Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90557.t1 | XP_013463825.1 | 98.2 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.00E+00 | 1162.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90557.t1 | F4IPM3 | 61.6 | 614 | 197 | 10 | 9 | 598 | 1 | 599 | 2.2e-201 | 703.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90557.t1 | A0A072VIC7 | 98.2 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.0e+00 | 1162.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050903 | MS.gene90557 | 0.819478 | 1.14E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90557 | MS.gene68707 | PPI |
| MS.gene67632 | MS.gene90557 | PPI |
| MS.gene90557 | MS.gene036365 | PPI |
| MS.gene036365 | MS.gene90557 | PPI |
| MS.gene90557 | MS.gene67632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90557.t1 | MTR_2g450080 | 98.161 | 598 | 6 | 1 | 1 | 598 | 1 | 593 | 0.0 | 1216 |
| MS.gene90557.t1 | MTR_4g090970 | 54.127 | 630 | 236 | 11 | 8 | 598 | 12 | 627 | 0.0 | 631 |
| MS.gene90557.t1 | MTR_2g011810 | 53.689 | 637 | 246 | 10 | 1 | 598 | 6 | 632 | 0.0 | 623 |
| MS.gene90557.t1 | MTR_4g128600 | 53.181 | 613 | 232 | 8 | 35 | 598 | 29 | 635 | 0.0 | 618 |
| MS.gene90557.t1 | MTR_8g104510 | 45.269 | 391 | 205 | 7 | 11 | 398 | 4 | 388 | 6.03e-107 | 330 |
| MS.gene90557.t1 | MTR_6g083730 | 40.940 | 447 | 244 | 7 | 11 | 443 | 4 | 444 | 4.58e-105 | 326 |
| MS.gene90557.t1 | MTR_8g104490 | 41.099 | 455 | 244 | 10 | 11 | 459 | 4 | 440 | 1.82e-104 | 324 |
| MS.gene90557.t1 | MTR_4g106810 | 46.556 | 363 | 189 | 4 | 26 | 387 | 10 | 368 | 7.03e-102 | 320 |
| MS.gene90557.t1 | MTR_8g104490 | 41.644 | 365 | 193 | 6 | 100 | 460 | 28 | 376 | 6.22e-91 | 287 |
| MS.gene90557.t1 | MTR_6g083320 | 45.608 | 296 | 157 | 3 | 11 | 303 | 4 | 298 | 9.30e-83 | 266 |
| MS.gene90557.t1 | MTR_7g112000 | 36.066 | 366 | 204 | 11 | 49 | 401 | 31 | 379 | 6.33e-58 | 203 |
| MS.gene90557.t1 | MTR_7g111980 | 28.645 | 583 | 322 | 20 | 51 | 598 | 51 | 574 | 2.43e-46 | 172 |
| MS.gene90557.t1 | MTR_7g111980 | 28.810 | 538 | 296 | 19 | 96 | 598 | 6 | 491 | 2.96e-44 | 164 |
| MS.gene90557.t1 | MTR_7g111960 | 33.233 | 331 | 212 | 6 | 59 | 385 | 60 | 385 | 4.34e-44 | 166 |
| MS.gene90557.t1 | MTR_6g083810 | 35.878 | 131 | 81 | 2 | 11 | 139 | 4 | 133 | 3.16e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90557.t1 | AT2G24300 | 60.828 | 628 | 191 | 11 | 1 | 598 | 1 | 603 | 0.0 | 729 |
| MS.gene90557.t1 | AT2G24300 | 60.968 | 620 | 191 | 10 | 9 | 598 | 1 | 599 | 0.0 | 728 |
| MS.gene90557.t1 | AT4G31000 | 59.766 | 599 | 203 | 8 | 1 | 598 | 1 | 562 | 0.0 | 692 |
| MS.gene90557.t1 | AT2G24300 | 60.854 | 562 | 173 | 8 | 67 | 598 | 8 | 552 | 0.0 | 663 |
| MS.gene90557.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
| MS.gene90557.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
| MS.gene90557.t1 | AT2G18750 | 54.305 | 604 | 246 | 10 | 21 | 598 | 19 | 618 | 0.0 | 606 |
| MS.gene90557.t1 | AT5G57580 | 50.840 | 655 | 244 | 13 | 1 | 595 | 1 | 637 | 0.0 | 604 |
| MS.gene90557.t1 | AT4G25800 | 54.915 | 590 | 230 | 10 | 35 | 598 | 16 | 595 | 0.0 | 598 |
| MS.gene90557.t1 | AT4G25800 | 54.915 | 590 | 230 | 10 | 35 | 598 | 16 | 595 | 0.0 | 598 |
| MS.gene90557.t1 | AT4G31000 | 53.654 | 602 | 214 | 10 | 1 | 598 | 1 | 541 | 0.0 | 597 |
| MS.gene90557.t1 | AT5G62570 | 44.180 | 378 | 198 | 9 | 41 | 412 | 13 | 383 | 4.88e-99 | 310 |
| MS.gene90557.t1 | AT5G62570 | 43.947 | 380 | 200 | 9 | 39 | 412 | 26 | 398 | 7.68e-99 | 310 |
| MS.gene90557.t1 | AT5G62570 | 45.349 | 344 | 177 | 8 | 39 | 378 | 26 | 362 | 1.65e-94 | 295 |
| MS.gene90557.t1 | AT1G73805 | 40.127 | 471 | 243 | 14 | 11 | 475 | 4 | 441 | 1.17e-90 | 287 |
| MS.gene90557.t1 | AT5G62570 | 47.778 | 270 | 131 | 7 | 39 | 305 | 26 | 288 | 1.24e-74 | 240 |
| MS.gene90557.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 42 | 389 | 28 | 363 | 5.97e-74 | 243 |
| MS.gene90557.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 42 | 389 | 28 | 363 | 8.30e-73 | 244 |
| MS.gene90557.t1 | AT5G26920 | 38.920 | 352 | 187 | 10 | 42 | 389 | 28 | 355 | 1.44e-70 | 238 |
Find 144 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCAACTTTATTGTTCT+TGG | 0.176255 | 2.1:+41196063 | None:intergenic |
| AAAATTAGCTCCTTCATTAA+TGG | 0.231011 | 2.1:+41193097 | None:intergenic |
| TAATAATTACCTCCAATTTC+AGG | 0.231327 | 2.1:+41193239 | None:intergenic |
| GTGGCATTCTTGTTCTAAAA+TGG | 0.234537 | 2.1:+41194714 | None:intergenic |
| TTAAGCTTAAAGCAGCTTTA+AGG | 0.234780 | 2.1:-41192962 | MS.gene90557:CDS |
