Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036252.t1 | XP_003590705.2 | 94.2 | 998 | 51 | 2 | 1 | 997 | 3 | 994 | 0.00E+00 | 1799.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036252.t1 | A4FUF0 | 34.1 | 91 | 56 | 2 | 367 | 457 | 8 | 94 | 1.4e-06 | 57.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036252.t1 | G7I2L8 | 94.2 | 998 | 51 | 2 | 1 | 997 | 3 | 994 | 0.0e+00 | 1799.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene24697 | MS.gene036252 | PPI |
MS.gene045233 | MS.gene036252 | PPI |
MS.gene036252 | MS.gene007196 | PPI |
MS.gene46640 | MS.gene036252 | PPI |
MS.gene79130 | MS.gene036252 | PPI |
MS.gene050299 | MS.gene036252 | PPI |
MS.gene95527 | MS.gene036252 | PPI |
MS.gene92710 | MS.gene036252 | PPI |
MS.gene07741 | MS.gene036252 | PPI |
MS.gene036252 | MS.gene045235 | PPI |
MS.gene77911 | MS.gene036252 | PPI |
MS.gene036252 | MS.gene55120 | PPI |
MS.gene067033 | MS.gene036252 | PPI |
MS.gene75575 | MS.gene036252 | PPI |
MS.gene045232 | MS.gene036252 | PPI |
MS.gene036252 | MS.gene037044 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036252.t1 | MTR_1g072780 | 94.589 | 998 | 47 | 2 | 1 | 997 | 3 | 994 | 0.0 | 1890 |
MS.gene036252.t1 | MTR_1g049120 | 54.332 | 681 | 245 | 15 | 358 | 997 | 283 | 938 | 0.0 | 650 |
MS.gene036252.t1 | MTR_4g036445 | 50.000 | 374 | 160 | 10 | 316 | 672 | 255 | 618 | 1.05e-105 | 343 |
MS.gene036252.t1 | MTR_2g104120 | 32.449 | 641 | 324 | 18 | 365 | 968 | 258 | 826 | 9.80e-80 | 278 |
MS.gene036252.t1 | MTR_2g047912 | 43.645 | 417 | 195 | 13 | 565 | 971 | 286 | 672 | 1.14e-77 | 268 |
MS.gene036252.t1 | MTR_1g066890 | 47.598 | 229 | 99 | 4 | 362 | 588 | 315 | 524 | 5.19e-59 | 219 |
MS.gene036252.t1 | MTR_1g066890 | 50.538 | 93 | 43 | 1 | 879 | 968 | 810 | 902 | 4.17e-19 | 93.6 |
MS.gene036252.t1 | MTR_2g104980 | 46.452 | 155 | 57 | 2 | 361 | 510 | 224 | 357 | 1.10e-38 | 150 |
MS.gene036252.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 365 | 547 | 272 | 453 | 5.77e-29 | 125 |
MS.gene036252.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 365 | 547 | 230 | 411 | 7.88e-29 | 124 |
MS.gene036252.t1 | MTR_6g005960 | 37.500 | 184 | 112 | 3 | 365 | 547 | 212 | 393 | 3.53e-27 | 119 |
MS.gene036252.t1 | MTR_7g113180 | 33.146 | 178 | 116 | 3 | 365 | 539 | 87 | 264 | 1.16e-24 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036252.t1 | AT3G09670 | 52.604 | 192 | 90 | 1 | 364 | 554 | 196 | 387 | 3.79e-60 | 219 |
MS.gene036252.t1 | AT3G09670 | 52.604 | 192 | 90 | 1 | 364 | 554 | 196 | 387 | 3.79e-60 | 219 |
MS.gene036252.t1 | AT5G02950 | 41.270 | 252 | 135 | 3 | 302 | 552 | 44 | 283 | 2.57e-53 | 198 |
MS.gene036252.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 885 | 966 | 542 | 623 | 1.49e-19 | 94.7 |
MS.gene036252.t1 | AT5G02950 | 41.270 | 252 | 135 | 3 | 302 | 552 | 44 | 283 | 2.57e-53 | 198 |
MS.gene036252.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 885 | 966 | 542 | 623 | 1.49e-19 | 94.7 |
MS.gene036252.t1 | AT3G54760 | 34.877 | 324 | 162 | 8 | 668 | 984 | 472 | 753 | 6.87e-42 | 165 |
MS.gene036252.t1 | AT3G54760 | 34.877 | 324 | 162 | 8 | 668 | 984 | 503 | 784 | 1.19e-41 | 165 |
MS.gene036252.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 365 | 543 | 125 | 303 | 3.63e-29 | 126 |
MS.gene036252.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 365 | 543 | 125 | 303 | 3.97e-29 | 126 |
MS.gene036252.t1 | AT5G27650 | 33.880 | 183 | 108 | 4 | 365 | 539 | 171 | 348 | 5.58e-22 | 103 |
MS.gene036252.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 365 | 476 | 133 | 244 | 2.04e-21 | 101 |
MS.gene036252.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 365 | 476 | 133 | 244 | 2.17e-21 | 101 |
MS.gene036252.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 362 | 639 | 58 | 329 | 3.15e-19 | 93.6 |
MS.gene036252.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 362 | 639 | 58 | 329 | 3.15e-19 | 93.6 |
MS.gene036252.t1 | AT3G48187 | 26.562 | 192 | 116 | 5 | 365 | 551 | 106 | 277 | 1.76e-12 | 72.0 |
Find 239 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTATTTGGTAGCATATTA+TGG | 0.149078 | 1.3:+52418752 | MS.gene036252:CDS |
AGCAATAGTCTTTCGTTTCT+TGG | 0.161677 | 1.3:-52419488 | None:intergenic |
GTCAAAAGACGGGTCGAATT+TGG | 0.171080 | 1.3:+52418899 | MS.gene036252:CDS |
GCTAAACAGTTCAACATATT+TGG | 0.174863 | 1.3:+52420390 | MS.gene036252:CDS |
TGGAGGAGTTGAAGGGTTTC+AGG | 0.180597 | 1.3:+52417773 | MS.gene036252:CDS |
GGAGTTTCTTCTCTGATTTC+AGG | 0.181757 | 1.3:+52419869 | MS.gene036252:CDS |
ACAAAACAATCATTTAAAAT+TGG | 0.214750 | 1.3:+52419583 | MS.gene036252:CDS |
TTCTGAGTCTCCTCAAAATT+AGG | 0.233682 | 1.3:-52419736 | None:intergenic |
GGACTTGGTAGTTGGGGTTT+TGG | 0.236358 | 1.3:+52417647 | MS.gene036252:CDS |
TTGCCCGAATTACAATATTT+TGG | 0.236931 | 1.3:+52419181 | MS.gene036252:CDS |
CCCTCTATGTTGAAATATTC+TGG | 0.237737 | 1.3:+52419646 | MS.gene036252:CDS |
GCTTGCATTCTACCGGTTAA+AGG | 0.242276 | 1.3:+52419147 | MS.gene036252:CDS |
TTTATCAGTATCATTAATTA+AGG | 0.246050 | 1.3:-52419227 | None:intergenic |
TTCTGTGAATGATCTGGTTT+GGG | 0.252633 | 1.3:+52418640 | MS.gene036252:CDS |
TCTGTCTCAGATTCCTTTAA+AGG | 0.257461 | 1.3:-52420294 | None:intergenic |
GGAGGAGGTAGATGAAATAT+TGG | 0.257832 | 1.3:+52418091 | MS.gene036252:CDS |
AAAGCCTCCAGTTGGAAAAT+TGG | 0.259834 | 1.3:-52419089 | None:intergenic |
TATAGTTTCTTGAATGTTAT+AGG | 0.262506 | 1.3:+52419847 | MS.gene036252:CDS |
TCACAGGAAGAGAAGGAAAT+TGG | 0.277243 | 1.3:+52418353 | MS.gene036252:CDS |
CTGCAAAAGTTGGCACTAAA+AGG | 0.284041 | 1.3:+52419935 | MS.gene036252:CDS |
ACCTCCAAAATATTGTAATT+CGG | 0.295491 | 1.3:-52419185 | None:intergenic |
TCAGACAAAGAGAAGGAAAT+TGG | 0.297811 | 1.3:+52418509 | MS.gene036252:CDS |
GCCGATGCGCAAGCTGCTTT+CGG | 0.300794 | 1.3:+52420363 | MS.gene036252:CDS |
TTCTTCTGCCTTTCACCCTT+GGG | 0.310129 | 1.3:-52419528 | None:intergenic |
TTTCTTCTGCCTTTCACCCT+TGG | 0.316743 | 1.3:-52419529 | None:intergenic |
