Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036365.t1 | XP_013463825.1 | 96.6 | 593 | 19 | 1 | 1 | 592 | 1 | 593 | 0.00E+00 | 1142.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036365.t1 | F4IPM3 | 61.5 | 600 | 214 | 7 | 9 | 592 | 1 | 599 | 1.2e-199 | 697.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036365.t1 | A0A072VIC7 | 96.6 | 593 | 19 | 1 | 1 | 592 | 1 | 593 | 0.0e+00 | 1142.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90557 | MS.gene036365 | PPI |
| MS.gene036365 | MS.gene67632 | PPI |
| MS.gene036365 | MS.gene90557 | PPI |
| MS.gene036365 | MS.gene68707 | PPI |
| MS.gene67632 | MS.gene036365 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036365.t1 | MTR_2g450080 | 96.627 | 593 | 19 | 1 | 1 | 592 | 1 | 593 | 0.0 | 1196 |
| MS.gene036365.t1 | MTR_4g090970 | 53.760 | 625 | 240 | 11 | 8 | 592 | 12 | 627 | 0.0 | 624 |
| MS.gene036365.t1 | MTR_2g011810 | 52.848 | 632 | 253 | 9 | 1 | 592 | 6 | 632 | 0.0 | 613 |
| MS.gene036365.t1 | MTR_4g128600 | 53.115 | 610 | 236 | 8 | 30 | 592 | 29 | 635 | 0.0 | 603 |
| MS.gene036365.t1 | MTR_8g104510 | 42.373 | 413 | 226 | 7 | 11 | 417 | 4 | 410 | 5.88e-104 | 322 |
| MS.gene036365.t1 | MTR_8g104490 | 39.686 | 446 | 248 | 7 | 14 | 453 | 10 | 440 | 1.25e-103 | 322 |
| MS.gene036365.t1 | MTR_4g106810 | 46.556 | 363 | 189 | 4 | 21 | 382 | 10 | 368 | 9.64e-103 | 322 |
| MS.gene036365.t1 | MTR_6g083730 | 41.388 | 418 | 226 | 7 | 32 | 435 | 30 | 442 | 1.49e-100 | 314 |
| MS.gene036365.t1 | MTR_8g104490 | 40.934 | 364 | 196 | 5 | 95 | 454 | 28 | 376 | 1.12e-90 | 286 |
| MS.gene036365.t1 | MTR_6g083320 | 47.037 | 270 | 139 | 3 | 32 | 298 | 30 | 298 | 9.68e-79 | 255 |
| MS.gene036365.t1 | MTR_7g112000 | 34.015 | 391 | 226 | 11 | 19 | 396 | 8 | 379 | 1.02e-57 | 202 |
| MS.gene036365.t1 | MTR_7g111980 | 28.843 | 579 | 325 | 23 | 46 | 592 | 51 | 574 | 1.13e-45 | 170 |
| MS.gene036365.t1 | MTR_7g111980 | 29.026 | 534 | 299 | 22 | 91 | 592 | 6 | 491 | 3.56e-43 | 161 |
| MS.gene036365.t1 | MTR_7g111960 | 32.448 | 339 | 212 | 8 | 54 | 384 | 60 | 389 | 3.81e-43 | 163 |
| MS.gene036365.t1 | MTR_6g083810 | 34.426 | 122 | 77 | 2 | 15 | 134 | 13 | 133 | 2.52e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036365.t1 | AT2G24300 | 61.513 | 608 | 213 | 8 | 1 | 592 | 1 | 603 | 0.0 | 727 |
| MS.gene036365.t1 | AT2G24300 | 61.564 | 601 | 212 | 8 | 9 | 592 | 1 | 599 | 0.0 | 723 |
| MS.gene036365.t1 | AT4G31000 | 60.034 | 593 | 205 | 7 | 1 | 592 | 1 | 562 | 0.0 | 690 |
| MS.gene036365.t1 | AT2G24300 | 61.426 | 547 | 193 | 7 | 62 | 592 | 8 | 552 | 0.0 | 660 |
| MS.gene036365.t1 | AT2G18750 | 54.309 | 615 | 247 | 11 | 6 | 592 | 10 | 618 | 0.0 | 608 |
| MS.gene036365.t1 | AT2G18750 | 54.309 | 615 | 247 | 11 | 6 | 592 | 10 | 618 | 0.0 | 608 |
| MS.gene036365.t1 | AT2G18750 | 54.309 | 615 | 247 | 11 | 6 | 592 | 10 | 618 | 0.0 | 608 |
| MS.gene036365.t1 | AT5G57580 | 51.002 | 649 | 245 | 15 | 1 | 589 | 2 | 637 | 0.0 | 599 |
| MS.gene036365.t1 | AT4G25800 | 53.934 | 610 | 237 | 12 | 11 | 592 | 2 | 595 | 0.0 | 599 |
| MS.gene036365.t1 | AT4G25800 | 53.934 | 610 | 237 | 12 | 11 | 592 | 2 | 595 | 0.0 | 599 |
| MS.gene036365.t1 | AT4G31000 | 53.601 | 597 | 216 | 8 | 1 | 592 | 1 | 541 | 0.0 | 597 |
| MS.gene036365.t1 | AT5G62570 | 45.125 | 359 | 188 | 6 | 36 | 391 | 13 | 365 | 4.08e-99 | 310 |
| MS.gene036365.t1 | AT5G62570 | 44.875 | 361 | 190 | 6 | 34 | 391 | 26 | 380 | 4.87e-99 | 311 |
| MS.gene036365.t1 | AT5G62570 | 45.190 | 343 | 179 | 6 | 34 | 373 | 26 | 362 | 5.75e-95 | 296 |
| MS.gene036365.t1 | AT1G73805 | 39.348 | 460 | 244 | 12 | 16 | 469 | 11 | 441 | 8.74e-88 | 280 |
| MS.gene036365.t1 | AT5G62570 | 47.584 | 269 | 133 | 5 | 34 | 300 | 26 | 288 | 4.86e-75 | 241 |
| MS.gene036365.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 37 | 384 | 28 | 363 | 2.61e-74 | 243 |
| MS.gene036365.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 37 | 384 | 28 | 363 | 3.51e-73 | 244 |
| MS.gene036365.t1 | AT5G26920 | 38.920 | 352 | 187 | 10 | 37 | 384 | 28 | 355 | 4.79e-71 | 239 |
Find 140 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCCTGGTGCTTCTATTCT+TGG | 0.164360 | 2.4:+39476012 | None:intergenic |
| TTTCTCAACTTTATTGTTCT+TGG | 0.176255 | 2.4:+39477330 | None:intergenic |
| CCTCGCGTTCCTTTACTTCA+TGG | 0.205973 | 2.4:+39475761 | None:intergenic |
