134443-50134462 | None:intergenic | 45.0% | |
| ACCAAGCCTTACATGTTGAC+AGG | + | chr1.3:50134028-50134047 | MS.gene036119:intron | 45.0% | |
| ACCTATGCCATTGTAACCCA+GGG | + | chr1.3:50135828-50135847 | MS.gene036119:intron | 45.0% | |
| ACCTTGGAGCAGATCTATGT+TGG | + | chr1.3:50133089-50133108 | MS.gene036119:CDS | 45.0% | |
| ATCAAGTGTTTCACCCGTCA+TGG | - | chr1.3:50134344-50134363 | None:intergenic | 45.0% | |
| ATTGATGTGGCCAAACACGA+GGG | + | chr1.3:50134430-50134449 | MS.gene036119:CDS | 45.0% | |
| CAAGATACCTTTGCTCCGTT+TGG | - | chr1.3:50135333-50135352 | None:intergenic | 45.0% | |
| CAGCATGCTTAGTTACGCTT+TGG | - | chr1.3:50135516-50135535 | None:intergenic | 45.0% | |
| CCACTTGGAGTTGTTCAACT+TGG | + | chr1.3:50133525-50133544 | MS.gene036119:CDS | 45.0% | |
| CCCCACAAAACCAACTTGTA+AGG | - | chr1.3:50132765-50132784 | None:intergenic | 45.0% | |
| CGTGTAGTAACCAGTTTGAG+AGG | + | chr1.3:50135190-50135209 | MS.gene036119:CDS | 45.0% | |
| GACGGGTGAAACACTTGATA+TGG | + | chr1.3:50134345-50134364 | MS.gene036119:CDS | 45.0% | |
| GTCAAGACTTGACATCTGGA+GGG | - | chr1.3:50132874-50132893 | None:intergenic | 45.0% | |
| GTGTGTTACGTTTCACGCTT+TGG | - | chr1.3:50134315-50134334 | None:intergenic | 45.0% | |
| GTTACAATGGCATAGGTGTG+AGG | - | chr1.3:50135825-50135844 | None:intergenic | 45.0% | |
| GTTCAGAAGACCTCTCAAAC+TGG | - | chr1.3:50135203-50135222 | None:intergenic | 45.0% | |
| GTTCCAATTCTTGTGGCTGA+AGG | + | chr1.3:50135419-50135438 | MS.gene036119:intron | 45.0% | |
| TACATCAGTGCAGGACACAA+TGG | + | chr1.3:50134993-50135012 | MS.gene036119:CDS | 45.0% | |
| TATGTGCTCTCAGAACACCT+TGG | + | chr1.3:50133073-50133092 | MS.gene036119:CDS | 45.0% | |
| TATTGATGTGGCCAAACACG+AGG | + | chr1.3:50134429-50134448 | MS.gene036119:CDS | 45.0% | |
| TCATGAATGTGTGGTGCTCT+TGG | - | chr1.3:50136874-50136893 | None:intergenic | 45.0% | |
| TCCAACATAGATCTGCTCCA+AGG | - | chr1.3:50133093-50133112 | None:intergenic | 45.0% | |
| TGCTTGCAGGATCTTGACAT+GGG | + | chr1.3:50133004-50133023 | MS.gene036119:intron | 45.0% | |
| TGTCAAGACTTGACATCTGG+AGG | - | chr1.3:50132875-50132894 | None:intergenic | 45.0% | |
| TGTCATCTGTGAATGCAGGT+TGG | + | chr1.3:50134205-50134224 | MS.gene036119:intron | 45.0% | |
| TTGAGTTTGTCAGGGATCTG+CGG | + | chr1.3:50135126-50135145 | MS.gene036119:CDS | 45.0% | |
| TTGCTTGCAGGATCTTGACA+TGG | + | chr1.3:50133003-50133022 | MS.gene036119:intron | 45.0% | |
| ! | ATCTCGTCCGGAACATCTTT+TGG | + | chr1.3:50134906-50134925 | MS.gene036119:CDS | 45.0% |
| ! | ATTGTGTCCTGCACTGATGT+AGG | - | chr1.3:50134994-50135013 | None:intergenic | 45.0% |
| ! | CATAGGTGTGAGGTATCCAT+TGG | - | chr1.3:50135815-50135834 | None:intergenic | 45.0% |
| ! | CATGTAAGGCTTGGTAAGTC+AGG | - | chr1.3:50134023-50134042 | None:intergenic | 45.0% |
| ! | CCAAGTTGAACAACTCCAAG+TGG | - | chr1.3:50133528-50133547 | None:intergenic | 45.0% |
| ! | CGCTTTGGATTTGACTAGGA+AGG | - | chr1.3:50134300-50134319 | None:intergenic | 45.0% |
| ! | GGAGATGAATAGCTTTTCCC+AGG | - | chr1.3:50134388-50134407 | None:intergenic | 45.0% |
