Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67632.t1 | XP_013463825.1 | 98.2 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.00E+00 | 1162.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67632.t1 | F4IPM3 | 61.6 | 614 | 197 | 10 | 9 | 598 | 1 | 599 | 2.2e-201 | 703.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67632.t1 | A0A072VIC7 | 98.2 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.0e+00 | 1162.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67632 | MS.gene68707 | PPI |
MS.gene67632 | MS.gene90557 | PPI |
MS.gene036365 | MS.gene67632 | PPI |
MS.gene90557 | MS.gene67632 | PPI |
MS.gene67632 | MS.gene036365 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67632.t1 | MTR_2g450080 | 98.161 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.0 | 1216 |
MS.gene67632.t1 | MTR_4g090970 | 54.127 | 630 | 236 | 11 | 8 | 598 | 12 | 627 | 0.0 | 631 |
MS.gene67632.t1 | MTR_2g011810 | 53.689 | 637 | 246 | 10 | 1 | 598 | 6 | 632 | 0.0 | 623 |
MS.gene67632.t1 | MTR_4g128600 | 53.181 | 613 | 232 | 8 | 35 | 598 | 29 | 635 | 0.0 | 618 |
MS.gene67632.t1 | MTR_8g104510 | 45.269 | 391 | 205 | 7 | 11 | 398 | 4 | 388 | 6.03e-107 | 330 |
MS.gene67632.t1 | MTR_6g083730 | 40.940 | 447 | 244 | 7 | 11 | 443 | 4 | 444 | 4.58e-105 | 326 |
MS.gene67632.t1 | MTR_8g104490 | 41.099 | 455 | 244 | 10 | 11 | 459 | 4 | 440 | 1.82e-104 | 324 |
MS.gene67632.t1 | MTR_4g106810 | 46.556 | 363 | 189 | 4 | 26 | 387 | 10 | 368 | 7.03e-102 | 320 |
MS.gene67632.t1 | MTR_8g104490 | 41.644 | 365 | 193 | 6 | 100 | 460 | 28 | 376 | 6.22e-91 | 287 |
MS.gene67632.t1 | MTR_6g083320 | 45.608 | 296 | 157 | 3 | 11 | 303 | 4 | 298 | 9.30e-83 | 266 |
MS.gene67632.t1 | MTR_7g112000 | 36.066 | 366 | 204 | 11 | 49 | 401 | 31 | 379 | 6.33e-58 | 203 |
MS.gene67632.t1 | MTR_7g111980 | 28.645 | 583 | 322 | 20 | 51 | 598 | 51 | 574 | 2.43e-46 | 172 |
MS.gene67632.t1 | MTR_7g111980 | 28.810 | 538 | 296 | 19 | 96 | 598 | 6 | 491 | 2.96e-44 | 164 |
MS.gene67632.t1 | MTR_7g111960 | 33.233 | 331 | 212 | 6 | 59 | 385 | 60 | 385 | 4.34e-44 | 166 |
MS.gene67632.t1 | MTR_6g083810 | 35.878 | 131 | 81 | 2 | 11 | 139 | 4 | 133 | 3.16e-18 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67632.t1 | AT2G24300 | 60.828 | 628 | 191 | 11 | 1 | 598 | 1 | 603 | 0.0 | 729 |
MS.gene67632.t1 | AT2G24300 | 60.968 | 620 | 191 | 10 | 9 | 598 | 1 | 599 | 0.0 | 728 |
MS.gene67632.t1 | AT4G31000 | 59.766 | 599 | 203 | 8 | 1 | 598 | 1 | 562 | 0.0 | 692 |
MS.gene67632.t1 | AT2G24300 | 60.854 | 562 | 173 | 8 | 67 | 598 | 8 | 552 | 0.0 | 663 |
MS.gene67632.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
MS.gene67632.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
MS.gene67632.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
MS.gene67632.t1 | AT5G57580 | 50.840 | 655 | 244 | 13 | 1 | 595 | 1 | 637 | 0.0 | 604 |
MS.gene67632.t1 | AT4G25800 | 54.915 | 590 | 230 | 10 | 35 | 598 | 16 | 595 | 0.0 | 598 |
MS.gene67632.t1 | AT4G25800 | 54.915 | 590 | 230 | 10 | 35 | 598 | 16 | 595 | 0.0 | 598 |
MS.gene67632.t1 | AT4G31000 | 53.654 | 602 | 214 | 10 | 1 | 598 | 1 | 541 | 0.0 | 597 |
MS.gene67632.t1 | AT5G62570 | 44.180 | 378 | 198 | 9 | 41 | 412 | 13 | 383 | 4.88e-99 | 310 |
MS.gene67632.t1 | AT5G62570 | 43.947 | 380 | 200 | 9 | 39 | 412 | 26 | 398 | 7.68e-99 | 310 |
MS.gene67632.t1 | AT5G62570 | 45.349 | 344 | 177 | 8 | 39 | 378 | 26 | 362 | 1.65e-94 | 295 |
MS.gene67632.t1 | AT1G73805 | 40.127 | 471 | 243 | 14 | 11 | 475 | 4 | 441 | 1.17e-90 | 287 |
MS.gene67632.t1 | AT5G62570 | 47.778 | 270 | 131 | 7 | 39 | 305 | 26 | 288 | 1.24e-74 | 240 |
MS.gene67632.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 42 | 389 | 28 | 363 | 5.97e-74 | 243 |
MS.gene67632.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 42 | 389 | 28 | 363 | 8.30e-73 | 244 |
MS.gene67632.t1 | AT5G26920 | 38.920 | 352 | 187 | 10 | 42 | 389 | 28 | 355 | 1.44e-70 | 238 |
Find 141 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCCTGGTGCTTCTATTCT+TGG | 0.164360 | 2.2:+34554729 | None:intergenic |
TTTCTCAACTTTATTGTTCT+TGG | 0.176255 | 2.2:+34556051 | None:intergenic |
TAATAATTACCTCCAATTTC+AGG | 0.231327 | 2.2:+34553220 | None:intergenic |
