AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036559

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036559.t1 MTR_4g118350 96.175 549 21 0 12 560 76 624 0.0 1103
MS.gene036559.t1 MTR_4g118355 97.627 295 7 0 590 884 1 295 0.0 592
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036559.t1 AT4G15530 80.686 875 168 1 10 884 89 962 0.0 1505
MS.gene036559.t1 AT4G15530 80.686 875 168 1 10 884 89 962 0.0 1505
MS.gene036559.t1 AT4G15530 80.686 875 168 1 10 884 82 955 0.0 1504
MS.gene036559.t1 AT4G15530 80.686 875 168 1 10 884 82 955 0.0 1504
MS.gene036559.t1 AT4G15530 80.756 873 167 1 12 884 3 874 0.0 1503
MS.gene036559.t1 AT4G15530 80.747 857 164 1 28 884 1 856 0.0 1472
MS.gene036559.t1 AT4G15530 80.747 857 164 1 28 884 1 856 0.0 1472

Find 211 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTATGGTGTTTGGTAATA+TGG 0.097141 8.3:-8138180 MS.gene036559:CDS
GCTAATTCTAGTTGCTTCTT+TGG 0.182850 8.3:+8138302 None:intergenic
GAGATAATGGTTCCACTTAT+TGG 0.193804 8.3:-8135531 MS.gene036559:CDS
TTAGTTGACCCACACCTTTC+TGG 0.196958 8.3:+8134663 None:intergenic
ACAAGGAAAGAGTGCAATTT+TGG 0.237894 8.3:-8137169 MS.gene036559:intron
TGATGATAGGTGGTTGTAAT+TGG 0.242997 8.3:-8136657 MS.gene036559:intron
TGTTAAGTTACCTTCAAATT+TGG 0.245919 8.3:+8134605 None:intergenic
CGAAACATTAATCAGATAAC+TGG 0.274659 8.3:-8138230 MS.gene036559:CDS
ACTTTGTTCTTGTACTTAGA+TGG 0.277004 8.3:+8137276 None:intergenic
ACTGGTGAAAAGAAACTTTA+TGG 0.279457 8.3:-8138113 MS.gene036559:CDS
GACATCAAGTGAGTTTAATA+AGG 0.284688 8.3:-8135297 MS.gene036559:CDS
GGTGGTTGTAATTGGGGATA+TGG 0.285414 8.3:-8136649 MS.gene036559:CDS
CTAGCTGTTATTGCATCTTC+AGG 0.294021 8.3:+8136367 None:intergenic
TAATCAGATAACTGGGCTAA+TGG 0.301146 8.3:-8138222 MS.gene036559:CDS
TTCATGGTCTCTAGAACTTC+AGG 0.305422 8.3:+8137915 None:intergenic
TCCGGCATTAAGCGAGGATT+TGG 0.306858 8.3:-8136550 MS.gene036559:CDS
AGACTCGTTTACTTCAATAT+TGG 0.307162 8.3:+8136764 None:intergenic
TTGCATGCCAGATGCTTATA+AGG 0.310466 8.3:-8137889 MS.gene036559:CDS
TACTGTAGCCAAATGTCATT+TGG 0.311417 8.3:+8134994 None:intergenic
GCCTGCATCTCAGTCAATTC+TGG 0.316425 8.3:+8135612 None:intergenic
ATGTCTCGTGTTCTCCGTTC+AGG 0.319494 8.3:-8134415 MS.gene036559:intron
CTTCCTTCATACCTTTCTGC+TGG 0.323308 8.3:-8134951 MS.gene036559:CDS
ATGGACACAGTTCTTAATCT+TGG 0.333394 8.3:-8138851 MS.gene036559:CDS
TGCTGTGAATATTCAATCTA+TGG 0.335352 8.3:-8138195 MS.gene036559:CDS
GGTAATATGGGAAATACTTC+AGG 0.336156 8.3:-8138167 MS.gene036559:CDS
TCTAACAATCGGATTGTTAC+TGG 0.337483 8.3:+8135958 None:intergenic
GGGAGCAAACTTGGCAGAAA+TGG 0.342906 8.3:-8140047 MS.gene036559:CDS
CACAAGGAATTGGACTTTGC+AGG 0.346976 8.3:-8136333 MS.gene036559:CDS
TGTCTTGGGCTGATCAAATA+AGG 0.349941 8.3:-8136518 MS.gene036559:CDS
ACTGGTTTGCCTGCATCCCC+TGG 0.352559 8.3:-8137246 MS.gene036559:CDS
GGGTTCTTCTCTAAGCTATA+AGG 0.352742 8.3:-8135245 MS.gene036559:CDS
CCCTGGAGCTGCGGTTGGGC+AGG 0.353098 8.3:-8137229 MS.gene036559:CDS
AGACGTTTCTTAGACATGTT+TGG 0.353523 8.3:-8138761 MS.gene036559:CDS
ATTTGGAAACTTTCATGTCT+TGG 0.365782 8.3:-8136533 MS.gene036559:CDS
AGAAATGGTGCACAAGGAAT+TGG 0.365998 8.3:-8136343 MS.gene036559:CDS
TTTGGAAACTTTCATGTCTT+GGG 0.370890 8.3:-8136532 MS.gene036559:CDS
AGACAAGTCCAGAGGACATT+GGG 0.372968 8.3:-8136890 MS.gene036559:CDS
GCATCCCCTGGAGCTGCGGT+TGG 0.374079 8.3:-8137234 MS.gene036559:CDS
TCAAAATCTGATTGTTGATA+AGG 0.379114 8.3:+8136009 None:intergenic
TGTAGTTCTACCAGAGATAA+TGG 0.383769 8.3:-8135544 MS.gene036559:CDS
GACCTTACCCAAATGACATT+TGG 0.388729 8.3:-8135002 MS.gene036559:CDS
GATGATAGGTGGTTGTAATT+GGG 0.390892 8.3:-8136656 MS.gene036559:intron
TAACAGCGGGTGTTCACCTT+TGG 0.392290 8.3:-8140304 MS.gene036559:intron
TGTCATTTGGGTAAGGTCAT+TGG 0.393525 8.3:+8135007 None:intergenic
ATGGTGGCTGTTTATGATTC+TGG 0.394333 8.3:-8140624 MS.gene036559:CDS
TGGGGAAAGTGTTGCGTGTC+TGG 0.401337 8.3:-8136792 MS.gene036559:CDS
AAGATGTAGTTGCTGGAATC+AGG 0.402459 8.3:-8137941 MS.gene036559:CDS
TTGGCAGAAATGGCAACAAT+TGG 0.404140 8.3:-8140037 MS.gene036559:CDS