| AAAATTAGCTCCTTCATTAA+TGG | 0.231011 | 2.4:+39474349 | None:intergenic |
| GTGGCATTCTTGTTCTAAAA+TGG | 0.234537 | 2.4:+39475974 | None:intergenic |
| TTAAGCTTAAAGCAGCTTTA+AGG | 0.234780 | 2.4:-39474214 | MS.gene036365:CDS |
| CTAGCTAAACCAGGTAGTTT+TGG | 0.249092 | 2.4:+39477256 | None:intergenic |
| ATTAATGAAGGAGCTAATTT+TGG | 0.250528 | 2.4:-39474347 | MS.gene036365:CDS |
| GGAGCGTGCTTTGGCGAAAT+TGG | 0.266457 | 2.4:-39476656 | MS.gene036365:CDS |
| TTCAACTTAGCAACTGATTC+TGG | 0.274631 | 2.4:+39475853 | None:intergenic |
| CAGCTTTGCATGATGAAGTT+TGG | 0.275685 | 2.4:-39475363 | MS.gene036365:CDS |
| TGTAGATTCCTTGGTGAAAA+AGG | 0.308211 | 2.4:-39474801 | MS.gene036365:CDS |
| GCAAAGACTCTGCTCATCTT+TGG | 0.340248 | 2.4:-39476923 | MS.gene036365:CDS |
| TGAACAACATTTCCCGTGTT+TGG | 0.350935 | 2.4:+39475883 | None:intergenic |
| ACCTGGCATGTTGTAATTCA+TGG | 0.364741 | 2.4:+39474523 | None:intergenic |
| TAATAATTACCTCCAACTTC+AGG | 0.370491 | 2.4:+39474491 | None:intergenic |
| ATGAGGAAGTTGATGATGAT+TGG | 0.376041 | 2.4:-39475804 | MS.gene036365:CDS |
| GGGAAAAGGCCACTTCTAAC+TGG | 0.383127 | 2.4:-39475739 | MS.gene036365:CDS |
| AAGGAAGGAGTAGGAACATT+AGG | 0.398865 | 2.4:-39475697 | MS.gene036365:CDS |
| TGCTCGGGGAAGGCTGTTGT+TGG | 0.405286 | 2.4:-39474242 | MS.gene036365:CDS |
| GCATGATGAAGTTTGGAGAT+TGG | 0.410980 | 2.4:-39475356 | MS.gene036365:CDS |
| TTCTTTGACTAATTCCAAAA+GGG | 0.417389 | 2.4:-39474729 | MS.gene036365:CDS |
| TAAAGGAACGCGAGGGGAAA+AGG | 0.424802 | 2.4:-39475753 | MS.gene036365:CDS |
| GTTGGAGGTAATTATTATCA+TGG | 0.428342 | 2.4:-39474485 | MS.gene036365:CDS |
| TGAAGAAGTGGAGCGTGCTT+TGG | 0.435844 | 2.4:-39476665 | MS.gene036365:CDS |
| GCTTAGAAGTTCACAAATGT+TGG | 0.440272 | 2.4:-39474402 | MS.gene036365:CDS |
| GAAATTGGACCATGCTAAAC+TGG | 0.440443 | 2.4:-39476641 | MS.gene036365:CDS |
| ATTCTTTGACTAATTCCAAA+AGG | 0.441002 | 2.4:-39474730 | MS.gene036365:CDS |
| CTCCGTCATATTCTATGACT+TGG | 0.448855 | 2.4:+39474762 | None:intergenic |
| GAGGATAATGTCAAGTGCTC+GGG | 0.453236 | 2.4:-39474257 | MS.gene036365:CDS |
| ATCACTCACTTCAAATCAAA+AGG | 0.454320 | 2.4:-39474933 | MS.gene036365:intron |
| AAAGTTTAGACTTGGTGTTA+AGG | 0.456288 | 2.4:-39475632 | MS.gene036365:CDS |
| CCTGGTGCTTCTATTCTTGG+CGG | 0.458356 | 2.4:+39476015 | None:intergenic |
| ACAGATGTCTGTAGATTCCT+TGG | 0.459013 | 2.4:-39474810 | MS.gene036365:intron |
| TACCATCTGATAATCCGAAC+TGG | 0.468563 | 2.4:+39474574 | None:intergenic |
| CTTGGTGTTAAGGTGGCTCC+TGG | 0.469576 | 2.4:-39475622 | MS.gene036365:CDS |
| GTGATTCTAAAGAAAAGAAC+TGG | 0.470764 | 2.4:+39474951 | None:intergenic |
| TCAATACAGGTACTTGGTAG+TGG | 0.472613 | 2.4:-39475124 | MS.gene036365:intron |
| AGTTGAGAAAAGAAGTTATG+AGG | 0.476851 | 2.4:-39477317 | MS.gene036365:CDS |
| GCTCGGGGAAGGCTGTTGTT+GGG | 0.477038 | 2.4:-39474241 | MS.gene036365:CDS |
| ATTATCATGGAGACTGGTCT+AGG | 0.480685 | 2.4:-39474472 | MS.gene036365:CDS |
| CAAACTTCATCATGCAAAGC+TGG | 0.482947 | 2.4:+39475364 | None:intergenic |
| TTCACAGGAGGGAAGGTTGA+GGG | 0.486109 | 2.4:-39475943 | MS.gene036365:CDS |
| CTTTCACTGATAATTCTAGC+TGG | 0.486782 | 2.4:-39475666 | MS.gene036365:CDS |
| AGTCATCCATGTTGTCTTGT+TGG | 0.491337 | 2.4:-39475908 | MS.gene036365:CDS |
| CTTTGAAAGCCATGAAGTAA+AGG | 0.491778 | 2.4:-39475770 | MS.gene036365:CDS |
| GGTGATAATAATCCTGAAGT+TGG | 0.497341 | 2.4:-39474503 | MS.gene036365:CDS |
| GGGAAGGTTGAGGGAGAGCA+AGG | 0.502361 | 2.4:-39475934 | MS.gene036365:CDS |
| GCTTCTTTGACTGAGTAAGA+TGG | 0.506593 | 2.4:+39477278 | None:intergenic |
| AGCTTAAAGCAGCTTTAAGG+TGG | 0.507495 | 2.4:-39474211 | MS.gene036365:CDS |
| ACGGGAAATGTTGTTCAAGT+TGG | 0.508647 | 2.4:-39475877 | MS.gene036365:CDS |
| CAAAACTACCTGGTTTAGCT+AGG | 0.519085 | 2.4:-39477255 | MS.gene036365:intron |
| TGTCTTGTTGGAACCAAACA+CGG | 0.519244 | 2.4:-39475896 | MS.gene036365:CDS |
| CGAATCCCGTCACAATATCC+AGG | 0.519800 | 2.4:+39475604 | None:intergenic |
| TGTAATTGTGGAAGCATTGA+AGG | 0.522949 | 2.4:-39476956 | MS.gene036365:CDS |
| CGGGGAAGGCTGTTGTTGGG+TGG | 0.523645 | 2.4:-39474238 | MS.gene036365:CDS |
| AGCATGCATCTGCAAAGGGA+AGG | 0.524936 | 2.4:-39474655 | MS.gene036365:CDS |
| TTACTTAAGACCATTAATGA+AGG | 0.525303 | 2.4:-39474359 | MS.gene036365:CDS |
| CATGCCAAGACATGTGTGTT+GGG | 0.529035 | 2.4:-39475067 | MS.gene036365:CDS |
| GTAATTATTATCATGGAGAC+TGG | 0.529490 | 2.4:-39474478 | MS.gene036365:CDS |