| CTAGCTAAACCAGGTAGTTT+TGG | 0.249092 | 2.1:+41195974 | None:intergenic |
| ATTAATGAAGGAGCTAATTT+TGG | 0.250528 | 2.1:-41193095 | MS.gene90557:CDS |
| TTTAACTTCGCAACTGATTC+TGG | 0.253100 | 2.1:+41194593 | None:intergenic |
| GAAATTAGACCATGCTAAAC+TGG | 0.287354 | 2.1:-41195370 | MS.gene90557:CDS |
| CTGCTTTGCATGATGAAGTT+TGG | 0.307314 | 2.1:-41194103 | MS.gene90557:CDS |
| TGTAGATTCCTTGGTGAAAA+AGG | 0.308211 | 2.1:-41193552 | MS.gene90557:CDS |
| TGAACAACGTTTCCCGTGTT+TGG | 0.311391 | 2.1:+41194623 | None:intergenic |
| GGTGATAATAATCCTGAAAT+TGG | 0.329346 | 2.1:-41193251 | MS.gene90557:CDS |
| GCAAAGACTCTGCTCATCTT+TGG | 0.340248 | 2.1:-41195655 | MS.gene90557:CDS |
| ACCTGACATGTTGTAATTCA+TGG | 0.356669 | 2.1:+41193271 | None:intergenic |
| ATGAGGAAATTGATGATGAT+TGG | 0.358972 | 2.1:-41194544 | MS.gene90557:CDS |
| GGGAAAAGGCCACTTCTAAC+TGG | 0.383127 | 2.1:-41194479 | MS.gene90557:CDS |
| AAGGAAGGAGTAGGAACATT+AGG | 0.389807 | 2.1:-41194437 | MS.gene90557:CDS |
| GCATGATGAAGTTTGGAGAT+TGG | 0.410980 | 2.1:-41194096 | MS.gene90557:CDS |
| CCCGGTGCTTCTATTCTTGG+CGG | 0.415229 | 2.1:+41194755 | None:intergenic |
| CCTCGCGTTCCTTTACTTCG+TGG | 0.416281 | 2.1:+41194501 | None:intergenic |
| TTCTTTGACTAATTCCAAAA+GGG | 0.417389 | 2.1:-41193480 | MS.gene90557:CDS |
| CAGATGCATACTGCTGCTCT+TGG | 0.421224 | 2.1:+41193414 | None:intergenic |
| TAAAGGAACGCGAGGGGAAA+AGG | 0.424802 | 2.1:-41194493 | MS.gene90557:CDS |
| ATTGGAGGTAATTATTATCA+TGG | 0.428342 | 2.1:-41193233 | MS.gene90557:CDS |
| TGAAGAAGTGGAGCGTGCTT+TGG | 0.431106 | 2.1:-41195394 | MS.gene90557:CDS |
| GCTTAGGAGTTCACAAATGT+TGG | 0.433634 | 2.1:-41193150 | MS.gene90557:CDS |
| TGCTCAGGGAAGGCTGTTGT+TGG | 0.436709 | 2.1:-41192990 | MS.gene90557:CDS |
| ATTCTTTGACTAATTCCAAA+AGG | 0.441002 | 2.1:-41193481 | MS.gene90557:CDS |
| GTGATTCTAAAGAGAAGAAC+TGG | 0.444162 | 2.1:+41193689 | None:intergenic |
| TCGCAGAAGAACTTCGGCTT+AGG | 0.447943 | 2.1:-41193166 | MS.gene90557:CDS |
| ATCACTCACTTCAAATCAAA+AGG | 0.454320 | 2.1:-41193671 | MS.gene90557:intron |
| AGTCATCCATGTTGTCTTGT+TGG | 0.456149 | 2.1:-41194648 | MS.gene90557:CDS |
| AAAGTTTAGACTTGGTGTTA+AGG | 0.456288 | 2.1:-41194372 | MS.gene90557:CDS |
| ACAGATGTCTGTAGATTCCT+TGG | 0.459013 | 2.1:-41193561 | MS.gene90557:intron |
| GAGGATAATGTCAAGTGCTC+AGG | 0.464901 | 2.1:-41193005 | MS.gene90557:CDS |
| CATGCCAAGACATGTGTCTT+GGG | 0.465729 | 2.1:-41193805 | MS.gene90557:CDS |
| TACCATCTGATAATCCGAAC+TGG | 0.468563 | 2.1:+41193322 | None:intergenic |
| CTTGGTGTTAAGGTGGCTCC+TGG | 0.469576 | 2.1:-41194362 | MS.gene90557:CDS |
| TCAATACAGGTACTTGGTAG+TGG | 0.472613 | 2.1:-41193862 | MS.gene90557:intron |
| CTCCATCATATTCTATGACT+TGG | 0.480405 | 2.1:+41193513 | None:intergenic |
| ATTATCATGGAGACTGGTCT+AGG | 0.480685 | 2.1:-41193220 | MS.gene90557:CDS |
| TTCACAGGAGGGAAGGTTGA+GGG | 0.486109 | 2.1:-41194683 | MS.gene90557:CDS |
| CTTTCACTGATAATTCTAGC+TGG | 0.486782 | 2.1:-41194406 | MS.gene90557:CDS |
| GCTTCTTTGATTGAGTAAGA+TGG | 0.488191 | 2.1:+41195996 | None:intergenic |
| CTTTGAAAGCCACGAAGTAA+AGG | 0.491383 | 2.1:-41194510 | MS.gene90557:CDS |
| GCTCAGGGAAGGCTGTTGTT+GGG | 0.493371 | 2.1:-41192989 | MS.gene90557:CDS |
| GGGAAGGTTGAGGGAGAGCA+AGG | 0.502361 | 2.1:-41194674 | MS.gene90557:CDS |
| AGCTTAAAGCAGCTTTAAGG+TGG | 0.507495 | 2.1:-41192959 | MS.gene90557:CDS |
| CTTACGCTTCTTAATTTCTG+TGG | 0.514530 | 2.1:+41193981 | None:intergenic |
| ACCATGCTAAACTGGGTGAC+AGG | 0.518344 | 2.1:-41195362 | MS.gene90557:intron |
| CAAAACTACCTGGTTTAGCT+AGG | 0.519085 | 2.1:-41195973 | MS.gene90557:intron |
| CGAATCCCGTCACAATATCC+AGG | 0.519800 | 2.1:+41194344 | None:intergenic |
| TGTAATTGTGGAAGCATTGA+AGG | 0.522949 | 2.1:-41195688 | MS.gene90557:CDS |
| TTACTTAAGACCATTAATGA+AGG | 0.525303 | 2.1:-41193107 | MS.gene90557:CDS |
| CAAACTTCATCATGCAAAGC+AGG | 0.525398 | 2.1:+41194104 | None:intergenic |
| CAGGGAAGGCTGTTGTTGGG+TGG | 0.525617 | 2.1:-41192986 | MS.gene90557:CDS |
| GTAATTATTATCATGGAGAC+TGG | 0.529490 | 2.1:-41193226 | MS.gene90557:CDS |
| GCAGAGAAACGGACAAGGGT+TGG | 0.529494 | 2.1:-41193198 | MS.gene90557:CDS |
| ATTCACAGGAGGGAAGGTTG+AGG | 0.534510 | 2.1:-41194684 | MS.gene90557:CDS |
| ACCATGAATTACAACATGTC+AGG | 0.536123 | 2.1:-41193272 | MS.gene90557:CDS |
| TAGGAGTTCACAAATGTTGG+AGG | 0.537110 | 2.1:-41193147 | MS.gene90557:CDS |
| CAGCAGTATGCATCTGCAAA+GGG | 0.538227 | 2.1:-41193407 | MS.gene90557:CDS |
| ACGGGAAACGTTGTTCAAGT+TGG | 0.538321 | 2.1:-41194617 | MS.gene90557:CDS |