TTTCCTCTGTTCTTGCGTAA+TGG 0.410992 8.3:+8136053 None:intergenic
TTGATATTCTCGACATGCTT+CGG 0.411636 8.3:+8139982 None:intergenic
GCAATAACAGCTAGAAGAAA+TGG 0.412787 8.3:-8136358 MS.gene036559:CDS
ACATGTGCCAAGTCACCTTC+AGG 0.414462 8.3:+8135913 None:intergenic
AATCAGATAACTGGGCTAAT+GGG 0.414551 8.3:-8138221 MS.gene036559:CDS
ACCTGCCCAACCGCAGCTCC+AGG 0.415042 8.3:+8137228 None:intergenic
ATTGCATTCTTTGCTCAACT+TGG 0.423442 8.3:-8134446 MS.gene036559:CDS
CATCCCCTGGAGCTGCGGTT+GGG 0.424425 8.3:-8137233 MS.gene036559:CDS
TTCCTTCATACCTTTCTGCT+GGG 0.426273 8.3:-8134950 MS.gene036559:CDS
TCCACCGGTGAGGTGATTCT+AGG 0.427238 8.3:-8136591 MS.gene036559:CDS
TTTCGATACTTAATAGCCCT+TGG 0.429413 8.3:+8138248 None:intergenic
TTGAATGATGAAGTGGTTGC+TGG 0.429675 8.3:-8138827 MS.gene036559:CDS
AATCAAAATGTGCACAGAAA+AGG 0.430403 8.3:-8134642 MS.gene036559:CDS
ATCTCCTCCCACAAACCATT+TGG 0.430655 8.3:+8139941 None:intergenic
TCCTTGTGCATGCCATTCCT+CGG 0.432091 8.3:+8137185 None:intergenic
TACTGCTAAACCAAATTTGA+AGG 0.436038 8.3:-8134615 MS.gene036559:intron
TCTATGGTGTTTGGTAATAT+GGG 0.436697 8.3:-8138179 MS.gene036559:CDS
TAGGGAGAAGATGTAGTTGC+TGG 0.436970 8.3:-8137948 MS.gene036559:CDS
GATTTCCATGCCTGGAATGA+TGG 0.438634 8.3:-8138870 MS.gene036559:CDS
GGGAGGAAAGGGAGCAAACT+TGG 0.438786 8.3:-8140056 MS.gene036559:CDS
ATCAAAATGTGCACAGAAAA+GGG 0.440025 8.3:-8134641 MS.gene036559:CDS
TCAAGTTCCTTATAAGCATC+TGG 0.440088 8.3:+8137882 None:intergenic
ATGGGAAATACTTCAGGAAC+TGG 0.442975 8.3:-8138161 MS.gene036559:CDS
CTCCTTGTCTCTGTTCGCTC+TGG 0.446899 8.3:-8139854 MS.gene036559:CDS
ACCGCAGCTCCAGGGGATGC+AGG 0.446945 8.3:+8137237 None:intergenic
TTATGTGTAGTTGGGAGGAA+AGG 0.450313 8.3:-8140068 MS.gene036559:intron
TGCTTCAGATGAAAGGCTAA+AGG 0.456051 8.3:-8136097 MS.gene036559:CDS
CATTCCACACTCATTGTTTG+AGG 0.458241 8.3:-8138555 MS.gene036559:CDS
TGATGAAGTGGTTGCTGGGT+TGG 0.459454 8.3:-8138822 MS.gene036559:CDS
GGCTGTGAGAAGGATGATAA+TGG 0.461097 8.3:-8136076 MS.gene036559:CDS
TGAGAAAGTGTTCTCTGAGA+TGG 0.461591 8.3:-8135266 MS.gene036559:CDS
CTTCATGAATTTCTTCCTGA+AGG 0.463137 8.3:-8135928 MS.gene036559:CDS
GAATGTCTATGTTGAAGCTA+AGG 0.464580 8.3:-8138441 MS.gene036559:CDS
AATATTCAATCTATGGTGTT+TGG 0.464716 8.3:-8138188 MS.gene036559:CDS
ACTGTAGCCAAATGTCATTT+GGG 0.469166 8.3:+8134995 None:intergenic
CTGCTGTTGTAGCTCGTGGA+TGG 0.470770 8.3:-8136812 MS.gene036559:CDS
TCTGAGGTTAATCCCATGCT+TGG 0.472369 8.3:-8135823 MS.gene036559:CDS
TGCTGTTGTAGCTCGTGGAT+GGG 0.472949 8.3:-8136811 MS.gene036559:CDS
ATTTCTTCCTGAAGGTGACT+TGG 0.473967 8.3:-8135920 MS.gene036559:CDS
ATCTATCAGATTTCCATGCC+TGG 0.475192 8.3:-8138878 MS.gene036559:intron
TGGATGTTGCAATGTCGAAT+TGG 0.477597 8.3:-8137687 MS.gene036559:CDS
AGAACTGTGTCCATCATTCC+AGG 0.483639 8.3:+8138860 None:intergenic
TCCAGAATTGACTGAGATGC+AGG 0.485250 8.3:-8135613 MS.gene036559:CDS
ATTGGAAAGCGTACTGGTAA+AGG 0.485922 8.3:-8137669 MS.gene036559:CDS
TCCAAATCCTCGCTTAATGC+CGG 0.488847 8.3:+8136549 None:intergenic
TATGTGTAGTTGGGAGGAAA+GGG 0.490148 8.3:-8140067 MS.gene036559:intron
TTGTGGGAGGAGATACTTGA+AGG 0.490236 8.3:-8139932 MS.gene036559:CDS
GCTGCCGCAAGCCTAGCAAT+TGG 0.491619 8.3:+8134305 None:intergenic
GAAAAGCTAAAGCAATCAAA+AGG 0.493897 8.3:-8138524 MS.gene036559:CDS
ATTGGATTATCTGTGCCTCC+TGG 0.497182 8.3:-8140019 MS.gene036559:CDS
TCAACTCTTGGGATAGTCCA+AGG 0.500415 8.3:-8138265 MS.gene036559:CDS
ATAAGTGGAACCATTATCTC+TGG 0.504023 8.3:+8135534 None:intergenic
CTGCCCAACCGCAGCTCCAG+GGG 0.505966 8.3:+8137230 None:intergenic
TCAGCAACTAGTGCAGCTCT+TGG 0.509292 8.3:+8135202 None:intergenic
AAAGCAAGCACTTTCTCCTC+CGG 0.510730 8.3:-8136568 MS.gene036559:CDS
TGGTAATATCAGAAGGAGAA+TGG 0.511559 8.3:-8136629 MS.gene036559:CDS
TGTCGAATTGGAAAGCGTAC+TGG 0.513357 8.3:-8137675 MS.gene036559:CDS
TTTGCAGGATTCCAATTGCT+AGG 0.514085 8.3:-8134316 MS.gene036559:intron
GCCTGCATCCCCTGGAGCTG+CGG 0.515502 8.3:-8137238 MS.gene036559:CDS
AGAGTTTCTCACTAATGCTC+AGG 0.517854 8.3:-8138090 MS.gene036559:intron
TGAATGATGAAGTGGTTGCT+GGG 0.521032 8.3:-8138826 MS.gene036559:CDS