GTGGCATTCTTGTTCTAAAA+TGG | 0.234537 | 2.2:+34554691 | None:intergenic |
TTAAGCTTAAAGCAGCTTTA+AGG | 0.234780 | 2.2:-34552943 | MS.gene67632:CDS |
ATTAATGAAGGAGCTAATTT+TGG | 0.248045 | 2.2:-34553076 | MS.gene67632:CDS |
CTAGCTAAACCAGGTAGTTT+TGG | 0.249092 | 2.2:+34555962 | None:intergenic |
TTTAACTTCGCAACTGATTC+TGG | 0.253100 | 2.2:+34554570 | None:intergenic |
GGAGCGTGCTTTGGCGAAAT+TGG | 0.266457 | 2.2:-34555373 | MS.gene67632:CDS |
GCAAAGACTCTGCTCATCTT+TGG | 0.274845 | 2.2:-34555643 | MS.gene67632:CDS |
TACTGATTTCGATCCCCTTT+TGG | 0.278841 | 2.2:+34553447 | None:intergenic |
TGAACAACATTTCCCGTGTT+TGG | 0.304757 | 2.2:+34554600 | None:intergenic |
CTGCTTTGCATGATGAAGTT+TGG | 0.307314 | 2.2:-34554081 | MS.gene67632:CDS |
TGTAGATTCCTTGGTGAAAA+AGG | 0.308211 | 2.2:-34553533 | MS.gene67632:CDS |
GGAGATAATAATCCTGAAAT+TGG | 0.329346 | 2.2:-34553232 | MS.gene67632:CDS |
TCCTGACATATTGTAATTCA+TGG | 0.332092 | 2.2:+34553252 | None:intergenic |
GAAATTGGACCATGCTAAAC+TGG | 0.335370 | 2.2:-34555358 | MS.gene67632:CDS |
ATGAGGAAATTGATGATGAT+TGG | 0.358972 | 2.2:-34554521 | MS.gene67632:CDS |
GGGAAAAGGCCACTTCTAAC+TGG | 0.383127 | 2.2:-34554456 | MS.gene67632:CDS |
AAGGAAGGAGTAGGAACATT+AGG | 0.389807 | 2.2:-34554414 | MS.gene67632:CDS |
GCATGATGAAGTTTGGAGAT+TGG | 0.410980 | 2.2:-34554074 | MS.gene67632:CDS |
CCTCGCGTTCCTTTACTTCG+TGG | 0.416281 | 2.2:+34554478 | None:intergenic |
TTCTTTGACTAATTCCAAAA+GGG | 0.417389 | 2.2:-34553461 | MS.gene67632:CDS |
CAGATGCATACTGCTGCTCT+TGG | 0.421224 | 2.2:+34553395 | None:intergenic |
TAAAGGAACGCGAGGGGAAA+AGG | 0.424802 | 2.2:-34554470 | MS.gene67632:CDS |
ATTGGAGGTAATTATTATCA+TGG | 0.428342 | 2.2:-34553214 | MS.gene67632:CDS |
TGCTCAGGCAAGGCTGTTGT+TGG | 0.429293 | 2.2:-34552971 | MS.gene67632:CDS |
TGAAGAAGTGGAGCGTGCTT+TGG | 0.435844 | 2.2:-34555382 | MS.gene67632:CDS |
ATTCTTTGACTAATTCCAAA+AGG | 0.441002 | 2.2:-34553462 | MS.gene67632:CDS |
TCGCAGAAGAACTTCGGCTT+AGG | 0.447943 | 2.2:-34553147 | MS.gene67632:CDS |
ATCACTCACTTCAAATCAAA+AGG | 0.454320 | 2.2:-34553648 | MS.gene67632:intron |
AGTCATCCATGTTGTCTTGT+TGG | 0.456149 | 2.2:-34554625 | MS.gene67632:CDS |
AAAGTTTAGACTTGGTGTTA+AGG | 0.456288 | 2.2:-34554349 | MS.gene67632:CDS |
CCTGGTGCTTCTATTCTTGG+CGG | 0.458356 | 2.2:+34554732 | None:intergenic |
TACCATCTGATAATCCGAAC+TGG | 0.468563 | 2.2:+34553303 | None:intergenic |
CTTGGTGTTAAGGTGGCTCC+TGG | 0.469576 | 2.2:-34554339 | MS.gene67632:CDS |
GTGATTCTAAAGAAAAGAAC+TGG | 0.470764 | 2.2:+34553666 | None:intergenic |
TCAATACAGGTACTTGGTAG+TGG | 0.472613 | 2.2:-34553839 | MS.gene67632:intron |
CTCCATCATATTCTATGACT+TGG | 0.480405 | 2.2:+34553494 | None:intergenic |
ATTATCATGGAGACTGGTCT+AGG | 0.480685 | 2.2:-34553201 | MS.gene67632:CDS |
GCTTAGGAGTTCGCAAATGT+TGG | 0.483183 | 2.2:-34553131 | MS.gene67632:CDS |
TTCACAGGAGGGAAGGTTGA+GGG | 0.486109 | 2.2:-34554660 | MS.gene67632:CDS |
CTTTCACTGATAATTCTAGC+TGG | 0.486782 | 2.2:-34554383 | MS.gene67632:CDS |
ACCATGAATTACAATATGTC+AGG | 0.487561 | 2.2:-34553253 | MS.gene67632:CDS |
GCTTCTTTGATTGAGTAAGA+TGG | 0.488191 | 2.2:+34555984 | None:intergenic |
CTTTGAAAGCCACGAAGTAA+AGG | 0.491383 | 2.2:-34554487 | MS.gene67632:CDS |
GGGAAGGTTGAGGGAGAGCA+AGG | 0.502361 | 2.2:-34554651 | MS.gene67632:CDS |
AGCTTAAAGCAGCTTTAAGG+TGG | 0.507495 | 2.2:-34552940 | MS.gene67632:CDS |
ACGGGAAATGTTGTTCAAGT+TGG | 0.508647 | 2.2:-34554594 | MS.gene67632:CDS |
CAGGCAAGGCTGTTGTTGGG+TGG | 0.514153 | 2.2:-34552967 | MS.gene67632:CDS |
CAAAACTACCTGGTTTAGCT+AGG | 0.519085 | 2.2:-34555961 | MS.gene67632:intron |
CGAATCCCGTCACAATATCC+AGG | 0.519800 | 2.2:+34554321 | None:intergenic |
TAGGAGTTCGCAAATGTTGG+AGG | 0.522224 | 2.2:-34553128 | MS.gene67632:CDS |
TGTAATTGTGGAAGCATTGA+AGG | 0.522949 | 2.2:-34555676 | MS.gene67632:CDS |
CAAACTTCATCATGCAAAGC+AGG | 0.525398 | 2.2:+34554082 | None:intergenic |
GAGGATAATGTCAAGTGCTC+AGG | 0.527975 | 2.2:-34552986 | MS.gene67632:CDS |
CATGCCAAGACATGTGTGTT+GGG | 0.529035 | 2.2:-34553782 | MS.gene67632:CDS |
GTAATTATTATCATGGAGAC+TGG | 0.529490 | 2.2:-34553207 | MS.gene67632:CDS |
GCAGATGTCTGTAGATTCCT+TGG | 0.531398 | 2.2:-34553542 | MS.gene67632:intron |
TTACTTAAGACTATTAATGA+AGG | 0.533466 | 2.2:-34553088 | MS.gene67632:CDS |
GCTCAGGCAAGGCTGTTGTT+GGG | 0.534129 | 2.2:-34552970 | MS.gene67632:CDS |