TCATCAAAGTCAAATGTTTC+AGG | 0.317862 | 1.3:-52419982 | None:intergenic |
ATCATTGTGGCCAGTGATCC+TGG | 0.318358 | 1.3:+52419898 | MS.gene036252:CDS |
CCTCCAAAATATTGTAATTC+GGG | 0.319818 | 1.3:-52419184 | None:intergenic |
AACATTTGACTTTGATGATC+TGG | 0.323353 | 1.3:+52419987 | MS.gene036252:CDS |
GATGAGTGATGATGTTATTC+AGG | 0.328343 | 1.3:+52418442 | MS.gene036252:CDS |
TGTTCCAGGAAACAGTATTT+TGG | 0.330526 | 1.3:+52420132 | MS.gene036252:CDS |
TGATGAGTGGTGATGTTATT+CGG | 0.331158 | 1.3:+52418282 | MS.gene036252:CDS |
GAGTTGGATGGAGGGAAAAT+TGG | 0.331559 | 1.3:+52418149 | MS.gene036252:CDS |
TCTGAGTCTCCTCAAAATTA+GGG | 0.332007 | 1.3:-52419735 | None:intergenic |
GCTACCAAAATACTGTTTCC+TGG | 0.332567 | 1.3:-52420136 | None:intergenic |
GCTATTTGGTAGCATATTAT+GGG | 0.350097 | 1.3:+52418753 | MS.gene036252:CDS |
TATAGAGGTGGAGGGATCTA+TGG | 0.352355 | 1.3:+52417605 | MS.gene036252:CDS |
ATCTTGTCATAAGTATCTTT+AGG | 0.354335 | 1.3:-52418941 | None:intergenic |
TTATGACAAGATTAAACTTC+AGG | 0.357337 | 1.3:+52418952 | MS.gene036252:CDS |
TTTCTGTGAATGATCTGGTT+TGG | 0.357507 | 1.3:+52418639 | MS.gene036252:CDS |
GGTCTAAGCTGAAGTCCTTT+AGG | 0.367030 | 1.3:+52418801 | MS.gene036252:CDS |
ATAGTTTCTTGAATGTTATA+GGG | 0.367131 | 1.3:+52419848 | MS.gene036252:CDS |
CAAGTTGTTGGGTCATTAGA+AGG | 0.367450 | 1.3:+52417993 | MS.gene036252:CDS |
CATGTCCCCATGAAGAGTTC+AGG | 0.376926 | 1.3:+52418593 | MS.gene036252:CDS |
TCAAAAGACGGGTCGAATTT+GGG | 0.377860 | 1.3:+52418900 | MS.gene036252:CDS |
TTCAGGGTTCTCAAGCTGTT+GGG | 0.378938 | 1.3:+52417790 | MS.gene036252:CDS |
CTGAGAAGGACTTGGTAGTT+GGG | 0.388392 | 1.3:+52417640 | MS.gene036252:CDS |
CGAGAATGAGGTAGTTGAGT+TGG | 0.391904 | 1.3:+52418022 | MS.gene036252:CDS |
AAAGATGTGGGTCTTACTAT+TGG | 0.392531 | 1.3:+52417753 | MS.gene036252:CDS |
CTTGCATTCTACCGGTTAAA+GGG | 0.397273 | 1.3:+52419148 | MS.gene036252:CDS |
AAGTATTCCATAAGCTTCTC+AGG | 0.401659 | 1.3:-52419055 | None:intergenic |
CTTACTATTGGAGGAGTTGA+AGG | 0.406138 | 1.3:+52417765 | MS.gene036252:CDS |
TTTCAGGGTTCTCAAGCTGT+TGG | 0.406912 | 1.3:+52417789 | MS.gene036252:CDS |
TGAGAAGGAGGTAGTTGAGT+TGG | 0.407945 | 1.3:+52417830 | MS.gene036252:CDS |
TAATCACTGTGGGTAGAATC+TGG | 0.412595 | 1.3:-52419418 | None:intergenic |
GATGAGTGGTGATGTTATTC+GGG | 0.414067 | 1.3:+52418283 | MS.gene036252:CDS |
AACTGGAGGCTTTGATCGAT+TGG | 0.414850 | 1.3:+52419099 | MS.gene036252:CDS |
GAGGAGGAGGAGGATTGTCT+AGG | 0.418908 | 1.3:-52417566 | None:intergenic |
AGGGTTGCTAGCCAACTTAC+TGG | 0.421445 | 1.3:+52419619 | MS.gene036252:CDS |
CTTGCGACGGGATTGGTTTG+TGG | 0.423101 | 1.3:-52419326 | None:intergenic |
AGGAGGAGGAGGATTGTCTA+GGG | 0.423666 | 1.3:-52417565 | None:intergenic |
AGTTATTGATGGCGAAGAAC+AGG | 0.424524 | 1.3:+52418226 | MS.gene036252:CDS |
ATTTAATGATGCCGAAGAAC+AGG | 0.424640 | 1.3:+52418541 | MS.gene036252:CDS |
AAGAAACTATAATCTCCCTT+TGG | 0.428080 | 1.3:-52419835 | None:intergenic |
AAAATACTGTTTCCTGGAAC+AGG | 0.428323 | 1.3:-52420130 | None:intergenic |
GAAGGGGCGCGCTCATAGTC+TGG | 0.428448 | 1.3:-52420069 | None:intergenic |
GGAGACAAAGAAGTTATTGA+TGG | 0.433349 | 1.3:+52418215 | MS.gene036252:CDS |
AGTTGGTATTTCTGAGAAGA+TGG | 0.434726 | 1.3:+52418325 | MS.gene036252:CDS |
TTCGTTTCTTGGAAAGGATA+GGG | 0.437828 | 1.3:-52419477 | None:intergenic |
AATGATCAAGATGCAATTCC+TGG | 0.437834 | 1.3:-52420491 | None:intergenic |
AGGACAGATATTTGATCCTT+CGG | 0.441893 | 1.3:+52418691 | MS.gene036252:CDS |
AGGTGGAGGGATCTATGGTT+AGG | 0.442305 | 1.3:+52417610 | MS.gene036252:CDS |
TTGAAGATTCTCAAGTTGTT+GGG | 0.443017 | 1.3:+52417982 | MS.gene036252:CDS |
AAAGATGTGACTGTTGCTAT+TGG | 0.443129 | 1.3:+52417945 | MS.gene036252:CDS |
TGAAGCAACTTTGAAAACAT+TGG | 0.448948 | 1.3:+52418052 | MS.gene036252:CDS |
CATAAGCTTCTCAGGTGAAA+AGG | 0.450721 | 1.3:-52419047 | None:intergenic |
TCAGACAAAGAGAAGGAAGT+TGG | 0.451478 | 1.3:+52418194 | MS.gene036252:CDS |
TTTGAAGATTCTCAAGTTGT+TGG | 0.451500 | 1.3:+52417981 | MS.gene036252:CDS |
GATTCGACAAGAGCCAAGTT+TGG | 0.453596 | 1.3:+52418991 | MS.gene036252:CDS |
GAATCTGGATTCCCATTGGC+TGG | 0.453644 | 1.3:-52419403 | None:intergenic |
GTTTACGCTTGCGACGGGAT+TGG | 0.454998 | 1.3:-52419333 | None:intergenic |
GGAGGAGTTGAAGGGTTTCA+GGG | 0.455076 | 1.3:+52417774 | MS.gene036252:CDS |
TGAAGGTAAGAGTGAGAAGG+AGG | 0.456381 | 1.3:+52417818 | MS.gene036252:CDS |
GATTTCTTTCCCAGGATCAC+TGG | 0.460398 | 1.3:-52419908 | None:intergenic |
TCCAGAATATTTCAACATAG+AGG | 0.462499 | 1.3:-52419647 | None:intergenic |
CTACGTGTATAAACATGAAC+AGG | 0.463107 | 1.3:-52420105 | None:intergenic |
AATGGTGATCAAACTGGAAC+CGG | 0.464649 | 1.3:+52419292 | MS.gene036252:CDS |
GAGTCAGATGAAGGGAAAGT+TGG | 0.469831 | 1.3:+52418308 | MS.gene036252:CDS |
AGTTAATGACGCCGATGAAA+AGG | 0.470521 | 1.3:+52418385 | MS.gene036252:CDS |
AAGTTCAAAACAAGTTCAGC+AGG | 0.470527 | 1.3:-52420210 | None:intergenic |
AGCAAGAGTAACCCTTTAAC+CGG | 0.471478 | 1.3:-52419159 | None:intergenic |
GATCCCTCCACCTCTATAGT+AGG | 0.472001 | 1.3:-52417600 | None:intergenic |
TCAGGAGATTCACCTATGGC+TGG | 0.473273 | 1.3:-52419964 | None:intergenic |
TCCTCCTCCTCCTACTATAG+AGG | 0.474261 | 1.3:+52417590 | MS.gene036252:CDS |
ACTGAGAAGGACTTGGTAGT+TGG | 0.475703 | 1.3:+52417639 | MS.gene036252:CDS |
GAGAATGAGGTAGTTGAGTT+GGG | 0.475736 | 1.3:+52418023 | MS.gene036252:CDS |
ATTCAGGTTGAGTCAGATGA+AGG | 0.475737 | 1.3:+52418458 | MS.gene036252:CDS |
ACCTCTATAGTAGGAGGAGG+AGG | 0.475958 | 1.3:-52417591 | None:intergenic |
AGAAGCCATCCATGGTGGCC+AGG | 0.480090 | 1.3:+52418671 | MS.gene036252:CDS |
TGAGAAGATGGATGATTCAC+AGG | 0.480867 | 1.3:+52418337 | MS.gene036252:CDS |
CTCAGCTGCTTGCATTCTAC+CGG | 0.481107 | 1.3:+52419140 | MS.gene036252:CDS |
TTCAGGTTGTTGAAAACTGT+GGG | 0.482036 | 1.3:+52418969 | MS.gene036252:CDS |
TAGTCTTTCGTTTCTTGGAA+AGG | 0.484292 | 1.3:-52419483 | None:intergenic |
TTCTCATCTATATAACCAGC+AGG | 0.485307 | 1.3:-52420183 | None:intergenic |
GTTATTTAAGCTTGTTTCTG+AGG | 0.490022 | 1.3:-52420253 | None:intergenic |
TCCTCCTACTATAGAGGTGG+AGG | 0.496765 | 1.3:+52417596 | MS.gene036252:CDS |