CCTGCCCAACCGCAGCTCCA+GGG 0.522388 8.3:+8137229 None:intergenic
AAACAAAGCAATGAAGTCCT+TGG 0.522922 8.3:-8140263 MS.gene036559:intron
AGAACCTACCAAATGGTTTG+TGG 0.525495 8.3:-8139949 MS.gene036559:CDS
TGAAGTAAACGAGTCTAGAA+AGG 0.527639 8.3:-8136757 MS.gene036559:intron
CTATGCAACTAACCTCGAAT+GGG 0.528808 8.3:+8134913 None:intergenic
GAACCTACCAAATGGTTTGT+GGG 0.530784 8.3:-8139948 MS.gene036559:CDS
GGAGAATGGATCTCGCTGAA+TGG 0.532856 8.3:-8136615 MS.gene036559:CDS
ATCCCAGCAGAAAGGTATGA+AGG 0.533887 8.3:+8134948 None:intergenic
CTAACAATCGGATTGTTACT+GGG 0.533941 8.3:+8135959 None:intergenic
ACTATGCAACTAACCTCGAA+TGG 0.533959 8.3:+8134912 None:intergenic
GCAGCCGCGAAAACCAAGCA+TGG 0.537070 8.3:+8135810 None:intergenic
CTGCTGAAGATGCCGAGGAA+TGG 0.542700 8.3:-8137197 MS.gene036559:CDS
CAACTCTTGGGATAGTCCAA+GGG 0.543248 8.3:-8138264 MS.gene036559:CDS
GCTGTTGTAGCTCGTGGATG+GGG 0.543789 8.3:-8136810 MS.gene036559:CDS
GAGAAAGTGTTCTCTGAGAT+GGG 0.545008 8.3:-8135265 MS.gene036559:CDS
TCTTCTCTAAGCTATAAGGT+TGG 0.545042 8.3:-8135241 MS.gene036559:CDS
CGGGTGTTCACCTTTGGCAA+AGG 0.546332 8.3:-8140298 MS.gene036559:CDS
AGCTACAGACATGGTCAATG+AGG 0.549342 8.3:-8137634 MS.gene036559:CDS
ATCTCGCTGAATGGATCCAC+CGG 0.551203 8.3:-8136606 MS.gene036559:CDS
TCCACTTATTGGTACACCAC+AGG 0.551881 8.3:-8135520 MS.gene036559:intron
AAGAACAAAGTGGTTGCCAC+TGG 0.552284 8.3:-8137264 MS.gene036559:CDS
GACTCACTGAAACAGCGGCT+TGG 0.553809 8.3:+8135577 None:intergenic
TTTGGCAAAGGTAGAAGTGA+TGG 0.554474 8.3:-8140286 MS.gene036559:CDS
TTCACTAGAAATCCAAGCAC+TGG 0.555536 8.3:-8138131 MS.gene036559:CDS
AATGTGAAGAACCTACCAAA+TGG 0.556468 8.3:-8139956 MS.gene036559:CDS
AATGTCTATGTTGAAGCTAA+GGG 0.556560 8.3:-8138440 MS.gene036559:CDS
ATCACTTCTACCTTTGCCAA+AGG 0.558590 8.3:+8140288 None:intergenic
GAAGTGGAGGATCTAACAAT+CGG 0.559678 8.3:+8135947 None:intergenic
AGCTGCACTAGTTGCTGATG+AGG 0.561217 8.3:-8135197 MS.gene036559:intron
CTCTGTTCGCTCTGGTGCTG+CGG 0.562208 8.3:-8139846 MS.gene036559:intron
AGCCAAATGTCATTTGGGTA+AGG 0.565475 8.3:+8135000 None:intergenic
AAGAAGCAGAAATATTCTCT+AGG 0.566284 8.3:-8135858 MS.gene036559:CDS
CATGCTGCTGTTGTAGCTCG+TGG 0.566313 8.3:-8136816 MS.gene036559:CDS
TCGGTTGATATAGTGAGTCC+AGG 0.567950 8.3:+8140001 None:intergenic
GCTACAGACATGGTCAATGA+GGG 0.571478 8.3:-8137633 MS.gene036559:CDS
TAATCAGTTCCTACATCCAC+AGG 0.573251 8.3:-8137562 MS.gene036559:intron
TTTGCAGCATGACCCATTCG+AGG 0.573401 8.3:-8134925 MS.gene036559:intron
CACCAGAGCGAACAGAGACA+AGG 0.574055 8.3:+8139852 None:intergenic
TGTGTCCATCATTCCAGGCA+TGG 0.575045 8.3:+8138865 None:intergenic
TTTCTTTATGTGTAGTTGGG+AGG 0.575150 8.3:-8140073 MS.gene036559:intron
GCCTGTGGTGTACCAATAAG+TGG 0.576156 8.3:+8135519 None:intergenic
AAGGGAGAAAAGTTTCCCTC+AGG 0.576363 8.3:-8138422 MS.gene036559:intron
ATGATAGGTGGTTGTAATTG+GGG 0.576454 8.3:-8136655 MS.gene036559:intron
ACTATCCCAAGAGTTGAAAA+CGG 0.577231 8.3:+8138271 None:intergenic
TCAGGAAGAAATTCATGAAG+TGG 0.578057 8.3:+8135931 None:intergenic
GATTCCAATTGCTAGGCTTG+CGG 0.579903 8.3:-8134309 MS.gene036559:CDS
GAGACAAGTCCAGAGGACAT+TGG 0.583747 8.3:-8136891 MS.gene036559:CDS
GAATCACTACAAGGATATGA+TGG 0.584035 8.3:-8137838 MS.gene036559:intron
CAGCCGCGAAAACCAAGCAT+GGG 0.584352 8.3:+8135811 None:intergenic
TTCTCCTCCGGCATTAAGCG+AGG 0.585326 8.3:-8136556 MS.gene036559:CDS
TCCTAGAATCACCTCACCGG+TGG 0.587781 8.3:+8136590 None:intergenic
GCTGCAAAATCCCAGCAGAA+AGG 0.590533 8.3:+8134940 None:intergenic
GGGGATATGGTAATATCAGA+AGG 0.593273 8.3:-8136636 MS.gene036559:CDS
GTTGGAATATGCGGAGAGCA+CGG 0.594197 8.3:-8134485 MS.gene036559:CDS
ATGTATATACCTGTGGATGT+AGG 0.597911 8.3:+8137553 None:intergenic
AGTGAACTAACTTCTCAGAC+AGG 0.598492 8.3:-8135886 MS.gene036559:CDS
CTGTTCAAGAAAATAGATTG+TGG 0.598558 8.3:-8137707 MS.gene036559:CDS
GGCTACAGTAGAGATGATGT+TGG 0.600752 8.3:-8134981 MS.gene036559:CDS
CCTCCCACAAACCATTTGGT+AGG 0.601228 8.3:+8139945 None:intergenic
TATTCGTTCTGCAATCAAGA+TGG 0.601337 8.3:-8137601 MS.gene036559:CDS
TCTTGGATTGAATGATGAAG+TGG 0.606505 8.3:-8138834 MS.gene036559:CDS