| GCAGAGAAACGGACAAGGGT+TGG | 0.529494 | 2.4:-39474450 | MS.gene036365:CDS |
| CTTACACTTCTTAATTTCTG+AGG | 0.530066 | 2.4:+39475241 | None:intergenic |
| ATTCACAGGAGGGAAGGTTG+AGG | 0.534510 | 2.4:-39475944 | MS.gene036365:CDS |
| TGAGGATAATGTCAAGTGCT+CGG | 0.535333 | 2.4:-39474258 | MS.gene036365:CDS |
| GCATGCATCTGCAAAGGGAA+GGG | 0.537382 | 2.4:-39474654 | MS.gene036365:CDS |
| CCGCCAAGAATAGAAGCACC+AGG | 0.541056 | 2.4:-39476015 | MS.gene036365:CDS |
| TCTATGATCTTTAACAGCAA+AGG | 0.544423 | 2.4:+39475558 | None:intergenic |
| GACTGGTCTAGGCAGAGAAA+CGG | 0.545642 | 2.4:-39474461 | MS.gene036365:CDS |
| TAAGTTGAATGTTGTTGTGC+TGG | 0.549961 | 2.4:-39475839 | MS.gene036365:CDS |
| TAATGTCAAGTGCTCGGGGA+AGG | 0.551235 | 2.4:-39474252 | MS.gene036365:CDS |
| GCTTAAAGCAGCTTTAAGGT+GGG | 0.551907 | 2.4:-39474210 | MS.gene036365:CDS |
| AGTTCGGATTATCAGATGGT+AGG | 0.552487 | 2.4:-39474572 | MS.gene036365:CDS |
| GATAATAATCCTGAAGTTGG+AGG | 0.553373 | 2.4:-39474500 | MS.gene036365:CDS |
| TGGCTCCTGGATATTGTGAC+GGG | 0.555314 | 2.4:-39475609 | MS.gene036365:CDS |
| GTCTTGTTGGAACCAAACAC+GGG | 0.556828 | 2.4:-39475895 | MS.gene036365:CDS |
| GTTAGTCTCAAGGAAGGAGT+AGG | 0.558492 | 2.4:-39475706 | MS.gene036365:CDS |
| CTAAGAGGTCTCATTGCTGA+TGG | 0.560083 | 2.4:-39474974 | MS.gene036365:CDS |
| GTTCGGATTATCAGATGGTA+GGG | 0.561192 | 2.4:-39474571 | MS.gene036365:CDS |
| AGTACCCAACACACATGTCT+TGG | 0.562839 | 2.4:+39475063 | None:intergenic |
| AGAAGCAGAAAGTTTAGACT+TGG | 0.563077 | 2.4:-39475640 | MS.gene036365:CDS |
| ATGAAGTTTGGAGATTGGAT+CGG | 0.564012 | 2.4:-39475351 | MS.gene036365:CDS |
| ACATCACAAATAGCATTACC+AGG | 0.566533 | 2.4:-39474548 | MS.gene036365:CDS |
| GAATAACTACTCATCCAGTT+CGG | 0.566553 | 2.4:-39474588 | MS.gene036365:CDS |
| GTTTAGACTTGGTGTTAAGG+TGG | 0.566982 | 2.4:-39475629 | MS.gene036365:CDS |
| GACGGGATTCGAGTGCGTGA+AGG | 0.569944 | 2.4:-39475592 | MS.gene036365:CDS |
| CTTAAAGCAGCTTTAAGGTG+GGG | 0.570067 | 2.4:-39474209 | MS.gene036365:CDS |
| GAGCAGCATGCATCTGCAAA+GGG | 0.570777 | 2.4:-39474659 | MS.gene036365:CDS |
| ACGTTGTCGCAGAAGAACTT+CGG | 0.578446 | 2.4:-39474424 | MS.gene036365:CDS |
| TCACTTATTCACAGGAGGGA+AGG | 0.579079 | 2.4:-39475950 | MS.gene036365:CDS |
| TTGCAAGTTAGTCTCAAGGA+AGG | 0.579661 | 2.4:-39475712 | MS.gene036365:CDS |
| TGCAAATCTCCAGTTAGAAG+TGG | 0.579936 | 2.4:+39475730 | None:intergenic |
| GTGGAATGTCAAACAGAATG+TGG | 0.581489 | 2.4:-39475105 | MS.gene036365:CDS |
| AGAAGTTCACAAATGTTGGA+AGG | 0.581513 | 2.4:-39474398 | MS.gene036365:CDS |
| TCAAAGAAGCCAAAACTACC+TGG | 0.581861 | 2.4:-39477265 | MS.gene036365:CDS |
| ATGCCACCTCACTTATTCAC+AGG | 0.582197 | 2.4:-39475958 | MS.gene036365:CDS |
| AGAGCAGCATGCATCTGCAA+AGG | 0.582399 | 2.4:-39474660 | MS.gene036365:CDS |
| TTTGCTGTTAAAGATCATAG+AGG | 0.584829 | 2.4:-39475556 | MS.gene036365:CDS |
| GCAAATGTACAGTGTAATTG+TGG | 0.585229 | 2.4:-39476968 | MS.gene036365:intron |
| ACCATGAATTACAACATGCC+AGG | 0.586086 | 2.4:-39474524 | MS.gene036365:CDS |
| TCTTTGACTAATTCCAAAAG+GGG | 0.586778 | 2.4:-39474728 | MS.gene036365:CDS |
| ACCATGCTAAACTGGTTGAC+AGG | 0.587347 | 2.4:-39476633 | MS.gene036365:intron |
| CTTACAGGTAAGTGAAGAAG+TGG | 0.588186 | 2.4:-39476677 | MS.gene036365:intron |
| ACTTCAGGATTATTATCACC+TGG | 0.590073 | 2.4:+39474506 | None:intergenic |
| GTGGCTCCTGGATATTGTGA+CGG | 0.594325 | 2.4:-39475610 | MS.gene036365:CDS |
| ACTGATGAAACTCATAGCAC+TGG | 0.598016 | 2.4:-39475022 | MS.gene036365:CDS |
| AGATTTGCAAGTTAGTCTCA+AGG | 0.602535 | 2.4:-39475716 | MS.gene036365:CDS |
| ATGTTGTAATTCATGGTCCC+TGG | 0.604841 | 2.4:+39474530 | None:intergenic |
| GCATGCCAAGACATGTGTGT+TGG | 0.606902 | 2.4:-39475068 | MS.gene036365:CDS |
| TTGAATGTTGTTGTGCTGGA+AGG | 0.607235 | 2.4:-39475835 | MS.gene036365:CDS |
| AAGACGCAGGAAATCTTCTA+CGG | 0.608096 | 2.4:+39475276 | None:intergenic |
| TTGAAATACCTAGCTAAACC+AGG | 0.612518 | 2.4:+39477247 | None:intergenic |
| ATCCAGTTCGGATTATCAGA+TGG | 0.612546 | 2.4:-39474576 | MS.gene036365:CDS |
| GAGATTGGATCGGATAGCAA+AGG | 0.612915 | 2.4:-39475341 | MS.gene036365:CDS |
| CCATGAAGTAAAGGAACGCG+AGG | 0.615876 | 2.4:-39475761 | MS.gene036365:CDS |
| TCTAGGCAGAGAAACGGACA+AGG | 0.618669 | 2.4:-39474455 | MS.gene036365:CDS |
| ACTTCATCATGCAAAGCTGG+TGG | 0.620129 | 2.4:+39475367 | None:intergenic |
| TGGAATGTCAAACAGAATGT+GGG | 0.623286 | 2.4:-39475104 | MS.gene036365:CDS |