| AGATTTGCAAGTTAGTCTAA+AGG | 0.541446 | 2.1:-41194456 | MS.gene90557:CDS |
| ACCGCCAAGAATAGAAGCAC+CGG | 0.541459 | 2.1:-41194756 | MS.gene90557:CDS |
| TCTATGATCTTTAACAGCAA+AGG | 0.544423 | 2.1:+41194298 | None:intergenic |
| GACTGGTCTAGGCAGAGAAA+CGG | 0.545642 | 2.1:-41193209 | MS.gene90557:CDS |
| TTCTTAATTTCTGTGGCTCG+CGG | 0.547261 | 2.1:+41193988 | None:intergenic |
| CTTAAAGCAGCTTTAAGGTG+GGG | 0.549551 | 2.1:-41192957 | MS.gene90557:CDS |
| GATAATAATCCTGAAATTGG+AGG | 0.549659 | 2.1:-41193248 | MS.gene90557:CDS |
| TTAAAGCAGCTTTAAGGTGG+GGG | 0.550542 | 2.1:-41192956 | MS.gene90557:CDS |
| AGTTCGGATTATCAGATGGT+AGG | 0.552487 | 2.1:-41193320 | MS.gene90557:CDS |
| TGGCTCCTGGATATTGTGAC+GGG | 0.555314 | 2.1:-41194349 | MS.gene90557:CDS |
| GCATGCCAAGACATGTGTCT+TGG | 0.555550 | 2.1:-41193806 | MS.gene90557:CDS |
| GACCAAGTCATAGAATATGA+TGG | 0.555949 | 2.1:-41193515 | MS.gene90557:CDS |
| GCTTAAAGCAGCTTTAAGGT+GGG | 0.558727 | 2.1:-41192958 | MS.gene90557:CDS |
| CTAAGAGGTCTCATTGCTGA+TGG | 0.560083 | 2.1:-41193712 | MS.gene90557:CDS |
| GTTCGGATTATCAGATGGTA+GGG | 0.561192 | 2.1:-41193319 | MS.gene90557:CDS |
| CCGCCAAGAATAGAAGCACC+GGG | 0.561488 | 2.1:-41194755 | MS.gene90557:CDS |
| AGAAGCAGAAAGTTTAGACT+TGG | 0.563077 | 2.1:-41194380 | MS.gene90557:CDS |
| GAAGTTAAATGTTGTTGTGC+TGG | 0.563996 | 2.1:-41194579 | MS.gene90557:CDS |
| ATGAAGTTTGGAGATTGGAT+CGG | 0.564012 | 2.1:-41194091 | MS.gene90557:CDS |
| ACATTGTCGCAGAAGAACTT+CGG | 0.565117 | 2.1:-41193172 | MS.gene90557:CDS |
| TGTCTTGTTGGATCCAAACA+CGG | 0.566446 | 2.1:-41194636 | MS.gene90557:CDS |
| ACATCACAAATAGCATTACC+AGG | 0.566533 | 2.1:-41193296 | MS.gene90557:CDS |
| GAATAACTACTCATCCAGTT+CGG | 0.566553 | 2.1:-41193336 | MS.gene90557:CDS |
| GTTTAGACTTGGTGTTAAGG+TGG | 0.566982 | 2.1:-41194369 | MS.gene90557:CDS |
| GTTAGTCTAAAGGAAGGAGT+AGG | 0.569301 | 2.1:-41194446 | MS.gene90557:CDS |
| TTGCAAGTTAGTCTAAAGGA+AGG | 0.570603 | 2.1:-41194452 | MS.gene90557:CDS |
| TCAAAGAAGCCAAAACTACC+TGG | 0.573508 | 2.1:-41195983 | MS.gene90557:CDS |
| TCACTTATTCACAGGAGGGA+AGG | 0.579079 | 2.1:-41194690 | MS.gene90557:CDS |
| AGGATAATGTCAAGTGCTCA+GGG | 0.579753 | 2.1:-41193004 | MS.gene90557:CDS |
| AGTACCCAAGACACATGTCT+TGG | 0.579782 | 2.1:+41193801 | None:intergenic |
| TGCAAATCTCCAGTTAGAAG+TGG | 0.579936 | 2.1:+41194470 | None:intergenic |
| TGACGGGATTCGAGTGCGTG+AGG | 0.580615 | 2.1:-41194333 | MS.gene90557:CDS |
| GTGGAATGTCAAACAGAATG+TGG | 0.581489 | 2.1:-41193843 | MS.gene90557:CDS |
| ATGCCACCTCACTTATTCAC+AGG | 0.582197 | 2.1:-41194698 | MS.gene90557:CDS |
| GTCTTGTTGGATCCAAACAC+GGG | 0.582870 | 2.1:-41194635 | MS.gene90557:CDS |
| GCAGCAGTATGCATCTGCAA+AGG | 0.584416 | 2.1:-41193408 | MS.gene90557:CDS |
| TTTGCTGTTAAAGATCATAG+AGG | 0.584829 | 2.1:-41194296 | MS.gene90557:CDS |
| GCAAATGTACAGTGTAATTG+TGG | 0.585229 | 2.1:-41195700 | MS.gene90557:intron |
| TCTTTGACTAATTCCAAAAG+GGG | 0.586778 | 2.1:-41193479 | MS.gene90557:CDS |
| CTTACAGGTCAGTGAAGAAG+TGG | 0.588186 | 2.1:-41195406 | MS.gene90557:intron |
| TTATGATGATGTAGCTAATG+AGG | 0.592406 | 2.1:-41196035 | MS.gene90557:CDS |
| TGATGTAGCTAATGAGGATG+AGG | 0.592955 | 2.1:-41196029 | MS.gene90557:CDS |
| GTGGCTCCTGGATATTGTGA+CGG | 0.594325 | 2.1:-41194350 | MS.gene90557:CDS |
| GTATGCATCTGCAAAGGGAA+GGG | 0.595195 | 2.1:-41193402 | MS.gene90557:CDS |
| AGTATGCATCTGCAAAGGGA+AGG | 0.595436 | 2.1:-41193403 | MS.gene90557:CDS |
| TTAAATGTTGTTGTGCTGGA+AGG | 0.596826 | 2.1:-41194575 | MS.gene90557:CDS |
| ACTGATGAAACTCATAGCAC+TGG | 0.598016 | 2.1:-41193760 | MS.gene90557:CDS |
| AAATTAGACCATGCTAAACT+GGG | 0.600527 | 2.1:-41195369 | MS.gene90557:CDS |
| CCACGAAGTAAAGGAACGCG+AGG | 0.601347 | 2.1:-41194501 | MS.gene90557:CDS |
| ACCTGTCACCCAGTTTAGCA+TGG | 0.604323 | 2.1:+41195361 | None:intergenic |
| AAGACGCAGGAAATCTTCTA+CGG | 0.608096 | 2.1:+41194016 | None:intergenic |
| TAATGTCAAGTGCTCAGGGA+AGG | 0.608603 | 2.1:-41193000 | MS.gene90557:CDS |
| GACGGGATTCGAGTGCGTGA+GGG | 0.611142 | 2.1:-41194332 | MS.gene90557:CDS |
| ATCCAGTTCGGATTATCAGA+TGG | 0.612546 | 2.1:-41193324 | MS.gene90557:CDS |
| GAGATTGGATCGGATAGCAA+AGG | 0.612915 | 2.1:-41194081 | MS.gene90557:CDS |
| CACGAAGTAAAGGAACGCGA+GGG | 0.614261 | 2.1:-41194500 | MS.gene90557:CDS |
| ATGTTGTAATTCATGGTCCC+TGG | 0.617403 | 2.1:+41193278 | None:intergenic |
| TCTAGGCAGAGAAACGGACA+AGG | 0.618669 | 2.1:-41193203 | MS.gene90557:CDS |
| TGGAATGTCAAACAGAATGT+GGG | 0.623286 | 2.1:-41193842 | MS.gene90557:CDS |