GCCGAGGAATGGCATGCACA+AGG 0.608068 8.3:-8137186 MS.gene036559:CDS
TTGTCCTCAAACAATGAGTG+TGG 0.609601 8.3:+8138551 None:intergenic
AGATGCTTATAAGGAACTTG+AGG 0.611268 8.3:-8137880 MS.gene036559:CDS
GGAAGAAATTCATGAAGTGG+AGG 0.614194 8.3:+8135934 None:intergenic
GATTATCAGGTTGGAATATG+CGG 0.615365 8.3:-8134494 MS.gene036559:intron
GCAAAGAATGCAATAGAAGA+CGG 0.618305 8.3:+8134455 None:intergenic
CTGGGAGGCCATCCATTGCA+CGG 0.625961 8.3:+8135977 None:intergenic
GACAAGTCCAGAGGACATTG+GGG 0.626278 8.3:-8136889 MS.gene036559:CDS
CTTTCCTAGAATCACCTCAC+CGG 0.628949 8.3:+8136587 None:intergenic
GTTGGCATCTTGACAGCTAG+AGG 0.632776 8.3:-8136852 MS.gene036559:CDS
AAAGGCTAAAGGCTGTGAGA+AGG 0.633234 8.3:-8136086 MS.gene036559:CDS
GCTGTTTCAGTGAGTCGCAA+TGG 0.633248 8.3:-8135570 MS.gene036559:CDS
AATTCTTGAGAATCACTACA+AGG 0.637925 8.3:-8137847 MS.gene036559:CDS
TGATCAAATAAGGAAGCTGA+AGG 0.638289 8.3:-8136508 MS.gene036559:intron
ACTTTGCAGGACTGAACACA+TGG 0.638986 8.3:-8136320 MS.gene036559:intron
GCAGCTCAAGTTGCAGTGTG+AGG 0.641089 8.3:-8134287 None:intergenic
ATTGCGACTCACTGAAACAG+CGG 0.642670 8.3:+8135572 None:intergenic
AGGGGATGCAGGCAAACCAG+TGG 0.643058 8.3:+8137248 None:intergenic
AGGAACTGATTAAGATGTTG+TGG 0.643869 8.3:+8137573 None:intergenic
TGATTCTGGCAATAGCAACA+AGG 0.645308 8.3:-8140610 MS.gene036559:intron
GCTAGAAGAAATGGTGCACA+AGG 0.646679 8.3:-8136349 MS.gene036559:CDS
GGTACTTGACCAGAAAGGTG+TGG 0.646929 8.3:-8134672 MS.gene036559:CDS
TTACAGGTACTTGACCAGAA+AGG 0.649625 8.3:-8134677 MS.gene036559:intron
AAATCCTCGCTTAATGCCGG+AGG 0.651577 8.3:+8136552 None:intergenic
GAAACATTAATCAGATAACT+GGG 0.658984 8.3:-8138229 MS.gene036559:CDS
GTACTTGACCAGAAAGGTGT+GGG 0.660833 8.3:-8134671 MS.gene036559:CDS
ATCTAAGTACAAGAACAAAG+TGG 0.663856 8.3:-8137274 MS.gene036559:CDS
GGCATCTTGACAGCTAGAGG+TGG 0.670250 8.3:-8136849 MS.gene036559:CDS
AAAGGCATTAAACATGACAC+AGG 0.677867 8.3:-8138506 MS.gene036559:CDS
CTACAGACATGGTCAATGAG+GGG 0.682158 8.3:-8137632 MS.gene036559:CDS
TGGCCATTACGCAAGAACAG+AGG 0.683948 8.3:-8136056 MS.gene036559:CDS
GAGCGAACAGAGACAAGGAG+AGG 0.687792 8.3:+8139857 None:intergenic
GCTGAATGGATCCACCGGTG+AGG 0.694190 8.3:-8136601 MS.gene036559:CDS
AAGGACAGAGACAAGTCCAG+AGG 0.697658 8.3:-8136898 MS.gene036559:CDS
CCTACCAAATGGTTTGTGGG+AGG 0.699192 8.3:-8139945 MS.gene036559:CDS
AATCAAAATAGCTACAGACA+TGG 0.710159 8.3:-8137643 MS.gene036559:CDS
GTTCACTGCTGAAGATGCCG+AGG 0.719827 8.3:-8137202 MS.gene036559:CDS
GTTGATATAGTGAGTCCAGG+AGG 0.743820 8.3:+8140004 None:intergenic
ACAATCGGATTGTTACTGGG+AGG 0.747242 8.3:+8135962 None:intergenic
GGAATATGCGGAGAGCACGG+TGG 0.753583 8.3:-8134482 MS.gene036559:CDS
ACAAGTCCAGAGGACATTGG+GGG 0.760716 8.3:-8136888 MS.gene036559:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTTTATATATTAAGAAA+AGG + chr8.3:8140187-8140206 None:intergenic 10.0%
!! GTTAATGAAAAATAAATAAA+TGG + chr8.3:8137549-8137568 None:intergenic 10.0%
!! ATAAATGGATATTATTATAC+TGG + chr8.3:8138237-8138256 None:intergenic 15.0%
!! GACTAAAATAAAAAACATTA+CGG - chr8.3:8134520-8134539 MS.gene036559:intron 15.0%
!! TATTTACAAAAGAAAGTTAA+AGG + chr8.3:8137418-8137437 None:intergenic 15.0%
!!! TACTAATTTGTCAATAATAT+AGG + chr8.3:8138188-8138207 None:intergenic 15.0%
!!! TTTAAATTTGATTCCTTTTA+TGG - chr8.3:8135967-8135986 MS.gene036559:CDS 15.0%
!!! TTTTATTGTATGTTATACTT+AGG - chr8.3:8136328-8136347 MS.gene036559:CDS 15.0%
!! AAAAGTTCCATTGAATTTAT+AGG - chr8.3:8135925-8135944 MS.gene036559:CDS 20.0%
!! AAACATCTTATGACAAATAA+TGG + chr8.3:8135228-8135247 None:intergenic 20.0%
!! ATACAATTATGATTTCCAAA+AGG - chr8.3:8134426-8134445 MS.gene036559:CDS 20.0%
!! ATACATACTTGCATTATTAA+AGG - chr8.3:8137991-8138010 MS.gene036559:intron 20.0%
!! CTAAAGATTAAGTAAGAAAA+AGG + chr8.3:8139425-8139444 None:intergenic 20.0%
!! TAATATCCATTTATGATGAT+AGG - chr8.3:8138243-8138262 MS.gene036559:CDS 20.0%
!! TAATGAGATTATAAAAGAGT+TGG - chr8.3:8134389-8134408 MS.gene036559:intron 20.0%
!! TCAAATTGAAATGATATTGT+AGG - chr8.3:8137171-8137190 MS.gene036559:CDS 20.0%
