Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68707.t1 | XP_013463825.1 | 98.9 | 558 | 6 | 0 | 3 | 560 | 36 | 593 | 0.00E+00 | 1101.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68707.t1 | F4IPM3 | 62.4 | 582 | 184 | 7 | 3 | 560 | 29 | 599 | 2.6e-196 | 686.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68707.t1 | A0A072VIC7 | 98.9 | 558 | 6 | 0 | 3 | 560 | 36 | 593 | 0.0e+00 | 1101.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050903 | MS.gene68707 | 0.804148 | 2.48E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67632 | MS.gene68707 | PPI |
| MS.gene90557 | MS.gene68707 | PPI |
| MS.gene036365 | MS.gene68707 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68707.t1 | MTR_2g450080 | 98.571 | 560 | 8 | 0 | 1 | 560 | 34 | 593 | 0.0 | 1150 |
| MS.gene68707.t1 | MTR_4g090970 | 55.092 | 599 | 224 | 10 | 1 | 560 | 35 | 627 | 0.0 | 619 |
| MS.gene68707.t1 | MTR_4g128600 | 52.874 | 609 | 232 | 8 | 1 | 560 | 33 | 635 | 0.0 | 611 |
| MS.gene68707.t1 | MTR_2g011810 | 54.591 | 599 | 231 | 8 | 1 | 560 | 36 | 632 | 0.0 | 607 |
| MS.gene68707.t1 | MTR_8g104490 | 41.882 | 425 | 225 | 8 | 3 | 421 | 32 | 440 | 1.92e-103 | 320 |
| MS.gene68707.t1 | MTR_8g104510 | 46.260 | 361 | 187 | 5 | 3 | 360 | 32 | 388 | 4.85e-102 | 316 |
| MS.gene68707.t1 | MTR_4g106810 | 47.414 | 348 | 178 | 4 | 3 | 349 | 25 | 368 | 7.92e-100 | 313 |
| MS.gene68707.t1 | MTR_6g083730 | 41.928 | 415 | 221 | 7 | 3 | 403 | 34 | 442 | 1.38e-99 | 310 |
| MS.gene68707.t1 | MTR_8g104490 | 41.758 | 364 | 192 | 6 | 62 | 421 | 28 | 375 | 1.99e-91 | 287 |
| MS.gene68707.t1 | MTR_6g083320 | 47.368 | 266 | 136 | 3 | 3 | 265 | 34 | 298 | 1.55e-77 | 251 |
| MS.gene68707.t1 | MTR_7g112000 | 36.066 | 366 | 204 | 11 | 11 | 363 | 31 | 379 | 3.04e-58 | 203 |
| MS.gene68707.t1 | MTR_7g111980 | 28.645 | 583 | 322 | 20 | 13 | 560 | 51 | 574 | 9.50e-47 | 172 |
| MS.gene68707.t1 | MTR_7g111980 | 28.810 | 538 | 296 | 19 | 58 | 560 | 6 | 491 | 1.26e-44 | 165 |
| MS.gene68707.t1 | MTR_7g111960 | 32.836 | 335 | 216 | 6 | 21 | 351 | 60 | 389 | 2.55e-44 | 166 |
| MS.gene68707.t1 | MTR_6g083810 | 37.624 | 101 | 60 | 2 | 3 | 101 | 34 | 133 | 5.79e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68707.t1 | AT2G24300 | 64.076 | 579 | 183 | 11 | 1 | 560 | 31 | 603 | 0.0 | 709 |
| MS.gene68707.t1 | AT2G24300 | 64.076 | 579 | 183 | 11 | 1 | 560 | 27 | 599 | 0.0 | 709 |
| MS.gene68707.t1 | AT4G31000 | 61.210 | 562 | 186 | 6 | 1 | 560 | 31 | 562 | 0.0 | 674 |
| MS.gene68707.t1 | AT2G24300 | 63.158 | 551 | 178 | 11 | 29 | 560 | 8 | 552 | 0.0 | 662 |
| MS.gene68707.t1 | AT5G57580 | 52.846 | 615 | 220 | 12 | 3 | 557 | 33 | 637 | 0.0 | 598 |
| MS.gene68707.t1 | AT2G18750 | 54.422 | 588 | 234 | 9 | 1 | 560 | 37 | 618 | 0.0 | 597 |
| MS.gene68707.t1 | AT2G18750 | 54.422 | 588 | 234 | 9 | 1 | 560 | 37 | 618 | 0.0 | 597 |
| MS.gene68707.t1 | AT2G18750 | 54.422 | 588 | 234 | 9 | 1 | 560 | 37 | 618 | 0.0 | 597 |
| MS.gene68707.t1 | AT4G25800 | 54.608 | 586 | 230 | 10 | 1 | 560 | 20 | 595 | 0.0 | 592 |
| MS.gene68707.t1 | AT4G25800 | 54.608 | 586 | 230 | 10 | 1 | 560 | 20 | 595 | 0.0 | 592 |
| MS.gene68707.t1 | AT4G31000 | 55.536 | 560 | 198 | 7 | 6 | 560 | 28 | 541 | 0.0 | 590 |
| MS.gene68707.t1 | AT5G62570 | 44.063 | 379 | 199 | 9 | 2 | 374 | 12 | 383 | 4.38e-100 | 312 |
| MS.gene68707.t1 | AT5G62570 | 44.180 | 378 | 198 | 9 | 3 | 374 | 28 | 398 | 2.57e-99 | 310 |
| MS.gene68707.t1 | AT5G62570 | 45.614 | 342 | 175 | 8 | 3 | 340 | 28 | 362 | 6.99e-95 | 295 |
| MS.gene68707.t1 | AT1G73805 | 40.845 | 426 | 217 | 12 | 17 | 437 | 46 | 441 | 4.17e-86 | 274 |
| MS.gene68707.t1 | AT5G62570 | 48.134 | 268 | 129 | 7 | 3 | 267 | 28 | 288 | 6.97e-75 | 240 |
| MS.gene68707.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 4 | 351 | 28 | 363 | 1.28e-74 | 243 |
| MS.gene68707.t1 | AT5G26920 | 39.205 | 352 | 194 | 9 | 4 | 351 | 28 | 363 | 3.18e-73 | 244 |
| MS.gene68707.t1 | AT5G26920 | 38.920 | 352 | 187 | 10 | 4 | 351 | 28 | 355 | 4.37e-71 | 238 |