ATAAGAGAAATGTGACCTAA+AGG | 0.499413 | 1.3:-52418816 | None:intergenic |
GGAACGTACGCGTGGAATGA+AGG | 0.499626 | 1.3:+52418779 | MS.gene036252:CDS |
ATACACGTAGGTCCTGTTCC+AGG | 0.500440 | 1.3:+52420118 | MS.gene036252:CDS |
ATTCGGGTTGAGTCAGATGA+AGG | 0.500442 | 1.3:+52418299 | MS.gene036252:CDS |
TTTGATGGGTTAGTTGAGGA+GGG | 0.502003 | 1.3:+52417921 | MS.gene036252:CDS |
ATCAGTACGCTGACGTCCCA+AGG | 0.502539 | 1.3:+52419512 | MS.gene036252:CDS |
GATTCTGATTTGTGCATACA+AGG | 0.502676 | 1.3:+52417669 | MS.gene036252:CDS |
CTCCTCAAAATTAGGGGAGA+AGG | 0.503090 | 1.3:-52419728 | None:intergenic |
TCTCTGATGGCAGATGGTAA+TGG | 0.503504 | 1.3:+52419676 | MS.gene036252:CDS |
GACCACATTAAGTTCAACAT+TGG | 0.504411 | 1.3:-52420514 | None:intergenic |
AAGGAGGTAGTTGAGTTGGA+TGG | 0.505202 | 1.3:+52417834 | MS.gene036252:CDS |
GATGTGGGTCTTACTATTGG+AGG | 0.505356 | 1.3:+52417756 | MS.gene036252:CDS |
GCCGAAAGCAGCTTGCGCAT+CGG | 0.506845 | 1.3:-52420364 | None:intergenic |
ATTATGTTTACGCTTGCGAC+GGG | 0.508564 | 1.3:-52419338 | None:intergenic |
GTTACTCGGGTTGAGTTGGA+TGG | 0.512140 | 1.3:+52418137 | MS.gene036252:CDS |
GAGTGCTGTAGATTCTGCTT+TGG | 0.512585 | 1.3:+52418871 | MS.gene036252:CDS |
CGTAAACATAATCTAAAGGT+TGG | 0.517378 | 1.3:+52419349 | MS.gene036252:CDS |
ATGTCCCCATGAAGAGTTCA+GGG | 0.518410 | 1.3:+52418594 | MS.gene036252:CDS |
CAATAAGTGACAATGTTACT+CGG | 0.520556 | 1.3:+52418123 | MS.gene036252:CDS |
TTTGCTATCTTTACTTCAGT+GGG | 0.521231 | 1.3:+52419801 | MS.gene036252:CDS |
GAAATCTTACCTGCAAAAGT+TGG | 0.521602 | 1.3:+52419925 | MS.gene036252:CDS |
TTGGTAGCATATTATGGGGA+TGG | 0.521750 | 1.3:+52418758 | MS.gene036252:CDS |
TCTGTCCTGGCCACCATGGA+TGG | 0.523479 | 1.3:-52418676 | None:intergenic |
TTTCGTTTCTTGGAAAGGAT+AGG | 0.527147 | 1.3:-52419478 | None:intergenic |
ATTTGCTATCTTTACTTCAG+TGG | 0.528385 | 1.3:+52419800 | MS.gene036252:CDS |
GCAATGGCCTCATCATCATT+CGG | 0.528387 | 1.3:-52419442 | None:intergenic |
AGGAAGCAAGCGGGCAAGAG+TGG | 0.530153 | 1.3:+52420326 | MS.gene036252:CDS |
ATGAGGTAGTTGAGTTGGGT+GGG | 0.530499 | 1.3:+52418027 | MS.gene036252:CDS |
GCAGGTAAGATTTCTTTCCC+AGG | 0.531761 | 1.3:-52419916 | None:intergenic |
TCAACTCTATGTACCAAACT+TGG | 0.533287 | 1.3:-52419004 | None:intergenic |
GAACGTACGCGTGGAATGAA+GGG | 0.534286 | 1.3:+52418780 | MS.gene036252:CDS |
TCCTCCTCCTACTATAGAGG+TGG | 0.534360 | 1.3:+52417593 | MS.gene036252:CDS |
TTATTTAAGCTTGTTTCTGA+GGG | 0.535145 | 1.3:-52420252 | None:intergenic |
TTTACTTCAGTGGGTAGCAC+AGG | 0.536694 | 1.3:+52419810 | MS.gene036252:CDS |
CAAGCGTAAACATAATCTAA+AGG | 0.537630 | 1.3:+52419345 | MS.gene036252:CDS |
GGATGATTCACAGGAAGAGA+AGG | 0.537658 | 1.3:+52418346 | MS.gene036252:CDS |
GAGTCAGATGAAGGGAAAGT+TGG | 0.538889 | 1.3:+52418467 | MS.gene036252:CDS |
GTTGCTATTGGAGGAACTGT+AGG | 0.539624 | 1.3:+52417957 | MS.gene036252:CDS |
TCTATAGTAGGAGGAGGAGG+AGG | 0.539772 | 1.3:-52417588 | None:intergenic |
CTCGGGTTGAGTTGGATGGA+GGG | 0.541287 | 1.3:+52418141 | MS.gene036252:CDS |
GGTGGAGGGATCTATGGTTA+GGG | 0.541957 | 1.3:+52417611 | MS.gene036252:CDS |
TGAGCAGAAGAAGAAGGAGG+AGG | 0.542045 | 1.3:+52418076 | MS.gene036252:CDS |
TGAGAAGGACTTGGTAGTTG+GGG | 0.543115 | 1.3:+52417641 | MS.gene036252:CDS |
AATGAGGTAGTTGAGTTGGG+TGG | 0.543283 | 1.3:+52418026 | MS.gene036252:CDS |
CAATGTTACTCGGGTTGAGT+TGG | 0.544154 | 1.3:+52418133 | MS.gene036252:CDS |
CACTCGGTGAGTAGTTAAGC+TGG | 0.544989 | 1.3:-52420431 | None:intergenic |
TTGCTATTGGAGGAACTGTA+GGG | 0.545263 | 1.3:+52417958 | MS.gene036252:CDS |
TCAGGGAAAAGTCGTAGAGA+AGG | 0.545278 | 1.3:+52418611 | MS.gene036252:CDS |
GAAGGATCAAATATCTGTCC+TGG | 0.546699 | 1.3:-52418689 | None:intergenic |
TCCTCAAAATTAGGGGAGAA+GGG | 0.547058 | 1.3:-52419727 | None:intergenic |
TTGCATAAAGATGGTGTTTG+TGG | 0.549648 | 1.3:+52417870 | MS.gene036252:CDS |
GAAAAGGTAAAAGCATCAGC+TGG | 0.551523 | 1.3:+52418401 | MS.gene036252:CDS |
GGATGATACTGAGAAGGACT+TGG | 0.552752 | 1.3:+52417632 | MS.gene036252:CDS |
GCTTGTTAGAACCAGCCAAT+GGG | 0.554154 | 1.3:+52419392 | MS.gene036252:CDS |
TCTAGAGATGAAAACTCTGT+AGG | 0.554887 | 1.3:-52419775 | None:intergenic |
TTCCAATGTTGAACTTAATG+TGG | 0.555710 | 1.3:+52420512 | MS.gene036252:CDS |
GGGTTGCTAGCCAACTTACT+GGG | 0.555983 | 1.3:+52419620 | MS.gene036252:CDS |
AAATTGGCGATTGTATCCGT+AGG | 0.556953 | 1.3:+52419599 | MS.gene036252:CDS |
TCTGAGACAGAAATTGATAG+AGG | 0.558240 | 1.3:+52420306 | MS.gene036252:CDS |
AGAAGGTAAGAGCGAGAATG+AGG | 0.560204 | 1.3:+52418010 | MS.gene036252:CDS |
GAAGCAACGTTGCATAAAGA+TGG | 0.562111 | 1.3:+52417861 | MS.gene036252:CDS |
TCGTTTCTTGGAAAGGATAG+GGG | 0.562588 | 1.3:-52419476 | None:intergenic |
GTTGAGGTGAATAACGATGT+TGG | 0.562738 | 1.3:+52417897 | MS.gene036252:CDS |
CCAGAATATTTCAACATAGA+GGG | 0.564536 | 1.3:-52419646 | None:intergenic |
GAATGATCTGGTTTGGGGCA+AGG | 0.565852 | 1.3:+52418646 | MS.gene036252:CDS |
GATGTGACTGTTGCTATTGG+AGG | 0.566838 | 1.3:+52417948 | MS.gene036252:CDS |
AAGACGGGTCGAATTTGGGC+TGG | 0.567552 | 1.3:+52418904 | MS.gene036252:CDS |
GCTGACGTCCCAAGGGTGAA+AGG | 0.569331 | 1.3:+52419520 | MS.gene036252:CDS |
TTTCAGGAATTCAATCATTG+TGG | 0.569656 | 1.3:+52419885 | MS.gene036252:CDS |
TAGAGGGCGACCCAGTAAGT+TGG | 0.571586 | 1.3:-52419630 | None:intergenic |
GAACAGGCAAAAGCTTCAGA+TGG | 0.571998 | 1.3:+52418242 | MS.gene036252:CDS |
ACTCGGGTTGAGTTGGATGG+AGG | 0.572931 | 1.3:+52418140 | MS.gene036252:CDS |
GTGGGTAGCACAGGAACCAA+AGG | 0.573631 | 1.3:+52419819 | MS.gene036252:CDS |
CTTCAGGTTGTTGAAAACTG+TGG | 0.573927 | 1.3:+52418968 | MS.gene036252:CDS |
ATTGGATGAGCAGAAGAAGA+AGG | 0.575488 | 1.3:+52418070 | MS.gene036252:CDS |
TGTTTCAGGAGATTCACCTA+TGG | 0.576258 | 1.3:-52419968 | None:intergenic |
GAACAGGTAAAAGCATCAGA+TGG | 0.576894 | 1.3:+52418557 | MS.gene036252:CDS |
TTCTGGAGACACTTCTCTGA+TGG | 0.577268 | 1.3:+52419663 | MS.gene036252:CDS |
TCATTGTGGCCAGTGATCCT+GGG | 0.577427 | 1.3:+52419899 | MS.gene036252:CDS |
AATTGGCGATTGTATCCGTA+GGG | 0.579455 | 1.3:+52419600 | MS.gene036252:CDS |