!! TGAATGCACTAAAATTTAAA+AGG - chr8.3:8138659-8138678 MS.gene036559:intron 20.0%
!!! AATAATGCACTGATTATAAA+AGG - chr8.3:8137434-8137453 MS.gene036559:intron 20.0%
!!! AATTTTGTGCAAAATGAAAT+GGG - chr8.3:8135008-8135027 MS.gene036559:CDS 20.0%
!!! TAAAATTAGAAAGTGTAAAG+AGG + chr8.3:8139836-8139855 None:intergenic 20.0%
!!! TAATTTGTCAATAATATAGG+AGG + chr8.3:8138185-8138204 None:intergenic 20.0%
!!! TAATTTTGTGCAAAATGAAA+TGG - chr8.3:8135007-8135026 MS.gene036559:CDS 20.0%
!!! TAGTTTATTTGTTTAGTTTG+AGG - chr8.3:8137612-8137631 MS.gene036559:CDS 20.0%
!!! TATTTGCTATATAATCATAG+CGG + chr8.3:8135529-8135548 None:intergenic 20.0%
! AAAAGAGAAAAGGAAAATGA+TGG + chr8.3:8137791-8137810 None:intergenic 25.0%
! AAAAGTTTCAACCAAATCAA+TGG + chr8.3:8136312-8136331 None:intergenic 25.0%
! AAATACAAATCATAGTGACA+TGG + chr8.3:8136889-8136908 None:intergenic 25.0%
! AAGACATTGGATATAATGAA+GGG + chr8.3:8137818-8137837 None:intergenic 25.0%
! AATACAAATCATAGTGACAT+GGG + chr8.3:8136888-8136907 None:intergenic 25.0%
! AATATTCAATCTATGGTGTT+TGG - chr8.3:8136725-8136744 MS.gene036559:intron 25.0%
! AATTTAAAAGGCTTGTATTG+TGG - chr8.3:8138671-8138690 MS.gene036559:intron 25.0%
! ACATTATTGACAACAATTAC+AGG - chr8.3:8140220-8140239 MS.gene036559:intron 25.0%
! ATAACTTGAAGTTAAAAACC+TGG + chr8.3:8135801-8135820 None:intergenic 25.0%
! ATATATATAGTACTAGTGGA+GGG - chr8.3:8135598-8135617 MS.gene036559:CDS 25.0%
! ATATATTACTGAAGTGAAGT+AGG - chr8.3:8135556-8135575 MS.gene036559:CDS 25.0%
! ATGATAGATGTGAAACAAAT+CGG + chr8.3:8139456-8139475 None:intergenic 25.0%
! ATGCTAAATACAACCATAAA+AGG + chr8.3:8135983-8136002 None:intergenic 25.0%
! ATTAAAGAAATCGCAAACAA+TGG - chr8.3:8135462-8135481 MS.gene036559:intron 25.0%
! CAAACTTATAGCATATAAAG+AGG + chr8.3:8138780-8138799 None:intergenic 25.0%
! CAAAGTGAAATATAAGGAAT+AGG + chr8.3:8135099-8135118 None:intergenic 25.0%
! CAAGTTCATAATTTATCAGT+AGG - chr8.3:8139203-8139222 MS.gene036559:intron 25.0%
! CAATGATATGAGTGAAATTA+CGG + chr8.3:8138494-8138513 None:intergenic 25.0%
! CATCTTGGTTATTCTTAATA+TGG - chr8.3:8140362-8140381 MS.gene036559:intron 25.0%
! CTAAAACACTAAACACAATA+TGG - chr8.3:8134757-8134776 MS.gene036559:intron 25.0%
! CTACTGATAAATTATGAACT+TGG + chr8.3:8139205-8139224 None:intergenic 25.0%
! CTCTTTATATGCTATAAGTT+TGG - chr8.3:8138778-8138797 MS.gene036559:CDS 25.0%
! CTTTACACATGACATAATAA+AGG + chr8.3:8135389-8135408 None:intergenic 25.0%
! CTTTATTATGTCATGTGTAA+AGG - chr8.3:8135387-8135406 MS.gene036559:intron 25.0%
! GAAACATTAATCAGATAACT+GGG - chr8.3:8136684-8136703 MS.gene036559:intron 25.0%
! GGAAATAACGATAAAAGTAA+TGG + chr8.3:8140131-8140150 None:intergenic 25.0%
! GTAGTCAAATTGAAAATTTG+AGG - chr8.3:8140569-8140588 MS.gene036559:intron 25.0%
! TAAGACATTGGATATAATGA+AGG + chr8.3:8137819-8137838 None:intergenic 25.0%
! TAATTAACGTAATCCATGTA+CGG - chr8.3:8137388-8137407 MS.gene036559:intron 25.0%
! TACTTGCATTATTAAAGGTA+AGG - chr8.3:8137996-8138015 MS.gene036559:intron 25.0%
! TAGAGATACTTTATACATAC+TGG + chr8.3:8137903-8137922 None:intergenic 25.0%
! TATATTACTGAAGTGAAGTA+GGG - chr8.3:8135557-8135576 MS.gene036559:CDS 25.0%
! TATTTCCATTATTGCATAGT+TGG - chr8.3:8140144-8140163 MS.gene036559:intron 25.0%
! TCAAAATCTGATTGTTGATA+AGG + chr8.3:8138907-8138926 None:intergenic 25.0%
! TCAAACATCAGTAAATCATA+GGG + chr8.3:8139243-8139262 None:intergenic 25.0%
! TGTATGTTATACTTAGGTAA+TGG - chr8.3:8136334-8136353 MS.gene036559:CDS 25.0%
! TGTTAAGTTACCTTCAAATT+TGG + chr8.3:8140311-8140330 None:intergenic 25.0%
!! ATTTTGTGCAAAATGAAATG+GGG - chr8.3:8135009-8135028 MS.gene036559:CDS 25.0%
!! CTAAGATAGTCAAATTTTGA+AGG - chr8.3:8134463-8134482 MS.gene036559:CDS 25.0%
!! GATTAATTACGTTGATTATC+AGG - chr8.3:8140406-8140425 MS.gene036559:intron 25.0%
!! TATCAACAATCAGATTTTGA+GGG - chr8.3:8138907-8138926 MS.gene036559:intron 25.0%
!! TCATTTTGCTAAATAATGCA+CGG - chr8.3:8137464-8137483 MS.gene036559:intron 25.0%
!! TTATCAACAATCAGATTTTG+AGG - chr8.3:8138906-8138925 MS.gene036559:intron 25.0%