Find 134 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCGCGTTCCTTTACTTCA+TGG | 0.205973 | 2.3:-38810511 | None:intergenic |
| AAAATTAGCTCCTTCATTAA+TGG | 0.231011 | 2.3:-38811898 | None:intergenic |
| TAATAATTACCTCCAATTTC+AGG | 0.231327 | 2.3:-38811756 | None:intergenic |
| GTGGCATTCTTGTTCTAAAA+TGG | 0.234537 | 2.3:-38810298 | None:intergenic |
| TTAAGCTTAAAGCAGCTTTA+AGG | 0.234780 | 2.3:+38812033 | MS.gene68707:CDS |
| ATTAATGAAGGAGCTAATTT+TGG | 0.250528 | 2.3:+38811900 | MS.gene68707:CDS |
| TTCAACTTAGCAACTGATTC+TGG | 0.274631 | 2.3:-38810419 | None:intergenic |
| TACTGATTTCGATCCCCTTT+TGG | 0.278841 | 2.3:-38811529 | None:intergenic |
| GAAATTAGACCATGCTAAAC+TGG | 0.287354 | 2.3:+38809632 | MS.gene68707:CDS |
| CTGCTTTGCATGATGAAGTT+TGG | 0.307314 | 2.3:+38810896 | MS.gene68707:CDS |
| TGTAGATTCCTTGGTGAAAA+AGG | 0.308211 | 2.3:+38811443 | MS.gene68707:CDS |
| TGAACAACGTTTCCCGTGTT+TGG | 0.311391 | 2.3:-38810389 | None:intergenic |
| ACATCACAAATAGCATTATC+AGG | 0.313164 | 2.3:+38811699 | MS.gene68707:CDS |
| GGAGATAATAATCCTGAAAT+TGG | 0.329346 | 2.3:+38811744 | MS.gene68707:CDS |
| TCCTGACATATTGTAATTCA+TGG | 0.332092 | 2.3:-38811724 | None:intergenic |
| GCAAAGACTCTGCTCATCTT+TGG | 0.340248 | 2.3:+38809345 | MS.gene68707:CDS |
| ATGAGGAAATTGATGATGAT+TGG | 0.358972 | 2.3:+38810468 | MS.gene68707:CDS |
| TAACACCAAGTCTAAACTTT+CGG | 0.374326 | 2.3:-38810637 | None:intergenic |
| TCTTATCCAGCTAGAATTAT+CGG | 0.375347 | 2.3:-38810612 | None:intergenic |
| GGGAAAAGGCCACTTCTAAC+TGG | 0.383127 | 2.3:+38810533 | MS.gene68707:CDS |
| AAGGAAGGAGTAGGAACATT+AGG | 0.389807 | 2.3:+38810575 | MS.gene68707:CDS |
| GCATGATGAAGTTTGGAGAT+TGG | 0.410980 | 2.3:+38810903 | MS.gene68707:CDS |
| CCCGGTGCTTCTATTCTTGG+CGG | 0.415229 | 2.3:-38810257 | None:intergenic |
| TTCTTTGACTAATTCCAAAA+GGG | 0.417389 | 2.3:+38811515 | MS.gene68707:CDS |
| CAGATGCATACTGCTGCTCT+TGG | 0.421224 | 2.3:-38811581 | None:intergenic |
| TAAAGGAACGCGAGGGGAAA+AGG | 0.424802 | 2.3:+38810519 | MS.gene68707:CDS |
| ATTGGAGGTAATTATTATCA+TGG | 0.428342 | 2.3:+38811762 | MS.gene68707:CDS |
| TGCTCAGGCAAGGCTGTTGT+TGG | 0.429293 | 2.3:+38812005 | MS.gene68707:CDS |
| TGAAGAAGTGGAGCGTGCTT+TGG | 0.435844 | 2.3:+38809608 | MS.gene68707:CDS |
| ATTCTTTGACTAATTCCAAA+AGG | 0.441002 | 2.3:+38811514 | MS.gene68707:CDS |
| TCGCAGAAGAACTTCGGCTT+AGG | 0.447943 | 2.3:+38811829 | MS.gene68707:CDS |
| ATCACTCACTTCAAATCAAA+AGG | 0.454320 | 2.3:+38811328 | MS.gene68707:CDS |
| TACCATCTGATAATCCGAAC+TGG | 0.468563 | 2.3:-38811673 | None:intergenic |
| AAAGTTTAGACTTGGTGTTA+AGG | 0.469299 | 2.3:+38810640 | MS.gene68707:CDS |
| CTTGGTGTTAAGGTGGCTCC+TGG | 0.469576 | 2.3:+38810650 | MS.gene68707:CDS |
| AGTGATCCATGTTGTCTTGT+TGG | 0.470203 | 2.3:+38810364 | MS.gene68707:CDS |
| GTGATTCTAAAGAAAAGAAC+TGG | 0.470764 | 2.3:-38811310 | None:intergenic |
| TCAATACAGGTACTTGGTAG+TGG | 0.472613 | 2.3:+38811137 | MS.gene68707:intron |
| CTCCATCATATTCTATGACT+TGG | 0.480405 | 2.3:-38811482 | None:intergenic |
| ATTATCATGGAGACTGGTCT+AGG | 0.480685 | 2.3:+38811775 | MS.gene68707:CDS |
| GCTTAGGAGTTCGCAAATGT+TGG | 0.483183 | 2.3:+38811845 | MS.gene68707:CDS |
| TTCACAGGAGGGAAGGTTGA+GGG | 0.486109 | 2.3:+38810329 | MS.gene68707:CDS |
| ACCATGAATTACAATATGTC+AGG | 0.487561 | 2.3:+38811723 | MS.gene68707:CDS |
| TGTAATTGTGGAAGCTTTGA+AGG | 0.490261 | 2.3:+38809312 | MS.gene68707:CDS |
| CTTTGAAAGCCATGAAGTAA+AGG | 0.491778 | 2.3:+38810502 | MS.gene68707:CDS |
| CTTTCACCGATAATTCTAGC+TGG | 0.492240 | 2.3:+38810606 | MS.gene68707:CDS |
| GGGAAGGTTGAGGGAGAGCA+AGG | 0.502361 | 2.3:+38810338 | MS.gene68707:CDS |
| AGCTTAAAGCAGCTTTAAGG+TGG | 0.507495 | 2.3:+38812036 | MS.gene68707:CDS |
| CAGGCAAGGCTGTTGTTGGG+TGG | 0.514153 | 2.3:+38812009 | MS.gene68707:CDS |
| ACCATGCTAAACTGGGTGAC+AGG | 0.518344 | 2.3:+38809640 | MS.gene68707:CDS |
| CGAATCCCGTCACAATATCC+AGG | 0.519800 | 2.3:-38810668 | None:intergenic |
| TAGGAGTTCGCAAATGTTGG+AGG | 0.522224 | 2.3:+38811848 | MS.gene68707:CDS |
| CAAACTTCATCATGCAAAGC+AGG | 0.525398 | 2.3:-38810895 | None:intergenic |