| AGGAGTTCACAAATGTTGGA+GGG | 0.628136 | 2.1:-41193146 | MS.gene90557:CDS |
| TTCCCTCCTGTGAATAAGTG+AGG | 0.629123 | 2.1:+41194692 | None:intergenic |
| CCACCTCACTTATTCACAGG+AGG | 0.635060 | 2.1:-41194695 | MS.gene90557:CDS |
| AACAACATATATGAGCTAAG+AGG | 0.636409 | 2.1:-41193727 | MS.gene90557:CDS |
| GCCAAGAATAGAAGCACCGG+GGG | 0.641165 | 2.1:-41194753 | MS.gene90557:CDS |
| ACTTCATCATGCAAAGCAGG+TGG | 0.646109 | 2.1:+41194107 | None:intergenic |
| CACCTCACTTATTCACAGGA+GGG | 0.647323 | 2.1:-41194694 | MS.gene90557:CDS |
| TTGCAATACCTAGCTAAACC+AGG | 0.652461 | 2.1:+41195965 | None:intergenic |
| AATTGTGGAAGCATTGAAGG+TGG | 0.654590 | 2.1:-41195685 | MS.gene90557:CDS |
| TTGGATCGGATAGCAAAGGA+TGG | 0.661274 | 2.1:-41194077 | MS.gene90557:CDS |
| CCTCCTGTGAATAAGTGAGG+TGG | 0.664327 | 2.1:+41194695 | None:intergenic |
| CTGAACGAATGATACATCTG+AGG | 0.671246 | 2.1:+41193029 | None:intergenic |
| TTGGATCCAACAAGACAACA+TGG | 0.676027 | 2.1:+41194642 | None:intergenic |
| ACGAAGTAAAGGAACGCGAG+GGG | 0.682799 | 2.1:-41194499 | MS.gene90557:CDS |
| GCTCGCGGACAAGAAGACGC+AGG | 0.689588 | 2.1:+41194003 | None:intergenic |
| TGGAGGGTGATGATATGCAA+AGG | 0.705439 | 2.1:-41193130 | MS.gene90557:CDS |
| CGCCAAGAATAGAAGCACCG+GGG | 0.710465 | 2.1:-41194754 | MS.gene90557:CDS |
| GATGTATCATTCGTTCAGCG+AGG | 0.717492 | 2.1:-41193024 | MS.gene90557:CDS |
| CATCACAAATAGCATTACCA+GGG | 0.720514 | 2.1:-41193295 | MS.gene90557:CDS |
| CAGAATGTGGGAGAACACTG+TGG | 0.727384 | 2.1:-41193830 | MS.gene90557:CDS |
| CTAGGCAGAGAAACGGACAA+GGG | 0.731036 | 2.1:-41193202 | MS.gene90557:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTATTTATTTTCGAT+AGG | + | chr2.1:41193819-41193838 | None:intergenic | 10.0% |
| !! | AATAATAATTGATATCTGTT+AGG | - | chr2.1:41193829-41193848 | MS.gene90557:CDS | 15.0% |
| !! | TTTAATAGAATCTCATATAA+TGG | - | chr2.1:41193144-41193163 | MS.gene90557:CDS | 15.0% |
| !!! | AAAAATTGTTTGTTTTTCAT+AGG | + | chr2.1:41193945-41193964 | None:intergenic | 15.0% |
| !!! | AAAATTGTTTGTTTTTCATA+GGG | + | chr2.1:41193944-41193963 | None:intergenic | 15.0% |
| !!! | TCTATACTATTTTAATTTAG+TGG | - | chr2.1:41193044-41193063 | MS.gene90557:CDS | 15.0% |
| !! | TAATACATGTATATAAGTTG+TGG | + | chr2.1:41194136-41194155 | None:intergenic | 20.0% |
| !!! | CAACAATTTTTTCAATATGA+AGG | - | chr2.1:41194784-41194803 | MS.gene90557:intron | 20.0% |
| ! | AAAATTAGCTCCTTCATTAA+TGG | + | chr2.1:41195878-41195897 | None:intergenic | 25.0% |
| ! | AATTTACATCATACCGTTAA+GGG | + | chr2.1:41193762-41193781 | None:intergenic | 25.0% |
| ! | ATATAGTAGAGTAAGAACAA+AGG | - | chr2.1:41194761-41194780 | MS.gene90557:CDS | 25.0% |
| ! | ATTCTTTGACTAATTCCAAA+AGG | - | chr2.1:41195491-41195510 | MS.gene90557:intron | 25.0% |
| ! | ATTGGAGGTAATTATTATCA+TGG | - | chr2.1:41195739-41195758 | MS.gene90557:intron | 25.0% |
| ! | CTTTCTACTTATATGTAATG+TGG | - | chr2.1:41193078-41193097 | MS.gene90557:CDS | 25.0% |
| ! | TAAGAAATGTTCATCTAAGT+TGG | - | chr2.1:41193120-41193139 | MS.gene90557:CDS | 25.0% |
| ! | TAATAATTACCTCCAATTTC+AGG | + | chr2.1:41195736-41195755 | None:intergenic | 25.0% |
| ! | TAATTTACATCATACCGTTA+AGG | + | chr2.1:41193763-41193782 | None:intergenic | 25.0% |
| ! | TATATAAGTCAAGGTAACAT+TGG | - | chr2.1:41193174-41193193 | MS.gene90557:CDS | 25.0% |
| ! | TGCTTGAATATTTCACAAAA+AGG | - | chr2.1:41193446-41193465 | MS.gene90557:CDS | 25.0% |
| ! | TTACTTAAGACCATTAATGA+AGG | - | chr2.1:41195865-41195884 | MS.gene90557:intron | 25.0% |
| ! | TTCTTTGACTAATTCCAAAA+GGG | - | chr2.1:41195492-41195511 | MS.gene90557:intron | 25.0% |
| ! | TTGTGAAATATTCAAGCAAA+GGG | + | chr2.1:41193444-41193463 | None:intergenic | 25.0% |
| ! | TTTCTCAACTTTATTGTTCT+TGG | + | chr2.1:41192912-41192931 | None:intergenic | 25.0% |
| ! | TTTGTGAAATATTCAAGCAA+AGG | + | chr2.1:41193445-41193464 | None:intergenic | 25.0% |
| !! | ATTAATGAAGGAGCTAATTT+TGG | - | chr2.1:41195877-41195896 | MS.gene90557:intron | 25.0% |
| !! | ATTCTGAAAATCTTCATTAC+TGG | - | chr2.1:41193655-41193674 | MS.gene90557:intron | 25.0% |
| !! | GAAAAAGGCATATGATAATT+GGG | - | chr2.1:41195435-41195454 | MS.gene90557:intron | 25.0% |
| !! | TGAAAAAGGCATATGATAAT+TGG | - | chr2.1:41195434-41195453 | MS.gene90557:intron | 25.0% |
| !!! | TTGCAAATGTTGATTTTGTT+CGG | + | chr2.1:41195611-41195630 | None:intergenic | 25.0% |
| AAATTAGACCATGCTAAACT+GGG | - | chr2.1:41193603-41193622 | MS.gene90557:intron | 30.0% | |