AATCGATCAAAGCCTCCAGT+TGG | 0.585502 | 1.3:-52419097 | None:intergenic |
TCCTTCGGATGCATCTGCGC+AGG | 0.588537 | 1.3:+52418706 | MS.gene036252:CDS |
TTACTATTGGAGGAGTTGAA+GGG | 0.588873 | 1.3:+52417766 | MS.gene036252:CDS |
CTTTGGATGAAGTCAAAAGA+CGG | 0.588987 | 1.3:+52418888 | MS.gene036252:CDS |
CCCTCCACCTCTATAGTAGG+AGG | 0.589982 | 1.3:-52417597 | None:intergenic |
TGATGATTCAGACAAAGAGA+AGG | 0.590026 | 1.3:+52418187 | MS.gene036252:CDS |
AGCTTGTTAGAACCAGCCAA+TGG | 0.592127 | 1.3:+52419391 | MS.gene036252:CDS |
GATTGATTCAGACAAAGAGA+AGG | 0.593485 | 1.3:+52418502 | MS.gene036252:CDS |
CAGGGAAAAGTCGTAGAGAA+GGG | 0.596276 | 1.3:+52418612 | MS.gene036252:CDS |
AATAAGTGACAATGTTACTC+GGG | 0.596344 | 1.3:+52418124 | MS.gene036252:CDS |
TGCTGAGCTGAATCATGATG+TGG | 0.597423 | 1.3:+52417704 | MS.gene036252:CDS |
TGGTGTTTGTGGTAGTGTTG+AGG | 0.598048 | 1.3:+52417881 | MS.gene036252:CDS |
TTTGGATGAAGTCAAAAGAC+GGG | 0.598056 | 1.3:+52418889 | MS.gene036252:CDS |
GGTAGAATCTGGATTCCCAT+TGG | 0.599521 | 1.3:-52419407 | None:intergenic |
GACACTTCTCTGATGGCAGA+TGG | 0.600480 | 1.3:+52419670 | MS.gene036252:CDS |
TGGGTAGCACAGGAACCAAA+GGG | 0.603458 | 1.3:+52419820 | MS.gene036252:CDS |
GGTTAGGGATGATACTGAGA+AGG | 0.604612 | 1.3:+52417626 | MS.gene036252:CDS |
TCCACCTCTATAGTAGGAGG+AGG | 0.607795 | 1.3:-52417594 | None:intergenic |
AGTTCAAGAGGATAAAGATG+TGG | 0.609994 | 1.3:+52417740 | MS.gene036252:CDS |
CTATTTGGTAGCATATTATG+GGG | 0.612060 | 1.3:+52418754 | MS.gene036252:CDS |
AATTGATAGAGGAAGCAAGC+GGG | 0.613209 | 1.3:+52420317 | MS.gene036252:CDS |
ATCATTCGGATAATCACTGT+GGG | 0.613540 | 1.3:-52419428 | None:intergenic |
GCAAGGTGAGAAGCCATCCA+TGG | 0.614983 | 1.3:+52418663 | MS.gene036252:CDS |
GTTCAAGAGGATAAAGATGT+GGG | 0.615110 | 1.3:+52417741 | MS.gene036252:CDS |
GACACATGTTGCATGCAGAA+TGG | 0.617411 | 1.3:+52420012 | MS.gene036252:CDS |
GATTATGTTTACGCTTGCGA+CGG | 0.620559 | 1.3:-52419339 | None:intergenic |
GCCTGCGCAGATGCATCCGA+AGG | 0.622190 | 1.3:-52418707 | None:intergenic |
ATAAGTATCTTTAGGTACGC+AGG | 0.622403 | 1.3:-52418933 | None:intergenic |
AAAAGGAAGAAACCAGCCAT+AGG | 0.628089 | 1.3:+52419952 | MS.gene036252:CDS |
AAGCTTCTCAGGTGAAAAGG+AGG | 0.628731 | 1.3:-52419044 | None:intergenic |
TTCAGGTTGAGTCAGATGAA+GGG | 0.631536 | 1.3:+52418459 | MS.gene036252:CDS |
TAAGTTGGCTAGCAACCCTA+CGG | 0.637189 | 1.3:-52419615 | None:intergenic |
GTTCAAAACAAGTTCAGCAG+GGG | 0.637786 | 1.3:-52420208 | None:intergenic |
TCAGTACGCTGACGTCCCAA+GGG | 0.638239 | 1.3:+52419513 | MS.gene036252:CDS |
TTCGGGTTGAGTCAGATGAA+GGG | 0.639871 | 1.3:+52418300 | MS.gene036252:CDS |
TCTGTGAATGATCTGGTTTG+GGG | 0.640253 | 1.3:+52418641 | MS.gene036252:CDS |
CTGAGTCTCCTCAAAATTAG+GGG | 0.644036 | 1.3:-52419734 | None:intergenic |
AATATCTGTCCTGGCCACCA+TGG | 0.644606 | 1.3:-52418680 | None:intergenic |
ATTGGAGCTTACAACAGCGA+AGG | 0.645925 | 1.3:+52419117 | MS.gene036252:CDS |
TGATTATCCGAATGATGATG+AGG | 0.647957 | 1.3:+52419435 | MS.gene036252:CDS |
AGTTCAAAACAAGTTCAGCA+GGG | 0.652707 | 1.3:-52420209 | None:intergenic |
GAAGCTTTCAACAATGCACT+CGG | 0.655548 | 1.3:-52420447 | None:intergenic |
ATGGGGATGGAACGTACGCG+TGG | 0.660026 | 1.3:+52418771 | MS.gene036252:CDS |
CCTCCTACTATAGAGGTGGA+GGG | 0.660087 | 1.3:+52417597 | MS.gene036252:CDS |
CATCATTCGGATAATCACTG+TGG | 0.677313 | 1.3:-52419429 | None:intergenic |
AAGCAGAATCTACAGCACTC+CGG | 0.679557 | 1.3:-52418868 | None:intergenic |
GGATGAGCAGAAGAAGAAGG+AGG | 0.687283 | 1.3:+52418073 | MS.gene036252:CDS |
AGGTGAGAAGCCATCCATGG+TGG | 0.691278 | 1.3:+52418666 | MS.gene036252:CDS |
GTTGAGAAAGAAGTGATGAG+TGG | 0.695209 | 1.3:+52418269 | MS.gene036252:CDS |
GCTGAGCTGAATCATGATGT+GGG | 0.707525 | 1.3:+52417705 | MS.gene036252:CDS |
CTGTTCATGTTTATACACGT+AGG | 0.716902 | 1.3:+52420106 | MS.gene036252:CDS |
AAATTGATAGAGGAAGCAAG+CGG | 0.720495 | 1.3:+52420316 | MS.gene036252:CDS |
ATGCAATTCCTGGTCCTGTG+TGG | 0.729902 | 1.3:-52420481 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATCAGTATCATTAATTA+AGG | - | chr1.3:52419230-52419249 | None:intergenic | 15.0% |
!!! | AATAACATTTTTAAGCATTT+TGG | + | chr1.3:52420270-52420289 | MS.gene036252:CDS | 15.0% |
!!! | AATTTTAAATGATTGTTTTG+TGG | - | chr1.3:52419584-52419603 | None:intergenic | 15.0% |
!!! | ACAAAACAATCATTTAAAAT+TGG | + | chr1.3:52419583-52419602 | MS.gene036252:CDS | 15.0% |
!! | ACAATTCATACAAGTAAAAA+TGG | + | chr1.3:52419274-52419293 | MS.gene036252:CDS | 20.0% |
!! | ATAGTTTCTTGAATGTTATA+GGG | + | chr1.3:52419848-52419867 | MS.gene036252:CDS | 20.0% |
!! | TATAGTTTCTTGAATGTTAT+AGG | + | chr1.3:52419847-52419866 | MS.gene036252:CDS | 20.0% |
!! | TATTGAAAAGCAGAAAAATT+TGG | + | chr1.3:52418838-52418857 | MS.gene036252:CDS | 20.0% |
! | ACCTCCAAAATATTGTAATT+CGG | - | chr1.3:52419188-52419207 | None:intergenic | 25.0% |
! | ATCTTGTCATAAGTATCTTT+AGG | - | chr1.3:52418944-52418963 | None:intergenic | 25.0% |
! | TTATGACAAGATTAAACTTC+AGG | + | chr1.3:52418952-52418971 | MS.gene036252:CDS | 25.0% |
!!! | ATTACAATATTTTGGAGGTT+TGG | + | chr1.3:52419189-52419208 | MS.gene036252:CDS | 25.0% |
!!! | TTATTTAAGCTTGTTTCTGA+GGG | - | chr1.3:52420255-52420274 | None:intergenic | 25.0% |
!!! | TTTTAGAAAGAACTGCTATT+TGG | + | chr1.3:52418739-52418758 | MS.gene036252:CDS | 25.0% |
AAGAAACTATAATCTCCCTT+TGG | - | chr1.3:52419838-52419857 | None:intergenic | 30.0% | |
AATAAGTGACAATGTTACTC+GGG | + | chr1.3:52418124-52418143 | MS.gene036252:CDS | 30.0% | |
AGTAAAAATGGTGATCAAAC+TGG | + | chr1.3:52419286-52419305 | MS.gene036252:CDS | 30.0% | |
ATAAGAGAAATGTGACCTAA+AGG | - | chr1.3:52418819-52418838 | None:intergenic | 30.0% | |
CAAGCGTAAACATAATCTAA+AGG | + | chr1.3:52419345-52419364 | MS.gene036252:CDS | 30.0% | |
CAATAAGTGACAATGTTACT+CGG | + | chr1.3:52418123-52418142 | MS.gene036252:CDS | 30.0% | |
CCAGAATATTTCAACATAGA+GGG | - | chr1.3:52419649-52419668 | None:intergenic | 30.0% | |
CCTCCAAAATATTGTAATTC+GGG | - | chr1.3:52419187-52419206 | None:intergenic | 30.0% | |