!! TTTAGTATCTTCCATTGATT+TGG - chr8.3:8136298-8136317 MS.gene036559:intron 25.0%
!!! AACCAAATTTTTGAGATCAT+TGG + chr8.3:8136441-8136460 None:intergenic 25.0%
!!! AGATTATAAAAGAGTTGGTA+AGG - chr8.3:8134394-8134413 MS.gene036559:intron 25.0%
!!! CATTCAAAACTTTAAGACAT+TGG + chr8.3:8137831-8137850 None:intergenic 25.0%
!!! GAAGCAGATTTTTTTTCATT+CGG - chr8.3:8139881-8139900 MS.gene036559:CDS 25.0%
AAACACAATATGGCAAAACA+AGG - chr8.3:8134767-8134786 MS.gene036559:intron 30.0%
AACCAAAAATCTAACCTGAA+CGG + chr8.3:8140515-8140534 None:intergenic 30.0%
AACGGTTTATATACTGAAGA+AGG - chr8.3:8135695-8135714 MS.gene036559:intron 30.0%
AAGAAGCAGAAATATTCTCT+AGG - chr8.3:8139055-8139074 MS.gene036559:intron 30.0%
AATCAAAATAGCTACAGACA+TGG - chr8.3:8137270-8137289 MS.gene036559:CDS 30.0%
AATCAAAATGTGCACAGAAA+AGG - chr8.3:8140271-8140290 MS.gene036559:CDS 30.0%
AATGTCTATGTTGAAGCTAA+GGG - chr8.3:8136473-8136492 MS.gene036559:intron 30.0%
AATTCTTGAGAATCACTACA+AGG - chr8.3:8137066-8137085 MS.gene036559:intron 30.0%
ACGTACACCTATAAATTCAA+TGG + chr8.3:8135935-8135954 None:intergenic 30.0%
ACTGGTGAAAAGAAACTTTA+TGG - chr8.3:8136800-8136819 MS.gene036559:CDS 30.0%
ACTTTGTTCTTGTACTTAGA+TGG + chr8.3:8137640-8137659 None:intergenic 30.0%
AGACATTGGATATAATGAAG+GGG + chr8.3:8137817-8137836 None:intergenic 30.0%
AGACTCGTTTACTTCAATAT+TGG + chr8.3:8138152-8138171 None:intergenic 30.0%
AGATAAAATTGGCCAAACAA+CGG + chr8.3:8135505-8135524 None:intergenic 30.0%
AGCCAATGATCTCAAAAATT+TGG - chr8.3:8136436-8136455 MS.gene036559:intron 30.0%
AGCCATATATATAGTACTAG+TGG - chr8.3:8135594-8135613 MS.gene036559:CDS 30.0%
AGTATATAAACCGTTGAGTA+TGG + chr8.3:8135690-8135709 None:intergenic 30.0%
AGTATCAATCCATTTGTGTT+TGG - chr8.3:8137851-8137870 MS.gene036559:CDS 30.0%
AGTATTGCTTAGCTCAATTT+AGG - chr8.3:8135766-8135785 MS.gene036559:intron 30.0%
ATCAAAATGTGCACAGAAAA+GGG - chr8.3:8140272-8140291 MS.gene036559:CDS 30.0%
ATCATAGCGGTAGATAAAAT+TGG + chr8.3:8135516-8135535 None:intergenic 30.0%
ATCTAAGTACAAGAACAAAG+TGG - chr8.3:8137639-8137658 MS.gene036559:CDS 30.0%
ATTTGGAAACTTTCATGTCT+TGG - chr8.3:8138380-8138399 MS.gene036559:intron 30.0%
CAAAACATTGTATACTTGCA+AGG - chr8.3:8134553-8134572 MS.gene036559:intron 30.0%
CAAAATTTGATCACACATCT+TGG - chr8.3:8140347-8140366 MS.gene036559:intron 30.0%
CAATTTGTAATCATGTGAAC+AGG - chr8.3:8139263-8139282 MS.gene036559:intron 30.0%
CATATATATAGTACTAGTGG+AGG - chr8.3:8135597-8135616 MS.gene036559:CDS 30.0%
CGAAACATTAATCAGATAAC+TGG - chr8.3:8136683-8136702 MS.gene036559:intron 30.0%
CTAGTCATGAAACTAAATCT+AGG + chr8.3:8137934-8137953 None:intergenic 30.0%
CTCCACTAGTACTATATATA+TGG + chr8.3:8135599-8135618 None:intergenic 30.0%
CTGTTCAAGAAAATAGATTG+TGG - chr8.3:8137206-8137225 MS.gene036559:CDS 30.0%
GAAAAGCTAAAGCAATCAAA+AGG - chr8.3:8136389-8136408 MS.gene036559:CDS 30.0%
GACATCAAGTGAGTTTAATA+AGG - chr8.3:8139616-8139635 MS.gene036559:intron 30.0%
GCAATTGATAAATCAAGAGA+GGG + chr8.3:8136587-8136606 None:intergenic 30.0%
GGAACTAGAAAAATGGTATA+AGG - chr8.3:8135408-8135427 MS.gene036559:intron 30.0%
GTCAAACATCAGTAAATCAT+AGG + chr8.3:8139244-8139263 None:intergenic 30.0%
GTGTAAAGGAACTAGAAAAA+TGG - chr8.3:8135401-8135420 MS.gene036559:intron 30.0%
TAAAGAAAGCAGCAATTCAA+AGG + chr8.3:8134828-8134847 None:intergenic 30.0%
TACAACAATGTATATACCTG+TGG + chr8.3:8137370-8137389 None:intergenic 30.0%
TACTGCTAAACCAAATTTGA+AGG - chr8.3:8140298-8140317 MS.gene036559:CDS 30.0%
TAGATAAAGAATGCTTACCA+AGG + chr8.3:8134670-8134689 None:intergenic 30.0%
TATCCATTTATGATGATAGG+TGG - chr8.3:8138246-8138265 MS.gene036559:CDS 30.0%
TCATATCATTGTTGTGTATC+AGG - chr8.3:8138503-8138522 MS.gene036559:CDS 30.0%
TCATTTGCAATCTACACAAA+TGG + chr8.3:8139863-8139882 None:intergenic 30.0%
TGCAATTGATAAATCAAGAG+AGG + chr8.3:8136588-8136607 None:intergenic 30.0%
TGCTGTGAATATTCAATCTA+TGG - chr8.3:8136718-8136737 MS.gene036559:intron 30.0%
TGCTTTCTTTATGTGTAGTT+GGG - chr8.3:8134837-8134856 MS.gene036559:intron 30.0%
TTGGGACAAAGTGAAATATA+AGG + chr8.3:8135105-8135124 None:intergenic 30.0%