ATTCACAGGAGGGAAGGTTG+AGG | 0.534510 | 2.2:-34554661 | MS.gene67632:CDS |
CTTACACTTCTTAATTTCTG+AGG | 0.537502 | 2.2:+34553959 | None:intergenic |
CAGCAGTATGCATCTGCAAA+GGG | 0.538227 | 2.2:-34553388 | MS.gene67632:CDS |
CCGCCAAGAATAGAAGCACC+AGG | 0.541056 | 2.2:-34554732 | MS.gene67632:CDS |
AGATTTGCAAGTTAGTCTAA+AGG | 0.541446 | 2.2:-34554433 | MS.gene67632:CDS |
GACTGGTCTAGGCAGAGAAA+CGG | 0.545642 | 2.2:-34553190 | MS.gene67632:CDS |
GCTTAAAGCAGCTTTAAGGT+GGG | 0.551907 | 2.2:-34552939 | MS.gene67632:CDS |
GATAATAATCCTGAAATTGG+AGG | 0.552098 | 2.2:-34553229 | MS.gene67632:CDS |
AGTTCGGATTATCAGATGGT+AGG | 0.552487 | 2.2:-34553301 | MS.gene67632:CDS |
TGGCTCCTGGATATTGTGAC+GGG | 0.555314 | 2.2:-34554326 | MS.gene67632:CDS |
TTTGCTGTTAAAGATCATAG+AGG | 0.555812 | 2.2:-34554273 | MS.gene67632:CDS |
GACCAAGTCATAGAATATGA+TGG | 0.555949 | 2.2:-34553496 | MS.gene67632:CDS |
CTAAGAGGTCTCATTGCTGA+TGG | 0.560083 | 2.2:-34553689 | MS.gene67632:CDS |
GTTCGGATTATCAGATGGTA+GGG | 0.561192 | 2.2:-34553300 | MS.gene67632:CDS |
AGTACCCAACACACATGTCT+TGG | 0.562839 | 2.2:+34553778 | None:intergenic |
AGAAGCAGAAAGTTTAGACT+TGG | 0.563077 | 2.2:-34554357 | MS.gene67632:CDS |
GAAGTTAAATGTTGTTGTGC+TGG | 0.563996 | 2.2:-34554556 | MS.gene67632:CDS |
ATGAAGTTTGGAGATTGGAT+CGG | 0.564012 | 2.2:-34554069 | MS.gene67632:CDS |
ACATTGTCGCAGAAGAACTT+CGG | 0.565117 | 2.2:-34553153 | MS.gene67632:CDS |
TGTCTTGTTGGATCCAAACA+CGG | 0.566446 | 2.2:-34554613 | MS.gene67632:CDS |
ACATCACAAATAGCATTACC+AGG | 0.566533 | 2.2:-34553277 | MS.gene67632:CDS |
GAATAACTACTCATCCAGTT+CGG | 0.566553 | 2.2:-34553317 | MS.gene67632:CDS |
GTTTAGACTTGGTGTTAAGG+TGG | 0.566982 | 2.2:-34554346 | MS.gene67632:CDS |
GTTAGTCTAAAGGAAGGAGT+AGG | 0.569301 | 2.2:-34554423 | MS.gene67632:CDS |
CTTAAAGCAGCTTTAAGGTG+GGG | 0.570067 | 2.2:-34552938 | MS.gene67632:CDS |
TTGCAAGTTAGTCTAAAGGA+AGG | 0.570603 | 2.2:-34554429 | MS.gene67632:CDS |
TCAAAGAAGCCAAAACTACC+TGG | 0.573508 | 2.2:-34555971 | MS.gene67632:CDS |
ATATTGTAATTCATGGTCCC+TGG | 0.574844 | 2.2:+34553259 | None:intergenic |
TCACTTATTCACAGGAGGGA+AGG | 0.579079 | 2.2:-34554667 | MS.gene67632:CDS |
TGCAAATCTCCAGTTAGAAG+TGG | 0.579936 | 2.2:+34554447 | None:intergenic |
TGACGGGATTCGAGTGCGTG+AGG | 0.580615 | 2.2:-34554310 | MS.gene67632:CDS |
GTGGAATGTCAAACAGAATG+TGG | 0.581489 | 2.2:-34553820 | MS.gene67632:CDS |
ATGCCACCTCACTTATTCAC+AGG | 0.582197 | 2.2:-34554675 | MS.gene67632:CDS |
GTCTTGTTGGATCCAAACAC+GGG | 0.582870 | 2.2:-34554612 | MS.gene67632:CDS |
GCAGCAGTATGCATCTGCAA+AGG | 0.584416 | 2.2:-34553389 | MS.gene67632:CDS |
GCAAATGTACAGTGTAATTG+TGG | 0.585229 | 2.2:-34555688 | MS.gene67632:intron |
ACCATGCTAAACTGGGTGAC+AGG | 0.585986 | 2.2:-34555350 | MS.gene67632:intron |
TCTTTGACTAATTCCAAAAG+GGG | 0.586778 | 2.2:-34553460 | MS.gene67632:CDS |
CTTACAGGTAAGTGAAGAAG+TGG | 0.588186 | 2.2:-34555394 | MS.gene67632:intron |
TTATGATGATGTAGCTAATG+AGG | 0.592406 | 2.2:-34556023 | MS.gene67632:CDS |
TGATGTAGCTAATGAGGATG+AGG | 0.592955 | 2.2:-34556017 | MS.gene67632:CDS |
GTGGCTCCTGGATATTGTGA+CGG | 0.594325 | 2.2:-34554327 | MS.gene67632:CDS |
GTATGCATCTGCAAAGGGAA+GGG | 0.595195 | 2.2:-34553383 | MS.gene67632:CDS |
AGTATGCATCTGCAAAGGGA+AGG | 0.595436 | 2.2:-34553384 | MS.gene67632:CDS |
TTAAATGTTGTTGTGCTGGA+AGG | 0.596826 | 2.2:-34554552 | MS.gene67632:CDS |
ACTGATGAAACTCATAGCAC+TGG | 0.598016 | 2.2:-34553737 | MS.gene67632:CDS |
CCACGAAGTAAAGGAACGCG+AGG | 0.601347 | 2.2:-34554478 | MS.gene67632:CDS |
ACCTGTCACCCAGTTTAGCA+TGG | 0.606805 | 2.2:+34555349 | None:intergenic |
GCATGCCAAGACATGTGTGT+TGG | 0.606902 | 2.2:-34553783 | MS.gene67632:CDS |
AAGACGCAGGAAATCTTCTA+CGG | 0.608096 | 2.2:+34553994 | None:intergenic |
TAATGTCAAGTGCTCAGGCA+AGG | 0.608603 | 2.2:-34552981 | MS.gene67632:CDS |
GACGGGATTCGAGTGCGTGA+GGG | 0.611142 | 2.2:-34554309 | MS.gene67632:CDS |
ATCCAGTTCGGATTATCAGA+TGG | 0.612546 | 2.2:-34553305 | MS.gene67632:CDS |
GAGATTGGATCGGATAGCAA+AGG | 0.612915 | 2.2:-34554059 | MS.gene67632:CDS |
CACGAAGTAAAGGAACGCGA+GGG | 0.614261 | 2.2:-34554477 | MS.gene67632:CDS |
AAATTGGACCATGCTAAACT+GGG | 0.615323 | 2.2:-34555357 | MS.gene67632:CDS |
TCTAGGCAGAGAAACGGACA+AGG | 0.618669 | 2.2:-34553184 | MS.gene67632:CDS |