| AACAACATATATGAGCTAAG+AGG | - | chr2.1:41195245-41195264 | MS.gene90557:intron | 30.0% | |
| AAGTACCTGTATTGAAAAGA+TGG | + | chr2.1:41195105-41195124 | None:intergenic | 30.0% | |
| ATCACTCACTTCAAATCAAA+AGG | - | chr2.1:41195301-41195320 | MS.gene90557:intron | 30.0% | |
| CAACTAAAATGTATCAGAGA+CGG | + | chr2.1:41194184-41194203 | None:intergenic | 30.0% | |
| CGGTATGATGTAAATTAGAA+TGG | - | chr2.1:41193766-41193785 | MS.gene90557:CDS | 30.0% | |
| GATAATAATCCTGAAATTGG+AGG | - | chr2.1:41195724-41195743 | MS.gene90557:intron | 30.0% | |
| GGAATCTTGTATATAAGTCA+AGG | - | chr2.1:41193165-41193184 | MS.gene90557:CDS | 30.0% | |
| GGTGATAATAATCCTGAAAT+TGG | - | chr2.1:41195721-41195740 | MS.gene90557:intron | 30.0% | |
| GGTTATCAAATCAAAGAACA+TGG | - | chr2.1:41193467-41193486 | MS.gene90557:CDS | 30.0% | |
| GTAATTATTATCATGGAGAC+TGG | - | chr2.1:41195746-41195765 | MS.gene90557:intron | 30.0% | |
| GTCCTTCGAAAAAATATGAT+TGG | + | chr2.1:41195060-41195079 | None:intergenic | 30.0% | |
| TCAATATGAAGGCTATATTG+AGG | - | chr2.1:41194795-41194814 | MS.gene90557:intron | 30.0% | |
| TCAGAATTCTAATCTGACTA+GGG | + | chr2.1:41193642-41193661 | None:intergenic | 30.0% | |
| TCTATGATCTTTAACAGCAA+AGG | + | chr2.1:41194677-41194696 | None:intergenic | 30.0% | |
| TCTCAACAACCTAAAATTTC+AGG | - | chr2.1:41194156-41194175 | MS.gene90557:intron | 30.0% | |
| TCTTTGACTAATTCCAAAAG+GGG | - | chr2.1:41195493-41195512 | MS.gene90557:intron | 30.0% | |
| TTAAACTGCTAACAGAATAC+AGG | + | chr2.1:41193379-41193398 | None:intergenic | 30.0% | |
| TTAAGCTTAAAGCAGCTTTA+AGG | - | chr2.1:41196010-41196029 | MS.gene90557:CDS | 30.0% | |
| TTCAGAATTCTAATCTGACT+AGG | + | chr2.1:41193643-41193662 | None:intergenic | 30.0% | |
| ! | AGATTTGCAAGTTAGTCTAA+AGG | - | chr2.1:41194516-41194535 | MS.gene90557:CDS | 30.0% |
| ! | ATCTTTTCAATACAGGTACT+TGG | - | chr2.1:41195104-41195123 | MS.gene90557:intron | 30.0% |
| ! | TTATGATGATGTAGCTAATG+AGG | - | chr2.1:41192937-41192956 | MS.gene90557:CDS | 30.0% |
| !! | AAAGTTTAGACTTGGTGTTA+AGG | - | chr2.1:41194600-41194619 | MS.gene90557:CDS | 30.0% |
| !! | ATGAGGAAATTGATGATGAT+TGG | - | chr2.1:41194428-41194447 | MS.gene90557:CDS | 30.0% |
| !! | TTTGCTGTTAAAGATCATAG+AGG | - | chr2.1:41194676-41194695 | MS.gene90557:CDS | 30.0% |
| !!! | CTCCAATCATATTTTTTCGA+AGG | - | chr2.1:41195055-41195074 | MS.gene90557:intron | 30.0% |
| AAAAATAAACCGAGACACGT+TGG | - | chr2.1:41193975-41193994 | MS.gene90557:intron | 35.0% | |
| ACATCACAAATAGCATTACC+AGG | - | chr2.1:41195676-41195695 | MS.gene90557:CDS | 35.0% | |
| ACCATGAATTACAACATGTC+AGG | - | chr2.1:41195700-41195719 | MS.gene90557:intron | 35.0% | |
| ACCTGACATGTTGTAATTCA+TGG | + | chr2.1:41195704-41195723 | None:intergenic | 35.0% | |
| AGAAGCAGAAAGTTTAGACT+TGG | - | chr2.1:41194592-41194611 | MS.gene90557:CDS | 35.0% | |
| AGTTAATCCTTCTAATTCCG+TGG | - | chr2.1:41193543-41193562 | MS.gene90557:CDS | 35.0% | |
| AGTTTAATAGTGAACACTGC+TGG | - | chr2.1:41194707-41194726 | MS.gene90557:CDS | 35.0% | |
| ATATTGCGTACATTCATCCA+CGG | + | chr2.1:41193866-41193885 | None:intergenic | 35.0% | |
| ATGAAGTTTGGAGATTGGAT+CGG | - | chr2.1:41194881-41194900 | MS.gene90557:intron | 35.0% | |
| ATGATTGGAGAAGAGTGATA+TGG | + | chr2.1:41195045-41195064 | None:intergenic | 35.0% | |
| CATCACAAATAGCATTACCA+GGG | - | chr2.1:41195677-41195696 | MS.gene90557:CDS | 35.0% | |
| CTCCATCATATTCTATGACT+TGG | + | chr2.1:41195462-41195481 | None:intergenic | 35.0% | |
| CTTACGCTTCTTAATTTCTG+TGG | + | chr2.1:41194994-41195013 | None:intergenic | 35.0% | |
| CTTTCACTGATAATTCTAGC+TGG | - | chr2.1:41194566-41194585 | MS.gene90557:CDS | 35.0% | |
| GAAATTAGACCATGCTAAAC+TGG | - | chr2.1:41193602-41193621 | MS.gene90557:intron | 35.0% | |
| GAAGTTAAATGTTGTTGTGC+TGG | - | chr2.1:41194393-41194412 | MS.gene90557:CDS | 35.0% | |
| GAATAACTACTCATCCAGTT+CGG | - | chr2.1:41195636-41195655 | MS.gene90557:CDS | 35.0% | |
| GACCAAGTCATAGAATATGA+TGG | - | chr2.1:41195457-41195476 | MS.gene90557:intron | 35.0% | |
| GCAAATGTACAGTGTAATTG+TGG | - | chr2.1:41193272-41193291 | MS.gene90557:CDS | 35.0% | |
| GCTTCTTTGATTGAGTAAGA+TGG | + | chr2.1:41192979-41192998 | None:intergenic | 35.0% | |
| GGGTCTATTATTGCATAGAA+CGG | + | chr2.1:41193424-41193443 | None:intergenic | 35.0% | |
| TGGAATGTCAAACAGAATGT+GGG | - | chr2.1:41195130-41195149 | MS.gene90557:intron | 35.0% | |
| TGTAGATTCCTTGGTGAAAA+AGG | - | chr2.1:41195420-41195439 | MS.gene90557:intron | 35.0% | |
| TGTGTTGAAAACTTGACAGA+AGG | + | chr2.1:41194002-41194021 | None:intergenic | 35.0% | |