CGTAAACATAATCTAAAGGT+TGG | + | chr1.3:52419349-52419368 | MS.gene036252:CDS | 30.0% | |
GCTAAACAGTTCAACATATT+TGG | + | chr1.3:52420390-52420409 | MS.gene036252:CDS | 30.0% | |
TCATCAAAGTCAAATGTTTC+AGG | - | chr1.3:52419985-52420004 | None:intergenic | 30.0% | |
TCCAGAATATTTCAACATAG+AGG | - | chr1.3:52419650-52419669 | None:intergenic | 30.0% | |
TTCCAATGTTGAACTTAATG+TGG | + | chr1.3:52420512-52420531 | MS.gene036252:CDS | 30.0% | |
TTTCAGGAATTCAATCATTG+TGG | + | chr1.3:52419885-52419904 | MS.gene036252:CDS | 30.0% | |
! | AACATTTGACTTTGATGATC+TGG | + | chr1.3:52419987-52420006 | MS.gene036252:CDS | 30.0% |
! | CTATTTGGTAGCATATTATG+GGG | + | chr1.3:52418754-52418773 | MS.gene036252:CDS | 30.0% |
! | GCTATTTGGTAGCATATTAT+GGG | + | chr1.3:52418753-52418772 | MS.gene036252:CDS | 30.0% |
! | TAAACATGAACAGGTTTTTC+TGG | - | chr1.3:52420099-52420118 | None:intergenic | 30.0% |
! | TAAGCATTTTGGACCTTTAA+AGG | + | chr1.3:52420281-52420300 | MS.gene036252:CDS | 30.0% |
! | TGAAGCAACTTTGAAAACAT+TGG | + | chr1.3:52418052-52418071 | MS.gene036252:CDS | 30.0% |
! | TGATGCTTTTACCTTTTCAT+CGG | - | chr1.3:52418399-52418418 | None:intergenic | 30.0% |
! | TGCTATTTGGTAGCATATTA+TGG | + | chr1.3:52418752-52418771 | MS.gene036252:CDS | 30.0% |
! | TTGAAGATTCTCAAGTTGTT+GGG | + | chr1.3:52417982-52418001 | MS.gene036252:CDS | 30.0% |
! | TTGCCCGAATTACAATATTT+TGG | + | chr1.3:52419181-52419200 | MS.gene036252:CDS | 30.0% |
! | TTTGAAGATTCTCAAGTTGT+TGG | + | chr1.3:52417981-52418000 | MS.gene036252:CDS | 30.0% |
! | TTTGCTATCTTTACTTCAGT+GGG | + | chr1.3:52419801-52419820 | MS.gene036252:CDS | 30.0% |
!! | AGAAAAATTTGGAAGTGTTC+CGG | + | chr1.3:52418849-52418868 | MS.gene036252:CDS | 30.0% |
!! | ATTTGCTATCTTTACTTCAG+TGG | + | chr1.3:52419800-52419819 | MS.gene036252:CDS | 30.0% |
!! | GTTATTTAAGCTTGTTTCTG+AGG | - | chr1.3:52420256-52420275 | None:intergenic | 30.0% |
!!! | AATAACGATGTTGGTTTTGA+TGG | + | chr1.3:52417906-52417925 | MS.gene036252:CDS | 30.0% |
!!! | ATAACGATGTTGGTTTTGAT+GGG | + | chr1.3:52417907-52417926 | MS.gene036252:CDS | 30.0% |
AAAATACTGTTTCCTGGAAC+AGG | - | chr1.3:52420133-52420152 | None:intergenic | 35.0% | |
AAAGATGTGACTGTTGCTAT+TGG | + | chr1.3:52417945-52417964 | MS.gene036252:CDS | 35.0% | |
AAAGATGTGGGTCTTACTAT+TGG | + | chr1.3:52417753-52417772 | MS.gene036252:CDS | 35.0% | |
AAATTGATAGAGGAAGCAAG+CGG | + | chr1.3:52420316-52420335 | MS.gene036252:CDS | 35.0% | |
AAGTATTCCATAAGCTTCTC+AGG | - | chr1.3:52419058-52419077 | None:intergenic | 35.0% | |
AAGTTCAAAACAAGTTCAGC+AGG | - | chr1.3:52420213-52420232 | None:intergenic | 35.0% | |
AATGATCAAGATGCAATTCC+TGG | - | chr1.3:52420494-52420513 | None:intergenic | 35.0% | |
AGCAATAGTCTTTCGTTTCT+TGG | - | chr1.3:52419491-52419510 | None:intergenic | 35.0% | |
AGGACAGATATTTGATCCTT+CGG | + | chr1.3:52418691-52418710 | MS.gene036252:CDS | 35.0% | |
AGGGGAAAAAAGATTAGCAA+TGG | - | chr1.3:52419461-52419480 | None:intergenic | 35.0% | |
AGTTCAAAACAAGTTCAGCA+GGG | - | chr1.3:52420212-52420231 | None:intergenic | 35.0% | |
AGTTCAAGAGGATAAAGATG+TGG | + | chr1.3:52417740-52417759 | MS.gene036252:CDS | 35.0% | |
ATAAGTATCTTTAGGTACGC+AGG | - | chr1.3:52418936-52418955 | None:intergenic | 35.0% | |
ATCATTCGGATAATCACTGT+GGG | - | chr1.3:52419431-52419450 | None:intergenic | 35.0% | |
ATTTAATGATGCCGAAGAAC+AGG | + | chr1.3:52418541-52418560 | MS.gene036252:CDS | 35.0% | |
CCCTCTATGTTGAAATATTC+TGG | + | chr1.3:52419646-52419665 | MS.gene036252:CDS | 35.0% | |
CTACGTGTATAAACATGAAC+AGG | - | chr1.3:52420108-52420127 | None:intergenic | 35.0% | |
CTGTTCATGTTTATACACGT+AGG | + | chr1.3:52420106-52420125 | MS.gene036252:CDS | 35.0% | |
CTTTGGATGAAGTCAAAAGA+CGG | + | chr1.3:52418888-52418907 | MS.gene036252:CDS | 35.0% | |
GAAATCTTACCTGCAAAAGT+TGG | + | chr1.3:52419925-52419944 | MS.gene036252:CDS | 35.0% | |
GACCACATTAAGTTCAACAT+TGG | - | chr1.3:52420517-52420536 | None:intergenic | 35.0% | |
GGAGACAAAGAAGTTATTGA+TGG | + | chr1.3:52418215-52418234 | MS.gene036252:CDS | 35.0% | |
GTTCAAGAGGATAAAGATGT+GGG | + | chr1.3:52417741-52417760 | MS.gene036252:CDS | 35.0% | |
TAGTCTTTCGTTTCTTGGAA+AGG | - | chr1.3:52419486-52419505 | None:intergenic | 35.0% | |
TCAACTCTATGTACCAAACT+TGG | - | chr1.3:52419007-52419026 | None:intergenic | 35.0% | |
TCAGACAAAGAGAAGGAAAT+TGG | + | chr1.3:52418509-52418528 | MS.gene036252:CDS | 35.0% | |
TCTAGAGATGAAAACTCTGT+AGG | - | chr1.3:52419778-52419797 | None:intergenic | 35.0% | |
TCTGAGTCTCCTCAAAATTA+GGG | - | chr1.3:52419738-52419757 | None:intergenic | 35.0% | |
TCTGTCTCAGATTCCTTTAA+AGG | - | chr1.3:52420297-52420316 | None:intergenic | 35.0% | |
TGATGATTCAGACAAAGAGA+AGG | + | chr1.3:52418187-52418206 | MS.gene036252:CDS | 35.0% | |
TTACTATTGGAGGAGTTGAA+GGG | + | chr1.3:52417766-52417785 | MS.gene036252:CDS | 35.0% | |
TTCGTTTCTTGGAAAGGATA+GGG | - | chr1.3:52419480-52419499 | None:intergenic | 35.0% | |
TTCTCATCTATATAACCAGC+AGG | - | chr1.3:52420186-52420205 | None:intergenic | 35.0% | |
TTCTGAGTCTCCTCAAAATT+AGG | - | chr1.3:52419739-52419758 | None:intergenic | 35.0% | |
TTGCATAAAGATGGTGTTTG+TGG | + | chr1.3:52417870-52417889 | MS.gene036252:CDS | 35.0% | |
TTTCGTTTCTTGGAAAGGAT+AGG | - | chr1.3:52419481-52419500 | None:intergenic | 35.0% | |
TTTCTGTGAATGATCTGGTT+TGG | + | chr1.3:52418639-52418658 | MS.gene036252:CDS | 35.0% | |
TTTGGATGAAGTCAAAAGAC+GGG | + | chr1.3:52418889-52418908 | MS.gene036252:CDS | 35.0% | |
! | AGTTGGTATTTCTGAGAAGA+TGG | + | chr1.3:52418325-52418344 | MS.gene036252:CDS | 35.0% |
! | ATATAACCAGCAGGTTTTTC+AGG | - | chr1.3:52420177-52420196 | None:intergenic | 35.0% |
! | GAAGTTTTCTGTGAATGATC+TGG | + | chr1.3:52418634-52418653 | MS.gene036252:CDS | 35.0% |
! | GATGAGTGATGATGTTATTC+AGG | + | chr1.3:52418442-52418461 | MS.gene036252:CDS | 35.0% |
! | GATTCTGATTTGTGCATACA+AGG | + | chr1.3:52417669-52417688 | MS.gene036252:CDS | 35.0% |
! | GATTGATTCAGACAAAGAGA+AGG | + | chr1.3:52418502-52418521 | MS.gene036252:CDS | 35.0% |