| CATGCTAAGACATGTGTGTT+GGG | 0.526739 | 2.3:+38811194 | MS.gene68707:CDS |
| GAGGATAATGTCAAGTGCTC+AGG | 0.527975 | 2.3:+38811990 | MS.gene68707:CDS |
| GTAATTATTATCATGGAGAC+TGG | 0.529490 | 2.3:+38811769 | MS.gene68707:CDS |
| GCAGATGTCTGTAGATTCCT+TGG | 0.531398 | 2.3:+38811434 | MS.gene68707:intron |
| GCTCAGGCAAGGCTGTTGTT+GGG | 0.534129 | 2.3:+38812006 | MS.gene68707:CDS |
| ATTCACAGGAGGGAAGGTTG+AGG | 0.534510 | 2.3:+38810328 | MS.gene68707:CDS |
| CAGCAGTATGCATCTGCAAA+GGG | 0.538227 | 2.3:+38811588 | MS.gene68707:CDS |
| ACGGGAAACGTTGTTCAAGT+TGG | 0.538321 | 2.3:+38810395 | MS.gene68707:CDS |
| AGATTTGCAAGTTAGTCTAA+AGG | 0.541446 | 2.3:+38810556 | MS.gene68707:CDS |
| ACCGCCAAGAATAGAAGCAC+CGG | 0.541459 | 2.3:+38810256 | MS.gene68707:CDS |
| TCAAATGTACAGTGTAATTG+TGG | 0.542933 | 2.3:+38809300 | None:intergenic |
| TCTATGATCTTTAACAGCAA+AGG | 0.544423 | 2.3:-38810714 | None:intergenic |
| CTTACACTTCTTAATTTCTG+TGG | 0.544648 | 2.3:-38811018 | None:intergenic |
| GACTGGTCTAGGCAGAGAAA+CGG | 0.545642 | 2.3:+38811786 | MS.gene68707:CDS |
| TTACTTAAGACCATTAATGA+AGG | 0.546732 | 2.3:+38811888 | MS.gene68707:CDS |
| TAAGTTGAATGTTGTTGTGC+TGG | 0.549961 | 2.3:+38810433 | MS.gene68707:CDS |
| GCTTAAAGCAGCTTTAAGGT+GGG | 0.551907 | 2.3:+38812037 | MS.gene68707:CDS |
| GATAATAATCCTGAAATTGG+AGG | 0.552098 | 2.3:+38811747 | MS.gene68707:CDS |
| AGTTCGGATTATCAGATGGT+AGG | 0.552487 | 2.3:+38811675 | MS.gene68707:CDS |
| TGGCTCCTGGATATTGTGAC+GGG | 0.555314 | 2.3:+38810663 | MS.gene68707:CDS |
| TTCTTAATTTCTGTGGCTCG+CGG | 0.555637 | 2.3:-38811011 | None:intergenic |
| GACCAAGTCATAGAATATGA+TGG | 0.555949 | 2.3:+38811480 | MS.gene68707:CDS |
| CTAAGAGGTCTCATTGCTGA+TGG | 0.560083 | 2.3:+38811287 | MS.gene68707:CDS |
| GTTCGGATTATCAGATGGTA+GGG | 0.561192 | 2.3:+38811676 | MS.gene68707:CDS |
| CCGCCAAGAATAGAAGCACC+GGG | 0.561488 | 2.3:+38810257 | MS.gene68707:CDS |
| AGAAGCCGAAAGTTTAGACT+TGG | 0.563077 | 2.3:+38810632 | MS.gene68707:CDS |
| ATGAAGTTTGGAGATTGGAT+CGG | 0.564012 | 2.3:+38810908 | MS.gene68707:CDS |
| ACATTGTCGCAGAAGAACTT+CGG | 0.565117 | 2.3:+38811823 | MS.gene68707:CDS |
| TGTCTTGTTGGATCCAAACA+CGG | 0.566446 | 2.3:+38810376 | MS.gene68707:CDS |
| GAATAACTACTCATCCAGTT+CGG | 0.566553 | 2.3:+38811659 | MS.gene68707:CDS |
| GTTTAGACTTGGTGTTAAGG+TGG | 0.566982 | 2.3:+38810643 | MS.gene68707:CDS |
| GTTAGTCTAAAGGAAGGAGT+AGG | 0.569301 | 2.3:+38810566 | MS.gene68707:CDS |
| CTTAAAGCAGCTTTAAGGTG+GGG | 0.570067 | 2.3:+38812038 | MS.gene68707:CDS |
| TTGCAAGTTAGTCTAAAGGA+AGG | 0.570603 | 2.3:+38810560 | MS.gene68707:CDS |
| TCACTTATTCACAGGAGGGA+AGG | 0.579079 | 2.3:+38810322 | MS.gene68707:CDS |
| TGCAAATCTCCAGTTAGAAG+TGG | 0.579936 | 2.3:-38810542 | None:intergenic |
| TGACGGGATTCGAGTGCGTG+AGG | 0.580615 | 2.3:+38810679 | MS.gene68707:CDS |
| GTGGAATGTCAAACAGAATG+TGG | 0.581489 | 2.3:+38811156 | MS.gene68707:CDS |
| ATGCCACCTCACTTATTCAC+AGG | 0.582197 | 2.3:+38810314 | MS.gene68707:CDS |
| GTCTTGTTGGATCCAAACAC+GGG | 0.582870 | 2.3:+38810377 | MS.gene68707:CDS |
| GCAGCAGTATGCATCTGCAA+AGG | 0.584416 | 2.3:+38811587 | MS.gene68707:CDS |
| TTTGCTGTTAAAGATCATAG+AGG | 0.584829 | 2.3:+38810716 | MS.gene68707:CDS |
| TCTTTGACTAATTCCAAAAG+GGG | 0.586778 | 2.3:+38811516 | MS.gene68707:CDS |
| CTTACAGGTAAGTGAAGAAG+TGG | 0.588186 | 2.3:+38809596 | MS.gene68707:intron |
| GCATGCTAAGACATGTGTGT+TGG | 0.592550 | 2.3:+38811193 | MS.gene68707:CDS |
| GTGGCTCCTGGATATTGTGA+CGG | 0.594325 | 2.3:+38810662 | MS.gene68707:CDS |
| GTATGCATCTGCAAAGGGAA+GGG | 0.595195 | 2.3:+38811593 | MS.gene68707:CDS |
| AGTATGCATCTGCAAAGGGA+AGG | 0.595436 | 2.3:+38811592 | MS.gene68707:CDS |
| ACTGATGAAACTCATAGCAC+TGG | 0.598016 | 2.3:+38811239 | MS.gene68707:CDS |
| AAATTAGACCATGCTAAACT+GGG | 0.600527 | 2.3:+38809633 | MS.gene68707:CDS |
| ACCTGTCACCCAGTTTAGCA+TGG | 0.604323 | 2.3:-38809641 | None:intergenic |
| TTGAATGTTGTTGTGCTGGA+AGG | 0.607235 | 2.3:+38810437 | MS.gene68707:CDS |
| AAGACGCAGGAAATCTTCTA+CGG | 0.608096 | 2.3:-38810983 | None:intergenic |
| TAATGTCAAGTGCTCAGGCA+AGG | 0.608603 | 2.3:+38811995 | MS.gene68707:CDS |