| TTAAATGTTGTTGTGCTGGA+AGG | - | chr2.1:41194397-41194416 | MS.gene90557:CDS | 35.0% | |
| TTCTTGTATACTGCAAGTTG+CGG | + | chr2.1:41194838-41194857 | None:intergenic | 35.0% | |
| ! | GTGATTCTAAAGAGAAGAAC+TGG | + | chr2.1:41195286-41195305 | None:intergenic | 35.0% |
| ! | GTTTGCCATCTTTTCAATAC+AGG | - | chr2.1:41195097-41195116 | MS.gene90557:intron | 35.0% |
| ! | TTGCAAGTTAGTCTAAAGGA+AGG | - | chr2.1:41194520-41194539 | MS.gene90557:CDS | 35.0% |
| ! | TTTAACTTCGCAACTGATTC+TGG | + | chr2.1:41194382-41194401 | None:intergenic | 35.0% |
| !! | ATCATATGCCTTTTTCACCA+AGG | + | chr2.1:41195431-41195450 | None:intergenic | 35.0% |
| !! | CTCACAATTTTTCTGAGAAG+AGG | + | chr2.1:41193345-41193364 | None:intergenic | 35.0% |
| !! | GTGGCATTCTTGTTCTAAAA+TGG | + | chr2.1:41194261-41194280 | None:intergenic | 35.0% |
| !! | TACAGATTTTGATCCCCTTT+TGG | + | chr2.1:41195509-41195528 | None:intergenic | 35.0% |
| !! | TGTAATTGTGGAAGCATTGA+AGG | - | chr2.1:41193284-41193303 | MS.gene90557:CDS | 35.0% |
| !!! | CTGGAATCTGTGGTTTTTTT+AGG | + | chr2.1:41193915-41193934 | None:intergenic | 35.0% |
| !!! | TGATACATTTTAGTTGTGCC+AGG | - | chr2.1:41194188-41194207 | MS.gene90557:intron | 35.0% |
| AAGACGCAGGAAATCTTCTA+CGG | + | chr2.1:41194959-41194978 | None:intergenic | 40.0% | |
| AAGGAAGGAGTAGGAACATT+AGG | - | chr2.1:41194535-41194554 | MS.gene90557:CDS | 40.0% | |
| ACAGATGTCTGTAGATTCCT+TGG | - | chr2.1:41195411-41195430 | MS.gene90557:intron | 40.0% | |
| ACATTGTCGCAGAAGAACTT+CGG | - | chr2.1:41195800-41195819 | MS.gene90557:intron | 40.0% | |
| ACTGATGAAACTCATAGCAC+TGG | - | chr2.1:41195212-41195231 | MS.gene90557:intron | 40.0% | |
| AGGAGTTCACAAATGTTGGA+GGG | - | chr2.1:41195826-41195845 | MS.gene90557:intron | 40.0% | |
| AGGATAATGTCAAGTGCTCA+GGG | - | chr2.1:41195968-41195987 | MS.gene90557:intron | 40.0% | |
| AGTCATCCATGTTGTCTTGT+TGG | - | chr2.1:41194324-41194343 | MS.gene90557:CDS | 40.0% | |
| AGTTCGGATTATCAGATGGT+AGG | - | chr2.1:41195652-41195671 | MS.gene90557:CDS | 40.0% | |
| ATCCAGTTCGGATTATCAGA+TGG | - | chr2.1:41195648-41195667 | MS.gene90557:CDS | 40.0% | |
| ATGTTGTAATTCATGGTCCC+TGG | + | chr2.1:41195697-41195716 | None:intergenic | 40.0% | |
| CAAAACTACCTGGTTTAGCT+AGG | - | chr2.1:41192999-41193018 | MS.gene90557:CDS | 40.0% | |
| CAAACTTCATCATGCAAAGC+AGG | + | chr2.1:41194871-41194890 | None:intergenic | 40.0% | |
| CTGAACGAATGATACATCTG+AGG | + | chr2.1:41195946-41195965 | None:intergenic | 40.0% | |
| CTGCTTTGCATGATGAAGTT+TGG | - | chr2.1:41194869-41194888 | MS.gene90557:intron | 40.0% | |
| GCATGATGAAGTTTGGAGAT+TGG | - | chr2.1:41194876-41194895 | MS.gene90557:intron | 40.0% | |
| GCTTAGGAGTTCACAAATGT+TGG | - | chr2.1:41195822-41195841 | MS.gene90557:intron | 40.0% | |
| GTGGAATGTCAAACAGAATG+TGG | - | chr2.1:41195129-41195148 | MS.gene90557:intron | 40.0% | |
| GTTCGGATTATCAGATGGTA+GGG | - | chr2.1:41195653-41195672 | MS.gene90557:CDS | 40.0% | |
| TACCATCTGATAATCCGAAC+TGG | + | chr2.1:41195653-41195672 | None:intergenic | 40.0% | |
| TAGGAGTTCACAAATGTTGG+AGG | - | chr2.1:41195825-41195844 | MS.gene90557:intron | 40.0% | |
| TATTGCGTACATTCATCCAC+GGG | + | chr2.1:41193865-41193884 | None:intergenic | 40.0% | |
| TCAAAGAAGCCAAAACTACC+TGG | - | chr2.1:41192989-41193008 | MS.gene90557:CDS | 40.0% | |
| TCAATACAGGTACTTGGTAG+TGG | - | chr2.1:41195110-41195129 | MS.gene90557:intron | 40.0% | |
| TGATCACATGTAGCCCTTAA+CGG | - | chr2.1:41193746-41193765 | MS.gene90557:CDS | 40.0% | |
| TGATGTAGCTAATGAGGATG+AGG | - | chr2.1:41192943-41192962 | MS.gene90557:CDS | 40.0% | |
| TGCAAATCTCCAGTTAGAAG+TGG | + | chr2.1:41194505-41194524 | None:intergenic | 40.0% | |
| TTCTTAATTTCTGTGGCTCG+CGG | + | chr2.1:41194987-41195006 | None:intergenic | 40.0% | |
| TTGCAATACCTAGCTAAACC+AGG | + | chr2.1:41193010-41193029 | None:intergenic | 40.0% | |
| TTGGAGAAGAGTGATATGGA+TGG | + | chr2.1:41195041-41195060 | None:intergenic | 40.0% | |
| TTGGATCCAACAAGACAACA+TGG | + | chr2.1:41194333-41194352 | None:intergenic | 40.0% | |
| ! | CTAGCTAAACCAGGTAGTTT+TGG | + | chr2.1:41193001-41193020 | None:intergenic | 40.0% |
| ! | CTTTGAAAGCCACGAAGTAA+AGG | - | chr2.1:41194462-41194481 | MS.gene90557:CDS | 40.0% |
| ! | GAGACGGATCCTGAAATTTT+AGG | + | chr2.1:41194168-41194187 | None:intergenic | 40.0% |
| ! | GTTAGTCTAAAGGAAGGAGT+AGG | - | chr2.1:41194526-41194545 | MS.gene90557:CDS | 40.0% |
| ! | GTTTTTCATAGGGACTAAGC+TGG | + | chr2.1:41193934-41193953 | None:intergenic | 40.0% |