TGGAATGTCAAACAGAATGT+GGG | 0.623286 | 2.2:-34553819 | MS.gene67632:CDS |
AGGAGTTCGCAAATGTTGGA+GGG | 0.625466 | 2.2:-34553127 | MS.gene67632:CDS |
TTCCCTCCTGTGAATAAGTG+AGG | 0.629123 | 2.2:+34554669 | None:intergenic |
CCACCTCACTTATTCACAGG+AGG | 0.635060 | 2.2:-34554672 | MS.gene67632:CDS |
AACAACATATATGAGCTAAG+AGG | 0.636409 | 2.2:-34553704 | MS.gene67632:CDS |
TTCTTAATTTCTGAGGCTCG+CGG | 0.636986 | 2.2:+34553966 | None:intergenic |
CGCCAAGAATAGAAGCACCA+GGG | 0.641290 | 2.2:-34554731 | MS.gene67632:CDS |
GCCAAGAATAGAAGCACCAG+GGG | 0.641379 | 2.2:-34554730 | MS.gene67632:CDS |
ACTTCATCATGCAAAGCAGG+TGG | 0.646109 | 2.2:+34554085 | None:intergenic |
CACCTCACTTATTCACAGGA+GGG | 0.647323 | 2.2:-34554671 | MS.gene67632:CDS |
TTGCAATACCTAGCTAAACC+AGG | 0.652461 | 2.2:+34555953 | None:intergenic |
AATTGTGGAAGCATTGAAGG+TGG | 0.654590 | 2.2:-34555673 | MS.gene67632:CDS |
TTGGATCGGATAGCAAAGGA+TGG | 0.661274 | 2.2:-34554055 | MS.gene67632:CDS |
CCTCCTGTGAATAAGTGAGG+TGG | 0.664327 | 2.2:+34554672 | None:intergenic |
CTGAACGAATGATACATCTG+AGG | 0.671246 | 2.2:+34553010 | None:intergenic |
TTGGATCCAACAAGACAACA+TGG | 0.676027 | 2.2:+34554619 | None:intergenic |
ACGAAGTAAAGGAACGCGAG+GGG | 0.682799 | 2.2:-34554476 | MS.gene67632:CDS |
GCTCGCGGACAAGAAGACGC+AGG | 0.691441 | 2.2:+34553981 | None:intergenic |
GATGTATCATTCGTTCAGCG+AGG | 0.717492 | 2.2:-34553005 | MS.gene67632:CDS |
CATCACAAATAGCATTACCA+GGG | 0.720514 | 2.2:-34553276 | MS.gene67632:CDS |
CAGAATGTGGGAGAACACTG+TGG | 0.727384 | 2.2:-34553807 | MS.gene67632:CDS |
CTAGGCAGAGAAACGGACAA+GGG | 0.731036 | 2.2:-34553183 | MS.gene67632:CDS |
TGGAGGGTGATGATATGCAG+AGG | 0.746794 | 2.2:-34553111 | MS.gene67632:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATAGAATCTCATATAA+TGG | - | chr2.2:34553125-34553144 | MS.gene67632:CDS | 15.0% |
!!! | AATTACTATTTATTTTCGAT+AGG | + | chr2.2:34553800-34553819 | None:intergenic | 15.0% |
!!! | TCTATACTATTTTAATTTAG+TGG | - | chr2.2:34553025-34553044 | MS.gene67632:CDS | 15.0% |
!! | AATAGTAATTGATATCTGTT+AGG | - | chr2.2:34553810-34553829 | MS.gene67632:CDS | 20.0% |
!! | TTAACGTTATGATGTAAATT+AGG | - | chr2.2:34553743-34553762 | MS.gene67632:CDS | 20.0% |
!! | TTACTTAAGACTATTAATGA+AGG | - | chr2.2:34555853-34555872 | MS.gene67632:intron | 20.0% |
!!! | CAACAATTTTTTCAATATGA+AGG | - | chr2.2:34554775-34554794 | MS.gene67632:intron | 20.0% |
! | ATATAGTAGAGTAAGAACAA+AGG | - | chr2.2:34554752-34554771 | MS.gene67632:intron | 25.0% |
! | ATTCTTTGACTAATTCCAAA+AGG | - | chr2.2:34555479-34555498 | MS.gene67632:intron | 25.0% |
! | ATTGGAGGTAATTATTATCA+TGG | - | chr2.2:34555727-34555746 | MS.gene67632:intron | 25.0% |
! | CTTTCTACTTATATGTAATG+TGG | - | chr2.2:34553059-34553078 | MS.gene67632:CDS | 25.0% |
! | TAAGAAATGTTCATCTAAGT+TGG | - | chr2.2:34553101-34553120 | MS.gene67632:CDS | 25.0% |
! | TAATAATTACCTCCAATTTC+AGG | + | chr2.2:34555724-34555743 | None:intergenic | 25.0% |
! | TCCTTCGAAAAAAATATGAT+TGG | + | chr2.2:34555051-34555070 | None:intergenic | 25.0% |
! | TGCTTGAATATTTCACAAAA+AGG | - | chr2.2:34553427-34553446 | MS.gene67632:CDS | 25.0% |
! | TTAAACTGCTAACACAATAA+AGG | + | chr2.2:34553360-34553379 | None:intergenic | 25.0% |
! | TTCTTTGACTAATTCCAAAA+GGG | - | chr2.2:34555480-34555499 | MS.gene67632:intron | 25.0% |
! | TTGTGAAATATTCAAGCAAA+GGG | + | chr2.2:34553425-34553444 | None:intergenic | 25.0% |
! | TTTCTCAACTTTATTGTTCT+TGG | + | chr2.2:34552893-34552912 | None:intergenic | 25.0% |
! | TTTGTGAAATATTCAAGCAA+AGG | + | chr2.2:34553426-34553445 | None:intergenic | 25.0% |
!! | ATTAATGAAGGAGCTAATTT+TGG | - | chr2.2:34555865-34555884 | MS.gene67632:intron | 25.0% |
!! | ATTCTGAAAATCTTCATTAC+TGG | - | chr2.2:34553636-34553655 | MS.gene67632:intron | 25.0% |
!! | GAAAAAGGCATATGATAATT+GGG | - | chr2.2:34555423-34555442 | MS.gene67632:intron | 25.0% |
!! | TGAAAAAGGCATATGATAAT+TGG | - | chr2.2:34555422-34555441 | MS.gene67632:intron | 25.0% |
!! | TTAACTAGTTCTTCAGTTAA+TGG | - | chr2.2:34553510-34553529 | MS.gene67632:CDS | 25.0% |
!!! | TCCAATCATATTTTTTTCGA+AGG | - | chr2.2:34555047-34555066 | MS.gene67632:intron | 25.0% |
!!! | TGGAATCTGTAGTTTTTTTT+AGG | + | chr2.2:34553896-34553915 | None:intergenic | 25.0% |