| GACGGGATTCGAGTGCGTGA+GGG | 0.611142 | 2.3:+38810680 | MS.gene68707:CDS |
| ATCCAGTTCGGATTATCAGA+TGG | 0.612546 | 2.3:+38811671 | MS.gene68707:CDS |
| GATGTATCATTCGTTTAGCG+AGG | 0.612785 | 2.3:+38811971 | MS.gene68707:CDS |
| GAGATTGGATCGGATAGCAA+AGG | 0.612915 | 2.3:+38810918 | MS.gene68707:CDS |
| CCATGAAGTAAAGGAACGCG+AGG | 0.615876 | 2.3:+38810511 | MS.gene68707:CDS |
| TCTAGGCAGAGAAACGGACA+AGG | 0.618669 | 2.3:+38811792 | MS.gene68707:CDS |
| TGGAATGTCAAACAGAATGT+GGG | 0.623286 | 2.3:+38811157 | MS.gene68707:CDS |
| AGGAGTTCGCAAATGTTGGA+GGG | 0.625466 | 2.3:+38811849 | MS.gene68707:CDS |
| TTCCCTCCTGTGAATAAGTG+AGG | 0.629123 | 2.3:-38810320 | None:intergenic |
| AATTGTGGAAGCTTTGAAGG+TGG | 0.629170 | 2.3:+38809315 | MS.gene68707:CDS |
| CATCACAAATAGCATTATCA+GGG | 0.630702 | 2.3:+38811700 | MS.gene68707:CDS |
| CCACCTCACTTATTCACAGG+AGG | 0.635060 | 2.3:+38810317 | MS.gene68707:CDS |
| AACAACATATATGAGCTAAG+AGG | 0.636409 | 2.3:+38811272 | MS.gene68707:CDS |
| GCCAAGAATAGAAGCACCGG+GGG | 0.641165 | 2.3:+38810259 | MS.gene68707:CDS |
| ACTTCATCATGCAAAGCAGG+TGG | 0.646109 | 2.3:-38810892 | None:intergenic |
| CACCTCACTTATTCACAGGA+GGG | 0.647323 | 2.3:+38810318 | MS.gene68707:CDS |
| CATGAAGTAAAGGAACGCGA+GGG | 0.652960 | 2.3:+38810512 | MS.gene68707:CDS |
| TTGGATCGGATAGCAAAGGA+TGG | 0.661274 | 2.3:+38810922 | MS.gene68707:CDS |
| CCTCCTGTGAATAAGTGAGG+TGG | 0.664327 | 2.3:-38810317 | None:intergenic |
| CTAAACGAATGATACATCTG+AGG | 0.664931 | 2.3:-38811966 | None:intergenic |
| TTGGATCCAACAAGACAACA+TGG | 0.676027 | 2.3:-38810370 | None:intergenic |
| GCTCGCGGACAAGAAGACGC+AGG | 0.689588 | 2.3:-38810996 | None:intergenic |
| ATGAAGTAAAGGAACGCGAG+GGG | 0.703697 | 2.3:+38810513 | MS.gene68707:CDS |
| CGCCAAGAATAGAAGCACCG+GGG | 0.710465 | 2.3:+38810258 | MS.gene68707:CDS |
| CAGAATGTGGGAGAACACTG+TGG | 0.727384 | 2.3:+38811169 | MS.gene68707:CDS |
| CTAGGCAGAGAAACGGACAA+GGG | 0.731036 | 2.3:+38811793 | MS.gene68707:CDS |
| TGGAGGGTGATGATATGCAG+AGG | 0.746794 | 2.3:+38811865 | MS.gene68707:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTACATCATAATGTTAA+GGG | - | chr2.3:38809792-38809811 | None:intergenic | 15.0% |
| !! | TAATTTACATCATAATGTTA+AGG | - | chr2.3:38809793-38809812 | None:intergenic | 15.0% |
| !! | TTAACATTATGATGTAAATT+AGG | + | chr2.3:38809792-38809811 | MS.gene68707:intron | 15.0% |
| !!! | AATTACTATTTATTTTCGAT+AGG | - | chr2.3:38809849-38809868 | None:intergenic | 15.0% |
| !!! | CTAAAATCTATGATTTTTTT+AGG | - | chr2.3:38809945-38809964 | None:intergenic | 15.0% |
| !! | ATACTCATGTATATAAATTG+CGG | - | chr2.3:38810174-38810193 | None:intergenic | 20.0% |
| !!! | AAAAATTGTCTGTTTTTCAT+AGG | - | chr2.3:38809975-38809994 | None:intergenic | 20.0% |
| !!! | AAAATTGTCTGTTTTTCATA+GGG | - | chr2.3:38809974-38809993 | None:intergenic | 20.0% |
| !!! | CAACAATTTTTTCAATATGA+AGG | + | chr2.3:38810811-38810830 | MS.gene68707:intron | 20.0% |
| !!! | TTTTTTTTAGCGTTTAATCA+CGG | + | chr2.3:38809431-38809450 | MS.gene68707:intron | 20.0% |
| ! | AAAATTAGCTCCTTCATTAA+TGG | - | chr2.3:38811901-38811920 | None:intergenic | 25.0% |
| ! | ATTCTTTGACTAATTCCAAA+AGG | + | chr2.3:38811514-38811533 | MS.gene68707:CDS | 25.0% |
| ! | ATTGGAGGTAATTATTATCA+TGG | + | chr2.3:38811762-38811781 | MS.gene68707:CDS | 25.0% |
| ! | CAACTAAAATGTATCAAAGA+CGG | - | chr2.3:38810224-38810243 | None:intergenic | 25.0% |
| ! | CATTATGATGTAAATTAGGA+TGG | + | chr2.3:38809796-38809815 | MS.gene68707:intron | 25.0% |
| ! | TAATAATTACCTCCAATTTC+AGG | - | chr2.3:38811759-38811778 | None:intergenic | 25.0% |
| ! | TGCTTGAATATTTCACAAAA+AGG | + | chr2.3:38809476-38809495 | MS.gene68707:intron | 25.0% |
| ! | TTACTTAAGACCATTAATGA+AGG | + | chr2.3:38811888-38811907 | MS.gene68707:CDS | 25.0% |
| ! | TTCTTTGACTAATTCCAAAA+GGG | + | chr2.3:38811515-38811534 | MS.gene68707:CDS | 25.0% |
| ! | TTGTGAAATATTCAAGCAAA+GGG | - | chr2.3:38809474-38809493 | None:intergenic | 25.0% |
| ! | TTTGTGAAATATTCAAGCAA+AGG | - | chr2.3:38809475-38809494 | None:intergenic | 25.0% |