| AGGATAATGTCAAGTGCTCG+GGG | 0.626767 | 2.4:-39474256 | MS.gene036365:CDS |
| TTCCCTCCTGTGAATAAGTG+AGG | 0.629123 | 2.4:+39475952 | None:intergenic |
| ACCTGTCAACCAGTTTAGCA+TGG | 0.634546 | 2.4:+39476632 | None:intergenic |
| CCACCTCACTTATTCACAGG+AGG | 0.635060 | 2.4:-39475955 | MS.gene036365:CDS |
| AACAACATATATGAGCTAAG+AGG | 0.636409 | 2.4:-39474989 | MS.gene036365:CDS |
| TTCTTAATTTCTGAGGCTCG+CGG | 0.636986 | 2.4:+39475248 | None:intergenic |
| CGCCAAGAATAGAAGCACCA+GGG | 0.641290 | 2.4:-39476014 | MS.gene036365:CDS |
| GCCAAGAATAGAAGCACCAG+GGG | 0.641379 | 2.4:-39476013 | MS.gene036365:CDS |
| CACCTCACTTATTCACAGGA+GGG | 0.647323 | 2.4:-39475954 | MS.gene036365:CDS |
| CATGAAGTAAAGGAACGCGA+GGG | 0.652960 | 2.4:-39475760 | MS.gene036365:CDS |
| AATTGTGGAAGCATTGAAGG+TGG | 0.654590 | 2.4:-39476953 | MS.gene036365:CDS |
| TTGGATCGGATAGCAAAGGA+TGG | 0.661274 | 2.4:-39475337 | MS.gene036365:CDS |
| TTGGTTCCAACAAGACAACA+TGG | 0.661910 | 2.4:+39475902 | None:intergenic |
| CCTCCTGTGAATAAGTGAGG+TGG | 0.664327 | 2.4:+39475955 | None:intergenic |
| GACCAAGTCATAGAATATGA+CGG | 0.675342 | 2.4:-39474764 | MS.gene036365:CDS |
| CTGAACGAATGATACATCTG+AGG | 0.683665 | 2.4:+39474281 | None:intergenic |
| GCTCGCGGACAAGAAGACGC+AGG | 0.691441 | 2.4:+39475263 | None:intergenic |
| ATGAAGTAAAGGAACGCGAG+GGG | 0.703697 | 2.4:-39475759 | MS.gene036365:CDS |
| GATGTATCATTCGTTCAGTG+AGG | 0.706180 | 2.4:-39474276 | MS.gene036365:CDS |
| CATCACAAATAGCATTACCA+GGG | 0.720514 | 2.4:-39474547 | MS.gene036365:CDS |
| CAGAATGTGGGAGAACACTG+TGG | 0.727384 | 2.4:-39475092 | MS.gene036365:CDS |
| CTAGGCAGAGAAACGGACAA+GGG | 0.731036 | 2.4:-39474454 | MS.gene036365:CDS |
| TGGAAGGTGATGATATGCAA+AGG | 0.731790 | 2.4:-39474382 | MS.gene036365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTCTAAATTAAAATACTAT+AGG | + | chr2.4:39474300-39474319 | None:intergenic | 15.0% |
| !! | TTTAATAGAATCTCATATAA+TGG | - | chr2.4:39474395-39474414 | MS.gene036365:CDS | 15.0% |
| !!! | AATTACTATTTATTTTCGAT+AGG | + | chr2.4:39475068-39475087 | None:intergenic | 15.0% |
| !!! | CAACAATTTTTTTAATATGA+AGG | - | chr2.4:39476043-39476062 | MS.gene036365:intron | 15.0% |
| !! | ATAGCTGATAATAGATTTAA+TGG | - | chr2.4:39474954-39474973 | MS.gene036365:CDS | 20.0% |
| !! | TTAACGTTATGATGTAAATT+AGG | - | chr2.4:39475011-39475030 | MS.gene036365:CDS | 20.0% |
| !!! | AAAACTTGTTTGTTTTTCAT+AGG | + | chr2.4:39475194-39475213 | None:intergenic | 20.0% |
| !!! | AAACTTGTTTGTTTTTCATA+GGG | + | chr2.4:39475193-39475212 | None:intergenic | 20.0% |
| ! | AAAATTAGCTCCTTCATTAA+TGG | + | chr2.4:39477145-39477164 | None:intergenic | 25.0% |
| ! | AATAGTAATTGATATCTGCT+AGG | - | chr2.4:39475078-39475097 | MS.gene036365:CDS | 25.0% |
| ! | ATATAGTAGAGTAAGAACAA+AGG | - | chr2.4:39476020-39476039 | MS.gene036365:CDS | 25.0% |
| ! | ATTCTTTGACTAATTCCAAA+AGG | - | chr2.4:39476761-39476780 | MS.gene036365:intron | 25.0% |
| ! | TGCTTGAATATTTCACAAAA+AGG | - | chr2.4:39474694-39474713 | MS.gene036365:CDS | 25.0% |
| ! | TGTAAGAATACACTTCTAAA+TGG | - | chr2.4:39476267-39476286 | MS.gene036365:intron | 25.0% |
| ! | TTAATATGAAGGCTATATTG+AGG | - | chr2.4:39476054-39476073 | MS.gene036365:intron | 25.0% |
| ! | TTACTTAAGACCATTAATGA+AGG | - | chr2.4:39477132-39477151 | MS.gene036365:intron | 25.0% |
| ! | TTCTTTCTACTAATGTAATG+TGG | - | chr2.4:39474329-39474348 | MS.gene036365:CDS | 25.0% |
| ! | TTCTTTGACTAATTCCAAAA+GGG | - | chr2.4:39476762-39476781 | MS.gene036365:intron | 25.0% |
| ! | TTGTGAAATATTCAAGCAAA+GGG | + | chr2.4:39474692-39474711 | None:intergenic | 25.0% |
| ! | TTTCTCAACTTTATTGTTCT+TGG | + | chr2.4:39474164-39474183 | None:intergenic | 25.0% |
| ! | TTTGTGAAATATTCAAGCAA+AGG | + | chr2.4:39474693-39474712 | None:intergenic | 25.0% |
| !! | ATTAATGAAGGAGCTAATTT+TGG | - | chr2.4:39477144-39477163 | MS.gene036365:intron | 25.0% |
| !! | GAAAAAGGCATATGATAATT+GGG | - | chr2.4:39476705-39476724 | MS.gene036365:intron | 25.0% |
| !! | TGAAAAAGGCATATGATAAT+TGG | - | chr2.4:39476704-39476723 | MS.gene036365:intron | 25.0% |
| !!! | TTGCAAATGTTGATTTTGTT+CGG | + | chr2.4:39476878-39476897 | None:intergenic | 25.0% |
| !!! | TTTTTTTGAGCGTTTAATCA+CGG | - | chr2.4:39474649-39474668 | MS.gene036365:CDS | 25.0% |
| AACAACATATATGAGCTAAG+AGG | - | chr2.4:39476502-39476521 | MS.gene036365:intron | 30.0% | |