!!! | TTGCAAATGTTGATTTTGTT+CGG | + | chr2.2:34555599-34555618 | None:intergenic | 25.0% |
AACAACATATATGAGCTAAG+AGG | - | chr2.2:34555237-34555256 | MS.gene67632:intron | 30.0% | |
ACCATGAATTACAATATGTC+AGG | - | chr2.2:34555688-34555707 | MS.gene67632:intron | 30.0% | |
ATACTCACGTATATAAGTTG+CGG | + | chr2.2:34554126-34554145 | None:intergenic | 30.0% | |
ATCACTCACTTCAAATCAAA+AGG | - | chr2.2:34555293-34555312 | MS.gene67632:intron | 30.0% | |
CAACTAAAATGTATCAGAGA+CGG | + | chr2.2:34554176-34554195 | None:intergenic | 30.0% | |
CGTTATGATGTAAATTAGGA+TGG | - | chr2.2:34553747-34553766 | MS.gene67632:CDS | 30.0% | |
CTTACACTTCTTAATTTCTG+AGG | + | chr2.2:34554985-34555004 | None:intergenic | 30.0% | |
GATAATAATCCTGAAATTGG+AGG | - | chr2.2:34555712-34555731 | MS.gene67632:intron | 30.0% | |
GGAATCTTGTATATAAGTCA+AGG | - | chr2.2:34553146-34553165 | MS.gene67632:CDS | 30.0% | |
GGAGATAATAATCCTGAAAT+TGG | - | chr2.2:34555709-34555728 | MS.gene67632:intron | 30.0% | |
GGTTATCAAATCAAAGAACA+TGG | - | chr2.2:34553448-34553467 | MS.gene67632:CDS | 30.0% | |
GTAATTATTATCATGGAGAC+TGG | - | chr2.2:34555734-34555753 | MS.gene67632:intron | 30.0% | |
TATATAAGTCAAGGTAGCAT+TGG | - | chr2.2:34553155-34553174 | MS.gene67632:CDS | 30.0% | |
TCAATATGAAGGCTATATTG+AGG | - | chr2.2:34554786-34554805 | MS.gene67632:intron | 30.0% | |
TCAGAATTCTAATCTGACTA+GGG | + | chr2.2:34553623-34553642 | None:intergenic | 30.0% | |
TCCTGACATATTGTAATTCA+TGG | + | chr2.2:34555692-34555711 | None:intergenic | 30.0% | |
TCTTTGACTAATTCCAAAAG+GGG | - | chr2.2:34555481-34555500 | MS.gene67632:intron | 30.0% | |
TTAAGCTTAAAGCAGCTTTA+AGG | - | chr2.2:34555998-34556017 | MS.gene67632:CDS | 30.0% | |
TTCAGAATTCTAATCTGACT+AGG | + | chr2.2:34553624-34553643 | None:intergenic | 30.0% | |
! | AGATTTGCAAGTTAGTCTAA+AGG | - | chr2.2:34554508-34554527 | MS.gene67632:CDS | 30.0% |
! | CGGAGATAATGCTTTTATAA+TGG | + | chr2.2:34554106-34554125 | None:intergenic | 30.0% |
! | GTGATTCTAAAGAAAAGAAC+TGG | + | chr2.2:34555278-34555297 | None:intergenic | 30.0% |
! | TTATGATGATGTAGCTAATG+AGG | - | chr2.2:34552918-34552937 | MS.gene67632:CDS | 30.0% |
!! | AAAGTTTAGACTTGGTGTTA+AGG | - | chr2.2:34554592-34554611 | MS.gene67632:CDS | 30.0% |
!! | ATGAGGAAATTGATGATGAT+TGG | - | chr2.2:34554420-34554439 | MS.gene67632:CDS | 30.0% |
!! | TTTGCTGTTAAAGATCATAG+AGG | - | chr2.2:34554668-34554687 | MS.gene67632:CDS | 30.0% |
AAATTGGACCATGCTAAACT+GGG | - | chr2.2:34553584-34553603 | MS.gene67632:intron | 35.0% | |
AAGTACCTGTATTGAAAAGG+TGG | + | chr2.2:34555097-34555116 | None:intergenic | 35.0% | |
ACATCACAAATAGCATTACC+AGG | - | chr2.2:34555664-34555683 | MS.gene67632:CDS | 35.0% | |
ACCAAGTACCTGTATTGAAA+AGG | + | chr2.2:34555100-34555119 | None:intergenic | 35.0% | |
AGAAGCAGAAAGTTTAGACT+TGG | - | chr2.2:34554584-34554603 | MS.gene67632:CDS | 35.0% | |
AGTTTAATAGTGAACACTGC+TGG | - | chr2.2:34554699-34554718 | MS.gene67632:CDS | 35.0% | |
ATAATGCGTACATTCATCCA+CGG | + | chr2.2:34553847-34553866 | None:intergenic | 35.0% | |
ATATTGTAATTCATGGTCCC+TGG | + | chr2.2:34555685-34555704 | None:intergenic | 35.0% | |
ATGAAGTTTGGAGATTGGAT+CGG | - | chr2.2:34554872-34554891 | MS.gene67632:intron | 35.0% | |
ATGATTGGAGAAGAGTGATA+TGG | + | chr2.2:34555036-34555055 | None:intergenic | 35.0% | |
CATCACAAATAGCATTACCA+GGG | - | chr2.2:34555665-34555684 | MS.gene67632:CDS | 35.0% | |
CTCCATCATATTCTATGACT+TGG | + | chr2.2:34555450-34555469 | None:intergenic | 35.0% | |
CTTTCACTGATAATTCTAGC+TGG | - | chr2.2:34554558-34554577 | MS.gene67632:CDS | 35.0% | |
GAAGTTAAATGTTGTTGTGC+TGG | - | chr2.2:34554385-34554404 | MS.gene67632:CDS | 35.0% | |
GAATAACTACTCATCCAGTT+CGG | - | chr2.2:34555624-34555643 | MS.gene67632:CDS | 35.0% | |
GACCAAGTCATAGAATATGA+TGG | - | chr2.2:34555445-34555464 | MS.gene67632:intron | 35.0% | |
GCAAATGTACAGTGTAATTG+TGG | - | chr2.2:34553253-34553272 | MS.gene67632:CDS | 35.0% | |
GCTTCTTTGATTGAGTAAGA+TGG | + | chr2.2:34552960-34552979 | None:intergenic | 35.0% | |
GGGTCTATTATTGCATAGAA+CGG | + | chr2.2:34553405-34553424 | None:intergenic | 35.0% | |
TGGAATGTCAAACAGAATGT+GGG | - | chr2.2:34555122-34555141 | MS.gene67632:intron | 35.0% | |
TGTAGATTCCTTGGTGAAAA+AGG | - | chr2.2:34555408-34555427 | MS.gene67632:intron | 35.0% | |