| !! | ATTAATGAAGGAGCTAATTT+TGG | + | chr2.3:38811900-38811919 | MS.gene68707:CDS | 25.0% |
| !! | GAAAAAGGCATATGATAATT+GGG | + | chr2.3:38811458-38811477 | MS.gene68707:CDS | 25.0% |
| !! | TGAAAAAGGCATATGATAAT+TGG | + | chr2.3:38811457-38811476 | MS.gene68707:CDS | 25.0% |
| !!! | CTCTAATCATATTTTTTCGA+AGG | + | chr2.3:38811082-38811101 | MS.gene68707:intron | 25.0% |
| !!! | TTGCAAATGTTGATTTTGTT+CGG | - | chr2.3:38811634-38811653 | None:intergenic | 25.0% |
| AAATTAGACCATGCTAAACT+GGG | + | chr2.3:38809633-38809652 | MS.gene68707:CDS | 30.0% | |
| AACAACATATATGAGCTAAG+AGG | + | chr2.3:38811272-38811291 | MS.gene68707:CDS | 30.0% | |
| ACATCACAAATAGCATTATC+AGG | + | chr2.3:38811699-38811718 | MS.gene68707:CDS | 30.0% | |
| ACCATGAATTACAATATGTC+AGG | + | chr2.3:38811723-38811742 | MS.gene68707:CDS | 30.0% | |
| ATATAGTAGAGTAAGAACGA+AGG | + | chr2.3:38810788-38810807 | MS.gene68707:intron | 30.0% | |
| ATCACTCACTTCAAATCAAA+AGG | + | chr2.3:38811328-38811347 | MS.gene68707:CDS | 30.0% | |
| CATCACAAATAGCATTATCA+GGG | + | chr2.3:38811700-38811719 | MS.gene68707:CDS | 30.0% | |
| CTTACACTTCTTAATTTCTG+TGG | - | chr2.3:38811021-38811040 | None:intergenic | 30.0% | |
| GATAATAATCCTGAAATTGG+AGG | + | chr2.3:38811747-38811766 | MS.gene68707:CDS | 30.0% | |
| GGAGATAATAATCCTGAAAT+TGG | + | chr2.3:38811744-38811763 | MS.gene68707:CDS | 30.0% | |
| GGTTATCAAATCAAAGAACA+TGG | + | chr2.3:38809497-38809516 | MS.gene68707:intron | 30.0% | |
| GTAATTATTATCATGGAGAC+TGG | + | chr2.3:38811769-38811788 | MS.gene68707:CDS | 30.0% | |
| TAACACCAAGTCTAAACTTT+CGG | - | chr2.3:38810640-38810659 | None:intergenic | 30.0% | |
| TCAATATGAAGGCTATATTG+AGG | + | chr2.3:38810822-38810841 | MS.gene68707:intron | 30.0% | |
| TCAGAATTCTAATCTGACTA+GGG | - | chr2.3:38809672-38809691 | None:intergenic | 30.0% | |
| TCCTGACATATTGTAATTCA+TGG | - | chr2.3:38811727-38811746 | None:intergenic | 30.0% | |
| TCTATGATCTTTAACAGCAA+AGG | - | chr2.3:38810717-38810736 | None:intergenic | 30.0% | |
| TCTTATCCAGCTAGAATTAT+CGG | - | chr2.3:38810615-38810634 | None:intergenic | 30.0% | |
| TCTTTGACTAATTCCAAAAG+GGG | + | chr2.3:38811516-38811535 | MS.gene68707:CDS | 30.0% | |
| TTAAGCTTAAAGCAGCTTTA+AGG | + | chr2.3:38812033-38812052 | MS.gene68707:CDS | 30.0% | |
| TTCAGAATTCTAATCTGACT+AGG | - | chr2.3:38809673-38809692 | None:intergenic | 30.0% | |
| ! | AGATTTGCAAGTTAGTCTAA+AGG | + | chr2.3:38810556-38810575 | MS.gene68707:CDS | 30.0% |
| ! | GTGATTCTAAAGAAAAGAAC+TGG | - | chr2.3:38811313-38811332 | None:intergenic | 30.0% |
| !! | AAAGTTTAGACTTGGTGTTA+AGG | + | chr2.3:38810640-38810659 | MS.gene68707:CDS | 30.0% |
| !! | ATGAGGAAATTGATGATGAT+TGG | + | chr2.3:38810468-38810487 | MS.gene68707:CDS | 30.0% |
| !! | TTTGCTGTTAAAGATCATAG+AGG | + | chr2.3:38810716-38810735 | MS.gene68707:CDS | 30.0% |
| AAGTACCTGTATTGAAAAGG+TGG | - | chr2.3:38811132-38811151 | None:intergenic | 35.0% | |
| ACCAAGTACCTGTATTGAAA+AGG | - | chr2.3:38811135-38811154 | None:intergenic | 35.0% | |
| AGTTAATCCTTCTAATTCCG+TGG | + | chr2.3:38809573-38809592 | MS.gene68707:intron | 35.0% | |
| ATGAAGTTTGGAGATTGGAT+CGG | + | chr2.3:38810908-38810927 | MS.gene68707:CDS | 35.0% | |
| ATGATTAGAGAAGAGTGATG+TGG | - | chr2.3:38811072-38811091 | None:intergenic | 35.0% | |
| CTAAACGAATGATACATCTG+AGG | - | chr2.3:38811969-38811988 | None:intergenic | 35.0% | |
| CTCCATCATATTCTATGACT+TGG | - | chr2.3:38811485-38811504 | None:intergenic | 35.0% | |
| GAAATTAGACCATGCTAAAC+TGG | + | chr2.3:38809632-38809651 | MS.gene68707:CDS | 35.0% | |
| GAATAACTACTCATCCAGTT+CGG | + | chr2.3:38811659-38811678 | MS.gene68707:CDS | 35.0% | |
| GACCAAGTCATAGAATATGA+TGG | + | chr2.3:38811480-38811499 | MS.gene68707:CDS | 35.0% | |
| TCTCAACCACCTAAAATTTC+AGG | + | chr2.3:38810196-38810215 | MS.gene68707:intron | 35.0% | |
| TGGAATGTCAAACAGAATGT+GGG | + | chr2.3:38811157-38811176 | MS.gene68707:CDS | 35.0% | |
| TGTAGATTCCTTGGTGAAAA+AGG | + | chr2.3:38811443-38811462 | MS.gene68707:CDS | 35.0% | |
| TGTGTTGAAAACTTGACAGA+AGG | - | chr2.3:38810032-38810051 | None:intergenic | 35.0% | |