| AGTTGAGAAAAGAAGTTATG+AGG | - | chr2.4:39474174-39474193 | MS.gene036365:CDS | 30.0% | |
| ATACTCACGTATATAAGTTG+CGG | + | chr2.4:39475393-39475412 | None:intergenic | 30.0% | |
| ATCACTCACTTCAAATCAAA+AGG | - | chr2.4:39476558-39476577 | MS.gene036365:intron | 30.0% | |
| ATGATTAGAGAAGAGTGATA+TGG | + | chr2.4:39476304-39476323 | None:intergenic | 30.0% | |
| CAACTAAAATGTATCAGAGA+CGG | + | chr2.4:39475443-39475462 | None:intergenic | 30.0% | |
| CGTTATGATGTAAATTAGGA+TGG | - | chr2.4:39475015-39475034 | MS.gene036365:CDS | 30.0% | |
| CTTACACTTCTTAATTTCTG+AGG | + | chr2.4:39476253-39476272 | None:intergenic | 30.0% | |
| GGAATCTTGTATATAAGTCA+AGG | - | chr2.4:39474416-39474435 | MS.gene036365:CDS | 30.0% | |
| GGTTATCAAATCAAAGAACA+TGG | - | chr2.4:39474715-39474734 | MS.gene036365:CDS | 30.0% | |
| GTAATTATTATCATGGAGAC+TGG | - | chr2.4:39477013-39477032 | MS.gene036365:intron | 30.0% | |
| GTTGGAGGTAATTATTATCA+TGG | - | chr2.4:39477006-39477025 | MS.gene036365:intron | 30.0% | |
| TAATAATTACCTCCAACTTC+AGG | + | chr2.4:39477003-39477022 | None:intergenic | 30.0% | |
| TATATAAGTCAAGGTAGCAT+TGG | - | chr2.4:39474425-39474444 | MS.gene036365:CDS | 30.0% | |
| TCAGAATTCTAATCTGACTA+GGG | + | chr2.4:39474890-39474909 | None:intergenic | 30.0% | |
| TCTATGATCTTTAACAGCAA+AGG | + | chr2.4:39475936-39475955 | None:intergenic | 30.0% | |
| TCTTTGACTAATTCCAAAAG+GGG | - | chr2.4:39476763-39476782 | MS.gene036365:intron | 30.0% | |
| TTAAGCTTAAAGCAGCTTTA+AGG | - | chr2.4:39477277-39477296 | MS.gene036365:CDS | 30.0% | |
| TTCAGAATTCTAATCTGACT+AGG | + | chr2.4:39474891-39474910 | None:intergenic | 30.0% | |
| ! | GTGATTCTAAAGAAAAGAAC+TGG | + | chr2.4:39476543-39476562 | None:intergenic | 30.0% |
| !! | AAAGTTTAGACTTGGTGTTA+AGG | - | chr2.4:39475859-39475878 | MS.gene036365:CDS | 30.0% |
| !! | TTTGCTGTTAAAGATCATAG+AGG | - | chr2.4:39475935-39475954 | MS.gene036365:CDS | 30.0% |
| !!! | CTGGAATTTGTGGTTTTTTT+AGG | + | chr2.4:39475164-39475183 | None:intergenic | 30.0% |
| AAAAATAAACCGAGACACGT+TGG | - | chr2.4:39475224-39475243 | MS.gene036365:intron | 35.0% | |
| AAGTACCTGTATTGAAAAGG+TGG | + | chr2.4:39476362-39476381 | None:intergenic | 35.0% | |
| ACATCACAAATAGCATTACC+AGG | - | chr2.4:39476943-39476962 | MS.gene036365:CDS | 35.0% | |
| ACCAAGTACCTGTATTGAAA+AGG | + | chr2.4:39476365-39476384 | None:intergenic | 35.0% | |
| ACTTCAGGATTATTATCACC+TGG | + | chr2.4:39476988-39477007 | None:intergenic | 35.0% | |
| AGAAGCAGAAAGTTTAGACT+TGG | - | chr2.4:39475851-39475870 | MS.gene036365:CDS | 35.0% | |
| AGAAGTTCACAAATGTTGGA+AGG | - | chr2.4:39477093-39477112 | MS.gene036365:intron | 35.0% | |
| AGTTAATCGTTCTAATTCCG+TGG | - | chr2.4:39474791-39474810 | MS.gene036365:CDS | 35.0% | |
| AGTTTAATAGTGAACACTGC+TGG | - | chr2.4:39475966-39475985 | MS.gene036365:CDS | 35.0% | |
| ATAATGCGTACATTCATCCA+CGG | + | chr2.4:39475115-39475134 | None:intergenic | 35.0% | |
| ATGAAGTTTGGAGATTGGAT+CGG | - | chr2.4:39476140-39476159 | MS.gene036365:intron | 35.0% | |
| CATCACAAATAGCATTACCA+GGG | - | chr2.4:39476944-39476963 | MS.gene036365:CDS | 35.0% | |
| CTTTCACTGATAATTCTAGC+TGG | - | chr2.4:39475825-39475844 | MS.gene036365:CDS | 35.0% | |
| GAATAACTACTCATCCAGTT+CGG | - | chr2.4:39476903-39476922 | MS.gene036365:CDS | 35.0% | |
| GACCAAGTCATAGAATATGA+CGG | - | chr2.4:39476727-39476746 | MS.gene036365:intron | 35.0% | |
| GATAATAATCCTGAAGTTGG+AGG | - | chr2.4:39476991-39477010 | MS.gene036365:intron | 35.0% | |
| GCAAATGTACAGTGTAATTG+TGG | - | chr2.4:39474523-39474542 | MS.gene036365:CDS | 35.0% | |
| GCTTAGAAGTTCACAAATGT+TGG | - | chr2.4:39477089-39477108 | MS.gene036365:intron | 35.0% | |
| GGTGATAATAATCCTGAAGT+TGG | - | chr2.4:39476988-39477007 | MS.gene036365:intron | 35.0% | |
| GTGTTACACTGAAAAACGTA+AGG | - | chr2.4:39475319-39475338 | MS.gene036365:CDS | 35.0% | |
| TGGAATGTCAAACAGAATGT+GGG | - | chr2.4:39476387-39476406 | MS.gene036365:intron | 35.0% | |
| TGTAGATTCCTTGGTGAAAA+AGG | - | chr2.4:39476690-39476709 | MS.gene036365:intron | 35.0% | |
| TGTGTTGAAAACTTGACAGA+AGG | + | chr2.4:39475251-39475270 | None:intergenic | 35.0% | |
| TTAGAGAAGAGTGATATGGA+TGG | + | chr2.4:39476300-39476319 | None:intergenic | 35.0% | |
| TTGAAATACCTAGCTAAACC+AGG | + | chr2.4:39474247-39474266 | None:intergenic | 35.0% | |
| ! | ACCTTTTCAATACAGGTACT+TGG | - | chr2.4:39476361-39476380 | MS.gene036365:intron | 35.0% |