! | GCTTTATCCAATTTTCCAAC+TGG | + | chr1.3:52419082-52419101 | MS.gene036252:CDS | 35.0% |
! | TCTGAGACAGAAATTGATAG+AGG | + | chr1.3:52420306-52420325 | MS.gene036252:CDS | 35.0% |
! | TGATGAGTGGTGATGTTATT+CGG | + | chr1.3:52418282-52418301 | MS.gene036252:CDS | 35.0% |
! | TGATGCTTTTACCTGTTCTT+CGG | - | chr1.3:52418555-52418574 | None:intergenic | 35.0% |
! | TGATTATCCGAATGATGATG+AGG | + | chr1.3:52419435-52419454 | MS.gene036252:CDS | 35.0% |
! | TGTTCCAGGAAACAGTATTT+TGG | + | chr1.3:52420132-52420151 | MS.gene036252:CDS | 35.0% |
! | TTATCCAATTTTCCAACTGG+AGG | + | chr1.3:52419085-52419104 | MS.gene036252:CDS | 35.0% |
! | TTCTGTGAATGATCTGGTTT+GGG | + | chr1.3:52418640-52418659 | MS.gene036252:CDS | 35.0% |
!! | AATCATGATGTGGGTTTTGA+TGG | + | chr1.3:52417714-52417733 | MS.gene036252:CDS | 35.0% |
!! | ATCATGATGTGGGTTTTGAT+GGG | + | chr1.3:52417715-52417734 | MS.gene036252:CDS | 35.0% |
!! | CCCGAATTACAATATTTTGG+AGG | + | chr1.3:52419184-52419203 | MS.gene036252:CDS | 35.0% |
!! | TGTTTTGAACTTTGCTGACT+TGG | + | chr1.3:52420221-52420240 | MS.gene036252:CDS | 35.0% |
!! | TTCAGGTTGTTGAAAACTGT+GGG | + | chr1.3:52418969-52418988 | MS.gene036252:CDS | 35.0% |
!! | TTTTGAAGGTAAGAGTGAGA+AGG | + | chr1.3:52417815-52417834 | MS.gene036252:CDS | 35.0% |
AAAAGGAAGAAACCAGCCAT+AGG | + | chr1.3:52419952-52419971 | MS.gene036252:CDS | 40.0% | |
AAAGCCTCCAGTTGGAAAAT+TGG | - | chr1.3:52419092-52419111 | None:intergenic | 40.0% | |
AAATTGGCGATTGTATCCGT+AGG | + | chr1.3:52419599-52419618 | MS.gene036252:CDS | 40.0% | |
AATGGTGATCAAACTGGAAC+CGG | + | chr1.3:52419292-52419311 | MS.gene036252:CDS | 40.0% | |
AATTGATAGAGGAAGCAAGC+GGG | + | chr1.3:52420317-52420336 | MS.gene036252:CDS | 40.0% | |
AATTGGCGATTGTATCCGTA+GGG | + | chr1.3:52419600-52419619 | MS.gene036252:CDS | 40.0% | |
AGCAAGAGTAACCCTTTAAC+CGG | - | chr1.3:52419162-52419181 | None:intergenic | 40.0% | |
AGTTAATGACGCCGATGAAA+AGG | + | chr1.3:52418385-52418404 | MS.gene036252:CDS | 40.0% | |
ATTATGTTTACGCTTGCGAC+GGG | - | chr1.3:52419341-52419360 | None:intergenic | 40.0% | |
ATTGGATGAGCAGAAGAAGA+AGG | + | chr1.3:52418070-52418089 | MS.gene036252:CDS | 40.0% | |
CAAGTTGTTGGGTCATTAGA+AGG | + | chr1.3:52417993-52418012 | MS.gene036252:CDS | 40.0% | |
CATAAGCTTCTCAGGTGAAA+AGG | - | chr1.3:52419050-52419069 | None:intergenic | 40.0% | |
CATCATTCGGATAATCACTG+TGG | - | chr1.3:52419432-52419451 | None:intergenic | 40.0% | |
CTGAGTCTCCTCAAAATTAG+GGG | - | chr1.3:52419737-52419756 | None:intergenic | 40.0% | |
CTGCAAAAGTTGGCACTAAA+AGG | + | chr1.3:52419935-52419954 | MS.gene036252:CDS | 40.0% | |
CTTACTATTGGAGGAGTTGA+AGG | + | chr1.3:52417765-52417784 | MS.gene036252:CDS | 40.0% | |
GAAGCAACGTTGCATAAAGA+TGG | + | chr1.3:52417861-52417880 | MS.gene036252:CDS | 40.0% | |
GAAGCTTTCAACAATGCACT+CGG | - | chr1.3:52420450-52420469 | None:intergenic | 40.0% | |
GAAGGATCAAATATCTGTCC+TGG | - | chr1.3:52418692-52418711 | None:intergenic | 40.0% | |
GAGAATGAGGTAGTTGAGTT+GGG | + | chr1.3:52418023-52418042 | MS.gene036252:CDS | 40.0% | |
GATTATGTTTACGCTTGCGA+CGG | - | chr1.3:52419342-52419361 | None:intergenic | 40.0% | |
GCTACCAAAATACTGTTTCC+TGG | - | chr1.3:52420139-52420158 | None:intergenic | 40.0% | |
GGAGGAGGTAGATGAAATAT+TGG | + | chr1.3:52418091-52418110 | MS.gene036252:CDS | 40.0% | |
GGAGTTTCTTCTCTGATTTC+AGG | + | chr1.3:52419869-52419888 | MS.gene036252:CDS | 40.0% | |
GTTCAAAACAAGTTCAGCAG+GGG | - | chr1.3:52420211-52420230 | None:intergenic | 40.0% | |
GTTGAGAAAGAAGTGATGAG+TGG | + | chr1.3:52418269-52418288 | MS.gene036252:CDS | 40.0% | |
GTTGAGGTGAATAACGATGT+TGG | + | chr1.3:52417897-52417916 | MS.gene036252:CDS | 40.0% | |
TAATCACTGTGGGTAGAATC+TGG | - | chr1.3:52419421-52419440 | None:intergenic | 40.0% | |
TCAAAAGACGGGTCGAATTT+GGG | + | chr1.3:52418900-52418919 | MS.gene036252:CDS | 40.0% | |
TCACAGGAAGAGAAGGAAAT+TGG | + | chr1.3:52418353-52418372 | MS.gene036252:CDS | 40.0% | |
TCAGACAAAGAGAAGGAAGT+TGG | + | chr1.3:52418194-52418213 | MS.gene036252:CDS | 40.0% | |
TCCTCAAAATTAGGGGAGAA+GGG | - | chr1.3:52419730-52419749 | None:intergenic | 40.0% | |
TCGTTTCTTGGAAAGGATAG+GGG | - | chr1.3:52419479-52419498 | None:intergenic | 40.0% | |
TGAGAAGATGGATGATTCAC+AGG | + | chr1.3:52418337-52418356 | MS.gene036252:CDS | 40.0% | |
TGTTTCAGGAGATTCACCTA+TGG | - | chr1.3:52419971-52419990 | None:intergenic | 40.0% | |
! | ACTTTTCCCTGAACTCTTCA+TGG | - | chr1.3:52418603-52418622 | None:intergenic | 40.0% |
! | CTTGCATTCTACCGGTTAAA+GGG | + | chr1.3:52419148-52419167 | MS.gene036252:CDS | 40.0% |
! | CTTTTAGTGCCAACTTTTGC+AGG | - | chr1.3:52419937-52419956 | None:intergenic | 40.0% |
! | CTTTTCACCTGAGAAGCTTA+TGG | + | chr1.3:52419048-52419067 | MS.gene036252:CDS | 40.0% |
! | CTTTTCCCTGAACTCTTCAT+GGG | - | chr1.3:52418602-52418621 | None:intergenic | 40.0% |
! | GATGAGTGGTGATGTTATTC+GGG | + | chr1.3:52418283-52418302 | MS.gene036252:CDS | 40.0% |
! | GGTGCTTGAACTTTTCTCAA+GGG | - | chr1.3:52419563-52419582 | None:intergenic | 40.0% |
! | GTTTGTGGCTTTTGAATCTC+CGG | - | chr1.3:52419314-52419333 | None:intergenic | 40.0% |
! | TCTGTGAATGATCTGGTTTG+GGG | + | chr1.3:52418641-52418660 | MS.gene036252:CDS | 40.0% |
! | TGGTGCTTGAACTTTTCTCA+AGG | - | chr1.3:52419564-52419583 | None:intergenic | 40.0% |
! | TTCATCTTTTGCTACCACAC+AGG | + | chr1.3:52420467-52420486 | MS.gene036252:CDS | 40.0% |
! | TTGCTATTGGAGGAACTGTA+GGG | + | chr1.3:52417958-52417977 | MS.gene036252:CDS | 40.0% |
! | TTGGTAGCATATTATGGGGA+TGG | + | chr1.3:52418758-52418777 | MS.gene036252:CDS | 40.0% |
! | TTTTCCCTGAACTCTTCATG+GGG | - | chr1.3:52418601-52418620 | None:intergenic | 40.0% |
!! | AGTTATTGATGGCGAAGAAC+AGG | + | chr1.3:52418226-52418245 | MS.gene036252:CDS | 40.0% |
!! | ATTCAGGTTGAGTCAGATGA+AGG | + | chr1.3:52418458-52418477 | MS.gene036252:CDS | 40.0% |
!! | CTTCAGGTTGTTGAAAACTG+TGG | + | chr1.3:52418968-52418987 | MS.gene036252:CDS | 40.0% |
!! | GAAAAGGTAAAAGCATCAGC+TGG | + | chr1.3:52418401-52418420 | MS.gene036252:CDS | 40.0% |