| ! | TCAGACCGAGTCTTTTTACG+AGG | + | chr1.3:50134717-50134736 | MS.gene036119:CDS | 45.0% |
| ! | TTACATGAAGCACTTGGACC+AGG | + | chr1.3:50134778-50134797 | MS.gene036119:CDS | 45.0% |
| !! | AATGCAGGTTGGTGAAGACA+TGG | + | chr1.3:50134216-50134235 | MS.gene036119:intron | 45.0% |
| !! | ATGCAGGTTGGTGAAGACAT+GGG | + | chr1.3:50134217-50134236 | MS.gene036119:intron | 45.0% |
| !! | CTTGGTGGTGATTGAAGCAT+TGG | + | chr1.3:50133784-50133803 | MS.gene036119:intron | 45.0% |
| !! | GGAACATCTTTTGGAAGCAG+TGG | + | chr1.3:50134915-50134934 | MS.gene036119:CDS | 45.0% |
| !!! | TGGTTTTGTGGGGTTGAGTT+AGG | + | chr1.3:50132772-50132791 | MS.gene036119:intron | 45.0% |
| ACCCTGGGTTACAATGGCAT+AGG | - | chr1.3:50135832-50135851 | None:intergenic | 50.0% | |
| AGCAGAAGCCGTAAGAAGCT+TGG | + | chr1.3:50136520-50136539 | MS.gene036119:CDS | 50.0% | |
| AGTTGTCTGTCCCTTGGTCT+AGG | - | chr1.3:50135273-50135292 | None:intergenic | 50.0% | |
| CACCTATGCCATTGTAACCC+AGG | + | chr1.3:50135827-50135846 | MS.gene036119:intron | 50.0% | |
| CACCTGCTATCAGATCACCT+GGG | + | chr1.3:50132845-50132864 | MS.gene036119:intron | 50.0% | |
| CATGCTACAGATGCTCTGTG+AGG | + | chr1.3:50136475-50136494 | MS.gene036119:intron | 50.0% | |
| CGTCAGTCCCAAGCTTCTTA+CGG | - | chr1.3:50136531-50136550 | None:intergenic | 50.0% | |
| CTAGGCCAGGTGAAAGTTGT+AGG | + | chr1.3:50135247-50135266 | MS.gene036119:CDS | 50.0% | |
| CTAGGCCTACAACTTTCACC+TGG | - | chr1.3:50135255-50135274 | None:intergenic | 50.0% | |
| GCAGAAGCCGTAAGAAGCTT+GGG | + | chr1.3:50136521-50136540 | MS.gene036119:CDS | 50.0% | |
| GCCTGTCAACATGTAAGGCT+TGG | - | chr1.3:50134032-50134051 | None:intergenic | 50.0% | |
| GGGTGTCTCACCTTACAAGT+TGG | + | chr1.3:50132752-50132771 | MS.gene036119:intron | 50.0% | |
| GTCGTAGCAGTACTACCACT+TGG | + | chr1.3:50133510-50133529 | MS.gene036119:CDS | 50.0% | |
| GTTGGACAGGTAGCTGTTAC+TGG | + | chr1.3:50133282-50133301 | MS.gene036119:CDS | 50.0% | |
| TGATGCAACTGCGCAGTTGT+AGG | - | chr1.3:50136223-50136242 | None:intergenic | 50.0% | |
| TGGATCAGTTGTCTGTCCCT+TGG | - | chr1.3:50135279-50135298 | None:intergenic | 50.0% | |
| TTGATGTGGCCAAACACGAG+GGG | + | chr1.3:50134431-50134450 | MS.gene036119:CDS | 50.0% | |
| TTGCAGGATCTTGACATGGG+AGG | + | chr1.3:50133007-50133026 | MS.gene036119:intron | 50.0% | |
| TTGGTGTGGCAATTGCTTGC+AGG | + | chr1.3:50132991-50133010 | MS.gene036119:intron | 50.0% | |
| ! | CTTTTCCCAGGACATTGGGA+GGG | - | chr1.3:50134376-50134395 | None:intergenic | 50.0% |
| ! | GAATGGGCAGATGCTTGTTG+AGG | + | chr1.3:50136360-50136379 | MS.gene036119:CDS | 50.0% |
| !! | ACAGGGTTCAAGTTGGGCAA+TGG | + | chr1.3:50136285-50136304 | MS.gene036119:CDS | 50.0% |
| !! | TCAAGTTGGGCAATGGAGGT+AGG | + | chr1.3:50136292-50136311 | MS.gene036119:CDS | 50.0% |
| !! | TGCAGGTTGGTGAAGACATG+GGG | + | chr1.3:50134218-50134237 | MS.gene036119:intron | 50.0% |
| AACGGTGCAAGTGAAGCTCG+TGG | + | chr1.3:50136557-50136576 | MS.gene036119:CDS | 55.0% | |
| AGCAAAAAGAGGGCTAGGCC+AGG | + | chr1.3:50135234-50135253 | MS.gene036119:CDS | 55.0% | |