TTTGGAAACTTTCATGTCTT+GGG - chr8.3:8138381-8138400 MS.gene036559:intron 30.0%
! AATTACGTTGATTATCAGGT+TGG - chr8.3:8140410-8140429 MS.gene036559:intron 30.0%
! ATCTATGGTGTTTGGTAATA+TGG - chr8.3:8136733-8136752 MS.gene036559:intron 30.0%
! CAATTTAGGATGTATATTCC+AGG - chr8.3:8135780-8135799 MS.gene036559:intron 30.0%
! CTAGATTTAGTTTCATGACT+AGG - chr8.3:8137932-8137951 MS.gene036559:CDS 30.0%
! TCTATGGTGTTTGGTAATAT+GGG - chr8.3:8136734-8136753 MS.gene036559:intron 30.0%
! TTTTGTGCAAAATGAAATGG+GGG - chr8.3:8135010-8135029 MS.gene036559:CDS 30.0%
!! TTTTAAAGGATTCCCAAGAA+AGG + chr8.3:8135036-8135055 None:intergenic 30.0%
!!! AGTTTTTTGCTTCAGATGAA+AGG - chr8.3:8138809-8138828 MS.gene036559:CDS 30.0%
!!! TAACATGAAGCAGCATTTTT+TGG - chr8.3:8139524-8139543 MS.gene036559:intron 30.0%
AAACAAAGCAATGAAGTCCT+TGG - chr8.3:8134650-8134669 MS.gene036559:CDS 35.0%
AACCCAATTCAATCAAGTGT+TGG + chr8.3:8135124-8135143 None:intergenic 35.0%
AATCAGATAACTGGGCTAAT+GGG - chr8.3:8136692-8136711 MS.gene036559:intron 35.0%
AATGTGAAGAACCTACCAAA+TGG - chr8.3:8134957-8134976 MS.gene036559:CDS 35.0%
ACCCAATTCAATCAAGTGTT+GGG + chr8.3:8135123-8135142 None:intergenic 35.0%
ACTATCCCAAGAGTTGAAAA+CGG + chr8.3:8136645-8136664 None:intergenic 35.0%
AGACGTTTCTTAGACATGTT+TGG - chr8.3:8136152-8136171 MS.gene036559:intron 35.0%
AGATGCTTATAAGGAACTTG+AGG - chr8.3:8137033-8137052 MS.gene036559:intron 35.0%
AGGAACTGATTAAGATGTTG+TGG + chr8.3:8137343-8137362 None:intergenic 35.0%
AGGTTGAAACACTCATTGTT+TGG + chr8.3:8135347-8135366 None:intergenic 35.0%
AGTTAAAGGAAAACCGTACA+TGG + chr8.3:8137404-8137423 None:intergenic 35.0%
ATAAATCAAGAGAGGGTTTG+TGG + chr8.3:8136580-8136599 None:intergenic 35.0%
ATAAGTGGAACCATTATCTC+TGG + chr8.3:8139382-8139401 None:intergenic 35.0%
ATGATAGGTGGTTGTAATTG+GGG - chr8.3:8138258-8138277 MS.gene036559:CDS 35.0%
ATGGACACAGTTCTTAATCT+TGG - chr8.3:8136062-8136081 MS.gene036559:CDS 35.0%
ATGTATATACCTGTGGATGT+AGG + chr8.3:8137363-8137382 None:intergenic 35.0%
ATTGCATTCTTTGCTCAACT+TGG - chr8.3:8140467-8140486 MS.gene036559:intron 35.0%
CAACCACCTATCATCATAAA+TGG + chr8.3:8138252-8138271 None:intergenic 35.0%
CACATGACTGATGTTTAGTT+TGG - chr8.3:8139174-8139193 MS.gene036559:intron 35.0%
CTAAAAGATGACGTTCATTG+AGG + chr8.3:8136283-8136302 None:intergenic 35.0%
CTAACAATCGGATTGTTACT+GGG + chr8.3:8138957-8138976 None:intergenic 35.0%
CTGCTTTCTTTATGTGTAGT+TGG - chr8.3:8134836-8134855 MS.gene036559:intron 35.0%
CTTCATGAATTTCTTCCTGA+AGG - chr8.3:8138985-8139004 MS.gene036559:intron 35.0%
GAAGGGGAAAAAAAGAGAAA+AGG + chr8.3:8137801-8137820 None:intergenic 35.0%
GAATCACTACAAGGATATGA+TGG - chr8.3:8137075-8137094 MS.gene036559:intron 35.0%
GAATGTCTATGTTGAAGCTA+AGG - chr8.3:8136472-8136491 MS.gene036559:intron 35.0%
GATCATTTGTTTCCGTTGTT+TGG - chr8.3:8135490-8135509 MS.gene036559:intron 35.0%
GATGATAGGTGGTTGTAATT+GGG - chr8.3:8138257-8138276 MS.gene036559:CDS 35.0%
GATTAAGCAACACACTAAAC+TGG - chr8.3:8134485-8134504 MS.gene036559:CDS 35.0%
GCAAAGAATGCAATAGAAGA+CGG + chr8.3:8140461-8140480 None:intergenic 35.0%
GCAATAACAGCTAGAAGAAA+TGG - chr8.3:8138555-8138574 MS.gene036559:CDS 35.0%
GGTAATATGGGAAATACTTC+AGG - chr8.3:8136746-8136765 MS.gene036559:intron 35.0%
TAATCAGATAACTGGGCTAA+TGG - chr8.3:8136691-8136710 MS.gene036559:intron 35.0%
TACTGTAGCCAAATGTCATT+TGG + chr8.3:8139922-8139941 None:intergenic 35.0%
TAGGATTGAAAAACTCTCTG+AGG - chr8.3:8139074-8139093 MS.gene036559:intron 35.0%
TATATGTGAGCCATACTCAA+CGG - chr8.3:8135677-8135696 MS.gene036559:intron 35.0%
TATGCGTAATGCATAAGCAT+TGG - chr8.3:8135159-8135178 MS.gene036559:intron 35.0%
TATTCGTTCTGCAATCAAGA+TGG - chr8.3:8137312-8137331 MS.gene036559:intron 35.0%
TCAACCTCTGATCACATTTA+AGG - chr8.3:8135360-8135379 MS.gene036559:intron 35.0%
TCAAGTTCCTTATAAGCATC+TGG + chr8.3:8137034-8137053 None:intergenic 35.0%
TCACATATAGACACAGAAGA+GGG + chr8.3:8135666-8135685 None:intergenic 35.0%
TCAGGAAGAAATTCATGAAG+TGG + chr8.3:8138985-8139004 None:intergenic 35.0%