| ! | AGATTTGCAAGTTAGTCTCA+AGG | - | chr2.4:39475775-39475794 | MS.gene036365:CDS | 35.0% |
| ! | CTTTGAAAGCCATGAAGTAA+AGG | - | chr2.4:39475721-39475740 | MS.gene036365:CDS | 35.0% |
| ! | GTTTTTCATAGGGACTAAAC+TGG | + | chr2.4:39475183-39475202 | None:intergenic | 35.0% |
| ! | TAAGTTGAATGTTGTTGTGC+TGG | - | chr2.4:39475652-39475671 | MS.gene036365:CDS | 35.0% |
| ! | TTCAACTTAGCAACTGATTC+TGG | + | chr2.4:39475641-39475660 | None:intergenic | 35.0% |
| !! | ATCATATGCCTTTTTCACCA+AGG | + | chr2.4:39476701-39476720 | None:intergenic | 35.0% |
| !! | ATGAGGAAGTTGATGATGAT+TGG | - | chr2.4:39475687-39475706 | MS.gene036365:CDS | 35.0% |
| !! | CTCACAATTTTTCTGAGAAG+AGG | + | chr2.4:39474596-39474615 | None:intergenic | 35.0% |
| !! | GTGGCATTCTTGTTCTAAAA+TGG | + | chr2.4:39475520-39475539 | None:intergenic | 35.0% |
| !! | TGTAATTGTGGAAGCATTGA+AGG | - | chr2.4:39474535-39474554 | MS.gene036365:CDS | 35.0% |
| !!! | TGATACATTTTAGTTGTGCC+AGG | - | chr2.4:39475447-39475466 | MS.gene036365:intron | 35.0% |
| AAGACGCAGGAAATCTTCTA+CGG | + | chr2.4:39476218-39476237 | None:intergenic | 40.0% | |
| AAGGAAGGAGTAGGAACATT+AGG | - | chr2.4:39475794-39475813 | MS.gene036365:CDS | 40.0% | |
| ACAGATGTCTGTAGATTCCT+TGG | - | chr2.4:39476681-39476700 | MS.gene036365:intron | 40.0% | |
| ACCATGAATTACAACATGCC+AGG | - | chr2.4:39476967-39476986 | MS.gene036365:intron | 40.0% | |
| ACCTGGCATGTTGTAATTCA+TGG | + | chr2.4:39476971-39476990 | None:intergenic | 40.0% | |
| ACGGGAAATGTTGTTCAAGT+TGG | - | chr2.4:39475614-39475633 | MS.gene036365:CDS | 40.0% | |
| ACTGATGAAACTCATAGCAC+TGG | - | chr2.4:39476469-39476488 | MS.gene036365:intron | 40.0% | |
| AGGGACTAAACTGGAATTTG+TGG | + | chr2.4:39475174-39475193 | None:intergenic | 40.0% | |
| AGTCATCCATGTTGTCTTGT+TGG | - | chr2.4:39475583-39475602 | MS.gene036365:CDS | 40.0% | |
| AGTTCGGATTATCAGATGGT+AGG | - | chr2.4:39476919-39476938 | MS.gene036365:CDS | 40.0% | |
| ATCCAGTTCGGATTATCAGA+TGG | - | chr2.4:39476915-39476934 | MS.gene036365:CDS | 40.0% | |
| ATGTTGTAATTCATGGTCCC+TGG | + | chr2.4:39476964-39476983 | None:intergenic | 40.0% | |
| CAAAACTACCTGGTTTAGCT+AGG | - | chr2.4:39474236-39474255 | MS.gene036365:CDS | 40.0% | |
| CAAACTTCATCATGCAAAGC+TGG | + | chr2.4:39476130-39476149 | None:intergenic | 40.0% | |
| CAGCTTTGCATGATGAAGTT+TGG | - | chr2.4:39476128-39476147 | MS.gene036365:intron | 40.0% | |
| CTCCGTCATATTCTATGACT+TGG | + | chr2.4:39476732-39476751 | None:intergenic | 40.0% | |
| CTGAACGAATGATACATCTG+AGG | + | chr2.4:39477213-39477232 | None:intergenic | 40.0% | |
| CTTACAGGTAAGTGAAGAAG+TGG | - | chr2.4:39474814-39474833 | MS.gene036365:intron | 40.0% | |
| GAAATTGGACCATGCTAAAC+TGG | - | chr2.4:39474850-39474869 | MS.gene036365:intron | 40.0% | |
| GATGTATCATTCGTTCAGTG+AGG | - | chr2.4:39477215-39477234 | MS.gene036365:intron | 40.0% | |
| GCATGATGAAGTTTGGAGAT+TGG | - | chr2.4:39476135-39476154 | MS.gene036365:intron | 40.0% | |
| GCTTCTTTGACTGAGTAAGA+TGG | + | chr2.4:39474216-39474235 | None:intergenic | 40.0% | |
| GTGGAATGTCAAACAGAATG+TGG | - | chr2.4:39476386-39476405 | MS.gene036365:intron | 40.0% | |
| GTTCGGATTATCAGATGGTA+GGG | - | chr2.4:39476920-39476939 | MS.gene036365:CDS | 40.0% | |
| TAATGCGTACATTCATCCAC+GGG | + | chr2.4:39475114-39475133 | None:intergenic | 40.0% | |
| TACCATCTGATAATCCGAAC+TGG | + | chr2.4:39476920-39476939 | None:intergenic | 40.0% | |
| TCAAAGAAGCCAAAACTACC+TGG | - | chr2.4:39474226-39474245 | MS.gene036365:CDS | 40.0% | |
| TCAATACAGGTACTTGGTAG+TGG | - | chr2.4:39476367-39476386 | MS.gene036365:intron | 40.0% | |
| TCTCAGCAGCCTAAAATTTC+AGG | - | chr2.4:39475415-39475434 | MS.gene036365:intron | 40.0% | |
| TGAACAACATTTCCCGTGTT+TGG | + | chr2.4:39475611-39475630 | None:intergenic | 40.0% | |
| TGAGGATAATGTCAAGTGCT+CGG | - | chr2.4:39477233-39477252 | MS.gene036365:intron | 40.0% | |
| TGCAAATCTCCAGTTAGAAG+TGG | + | chr2.4:39475764-39475783 | None:intergenic | 40.0% | |
| TGGAAGGTGATGATATGCAA+AGG | - | chr2.4:39477109-39477128 | MS.gene036365:intron | 40.0% | |
| TTGAATGTTGTTGTGCTGGA+AGG | - | chr2.4:39475656-39475675 | MS.gene036365:CDS | 40.0% | |
| TTGGTTCCAACAAGACAACA+TGG | + | chr2.4:39475592-39475611 | None:intergenic | 40.0% | |
| ! | CTAGCTAAACCAGGTAGTTT+TGG | + | chr2.4:39474238-39474257 | None:intergenic | 40.0% |