!! | GAACAGGTAAAAGCATCAGA+TGG | + | chr1.3:52418557-52418576 | MS.gene036252:CDS | 40.0% |
!! | TTCAGGTTGAGTCAGATGAA+GGG | + | chr1.3:52418459-52418478 | MS.gene036252:CDS | 40.0% |
!! | TTTGATGGGTTAGTTGAGGA+GGG | + | chr1.3:52417921-52417940 | MS.gene036252:CDS | 40.0% |
!! | TTTTGATGGGTCAGTTCAAG+AGG | + | chr1.3:52417728-52417747 | MS.gene036252:CDS | 40.0% |
!!! | TGGTTTTGATGGGTTAGTTG+AGG | + | chr1.3:52417917-52417936 | MS.gene036252:CDS | 40.0% |
!!! | TTTTGATGGGTTAGTTGAGG+AGG | + | chr1.3:52417920-52417939 | MS.gene036252:CDS | 40.0% |
AAGCAGAATCTACAGCACTC+CGG | - | chr1.3:52418871-52418890 | None:intergenic | 45.0% | |
AAGCTTCTCAGGTGAAAAGG+AGG | - | chr1.3:52419047-52419066 | None:intergenic | 45.0% | |
AATCGATCAAAGCCTCCAGT+TGG | - | chr1.3:52419100-52419119 | None:intergenic | 45.0% | |
AGAAGGTAAGAGCGAGAATG+AGG | + | chr1.3:52418010-52418029 | MS.gene036252:CDS | 45.0% | |
ATGTCCCCATGAAGAGTTCA+GGG | + | chr1.3:52418594-52418613 | MS.gene036252:CDS | 45.0% | |
ATTGGAGCTTACAACAGCGA+AGG | + | chr1.3:52419117-52419136 | MS.gene036252:CDS | 45.0% | |
CAGGGAAAAGTCGTAGAGAA+GGG | + | chr1.3:52418612-52418631 | MS.gene036252:CDS | 45.0% | |
CGAGAATGAGGTAGTTGAGT+TGG | + | chr1.3:52418022-52418041 | MS.gene036252:CDS | 45.0% | |
CTCCTCAAAATTAGGGGAGA+AGG | - | chr1.3:52419731-52419750 | None:intergenic | 45.0% | |
GAACAGGCAAAAGCTTCAGA+TGG | + | chr1.3:52418242-52418261 | MS.gene036252:CDS | 45.0% | |
GACACATGTTGCATGCAGAA+TGG | + | chr1.3:52420012-52420031 | MS.gene036252:CDS | 45.0% | |
GAGTCAGATGAAGGGAAAGT+TGG | + | chr1.3:52418308-52418327 | MS.gene036252:CDS | 45.0% | |
GAGTTGGATGGAGGGAAAAT+TGG | + | chr1.3:52418149-52418168 | MS.gene036252:CDS | 45.0% | |
GATGTGGGTCTTACTATTGG+AGG | + | chr1.3:52417756-52417775 | MS.gene036252:CDS | 45.0% | |
GATTCGACAAGAGCCAAGTT+TGG | + | chr1.3:52418991-52419010 | MS.gene036252:CDS | 45.0% | |
GATTTCTTTCCCAGGATCAC+TGG | - | chr1.3:52419911-52419930 | None:intergenic | 45.0% | |
GCAATGGCCTCATCATCATT+CGG | - | chr1.3:52419445-52419464 | None:intergenic | 45.0% | |
GCAGGTAAGATTTCTTTCCC+AGG | - | chr1.3:52419919-52419938 | None:intergenic | 45.0% | |
GCTGAGCTGAATCATGATGT+GGG | + | chr1.3:52417705-52417724 | MS.gene036252:CDS | 45.0% | |
GGATGATACTGAGAAGGACT+TGG | + | chr1.3:52417632-52417651 | MS.gene036252:CDS | 45.0% | |
GGATGATTCACAGGAAGAGA+AGG | + | chr1.3:52418346-52418365 | MS.gene036252:CDS | 45.0% | |
GGTAGAATCTGGATTCCCAT+TGG | - | chr1.3:52419410-52419429 | None:intergenic | 45.0% | |
GGTCTAAGCTGAAGTCCTTT+AGG | + | chr1.3:52418801-52418820 | MS.gene036252:CDS | 45.0% | |
GGTTAGGGATGATACTGAGA+AGG | + | chr1.3:52417626-52417645 | MS.gene036252:CDS | 45.0% | |
GTCAAAAGACGGGTCGAATT+TGG | + | chr1.3:52418899-52418918 | MS.gene036252:CDS | 45.0% | |
TATAGAGGTGGAGGGATCTA+TGG | + | chr1.3:52417605-52417624 | MS.gene036252:CDS | 45.0% | |
TCAGGGAAAAGTCGTAGAGA+AGG | + | chr1.3:52418611-52418630 | MS.gene036252:CDS | 45.0% | |
TCTCTGATGGCAGATGGTAA+TGG | + | chr1.3:52419676-52419695 | MS.gene036252:CDS | 45.0% | |
TGAAGGTAAGAGTGAGAAGG+AGG | + | chr1.3:52417818-52417837 | MS.gene036252:CDS | 45.0% | |
TGAGAAGGAGGTAGTTGAGT+TGG | + | chr1.3:52417830-52417849 | MS.gene036252:CDS | 45.0% | |
TGCTGAGCTGAATCATGATG+TGG | + | chr1.3:52417704-52417723 | MS.gene036252:CDS | 45.0% | |
TTCAGGGTTCTCAAGCTGTT+GGG | + | chr1.3:52417790-52417809 | MS.gene036252:CDS | 45.0% | |
TTCTTCTGCCTTTCACCCTT+GGG | - | chr1.3:52419531-52419550 | None:intergenic | 45.0% | |
TTTACTTCAGTGGGTAGCAC+AGG | + | chr1.3:52419810-52419829 | MS.gene036252:CDS | 45.0% | |
TTTCAGGGTTCTCAAGCTGT+TGG | + | chr1.3:52417789-52417808 | MS.gene036252:CDS | 45.0% | |
TTTCTTCTGCCTTTCACCCT+TGG | - | chr1.3:52419532-52419551 | None:intergenic | 45.0% | |
! | AACTGGAGGCTTTGATCGAT+TGG | + | chr1.3:52419099-52419118 | MS.gene036252:CDS | 45.0% |
! | ACTGAGAAGGACTTGGTAGT+TGG | + | chr1.3:52417639-52417658 | MS.gene036252:CDS | 45.0% |
! | CAAGCTGTTGGGTCTTTTGA+AGG | + | chr1.3:52417801-52417820 | MS.gene036252:CDS | 45.0% |
! | CTGAGAAGGACTTGGTAGTT+GGG | + | chr1.3:52417640-52417659 | MS.gene036252:CDS | 45.0% |
! | GAGTGCTGTAGATTCTGCTT+TGG | + | chr1.3:52418871-52418890 | MS.gene036252:CDS | 45.0% |
! | GATGTGACTGTTGCTATTGG+AGG | + | chr1.3:52417948-52417967 | MS.gene036252:CDS | 45.0% |
! | GCTTGCATTCTACCGGTTAA+AGG | + | chr1.3:52419147-52419166 | MS.gene036252:CDS | 45.0% |
! | GCTTGTTAGAACCAGCCAAT+GGG | + | chr1.3:52419392-52419411 | MS.gene036252:CDS | 45.0% |
! | GTTGCTATTGGAGGAACTGT+AGG | + | chr1.3:52417957-52417976 | MS.gene036252:CDS | 45.0% |
! | TAAGTTGGCTAGCAACCCTA+CGG | - | chr1.3:52419618-52419637 | None:intergenic | 45.0% |
! | TCCCTTCTCCCCTAATTTTG+AGG | + | chr1.3:52419726-52419745 | MS.gene036252:CDS | 45.0% |
! | TGAGAAGGACTTGGTAGTTG+GGG | + | chr1.3:52417641-52417660 | MS.gene036252:CDS | 45.0% |
! | TGGTGTTTGTGGTAGTGTTG+AGG | + | chr1.3:52417881-52417900 | MS.gene036252:CDS | 45.0% |
! | TTCTGGAGACACTTCTCTGA+TGG | + | chr1.3:52419663-52419682 | MS.gene036252:CDS | 45.0% |
!! | AAGGAGGTAGTTGAGTTGGA+TGG | + | chr1.3:52417834-52417853 | MS.gene036252:CDS | 45.0% |
!! | AATGAGGTAGTTGAGTTGGG+TGG | + | chr1.3:52418026-52418045 | MS.gene036252:CDS | 45.0% |
!! | AGCTTGTTAGAACCAGCCAA+TGG | + | chr1.3:52419391-52419410 | MS.gene036252:CDS | 45.0% |
!! | ATGAGGTAGTTGAGTTGGGT+GGG | + | chr1.3:52418027-52418046 | MS.gene036252:CDS | 45.0% |
!! | ATTCGGGTTGAGTCAGATGA+AGG | + | chr1.3:52418299-52418318 | MS.gene036252:CDS | 45.0% |
!! | CAATGTTACTCGGGTTGAGT+TGG | + | chr1.3:52418133-52418152 | MS.gene036252:CDS | 45.0% |
!! | TTCGGGTTGAGTCAGATGAA+GGG | + | chr1.3:52418300-52418319 | MS.gene036252:CDS | 45.0% |
!! | TTTTGGTAGCAATCACGCTG+AGG | + | chr1.3:52420149-52420168 | MS.gene036252:CDS | 45.0% |
!!! | ACAGGTTTTTCTGGCTCAGA+AGG | - | chr1.3:52420090-52420109 | None:intergenic | 45.0% |
!!! | AGGTTTTTCTGGCTCAGAAG+GGG | - | chr1.3:52420088-52420107 | None:intergenic | 45.0% |
!!! | CAGGTTTTTCTGGCTCAGAA+GGG | - | chr1.3:52420089-52420108 | None:intergenic | 45.0% |