TGTGTTGAAAACTTGACAGA+AGG | + | chr2.2:34553984-34554003 | None:intergenic | 35.0% | |
TTAAATGTTGTTGTGCTGGA+AGG | - | chr2.2:34554389-34554408 | MS.gene67632:CDS | 35.0% | |
! | ACCTTTTCAATACAGGTACT+TGG | - | chr2.2:34555096-34555115 | MS.gene67632:intron | 35.0% |
! | GTTTTTCATAGCAGCTAAAC+TGG | + | chr2.2:34553916-34553935 | None:intergenic | 35.0% |
! | TTGCAAGTTAGTCTAAAGGA+AGG | - | chr2.2:34554512-34554531 | MS.gene67632:CDS | 35.0% |
! | TTTAACTTCGCAACTGATTC+TGG | + | chr2.2:34554374-34554393 | None:intergenic | 35.0% |
!! | AGTTAATGGTTCTAATTCCG+TGG | - | chr2.2:34553524-34553543 | MS.gene67632:CDS | 35.0% |
!! | ATCATATGCCTTTTTCACCA+AGG | + | chr2.2:34555419-34555438 | None:intergenic | 35.0% |
!! | CTCACAATTTTTCTGAGAAG+AGG | + | chr2.2:34553326-34553345 | None:intergenic | 35.0% |
!! | GTGGCATTCTTGTTCTAAAA+TGG | + | chr2.2:34554253-34554272 | None:intergenic | 35.0% |
!! | TGTAATTGTGGAAGCATTGA+AGG | - | chr2.2:34553265-34553284 | MS.gene67632:CDS | 35.0% |
!!! | TGATACATTTTAGTTGTGCC+AGG | - | chr2.2:34554180-34554199 | MS.gene67632:intron | 35.0% |
AAGACGCAGGAAATCTTCTA+CGG | + | chr2.2:34554950-34554969 | None:intergenic | 40.0% | |
AAGGAAGGAGTAGGAACATT+AGG | - | chr2.2:34554527-34554546 | MS.gene67632:CDS | 40.0% | |
ACATTGTCGCAGAAGAACTT+CGG | - | chr2.2:34555788-34555807 | MS.gene67632:intron | 40.0% | |
ACGGGAAATGTTGTTCAAGT+TGG | - | chr2.2:34554347-34554366 | MS.gene67632:CDS | 40.0% | |
ACTGATGAAACTCATAGCAC+TGG | - | chr2.2:34555204-34555223 | MS.gene67632:intron | 40.0% | |
AGTCATCCATGTTGTCTTGT+TGG | - | chr2.2:34554316-34554335 | MS.gene67632:CDS | 40.0% | |
AGTTCGGATTATCAGATGGT+AGG | - | chr2.2:34555640-34555659 | MS.gene67632:CDS | 40.0% | |
ATCCAGTTCGGATTATCAGA+TGG | - | chr2.2:34555636-34555655 | MS.gene67632:CDS | 40.0% | |
CAAAACTACCTGGTTTAGCT+AGG | - | chr2.2:34552980-34552999 | MS.gene67632:CDS | 40.0% | |
CAAACTTCATCATGCAAAGC+AGG | + | chr2.2:34554862-34554881 | None:intergenic | 40.0% | |
CTGAACGAATGATACATCTG+AGG | + | chr2.2:34555934-34555953 | None:intergenic | 40.0% | |
CTGCTTTGCATGATGAAGTT+TGG | - | chr2.2:34554860-34554879 | MS.gene67632:intron | 40.0% | |
CTTACAGGTAAGTGAAGAAG+TGG | - | chr2.2:34553547-34553566 | MS.gene67632:intron | 40.0% | |
GAAATTGGACCATGCTAAAC+TGG | - | chr2.2:34553583-34553602 | MS.gene67632:intron | 40.0% | |
GCATGATGAAGTTTGGAGAT+TGG | - | chr2.2:34554867-34554886 | MS.gene67632:intron | 40.0% | |
GTGGAATGTCAAACAGAATG+TGG | - | chr2.2:34555121-34555140 | MS.gene67632:intron | 40.0% | |
GTTCGGATTATCAGATGGTA+GGG | - | chr2.2:34555641-34555660 | MS.gene67632:CDS | 40.0% | |
TAATGCGTACATTCATCCAC+GGG | + | chr2.2:34553846-34553865 | None:intergenic | 40.0% | |
TACCATCTGATAATCCGAAC+TGG | + | chr2.2:34555641-34555660 | None:intergenic | 40.0% | |
TCAAAGAAGCCAAAACTACC+TGG | - | chr2.2:34552970-34552989 | MS.gene67632:CDS | 40.0% | |
TCAATACAGGTACTTGGTAG+TGG | - | chr2.2:34555102-34555121 | MS.gene67632:intron | 40.0% | |
TCTCAGCAGCCTAAAATTTC+AGG | - | chr2.2:34554148-34554167 | MS.gene67632:intron | 40.0% | |
TGAACAACATTTCCCGTGTT+TGG | + | chr2.2:34554344-34554363 | None:intergenic | 40.0% | |
TGATGTAGCTAATGAGGATG+AGG | - | chr2.2:34552924-34552943 | MS.gene67632:CDS | 40.0% | |
TGCAAATCTCCAGTTAGAAG+TGG | + | chr2.2:34554497-34554516 | None:intergenic | 40.0% | |
TTGCAATACCTAGCTAAACC+AGG | + | chr2.2:34552991-34553010 | None:intergenic | 40.0% | |
TTGGAGAAGAGTGATATGGA+TGG | + | chr2.2:34555032-34555051 | None:intergenic | 40.0% | |
TTGGATCCAACAAGACAACA+TGG | + | chr2.2:34554325-34554344 | None:intergenic | 40.0% | |
! | CTAGCTAAACCAGGTAGTTT+TGG | + | chr2.2:34552982-34553001 | None:intergenic | 40.0% |
! | CTTTGAAAGCCACGAAGTAA+AGG | - | chr2.2:34554454-34554473 | MS.gene67632:CDS | 40.0% |
! | GAGACGGATCCTGAAATTTT+AGG | + | chr2.2:34554160-34554179 | None:intergenic | 40.0% |
! | GTTAGTCTAAAGGAAGGAGT+AGG | - | chr2.2:34554518-34554537 | MS.gene67632:CDS | 40.0% |
! | GTTTGCCACCTTTTCAATAC+AGG | - | chr2.2:34555089-34555108 | MS.gene67632:intron | 40.0% |
! | TGTCTTGTTGGATCCAAACA+CGG | - | chr2.2:34554328-34554347 | MS.gene67632:CDS | 40.0% |
!! | AATTGTGGAAGCATTGAAGG+TGG | - | chr2.2:34553268-34553287 | MS.gene67632:CDS | 40.0% |