| ! | AAGACGGATCCTGAAATTTT+AGG | - | chr2.3:38810208-38810227 | None:intergenic | 35.0% |
| ! | ACCTTTTCAATACAGGTACT+TGG | + | chr2.3:38811131-38811150 | MS.gene68707:intron | 35.0% |
| ! | CTTTGAAAGCCATGAAGTAA+AGG | + | chr2.3:38810502-38810521 | MS.gene68707:CDS | 35.0% |
| ! | TAAGTTGAATGTTGTTGTGC+TGG | + | chr2.3:38810433-38810452 | MS.gene68707:CDS | 35.0% |
| ! | TGTAATTGTGGAAGCTTTGA+AGG | + | chr2.3:38809312-38809331 | MS.gene68707:CDS | 35.0% |
| ! | TTCAACTTAGCAACTGATTC+TGG | - | chr2.3:38810422-38810441 | None:intergenic | 35.0% |
| ! | TTGCAAGTTAGTCTAAAGGA+AGG | + | chr2.3:38810560-38810579 | MS.gene68707:CDS | 35.0% |
| !! | ATCATATGCCTTTTTCACCA+AGG | - | chr2.3:38811454-38811473 | None:intergenic | 35.0% |
| !! | CTCACAATTTTTCTGAGAAG+AGG | - | chr2.3:38809373-38809392 | None:intergenic | 35.0% |
| !! | GTGGCATTCTTGTTCTAAAA+TGG | - | chr2.3:38810301-38810320 | None:intergenic | 35.0% |
| !!! | TGATACATTTTAGTTGTGCC+AGG | + | chr2.3:38810228-38810247 | MS.gene68707:intron | 35.0% |
| AAGACGCAGGAAATCTTCTA+CGG | - | chr2.3:38810986-38811005 | None:intergenic | 40.0% | |
| AAGGAAGGAGTAGGAACATT+AGG | + | chr2.3:38810575-38810594 | MS.gene68707:CDS | 40.0% | |
| ACATTGTCGCAGAAGAACTT+CGG | + | chr2.3:38811823-38811842 | MS.gene68707:CDS | 40.0% | |
| ACTGATGAAACTCATAGCAC+TGG | + | chr2.3:38811239-38811258 | MS.gene68707:CDS | 40.0% | |
| AGAAGCCGAAAGTTTAGACT+TGG | + | chr2.3:38810632-38810651 | MS.gene68707:CDS | 40.0% | |
| AGTGATCCATGTTGTCTTGT+TGG | + | chr2.3:38810364-38810383 | MS.gene68707:CDS | 40.0% | |
| AGTTCGGATTATCAGATGGT+AGG | + | chr2.3:38811675-38811694 | MS.gene68707:CDS | 40.0% | |
| ATCCAGTTCGGATTATCAGA+TGG | + | chr2.3:38811671-38811690 | MS.gene68707:CDS | 40.0% | |
| CAAACTTCATCATGCAAAGC+AGG | - | chr2.3:38810898-38810917 | None:intergenic | 40.0% | |
| CATGCTAAGACATGTGTGTT+GGG | + | chr2.3:38811194-38811213 | MS.gene68707:CDS | 40.0% | |
| CTGCTTTGCATGATGAAGTT+TGG | + | chr2.3:38810896-38810915 | MS.gene68707:CDS | 40.0% | |
| CTTACAGGTAAGTGAAGAAG+TGG | + | chr2.3:38809596-38809615 | MS.gene68707:intron | 40.0% | |
| CTTTCACCGATAATTCTAGC+TGG | + | chr2.3:38810606-38810625 | MS.gene68707:CDS | 40.0% | |
| GATGTATCATTCGTTTAGCG+AGG | + | chr2.3:38811971-38811990 | MS.gene68707:CDS | 40.0% | |
| GCATGATGAAGTTTGGAGAT+TGG | + | chr2.3:38810903-38810922 | MS.gene68707:CDS | 40.0% | |
| GTGGAATGTCAAACAGAATG+TGG | + | chr2.3:38811156-38811175 | MS.gene68707:CDS | 40.0% | |
| GTGTTACACTGAAGAACGTA+AGG | + | chr2.3:38810100-38810119 | MS.gene68707:intron | 40.0% | |
| GTTCGGATTATCAGATGGTA+GGG | + | chr2.3:38811676-38811695 | MS.gene68707:CDS | 40.0% | |
| TACCATCTGATAATCCGAAC+TGG | - | chr2.3:38811676-38811695 | None:intergenic | 40.0% | |
| TATTGCGTACATTCATCCAC+AGG | - | chr2.3:38809895-38809914 | None:intergenic | 40.0% | |
| TCAATACAGGTACTTGGTAG+TGG | + | chr2.3:38811137-38811156 | MS.gene68707:intron | 40.0% | |
| TGCAAATCTCCAGTTAGAAG+TGG | - | chr2.3:38810545-38810564 | None:intergenic | 40.0% | |
| TTAGAGAAGAGTGATGTGGA+TGG | - | chr2.3:38811068-38811087 | None:intergenic | 40.0% | |
| TTCTTAATTTCTGTGGCTCG+CGG | - | chr2.3:38811014-38811033 | None:intergenic | 40.0% | |
| TTGAATGTTGTTGTGCTGGA+AGG | + | chr2.3:38810437-38810456 | MS.gene68707:CDS | 40.0% | |
| TTGGATCCAACAAGACAACA+TGG | - | chr2.3:38810373-38810392 | None:intergenic | 40.0% | |
| ! | ACGGATCCTGAAATTTTAGG+TGG | - | chr2.3:38810205-38810224 | None:intergenic | 40.0% |
| ! | GTTAGTCTAAAGGAAGGAGT+AGG | + | chr2.3:38810566-38810585 | MS.gene68707:CDS | 40.0% |
| ! | GTTTGCCACCTTTTCAATAC+AGG | + | chr2.3:38811124-38811143 | MS.gene68707:intron | 40.0% |
| ! | TGTCTTGTTGGATCCAAACA+CGG | + | chr2.3:38810376-38810395 | MS.gene68707:CDS | 40.0% |
| !! | AATTGTGGAAGCTTTGAAGG+TGG | + | chr2.3:38809315-38809334 | MS.gene68707:CDS | 40.0% |
| !! | AGCTTAAAGCAGCTTTAAGG+TGG | + | chr2.3:38812036-38812055 | MS.gene68707:CDS | 40.0% |
| !! | ATTATCATGGAGACTGGTCT+AGG | + | chr2.3:38811775-38811794 | MS.gene68707:CDS | 40.0% |