AATATCTGTCCTGGCCACCA+TGG | - | chr1.3:52418683-52418702 | None:intergenic | 50.0% | |
ACCTCTATAGTAGGAGGAGG+AGG | - | chr1.3:52417594-52417613 | None:intergenic | 50.0% | |
AGGAGGAGGAGGATTGTCTA+GGG | - | chr1.3:52417568-52417587 | None:intergenic | 50.0% | |
AGGGTTGCTAGCCAACTTAC+TGG | + | chr1.3:52419619-52419638 | MS.gene036252:CDS | 50.0% | |
AGGTGGAGGGATCTATGGTT+AGG | + | chr1.3:52417610-52417629 | MS.gene036252:CDS | 50.0% | |
ATACACGTAGGTCCTGTTCC+AGG | + | chr1.3:52420118-52420137 | MS.gene036252:CDS | 50.0% | |
ATCATTGTGGCCAGTGATCC+TGG | + | chr1.3:52419898-52419917 | MS.gene036252:CDS | 50.0% | |
ATGCAATTCCTGGTCCTGTG+TGG | - | chr1.3:52420484-52420503 | None:intergenic | 50.0% | |
CATGTCCCCATGAAGAGTTC+AGG | + | chr1.3:52418593-52418612 | MS.gene036252:CDS | 50.0% | |
CCTCCTACTATAGAGGTGGA+GGG | + | chr1.3:52417597-52417616 | MS.gene036252:CDS | 50.0% | |
CTCAGCTGCTTGCATTCTAC+CGG | + | chr1.3:52419140-52419159 | MS.gene036252:CDS | 50.0% | |
GAACGTACGCGTGGAATGAA+GGG | + | chr1.3:52418780-52418799 | MS.gene036252:CDS | 50.0% | |
GAATCTGGATTCCCATTGGC+TGG | - | chr1.3:52419406-52419425 | None:intergenic | 50.0% | |
GACACTTCTCTGATGGCAGA+TGG | + | chr1.3:52419670-52419689 | MS.gene036252:CDS | 50.0% | |
GAGGTTCCTGAAAAACCTGC+TGG | + | chr1.3:52420168-52420187 | MS.gene036252:CDS | 50.0% | |
GATCCCTCCACCTCTATAGT+AGG | - | chr1.3:52417603-52417622 | None:intergenic | 50.0% | |
GGAGGAGTTGAAGGGTTTCA+GGG | + | chr1.3:52417774-52417793 | MS.gene036252:CDS | 50.0% | |
GGATGAGCAGAAGAAGAAGG+AGG | + | chr1.3:52418073-52418092 | MS.gene036252:CDS | 50.0% | |
GGGTTGCTAGCCAACTTACT+GGG | + | chr1.3:52419620-52419639 | MS.gene036252:CDS | 50.0% | |
GGTGGAGGGATCTATGGTTA+GGG | + | chr1.3:52417611-52417630 | MS.gene036252:CDS | 50.0% | |
TCAGGAGATTCACCTATGGC+TGG | - | chr1.3:52419967-52419986 | None:intergenic | 50.0% | |
TCATTGTGGCCAGTGATCCT+GGG | + | chr1.3:52419899-52419918 | MS.gene036252:CDS | 50.0% | |
TCCACCTCTATAGTAGGAGG+AGG | - | chr1.3:52417597-52417616 | None:intergenic | 50.0% | |
TCCTCCTACTATAGAGGTGG+AGG | + | chr1.3:52417596-52417615 | MS.gene036252:CDS | 50.0% | |
TCCTCCTCCTACTATAGAGG+TGG | + | chr1.3:52417593-52417612 | MS.gene036252:CDS | 50.0% | |
TCCTCCTCCTCCTACTATAG+AGG | + | chr1.3:52417590-52417609 | MS.gene036252:CDS | 50.0% | |
TCTATAGTAGGAGGAGGAGG+AGG | - | chr1.3:52417591-52417610 | None:intergenic | 50.0% | |
TGAGCAGAAGAAGAAGGAGG+AGG | + | chr1.3:52418076-52418095 | MS.gene036252:CDS | 50.0% | |
TGGAGGAGTTGAAGGGTTTC+AGG | + | chr1.3:52417773-52417792 | MS.gene036252:CDS | 50.0% | |
TGGGTAGCACAGGAACCAAA+GGG | + | chr1.3:52419820-52419839 | MS.gene036252:CDS | 50.0% | |
! | CACTCGGTGAGTAGTTAAGC+TGG | - | chr1.3:52420434-52420453 | None:intergenic | 50.0% |
! | TTTTGCTACCACACAGGACC+AGG | + | chr1.3:52420473-52420492 | MS.gene036252:CDS | 50.0% |
!! | GAATGATCTGGTTTGGGGCA+AGG | + | chr1.3:52418646-52418665 | MS.gene036252:CDS | 50.0% |
!! | GGACTTGGTAGTTGGGGTTT+TGG | + | chr1.3:52417647-52417666 | MS.gene036252:CDS | 50.0% |
!! | GTTACTCGGGTTGAGTTGGA+TGG | + | chr1.3:52418137-52418156 | MS.gene036252:CDS | 50.0% |
AAGACGGGTCGAATTTGGGC+TGG | + | chr1.3:52418904-52418923 | MS.gene036252:CDS | 55.0% | |
AGGTGAGAAGCCATCCATGG+TGG | + | chr1.3:52418666-52418685 | MS.gene036252:CDS | 55.0% | |
ATAGTAGGAGGAGGAGGAGG+AGG | - | chr1.3:52417588-52417607 | None:intergenic | 55.0% | |
ATCAGTACGCTGACGTCCCA+AGG | + | chr1.3:52419512-52419531 | MS.gene036252:CDS | 55.0% | |
CCCTCCACCTCTATAGTAGG+AGG | - | chr1.3:52417600-52417619 | None:intergenic | 55.0% | |
GAGGAGGAGGAGGATTGTCT+AGG | - | chr1.3:52417569-52417588 | None:intergenic | 55.0% | |
GCAAGGTGAGAAGCCATCCA+TGG | + | chr1.3:52418663-52418682 | MS.gene036252:CDS | 55.0% | |
GGAACGTACGCGTGGAATGA+AGG | + | chr1.3:52418779-52418798 | MS.gene036252:CDS | 55.0% | |
GTGGGTAGCACAGGAACCAA+AGG | + | chr1.3:52419819-52419838 | MS.gene036252:CDS | 55.0% | |
GTTTACGCTTGCGACGGGAT+TGG | - | chr1.3:52419336-52419355 | None:intergenic | 55.0% | |
TAGAGGGCGACCCAGTAAGT+TGG | - | chr1.3:52419633-52419652 | None:intergenic | 55.0% | |
TCAGTACGCTGACGTCCCAA+GGG | + | chr1.3:52419513-52419532 | MS.gene036252:CDS | 55.0% | |
!! | ACTCGGGTTGAGTTGGATGG+AGG | + | chr1.3:52418140-52418159 | MS.gene036252:CDS | 55.0% |
!! | CTCGGGTTGAGTTGGATGGA+GGG | + | chr1.3:52418141-52418160 | MS.gene036252:CDS | 55.0% |
!! | CTTGCGACGGGATTGGTTTG+TGG | - | chr1.3:52419329-52419348 | None:intergenic | 55.0% |
AGAAGCCATCCATGGTGGCC+AGG | + | chr1.3:52418671-52418690 | MS.gene036252:CDS | 60.0% | |
AGGAAGCAAGCGGGCAAGAG+TGG | + | chr1.3:52420326-52420345 | MS.gene036252:CDS | 60.0% | |
ATGGGGATGGAACGTACGCG+TGG | + | chr1.3:52418771-52418790 | MS.gene036252:CDS | 60.0% | |
GCCGAAAGCAGCTTGCGCAT+CGG | - | chr1.3:52420367-52420386 | None:intergenic | 60.0% | |
GCTGACGTCCCAAGGGTGAA+AGG | + | chr1.3:52419520-52419539 | MS.gene036252:CDS | 60.0% | |
TCCTTCGGATGCATCTGCGC+AGG | + | chr1.3:52418706-52418725 | MS.gene036252:CDS | 60.0% | |
TCTGTCCTGGCCACCATGGA+TGG | - | chr1.3:52418679-52418698 | None:intergenic | 60.0% | |
! | GCCGATGCGCAAGCTGCTTT+CGG | + | chr1.3:52420363-52420382 | MS.gene036252:CDS | 60.0% |
GCCTGCGCAGATGCATCCGA+AGG | - | chr1.3:52418710-52418729 | None:intergenic | 65.0% | |
GTAGGAGGAGGAGGAGGAGG+AGG | - | chr1.3:52417585-52417604 | None:intergenic | 65.0% | |
! | GAAGGGGCGCGCTCATAGTC+TGG | - | chr1.3:52420072-52420091 | None:intergenic | 65.0% |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr1.3:52417576-52417595 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 52417546 | 52420539 | 52417546 | ID=MS.gene036252 |
chr1.3 | mRNA | 52417546 | 52420539 | 52417546 | ID=MS.gene036252.t1;Parent=MS.gene036252 |
chr1.3 | exon | 52417546 | 52420539 | 52417546 | ID=MS.gene036252.t1.exon1;Parent=MS.gene036252.t1 |
chr1.3 | CDS | 52417546 | 52420539 | 52417546 | ID=cds.MS.gene036252.t1;Parent=MS.gene036252.t1 |
Gene Sequence |
Protein sequence |