!! | AGCTTAAAGCAGCTTTAAGG+TGG | - | chr2.2:34556001-34556020 | MS.gene67632:CDS | 40.0% |
!! | ATTATCATGGAGACTGGTCT+AGG | - | chr2.2:34555740-34555759 | MS.gene67632:intron | 40.0% |
!! | CTTAAAGCAGCTTTAAGGTG+GGG | - | chr2.2:34556003-34556022 | MS.gene67632:CDS | 40.0% |
!! | GCTGGAAGGTGATTTTAATG+AGG | - | chr2.2:34554403-34554422 | MS.gene67632:CDS | 40.0% |
!! | GCTTAAAGCAGCTTTAAGGT+GGG | - | chr2.2:34556002-34556021 | MS.gene67632:CDS | 40.0% |
!! | GTTTAGACTTGGTGTTAAGG+TGG | - | chr2.2:34554595-34554614 | MS.gene67632:CDS | 40.0% |
!! | TTCTTAATTTCTGAGGCTCG+CGG | + | chr2.2:34554978-34554997 | None:intergenic | 40.0% |
!!! | TACTGATTTCGATCCCCTTT+TGG | + | chr2.2:34555497-34555516 | None:intergenic | 40.0% |
ACAGAAGGACTAACGTGTCT+CGG | + | chr2.2:34553969-34553988 | None:intergenic | 45.0% | |
ACTTCATCATGCAAAGCAGG+TGG | + | chr2.2:34554859-34554878 | None:intergenic | 45.0% | |
AGGAGTTCGCAAATGTTGGA+GGG | - | chr2.2:34555814-34555833 | MS.gene67632:intron | 45.0% | |
AGTACCCAACACACATGTCT+TGG | + | chr2.2:34555166-34555185 | None:intergenic | 45.0% | |
AGTATGCATCTGCAAAGGGA+AGG | - | chr2.2:34555557-34555576 | MS.gene67632:intron | 45.0% | |
ATGCCACCTCACTTATTCAC+AGG | - | chr2.2:34554266-34554285 | MS.gene67632:intron | 45.0% | |
CACCTCACTTATTCACAGGA+GGG | - | chr2.2:34554270-34554289 | MS.gene67632:CDS | 45.0% | |
CAGCAGTATGCATCTGCAAA+GGG | - | chr2.2:34555553-34555572 | MS.gene67632:intron | 45.0% | |
CATGCCAAGACATGTGTGTT+GGG | - | chr2.2:34555159-34555178 | MS.gene67632:intron | 45.0% | |
CTAAGAGGTCTCATTGCTGA+TGG | - | chr2.2:34555252-34555271 | MS.gene67632:intron | 45.0% | |
CTTCACTTACCTGTAAGCCA+CGG | + | chr2.2:34553544-34553563 | None:intergenic | 45.0% | |
GAGATTGGATCGGATAGCAA+AGG | - | chr2.2:34554882-34554901 | MS.gene67632:intron | 45.0% | |
GAGGATAATGTCAAGTGCTC+AGG | - | chr2.2:34555955-34555974 | MS.gene67632:intron | 45.0% | |
GATGTATCATTCGTTCAGCG+AGG | - | chr2.2:34555936-34555955 | MS.gene67632:intron | 45.0% | |
GCAAAGACTCTGCTCATCTT+TGG | - | chr2.2:34553298-34553317 | MS.gene67632:CDS | 45.0% | |
GCAGATGTCTGTAGATTCCT+TGG | - | chr2.2:34555399-34555418 | MS.gene67632:intron | 45.0% | |
GCTTAGGAGTTCGCAAATGT+TGG | - | chr2.2:34555810-34555829 | MS.gene67632:intron | 45.0% | |
GTATGCATCTGCAAAGGGAA+GGG | - | chr2.2:34555558-34555577 | MS.gene67632:intron | 45.0% | |
GTTCTAATTCCGTGGCTTAC+AGG | - | chr2.2:34553532-34553551 | MS.gene67632:CDS | 45.0% | |
TAATGTCAAGTGCTCAGGCA+AGG | - | chr2.2:34555960-34555979 | MS.gene67632:intron | 45.0% | |
TAGGAGTTCGCAAATGTTGG+AGG | - | chr2.2:34555813-34555832 | MS.gene67632:intron | 45.0% | |
TCACTTATTCACAGGAGGGA+AGG | - | chr2.2:34554274-34554293 | MS.gene67632:CDS | 45.0% | |
TTCCCTCCTGTGAATAAGTG+AGG | + | chr2.2:34554275-34554294 | None:intergenic | 45.0% | |
TTGGATCGGATAGCAAAGGA+TGG | - | chr2.2:34554886-34554905 | MS.gene67632:intron | 45.0% | |
! | GTCTTGTTGGATCCAAACAC+GGG | - | chr2.2:34554329-34554348 | MS.gene67632:CDS | 45.0% |
! | GTGTTACACTGAAGAGCGTA+AGG | - | chr2.2:34554052-34554071 | MS.gene67632:CDS | 45.0% |
ACCATGCTAAACTGGGTGAC+AGG | - | chr2.2:34553591-34553610 | MS.gene67632:intron | 50.0% | |
ACCTGTCACCCAGTTTAGCA+TGG | + | chr2.2:34553595-34553614 | None:intergenic | 50.0% | |
ACGAAGTAAAGGAACGCGAG+GGG | - | chr2.2:34554465-34554484 | MS.gene67632:CDS | 50.0% | |
ACGCTCTTCAGTGTAACACG+TGG | + | chr2.2:34554051-34554070 | None:intergenic | 50.0% | |
ATTCACAGGAGGGAAGGTTG+AGG | - | chr2.2:34554280-34554299 | MS.gene67632:CDS | 50.0% | |
CACGAAGTAAAGGAACGCGA+GGG | - | chr2.2:34554464-34554483 | MS.gene67632:CDS | 50.0% | |
CAGAATGTGGGAGAACACTG+TGG | - | chr2.2:34555134-34555153 | MS.gene67632:intron | 50.0% | |
CAGATGCATACTGCTGCTCT+TGG | + | chr2.2:34555549-34555568 | None:intergenic | 50.0% | |
CCACCTCACTTATTCACAGG+AGG | - | chr2.2:34554269-34554288 | MS.gene67632:CDS | 50.0% | |
CCTCCTGTGAATAAGTGAGG+TGG | + | chr2.2:34554272-34554291 | None:intergenic | 50.0% | |
CCTGGTGCTTCTATTCTTGG+CGG | + | chr2.2:34554212-34554231 | None:intergenic | 50.0% | |
CGAATCCCGTCACAATATCC+AGG | + | chr2.2:34554623-34554642 | None:intergenic | 50.0% | |
CTAGGCAGAGAAACGGACAA+GGG | - | chr2.2:34555758-34555777 | MS.gene67632:intron | 50.0% | |
GCAGCAGTATGCATCTGCAA+AGG | - | chr2.2:34555552-34555571 | MS.gene67632:intron | 50.0% | |