| ! | TGTCTTGTTGGATCCAAACA+CGG | - | chr2.1:41194336-41194355 | MS.gene90557:CDS | 40.0% |
| ! | TTTTATCGCGTGTTACACTG+AGG | - | chr2.1:41194061-41194080 | MS.gene90557:CDS | 40.0% |
| !! | AATTGTGGAAGCATTGAAGG+TGG | - | chr2.1:41193287-41193306 | MS.gene90557:CDS | 40.0% |
| !! | AGCTTAAAGCAGCTTTAAGG+TGG | - | chr2.1:41196013-41196032 | MS.gene90557:CDS | 40.0% |
| !! | ATTATCATGGAGACTGGTCT+AGG | - | chr2.1:41195752-41195771 | MS.gene90557:intron | 40.0% |
| !! | CTTAAAGCAGCTTTAAGGTG+GGG | - | chr2.1:41196015-41196034 | MS.gene90557:CDS | 40.0% |
| !! | GCTGGAAGGTGATTTTAATG+AGG | - | chr2.1:41194411-41194430 | MS.gene90557:CDS | 40.0% |
| !! | GCTTAAAGCAGCTTTAAGGT+GGG | - | chr2.1:41196014-41196033 | MS.gene90557:CDS | 40.0% |
| !! | GTTTAGACTTGGTGTTAAGG+TGG | - | chr2.1:41194603-41194622 | MS.gene90557:CDS | 40.0% |
| !! | TTAAAGCAGCTTTAAGGTGG+GGG | - | chr2.1:41196016-41196035 | MS.gene90557:CDS | 40.0% |
| ACGGGAAACGTTGTTCAAGT+TGG | - | chr2.1:41194355-41194374 | MS.gene90557:CDS | 45.0% | |
| ACTTCATCATGCAAAGCAGG+TGG | + | chr2.1:41194868-41194887 | None:intergenic | 45.0% | |
| AGTACCCAAGACACATGTCT+TGG | + | chr2.1:41195174-41195193 | None:intergenic | 45.0% | |
| AGTATGCATCTGCAAAGGGA+AGG | - | chr2.1:41195569-41195588 | MS.gene90557:intron | 45.0% | |
| ATGCCACCTCACTTATTCAC+AGG | - | chr2.1:41194274-41194293 | MS.gene90557:intron | 45.0% | |
| CACCTCACTTATTCACAGGA+GGG | - | chr2.1:41194278-41194297 | MS.gene90557:intron | 45.0% | |
| CAGCAGTATGCATCTGCAAA+GGG | - | chr2.1:41195565-41195584 | MS.gene90557:intron | 45.0% | |
| CATGCCAAGACATGTGTCTT+GGG | - | chr2.1:41195167-41195186 | MS.gene90557:intron | 45.0% | |
| CTAAGAGGTCTCATTGCTGA+TGG | - | chr2.1:41195260-41195279 | MS.gene90557:intron | 45.0% | |
| CTGTAAGCCACGGAATTAGA+AGG | + | chr2.1:41193553-41193572 | None:intergenic | 45.0% | |
| CTTACAGGTCAGTGAAGAAG+TGG | - | chr2.1:41193566-41193585 | MS.gene90557:intron | 45.0% | |
| CTTCTAATTCCGTGGCTTAC+AGG | - | chr2.1:41193551-41193570 | MS.gene90557:CDS | 45.0% | |
| GAGATTGGATCGGATAGCAA+AGG | - | chr2.1:41194891-41194910 | MS.gene90557:intron | 45.0% | |
| GAGGATAATGTCAAGTGCTC+AGG | - | chr2.1:41195967-41195986 | MS.gene90557:intron | 45.0% | |
| GATGTATCATTCGTTCAGCG+AGG | - | chr2.1:41195948-41195967 | MS.gene90557:intron | 45.0% | |
| GCAAAGACTCTGCTCATCTT+TGG | - | chr2.1:41193317-41193336 | MS.gene90557:CDS | 45.0% | |
| GTATGCATCTGCAAAGGGAA+GGG | - | chr2.1:41195570-41195589 | MS.gene90557:intron | 45.0% | |
| TAATGTCAAGTGCTCAGGGA+AGG | - | chr2.1:41195972-41195991 | MS.gene90557:intron | 45.0% | |
| TCACTTATTCACAGGAGGGA+AGG | - | chr2.1:41194282-41194301 | MS.gene90557:intron | 45.0% | |
| TGAACAACGTTTCCCGTGTT+TGG | + | chr2.1:41194352-41194371 | None:intergenic | 45.0% | |
| TGGAGGGTGATGATATGCAA+AGG | - | chr2.1:41195842-41195861 | MS.gene90557:intron | 45.0% | |
| TTCCCTCCTGTGAATAAGTG+AGG | + | chr2.1:41194283-41194302 | None:intergenic | 45.0% | |
| TTGGATCGGATAGCAAAGGA+TGG | - | chr2.1:41194895-41194914 | MS.gene90557:intron | 45.0% | |
| ! | GTCTTGTTGGATCCAAACAC+GGG | - | chr2.1:41194337-41194356 | MS.gene90557:CDS | 45.0% |
| ! | GTGTTACACTGAGGAGCATA+AGG | - | chr2.1:41194070-41194089 | MS.gene90557:CDS | 45.0% |
| ACAGAAGGACCAACGTGTCT+CGG | + | chr2.1:41193987-41194006 | None:intergenic | 50.0% | |
| ACCATGCTAAACTGGGTGAC+AGG | - | chr2.1:41193610-41193629 | MS.gene90557:intron | 50.0% | |
| ACCTGTCACCCAGTTTAGCA+TGG | + | chr2.1:41193614-41193633 | None:intergenic | 50.0% | |
| ACGAAGTAAAGGAACGCGAG+GGG | - | chr2.1:41194473-41194492 | MS.gene90557:CDS | 50.0% | |
| AGGGACTAAGCTGGAATCTG+TGG | + | chr2.1:41193925-41193944 | None:intergenic | 50.0% | |
| ATTCACAGGAGGGAAGGTTG+AGG | - | chr2.1:41194288-41194307 | MS.gene90557:intron | 50.0% | |
| CACGAAGTAAAGGAACGCGA+GGG | - | chr2.1:41194472-41194491 | MS.gene90557:CDS | 50.0% | |
| CAGAATGTGGGAGAACACTG+TGG | - | chr2.1:41195142-41195161 | MS.gene90557:intron | 50.0% | |
| CAGATGCATACTGCTGCTCT+TGG | + | chr2.1:41195561-41195580 | None:intergenic | 50.0% | |
| CCACCTCACTTATTCACAGG+AGG | - | chr2.1:41194277-41194296 | MS.gene90557:intron | 50.0% | |
| CCTCCTGTGAATAAGTGAGG+TGG | + | chr2.1:41194280-41194299 | None:intergenic | 50.0% | |
| CGAATCCCGTCACAATATCC+AGG | + | chr2.1:41194631-41194650 | None:intergenic | 50.0% | |
| CTAGGCAGAGAAACGGACAA+GGG | - | chr2.1:41195770-41195789 | MS.gene90557:intron | 50.0% | |
| CTTCACTGACCTGTAAGCCA+CGG | + | chr2.1:41193563-41193582 | None:intergenic | 50.0% | |