| ! | GAGACGGATCCTGAAATTTT+AGG | + | chr2.4:39475427-39475446 | None:intergenic | 40.0% |
| ! | GTTTGCCACCTTTTCAATAC+AGG | - | chr2.4:39476354-39476373 | MS.gene036365:intron | 40.0% |
| ! | TGTCTTGTTGGAACCAAACA+CGG | - | chr2.4:39475595-39475614 | MS.gene036365:CDS | 40.0% |
| ! | TTGCAAGTTAGTCTCAAGGA+AGG | - | chr2.4:39475779-39475798 | MS.gene036365:CDS | 40.0% |
| !! | AATTGTGGAAGCATTGAAGG+TGG | - | chr2.4:39474538-39474557 | MS.gene036365:CDS | 40.0% |
| !! | ACGTTTTTCAGTGTAACACG+CGG | + | chr2.4:39475318-39475337 | None:intergenic | 40.0% |
| !! | AGCTTAAAGCAGCTTTAAGG+TGG | - | chr2.4:39477280-39477299 | MS.gene036365:CDS | 40.0% |
| !! | ATTATCATGGAGACTGGTCT+AGG | - | chr2.4:39477019-39477038 | MS.gene036365:intron | 40.0% |
| !! | CTTAAAGCAGCTTTAAGGTG+GGG | - | chr2.4:39477282-39477301 | MS.gene036365:CDS | 40.0% |
| !! | GCTGGAAGGTGATTTTAATG+AGG | - | chr2.4:39475670-39475689 | MS.gene036365:CDS | 40.0% |
| !! | GCTTAAAGCAGCTTTAAGGT+GGG | - | chr2.4:39477281-39477300 | MS.gene036365:CDS | 40.0% |
| !! | GTTTAGACTTGGTGTTAAGG+TGG | - | chr2.4:39475862-39475881 | MS.gene036365:CDS | 40.0% |
| !! | TGCAGATTTTGATCCCCTTT+TGG | + | chr2.4:39476779-39476798 | None:intergenic | 40.0% |
| !! | TTCTTAATTTCTGAGGCTCG+CGG | + | chr2.4:39476246-39476265 | None:intergenic | 40.0% |
| ACCATGCTAAACTGGTTGAC+AGG | - | chr2.4:39474858-39474877 | MS.gene036365:intron | 45.0% | |
| ACCTGTCAACCAGTTTAGCA+TGG | + | chr2.4:39474862-39474881 | None:intergenic | 45.0% | |
| ACGTTGTCGCAGAAGAACTT+CGG | - | chr2.4:39477067-39477086 | MS.gene036365:intron | 45.0% | |
| ACTTCATCATGCAAAGCTGG+TGG | + | chr2.4:39476127-39476146 | None:intergenic | 45.0% | |
| AGGATAATGTCAAGTGCTCG+GGG | - | chr2.4:39477235-39477254 | MS.gene036365:intron | 45.0% | |
| AGTACCCAACACACATGTCT+TGG | + | chr2.4:39476431-39476450 | None:intergenic | 45.0% | |
| ATGAAGTAAAGGAACGCGAG+GGG | - | chr2.4:39475732-39475751 | MS.gene036365:CDS | 45.0% | |
| ATGCCACCTCACTTATTCAC+AGG | - | chr2.4:39475533-39475552 | MS.gene036365:intron | 45.0% | |
| CACCTCACTTATTCACAGGA+GGG | - | chr2.4:39475537-39475556 | MS.gene036365:intron | 45.0% | |
| CATGAAGTAAAGGAACGCGA+GGG | - | chr2.4:39475731-39475750 | MS.gene036365:CDS | 45.0% | |
| CATGCCAAGACATGTGTGTT+GGG | - | chr2.4:39476424-39476443 | MS.gene036365:intron | 45.0% | |
| CTAAGAGGTCTCATTGCTGA+TGG | - | chr2.4:39476517-39476536 | MS.gene036365:intron | 45.0% | |
| CTTCACTTACCTGTAAGCCA+CGG | + | chr2.4:39474811-39474830 | None:intergenic | 45.0% | |
| GAGATTGGATCGGATAGCAA+AGG | - | chr2.4:39476150-39476169 | MS.gene036365:intron | 45.0% | |
| GAGGATAATGTCAAGTGCTC+GGG | - | chr2.4:39477234-39477253 | MS.gene036365:intron | 45.0% | |
| GCAAAGACTCTGCTCATCTT+TGG | - | chr2.4:39474568-39474587 | MS.gene036365:CDS | 45.0% | |
| GTTCTAATTCCGTGGCTTAC+AGG | - | chr2.4:39474799-39474818 | MS.gene036365:CDS | 45.0% | |
| TCACTTATTCACAGGAGGGA+AGG | - | chr2.4:39475541-39475560 | MS.gene036365:intron | 45.0% | |
| TTCCCTCCTGTGAATAAGTG+AGG | + | chr2.4:39475542-39475561 | None:intergenic | 45.0% | |
| TTGGATCGGATAGCAAAGGA+TGG | - | chr2.4:39476154-39476173 | MS.gene036365:intron | 45.0% | |
| ! | GTCTTGTTGGAACCAAACAC+GGG | - | chr2.4:39475596-39475615 | MS.gene036365:CDS | 45.0% |
| ! | GTTAGTCTCAAGGAAGGAGT+AGG | - | chr2.4:39475785-39475804 | MS.gene036365:CDS | 45.0% |
| ACAGAAGGACCAACGTGTCT+CGG | + | chr2.4:39475236-39475255 | None:intergenic | 50.0% | |
| AGAGCAGCATGCATCTGCAA+AGG | - | chr2.4:39476831-39476850 | MS.gene036365:intron | 50.0% | |
| AGCATGCATCTGCAAAGGGA+AGG | - | chr2.4:39476836-39476855 | MS.gene036365:intron | 50.0% | |
| ATTCACAGGAGGGAAGGTTG+AGG | - | chr2.4:39475547-39475566 | MS.gene036365:intron | 50.0% | |
| CAGAATGTGGGAGAACACTG+TGG | - | chr2.4:39476399-39476418 | MS.gene036365:intron | 50.0% | |
| CCACCTCACTTATTCACAGG+AGG | - | chr2.4:39475536-39475555 | MS.gene036365:intron | 50.0% | |
| CCATGAAGTAAAGGAACGCG+AGG | - | chr2.4:39475730-39475749 | MS.gene036365:CDS | 50.0% | |
| CCTCCTGTGAATAAGTGAGG+TGG | + | chr2.4:39475539-39475558 | None:intergenic | 50.0% | |
| CCTCGCGTTCCTTTACTTCA+TGG | + | chr2.4:39475733-39475752 | None:intergenic | 50.0% | |
| CCTGGTGCTTCTATTCTTGG+CGG | + | chr2.4:39475479-39475498 | None:intergenic | 50.0% | |
| CGAATCCCGTCACAATATCC+AGG | + | chr2.4:39475890-39475909 | None:intergenic | 50.0% | |