GCATGCCAAGACATGTGTGT+TGG | - | chr2.2:34555158-34555177 | MS.gene67632:intron | 50.0% | |
GGGAAAAGGCCACTTCTAAC+TGG | - | chr2.2:34554485-34554504 | MS.gene67632:CDS | 50.0% | |
GTGGCTCCTGGATATTGTGA+CGG | - | chr2.2:34554614-34554633 | MS.gene67632:CDS | 50.0% | |
TAAAGGAACGCGAGGGGAAA+AGG | - | chr2.2:34554471-34554490 | MS.gene67632:CDS | 50.0% | |
TATTCTTGGCGGTGAAGACC+TGG | + | chr2.2:34554201-34554220 | None:intergenic | 50.0% | |
TCCCCTGGTGCTTCTATTCT+TGG | + | chr2.2:34554215-34554234 | None:intergenic | 50.0% | |
TCGCAGAAGAACTTCGGCTT+AGG | - | chr2.2:34555794-34555813 | MS.gene67632:intron | 50.0% | |
TCTAGGCAGAGAAACGGACA+AGG | - | chr2.2:34555757-34555776 | MS.gene67632:intron | 50.0% | |
TGAAGAAGTGGAGCGTGCTT+TGG | - | chr2.2:34553559-34553578 | MS.gene67632:intron | 50.0% | |
TGGAGGGTGATGATATGCAG+AGG | - | chr2.2:34555830-34555849 | MS.gene67632:intron | 50.0% | |
TGGCTCCTGGATATTGTGAC+GGG | - | chr2.2:34554615-34554634 | MS.gene67632:CDS | 50.0% | |
TTCACAGGAGGGAAGGTTGA+GGG | - | chr2.2:34554281-34554300 | MS.gene67632:CDS | 50.0% | |
! | AGCTGCAGATTCTTTTCCCC+TGG | + | chr2.2:34554230-34554249 | None:intergenic | 50.0% |
!! | CGCCAAGAATAGAAGCACCA+GGG | - | chr2.2:34554210-34554229 | MS.gene67632:intron | 50.0% |
!! | GACTGGTCTAGGCAGAGAAA+CGG | - | chr2.2:34555751-34555770 | MS.gene67632:intron | 50.0% |
!! | GCCAAGAATAGAAGCACCAG+GGG | - | chr2.2:34554211-34554230 | MS.gene67632:intron | 50.0% |
CCACGAAGTAAAGGAACGCG+AGG | - | chr2.2:34554463-34554482 | MS.gene67632:CDS | 55.0% | |
CCTCGCGTTCCTTTACTTCG+TGG | + | chr2.2:34554466-34554485 | None:intergenic | 55.0% | |
GCTCAGGCAAGGCTGTTGTT+GGG | - | chr2.2:34555971-34555990 | MS.gene67632:CDS | 55.0% | |
GGAGCGTGCTTTGGCGAAAT+TGG | - | chr2.2:34553568-34553587 | MS.gene67632:intron | 55.0% | |
TGCTCAGGCAAGGCTGTTGT+TGG | - | chr2.2:34555970-34555989 | MS.gene67632:CDS | 55.0% | |
!! | CCGCCAAGAATAGAAGCACC+AGG | - | chr2.2:34554209-34554228 | MS.gene67632:intron | 55.0% |
!! | CTTGGTGTTAAGGTGGCTCC+TGG | - | chr2.2:34554602-34554621 | MS.gene67632:CDS | 55.0% |
CAGGCAAGGCTGTTGTTGGG+TGG | - | chr2.2:34555974-34555993 | MS.gene67632:CDS | 60.0% | |
GACGGGATTCGAGTGCGTGA+GGG | - | chr2.2:34554632-34554651 | MS.gene67632:CDS | 60.0% | |
GGGAAGGTTGAGGGAGAGCA+AGG | - | chr2.2:34554290-34554309 | MS.gene67632:CDS | 60.0% | |
TGACGGGATTCGAGTGCGTG+AGG | - | chr2.2:34554631-34554650 | MS.gene67632:CDS | 60.0% | |
! | GTTAGGCATGATGACGCCCG+TGG | - | chr2.2:34553827-34553846 | MS.gene67632:CDS | 60.0% |
GCTCGCGGACAAGAAGACGC+AGG | + | chr2.2:34554963-34554982 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 34552880 | 34556083 | 34552880 | ID=MS.gene67632 |
chr2.2 | mRNA | 34552880 | 34556083 | 34552880 | ID=MS.gene67632.t1;Parent=MS.gene67632 |
chr2.2 | exon | 34555962 | 34556083 | 34555962 | ID=MS.gene67632.t1.exon1;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34555962 | 34556083 | 34555962 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34555623 | 34555698 | 34555623 | ID=MS.gene67632.t1.exon2;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34555623 | 34555698 | 34555623 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34555351 | 34555409 | 34555351 | ID=MS.gene67632.t1.exon3;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34555351 | 34555409 | 34555351 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34554268 | 34554761 | 34554268 | ID=MS.gene67632.t1.exon4;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34554268 | 34554761 | 34554268 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34553964 | 34554124 | 34553964 | ID=MS.gene67632.t1.exon5;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34553964 | 34554124 | 34553964 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34553649 | 34553852 | 34553649 | ID=MS.gene67632.t1.exon6;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34553649 | 34553852 | 34553649 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
chr2.2 | exon | 34552880 | 34553560 | 34552880 | ID=MS.gene67632.t1.exon7;Parent=MS.gene67632.t1 |
chr2.2 | CDS | 34552880 | 34553560 | 34552880 | ID=cds.MS.gene67632.t1;Parent=MS.gene67632.t1 |
Gene Sequence |
Protein sequence |