| AGTTGGGCAATGGAGGTAGG+AGG | + | chr1.3:50136295-50136314 | MS.gene036119:CDS | 55.0% | |
| CCACCTGCTATCAGATCACC+TGG | + | chr1.3:50132844-50132863 | MS.gene036119:intron | 55.0% | |
| CCAGCTACCCTGGGTTACAA+TGG | - | chr1.3:50135838-50135857 | None:intergenic | 55.0% | |
| CCAGGTGATCTGATAGCAGG+TGG | - | chr1.3:50132847-50132866 | None:intergenic | 55.0% | |
| CCATTGTAACCCAGGGTAGC+TGG | + | chr1.3:50135835-50135854 | MS.gene036119:intron | 55.0% | |
| GACCCAGGTGATCTGATAGC+AGG | - | chr1.3:50132850-50132869 | None:intergenic | 55.0% | |
| TAACGCCCTCCCAATGTCCT+GGG | + | chr1.3:50134368-50134387 | MS.gene036119:CDS | 55.0% | |
| ! | ACTGGTGCCAAACGGAGCAA+AGG | + | chr1.3:50135323-50135342 | MS.gene036119:CDS | 55.0% |
| ! | GCTTTTCCCAGGACATTGGG+AGG | - | chr1.3:50134377-50134396 | None:intergenic | 55.0% |
| !! | GGGTTCAAGTTGGGCAATGG+AGG | + | chr1.3:50136288-50136307 | MS.gene036119:CDS | 55.0% |
| GTAACGCCCTCCCAATGTCC+TGG | + | chr1.3:50134367-50134386 | MS.gene036119:CDS | 60.0% | |
| TGACATCTGGAGGGTGACCC+AGG | - | chr1.3:50132865-50132884 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 50132259 | 50136893 | 50132259 | ID=MS.gene036119 |
| chr1.3 | mRNA | 50132259 | 50136893 | 50132259 | ID=MS.gene036119.t1;Parent=MS.gene036119 |
| chr1.3 | exon | 50132259 | 50132353 | 50132259 | ID=MS.gene036119.t1.exon1;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50132259 | 50132353 | 50132259 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50133013 | 50133183 | 50133013 | ID=MS.gene036119.t1.exon2;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50133013 | 50133183 | 50133013 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50133278 | 50133362 | 50133278 | ID=MS.gene036119.t1.exon3;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50133278 | 50133362 | 50133278 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50133501 | 50133560 | 50133501 | ID=MS.gene036119.t1.exon4;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50133501 | 50133560 | 50133501 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50134223 | 50135344 | 50134223 | ID=MS.gene036119.t1.exon5;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50134223 | 50135344 | 50134223 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50135463 | 50135570 | 50135463 | ID=MS.gene036119.t1.exon6;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50135463 | 50135570 | 50135463 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50136235 | 50136381 | 50136235 | ID=MS.gene036119.t1.exon7;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50136235 | 50136381 | 50136235 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50136485 | 50136610 | 50136485 | ID=MS.gene036119.t1.exon8;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50136485 | 50136610 | 50136485 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| chr1.3 | exon | 50136807 | 50136893 | 50136807 | ID=MS.gene036119.t1.exon9;Parent=MS.gene036119.t1 |
| chr1.3 | CDS | 50136807 | 50136893 | 50136807 | ID=cds.MS.gene036119.t1;Parent=MS.gene036119.t1 |
| Gene Sequence |
| Protein sequence |