| !! | CTTAAAGCAGCTTTAAGGTG+GGG | + | chr2.3:38812038-38812057 | MS.gene68707:CDS | 40.0% |
| !! | GCTGGAAGGTGATTTTAATG+AGG | + | chr2.3:38810451-38810470 | MS.gene68707:CDS | 40.0% |
| !! | GCTTAAAGCAGCTTTAAGGT+GGG | + | chr2.3:38812037-38812056 | MS.gene68707:CDS | 40.0% |
| !! | GTTTAGACTTGGTGTTAAGG+TGG | + | chr2.3:38810643-38810662 | MS.gene68707:CDS | 40.0% |
| !!! | TACTGATTTCGATCCCCTTT+TGG | - | chr2.3:38811532-38811551 | None:intergenic | 40.0% |
| ACAGAAGGACTAACGTGTCT+CGG | - | chr2.3:38810017-38810036 | None:intergenic | 45.0% | |
| ACGGGAAACGTTGTTCAAGT+TGG | + | chr2.3:38810395-38810414 | MS.gene68707:CDS | 45.0% | |
| ACGTTCTTCAGTGTAACACG+TGG | - | chr2.3:38810099-38810118 | None:intergenic | 45.0% | |
| ACTTCATCATGCAAAGCAGG+TGG | - | chr2.3:38810895-38810914 | None:intergenic | 45.0% | |
| AGGAGTTCGCAAATGTTGGA+GGG | + | chr2.3:38811849-38811868 | MS.gene68707:CDS | 45.0% | |
| AGTATGCATCTGCAAAGGGA+AGG | + | chr2.3:38811592-38811611 | MS.gene68707:CDS | 45.0% | |
| ATGAAGTAAAGGAACGCGAG+GGG | + | chr2.3:38810513-38810532 | MS.gene68707:CDS | 45.0% | |
| ATGCCACCTCACTTATTCAC+AGG | + | chr2.3:38810314-38810333 | MS.gene68707:CDS | 45.0% | |
| CACCTCACTTATTCACAGGA+GGG | + | chr2.3:38810318-38810337 | MS.gene68707:CDS | 45.0% | |
| CAGCAGTATGCATCTGCAAA+GGG | + | chr2.3:38811588-38811607 | MS.gene68707:CDS | 45.0% | |
| CATGAAGTAAAGGAACGCGA+GGG | + | chr2.3:38810512-38810531 | MS.gene68707:CDS | 45.0% | |
| CTAAGAGGTCTCATTGCTGA+TGG | + | chr2.3:38811287-38811306 | MS.gene68707:CDS | 45.0% | |
| CTGTAAGCCACGGAATTAGA+AGG | - | chr2.3:38809583-38809602 | None:intergenic | 45.0% | |
| CTTCACTTACCTGTAAGCCA+CGG | - | chr2.3:38809593-38809612 | None:intergenic | 45.0% | |
| CTTCTAATTCCGTGGCTTAC+AGG | + | chr2.3:38809581-38809600 | MS.gene68707:intron | 45.0% | |
| GAGATTGGATCGGATAGCAA+AGG | + | chr2.3:38810918-38810937 | MS.gene68707:CDS | 45.0% | |
| GAGGATAATGTCAAGTGCTC+AGG | + | chr2.3:38811990-38812009 | MS.gene68707:CDS | 45.0% | |
| GCAAAGACTCTGCTCATCTT+TGG | + | chr2.3:38809345-38809364 | MS.gene68707:CDS | 45.0% | |
| GCAGATGTCTGTAGATTCCT+TGG | + | chr2.3:38811434-38811453 | MS.gene68707:intron | 45.0% | |
| GCATGCTAAGACATGTGTGT+TGG | + | chr2.3:38811193-38811212 | MS.gene68707:CDS | 45.0% | |
| GCTTAGGAGTTCGCAAATGT+TGG | + | chr2.3:38811845-38811864 | MS.gene68707:CDS | 45.0% | |
| GTATGCATCTGCAAAGGGAA+GGG | + | chr2.3:38811593-38811612 | MS.gene68707:CDS | 45.0% | |
| GTTAGACATGATGTCACCTG+TGG | + | chr2.3:38809876-38809895 | MS.gene68707:intron | 45.0% | |
| TAATGTCAAGTGCTCAGGCA+AGG | + | chr2.3:38811995-38812014 | MS.gene68707:CDS | 45.0% | |
| TAGGAGTTCGCAAATGTTGG+AGG | + | chr2.3:38811848-38811867 | MS.gene68707:CDS | 45.0% | |
| TCACTTATTCACAGGAGGGA+AGG | + | chr2.3:38810322-38810341 | MS.gene68707:CDS | 45.0% | |
| TGAACAACGTTTCCCGTGTT+TGG | - | chr2.3:38810392-38810411 | None:intergenic | 45.0% | |
| TTCCCTCCTGTGAATAAGTG+AGG | - | chr2.3:38810323-38810342 | None:intergenic | 45.0% | |
| TTGGATCGGATAGCAAAGGA+TGG | + | chr2.3:38810922-38810941 | MS.gene68707:CDS | 45.0% | |
| ! | GTCTTGTTGGATCCAAACAC+GGG | + | chr2.3:38810377-38810396 | MS.gene68707:CDS | 45.0% |
| ACCATGCTAAACTGGGTGAC+AGG | + | chr2.3:38809640-38809659 | MS.gene68707:CDS | 50.0% | |
| ACCTGTCACCCAGTTTAGCA+TGG | - | chr2.3:38809644-38809663 | None:intergenic | 50.0% | |
| ATTCACAGGAGGGAAGGTTG+AGG | + | chr2.3:38810328-38810347 | MS.gene68707:CDS | 50.0% | |
| CAGAATGTGGGAGAACACTG+TGG | + | chr2.3:38811169-38811188 | MS.gene68707:CDS | 50.0% | |
| CAGATGCATACTGCTGCTCT+TGG | - | chr2.3:38811584-38811603 | None:intergenic | 50.0% | |
| CCACCTCACTTATTCACAGG+AGG | + | chr2.3:38810317-38810336 | MS.gene68707:CDS | 50.0% | |
| CCATGAAGTAAAGGAACGCG+AGG | + | chr2.3:38810511-38810530 | MS.gene68707:CDS | 50.0% | |
| CCTCCTGTGAATAAGTGAGG+TGG | - | chr2.3:38810320-38810339 | None:intergenic | 50.0% | |
| CCTCGCGTTCCTTTACTTCA+TGG | - | chr2.3:38810514-38810533 | None:intergenic | 50.0% | |
| CGAATCCCGTCACAATATCC+AGG | - | chr2.3:38810671-38810690 | None:intergenic | 50.0% | |