| GCAGCAGTATGCATCTGCAA+AGG | - | chr2.1:41195564-41195583 | MS.gene90557:intron | 50.0% | |
| GCATGCCAAGACATGTGTCT+TGG | - | chr2.1:41195166-41195185 | MS.gene90557:intron | 50.0% | |
| GGGAAAAGGCCACTTCTAAC+TGG | - | chr2.1:41194493-41194512 | MS.gene90557:CDS | 50.0% | |
| GTGGCTCCTGGATATTGTGA+CGG | - | chr2.1:41194622-41194641 | MS.gene90557:CDS | 50.0% | |
| TAAAGGAACGCGAGGGGAAA+AGG | - | chr2.1:41194479-41194498 | MS.gene90557:CDS | 50.0% | |
| TATTCTTGGCGGTGAAGACC+TGG | + | chr2.1:41194209-41194228 | None:intergenic | 50.0% | |
| TCGCAGAAGAACTTCGGCTT+AGG | - | chr2.1:41195806-41195825 | MS.gene90557:intron | 50.0% | |
| TCTAGGCAGAGAAACGGACA+AGG | - | chr2.1:41195769-41195788 | MS.gene90557:intron | 50.0% | |
| TGAAGAAGTGGAGCGTGCTT+TGG | - | chr2.1:41193578-41193597 | MS.gene90557:intron | 50.0% | |
| TGGCTCCTGGATATTGTGAC+GGG | - | chr2.1:41194623-41194642 | MS.gene90557:CDS | 50.0% | |
| TTCACAGGAGGGAAGGTTGA+GGG | - | chr2.1:41194289-41194308 | MS.gene90557:intron | 50.0% | |
| ! | ACCGCCAAGAATAGAAGCAC+CGG | - | chr2.1:41194216-41194235 | MS.gene90557:intron | 50.0% |
| ! | AGCTGCAGATTCTTTTCCCC+CGG | + | chr2.1:41194238-41194257 | None:intergenic | 50.0% |
| !! | GACTGGTCTAGGCAGAGAAA+CGG | - | chr2.1:41195763-41195782 | MS.gene90557:intron | 50.0% |
| CCACGAAGTAAAGGAACGCG+AGG | - | chr2.1:41194471-41194490 | MS.gene90557:CDS | 55.0% | |
| CCCGGTGCTTCTATTCTTGG+CGG | + | chr2.1:41194220-41194239 | None:intergenic | 55.0% | |
| CCTCGCGTTCCTTTACTTCG+TGG | + | chr2.1:41194474-41194493 | None:intergenic | 55.0% | |
| GCAGAGAAACGGACAAGGGT+TGG | - | chr2.1:41195774-41195793 | MS.gene90557:intron | 55.0% | |
| GCTCAGGGAAGGCTGTTGTT+GGG | - | chr2.1:41195983-41196002 | MS.gene90557:CDS | 55.0% | |
| GTTAGGCATGATGACACCCG+TGG | - | chr2.1:41193846-41193865 | MS.gene90557:CDS | 55.0% | |
| TCCCCCGGTGCTTCTATTCT+TGG | + | chr2.1:41194223-41194242 | None:intergenic | 55.0% | |
| TGCTCAGGGAAGGCTGTTGT+TGG | - | chr2.1:41195982-41196001 | MS.gene90557:CDS | 55.0% | |
| !! | CCGCCAAGAATAGAAGCACC+GGG | - | chr2.1:41194217-41194236 | MS.gene90557:intron | 55.0% |
| !! | CGCCAAGAATAGAAGCACCG+GGG | - | chr2.1:41194218-41194237 | MS.gene90557:intron | 55.0% |
| !! | CTTGGTGTTAAGGTGGCTCC+TGG | - | chr2.1:41194610-41194629 | MS.gene90557:CDS | 55.0% |
| !! | GCCAAGAATAGAAGCACCGG+GGG | - | chr2.1:41194219-41194238 | MS.gene90557:intron | 55.0% |
| CAGGGAAGGCTGTTGTTGGG+TGG | - | chr2.1:41195986-41196005 | MS.gene90557:CDS | 60.0% | |
| GACGGGATTCGAGTGCGTGA+GGG | - | chr2.1:41194640-41194659 | MS.gene90557:CDS | 60.0% | |
| GGGAAGGTTGAGGGAGAGCA+AGG | - | chr2.1:41194298-41194317 | MS.gene90557:CDS | 60.0% | |
| TGACGGGATTCGAGTGCGTG+AGG | - | chr2.1:41194639-41194658 | MS.gene90557:CDS | 60.0% | |
| GCTCGCGGACAAGAAGACGC+AGG | + | chr2.1:41194972-41194991 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 41192899 | 41196095 | 41192899 | ID=MS.gene90557 |
| chr2.1 | mRNA | 41192899 | 41196095 | 41192899 | ID=MS.gene90557.t1;Parent=MS.gene90557 |
| chr2.1 | exon | 41195974 | 41196095 | 41195974 | ID=MS.gene90557.t1.exon1;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41195974 | 41196095 | 41195974 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41195635 | 41195710 | 41195635 | ID=MS.gene90557.t1.exon2;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41195635 | 41195710 | 41195635 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41195363 | 41195421 | 41195363 | ID=MS.gene90557.t1.exon3;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41195363 | 41195421 | 41195363 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41194291 | 41194784 | 41194291 | ID=MS.gene90557.t1.exon4;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41194291 | 41194784 | 41194291 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41193986 | 41194146 | 41193986 | ID=MS.gene90557.t1.exon5;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41193986 | 41194146 | 41193986 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41193672 | 41193875 | 41193672 | ID=MS.gene90557.t1.exon6;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41193672 | 41193875 | 41193672 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| chr2.1 | exon | 41192899 | 41193579 | 41192899 | ID=MS.gene90557.t1.exon7;Parent=MS.gene90557.t1 |
| chr2.1 | CDS | 41192899 | 41193579 | 41192899 | ID=cds.MS.gene90557.t1;Parent=MS.gene90557.t1 |
| Gene Sequence |
| Protein sequence |