| CTAGGCAGAGAAACGGACAA+GGG | - | chr2.4:39477037-39477056 | MS.gene036365:intron | 50.0% | |
| GAGCAGCATGCATCTGCAAA+GGG | - | chr2.4:39476832-39476851 | MS.gene036365:intron | 50.0% | |
| GCATGCATCTGCAAAGGGAA+GGG | - | chr2.4:39476837-39476856 | MS.gene036365:intron | 50.0% | |
| GCATGCCAAGACATGTGTGT+TGG | - | chr2.4:39476423-39476442 | MS.gene036365:intron | 50.0% | |
| GGGAAAAGGCCACTTCTAAC+TGG | - | chr2.4:39475752-39475771 | MS.gene036365:CDS | 50.0% | |
| GTGGCTCCTGGATATTGTGA+CGG | - | chr2.4:39475881-39475900 | MS.gene036365:CDS | 50.0% | |
| TAAAGGAACGCGAGGGGAAA+AGG | - | chr2.4:39475738-39475757 | MS.gene036365:CDS | 50.0% | |
| TAATGTCAAGTGCTCGGGGA+AGG | - | chr2.4:39477239-39477258 | MS.gene036365:intron | 50.0% | |
| TATTCTTGGCGGTGAAGACC+TGG | + | chr2.4:39475468-39475487 | None:intergenic | 50.0% | |
| TCCCCTGGTGCTTCTATTCT+TGG | + | chr2.4:39475482-39475501 | None:intergenic | 50.0% | |
| TCTAGGCAGAGAAACGGACA+AGG | - | chr2.4:39477036-39477055 | MS.gene036365:intron | 50.0% | |
| TGAAGAAGTGGAGCGTGCTT+TGG | - | chr2.4:39474826-39474845 | MS.gene036365:intron | 50.0% | |
| TGGCTCCTGGATATTGTGAC+GGG | - | chr2.4:39475882-39475901 | MS.gene036365:CDS | 50.0% | |
| TTCACAGGAGGGAAGGTTGA+GGG | - | chr2.4:39475548-39475567 | MS.gene036365:intron | 50.0% | |
| ! | AGCTGCAGATTCTTTTCCCC+TGG | + | chr2.4:39475497-39475516 | None:intergenic | 50.0% |
| !! | CGCCAAGAATAGAAGCACCA+GGG | - | chr2.4:39475477-39475496 | MS.gene036365:intron | 50.0% |
| !! | GACTGGTCTAGGCAGAGAAA+CGG | - | chr2.4:39477030-39477049 | MS.gene036365:intron | 50.0% |
| !! | GCCAAGAATAGAAGCACCAG+GGG | - | chr2.4:39475478-39475497 | MS.gene036365:intron | 50.0% |
| GCAGAGAAACGGACAAGGGT+TGG | - | chr2.4:39477041-39477060 | MS.gene036365:intron | 55.0% | |
| GGAGCGTGCTTTGGCGAAAT+TGG | - | chr2.4:39474835-39474854 | MS.gene036365:intron | 55.0% | |
| !! | CCGCCAAGAATAGAAGCACC+AGG | - | chr2.4:39475476-39475495 | MS.gene036365:intron | 55.0% |
| !! | CTTGGTGTTAAGGTGGCTCC+TGG | - | chr2.4:39475869-39475888 | MS.gene036365:CDS | 55.0% |
| GACGGGATTCGAGTGCGTGA+AGG | - | chr2.4:39475899-39475918 | MS.gene036365:CDS | 60.0% | |
| GCTCGGGGAAGGCTGTTGTT+GGG | - | chr2.4:39477250-39477269 | MS.gene036365:intron | 60.0% | |
| GGGAAGGTTGAGGGAGAGCA+AGG | - | chr2.4:39475557-39475576 | MS.gene036365:CDS | 60.0% | |
| TGCTCGGGGAAGGCTGTTGT+TGG | - | chr2.4:39477249-39477268 | MS.gene036365:intron | 60.0% | |
| CGGGGAAGGCTGTTGTTGGG+TGG | - | chr2.4:39477253-39477272 | MS.gene036365:intron | 65.0% | |
| GCTCGCGGACAAGAAGACGC+AGG | + | chr2.4:39476231-39476250 | None:intergenic | 65.0% | |
| ! | GCTAGGCATGATGACGCCCG+TGG | - | chr2.4:39475095-39475114 | MS.gene036365:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 39474151 | 39477362 | 39474151 | ID=MS.gene036365 |
| chr2.4 | mRNA | 39474151 | 39477362 | 39474151 | ID=MS.gene036365.t1;Parent=MS.gene036365 |
| chr2.4 | exon | 39477256 | 39477362 | 39477256 | ID=MS.gene036365.t1.exon1;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39477256 | 39477362 | 39477256 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39476903 | 39476978 | 39476903 | ID=MS.gene036365.t1.exon2;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39476903 | 39476978 | 39476903 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39476634 | 39476692 | 39476634 | ID=MS.gene036365.t1.exon3;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39476634 | 39476692 | 39476634 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39475551 | 39476044 | 39475551 | ID=MS.gene036365.t1.exon4;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39475551 | 39476044 | 39475551 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39475246 | 39475406 | 39475246 | ID=MS.gene036365.t1.exon5;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39475246 | 39475406 | 39475246 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39474934 | 39475137 | 39474934 | ID=MS.gene036365.t1.exon6;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39474934 | 39475137 | 39474934 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| chr2.4 | exon | 39474151 | 39474828 | 39474151 | ID=MS.gene036365.t1.exon7;Parent=MS.gene036365.t1 |
| chr2.4 | CDS | 39474151 | 39474828 | 39474151 | ID=cds.MS.gene036365.t1;Parent=MS.gene036365.t1 |
| Gene Sequence |
| Protein sequence |