| CTAGGCAGAGAAACGGACAA+GGG | + | chr2.3:38811793-38811812 | MS.gene68707:CDS | 50.0% | |
| GCAGCAGTATGCATCTGCAA+AGG | + | chr2.3:38811587-38811606 | MS.gene68707:CDS | 50.0% | |
| GGGAAAAGGCCACTTCTAAC+TGG | + | chr2.3:38810533-38810552 | MS.gene68707:CDS | 50.0% | |
| GTGGCTCCTGGATATTGTGA+CGG | + | chr2.3:38810662-38810681 | MS.gene68707:CDS | 50.0% | |
| TAAAGGAACGCGAGGGGAAA+AGG | + | chr2.3:38810519-38810538 | MS.gene68707:CDS | 50.0% | |
| TATTCTTGGCGGTGAAGACC+TGG | - | chr2.3:38810249-38810268 | None:intergenic | 50.0% | |
| TCGCAGAAGAACTTCGGCTT+AGG | + | chr2.3:38811829-38811848 | MS.gene68707:CDS | 50.0% | |
| TCTAGGCAGAGAAACGGACA+AGG | + | chr2.3:38811792-38811811 | MS.gene68707:CDS | 50.0% | |
| TGAAGAAGTGGAGCGTGCTT+TGG | + | chr2.3:38809608-38809627 | MS.gene68707:CDS | 50.0% | |
| TGGAGGGTGATGATATGCAG+AGG | + | chr2.3:38811865-38811884 | MS.gene68707:CDS | 50.0% | |
| TGGCTCCTGGATATTGTGAC+GGG | + | chr2.3:38810663-38810682 | MS.gene68707:CDS | 50.0% | |
| TTCACAGGAGGGAAGGTTGA+GGG | + | chr2.3:38810329-38810348 | MS.gene68707:CDS | 50.0% | |
| ! | ACCGCCAAGAATAGAAGCAC+CGG | + | chr2.3:38810256-38810275 | MS.gene68707:CDS | 50.0% |
| ! | AGCTGCAGATTCTTTTCCCC+CGG | - | chr2.3:38810278-38810297 | None:intergenic | 50.0% |
| !! | GACTGGTCTAGGCAGAGAAA+CGG | + | chr2.3:38811786-38811805 | MS.gene68707:CDS | 50.0% |
| CCCGGTGCTTCTATTCTTGG+CGG | - | chr2.3:38810260-38810279 | None:intergenic | 55.0% | |
| GCTCAGGCAAGGCTGTTGTT+GGG | + | chr2.3:38812006-38812025 | MS.gene68707:CDS | 55.0% | |
| TCCCCCGGTGCTTCTATTCT+TGG | - | chr2.3:38810263-38810282 | None:intergenic | 55.0% | |
| TGCTCAGGCAAGGCTGTTGT+TGG | + | chr2.3:38812005-38812024 | MS.gene68707:CDS | 55.0% | |
| !! | CCGCCAAGAATAGAAGCACC+GGG | + | chr2.3:38810257-38810276 | MS.gene68707:CDS | 55.0% |
| !! | CGCCAAGAATAGAAGCACCG+GGG | + | chr2.3:38810258-38810277 | MS.gene68707:CDS | 55.0% |
| !! | CTTGGTGTTAAGGTGGCTCC+TGG | + | chr2.3:38810650-38810669 | MS.gene68707:CDS | 55.0% |
| !! | GCCAAGAATAGAAGCACCGG+GGG | + | chr2.3:38810259-38810278 | MS.gene68707:CDS | 55.0% |
| CAGGCAAGGCTGTTGTTGGG+TGG | + | chr2.3:38812009-38812028 | MS.gene68707:CDS | 60.0% | |
| GACGGGATTCGAGTGCGTGA+GGG | + | chr2.3:38810680-38810699 | MS.gene68707:CDS | 60.0% | |
| GGGAAGGTTGAGGGAGAGCA+AGG | + | chr2.3:38810338-38810357 | MS.gene68707:CDS | 60.0% | |
| TGACGGGATTCGAGTGCGTG+AGG | + | chr2.3:38810679-38810698 | MS.gene68707:CDS | 60.0% | |
| GCTCGCGGACAAGAAGACGC+AGG | - | chr2.3:38810999-38811018 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 38809304 | 38812118 | 38809304 | ID=MS.gene68707 |
| chr2.3 | mRNA | 38809304 | 38812118 | 38809304 | ID=MS.gene68707.t1;Parent=MS.gene68707 |
| chr2.3 | exon | 38809304 | 38809387 | 38809304 | ID=MS.gene68707.t1.exon1;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38809304 | 38809387 | 38809304 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| chr2.3 | exon | 38809603 | 38809661 | 38809603 | ID=MS.gene68707.t1.exon2;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38809603 | 38809661 | 38809603 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| chr2.3 | exon | 38810250 | 38810743 | 38810250 | ID=MS.gene68707.t1.exon3;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38810250 | 38810743 | 38810250 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| chr2.3 | exon | 38810875 | 38811035 | 38810875 | ID=MS.gene68707.t1.exon4;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38810875 | 38811035 | 38810875 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| chr2.3 | exon | 38811146 | 38811349 | 38811146 | ID=MS.gene68707.t1.exon5;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38811146 | 38811349 | 38811146 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| chr2.3 | exon | 38811438 | 38812118 | 38811438 | ID=MS.gene68707.t1.exon6;Parent=MS.gene68707.t1 |
| chr2.3 | CDS | 38811438 | 38812118 | 38811438 | ID=cds.MS.gene68707.t1;Parent=MS.gene68707.t1 |
| Gene Sequence |
| Protein sequence |