TCCCAACACTTGATTGAATT+GGG - chr8.3:8135119-8135138 MS.gene036559:intron 35.0%
TCTAACAATCGGATTGTTAC+TGG + chr8.3:8138958-8138977 None:intergenic 35.0%
TCTTCTCTAAGCTATAAGGT+TGG - chr8.3:8139672-8139691 MS.gene036559:intron 35.0%
TCTTGGATTGAATGATGAAG+TGG - chr8.3:8136079-8136098 MS.gene036559:CDS 35.0%
TGAAGTAAACGAGTCTAGAA+AGG - chr8.3:8138156-8138175 MS.gene036559:CDS 35.0%
TGATCAAATAAGGAAGCTGA+AGG - chr8.3:8138405-8138424 MS.gene036559:intron 35.0%
TGATGATAGGTGGTTGTAAT+TGG - chr8.3:8138256-8138275 MS.gene036559:CDS 35.0%
TGGAAATCTGATAGATGTAG+AGG + chr8.3:8136031-8136050 None:intergenic 35.0%
TGGTAATATCAGAAGGAGAA+TGG - chr8.3:8138284-8138303 MS.gene036559:CDS 35.0%
TTGATATTCTCGACATGCTT+CGG + chr8.3:8134934-8134953 None:intergenic 35.0%
TTTCGATACTTAATAGCCCT+TGG + chr8.3:8136668-8136687 None:intergenic 35.0%
TTTCTTTATGTGTAGTTGGG+AGG - chr8.3:8134840-8134859 MS.gene036559:intron 35.0%
! AAATTTGAGGACTCTTTTGC+AGG - chr8.3:8140582-8140601 MS.gene036559:intron 35.0%
! ACTGTAGCCAAATGTCATTT+GGG + chr8.3:8139921-8139940 None:intergenic 35.0%
! CATTGTTGTGTATCAGGTTT+TGG - chr8.3:8138509-8138528 MS.gene036559:CDS 35.0%
! GAACTGATCAATGTACCTTT+TGG + chr8.3:8134444-8134463 None:intergenic 35.0%
! GAGATAATGGTTCCACTTAT+TGG - chr8.3:8139382-8139401 MS.gene036559:intron 35.0%
! GCTAATTCTAGTTGCTTCTT+TGG + chr8.3:8136614-8136633 None:intergenic 35.0%
! TCCTGCTAGTTAAAGAGTAT+TGG + chr8.3:8139591-8139610 None:intergenic 35.0%
! TGTAGTTCTACCAGAGATAA+TGG - chr8.3:8139369-8139388 MS.gene036559:intron 35.0%
!! AAAGGCATTAAACATGACAC+AGG - chr8.3:8136407-8136426 MS.gene036559:intron 35.0%
!! ACAAGGAAAGAGTGCAATTT+TGG - chr8.3:8137744-8137763 MS.gene036559:intron 35.0%
!! ACTGGTTTGATCTCTATGAT+GGG + chr8.3:8137885-8137904 None:intergenic 35.0%
!! CCTGCTAGTTAAAGAGTATT+GGG + chr8.3:8139590-8139609 None:intergenic 35.0%
!! GATTATCAGGTTGGAATATG+CGG - chr8.3:8140419-8140438 MS.gene036559:intron 35.0%
!! GGAACTTTTCAGTTTTCAAG+TGG + chr8.3:8135914-8135933 None:intergenic 35.0%
!! TAAAGCCGTTTTCAACTCTT+GGG - chr8.3:8136637-8136656 MS.gene036559:CDS 35.0%
!! TACTGGTTTGATCTCTATGA+TGG + chr8.3:8137886-8137905 None:intergenic 35.0%
!! TATTGCTTAGAGAAGTGTTG+CGG + chr8.3:8136228-8136247 None:intergenic 35.0%
!! TTAAAGCCGTTTTCAACTCT+TGG - chr8.3:8136636-8136655 MS.gene036559:CDS 35.0%
!!! AAGCATTGGTGACACTTTTT+GGG - chr8.3:8135173-8135192 MS.gene036559:intron 35.0%
!!! CTGTCTTTCTGTTTTAACAG+CGG - chr8.3:8134595-8134614 MS.gene036559:intron 35.0%
!!! TAAGCATTGGTGACACTTTT+TGG - chr8.3:8135172-8135191 MS.gene036559:intron 35.0%
!!! TGTCTTTCTGTTTTAACAGC+GGG - chr8.3:8134596-8134615 MS.gene036559:intron 35.0%
AAGAAAAAGGAACATGCCTG+TGG + chr8.3:8139412-8139431 None:intergenic 40.0%
AAGATGTAGTTGCTGGAATC+AGG - chr8.3:8136972-8136991 MS.gene036559:intron 40.0%
ACTATGCAACTAACCTCGAA+TGG + chr8.3:8140004-8140023 None:intergenic 40.0%
AGAACCTACCAAATGGTTTG+TGG - chr8.3:8134964-8134983 MS.gene036559:CDS 40.0%
AGAGTTTCTCACTAATGCTC+AGG - chr8.3:8136823-8136842 MS.gene036559:CDS 40.0%
AGTGAACTAACTTCTCAGAC+AGG - chr8.3:8139027-8139046 MS.gene036559:intron 40.0%
AGTTTGAATAGAGAGTCGTG+TGG + chr8.3:8140084-8140103 None:intergenic 40.0%
ATCACTTCTACCTTTGCCAA+AGG + chr8.3:8134628-8134647 None:intergenic 40.0%
ATCTATCAGATTTCCATGCC+TGG - chr8.3:8136035-8136054 MS.gene036559:CDS 40.0%
ATGGGAAATACTTCAGGAAC+TGG - chr8.3:8136752-8136771 MS.gene036559:intron 40.0%
ATGGTGGCTGTTTATGATTC+TGG - chr8.3:8134289-8134308 MS.gene036559:CDS 40.0%
ATTTCTTCCTGAAGGTGACT+TGG - chr8.3:8138993-8139012 MS.gene036559:intron 40.0%
CACATATAGACACAGAAGAG+GGG + chr8.3:8135665-8135684 None:intergenic 40.0%
CACGCAAGCATCATATTAAG+AGG + chr8.3:8139140-8139159 None:intergenic 40.0%
CATTCCACACTCATTGTTTG+AGG - chr8.3:8136358-8136377 MS.gene036559:CDS 40.0%
CCCAATACTCTTTAACTAGC+AGG - chr8.3:8139587-8139606 MS.gene036559:intron 40.0%
CTAGCTGTTATTGCATCTTC+AGG + chr8.3:8138549-8138568 None:intergenic 40.0%
CTATGCAACTAACCTCGAAT+GGG + chr8.3:8140003-8140022 None:intergenic 40.0%
CTCACATATAGACACAGAAG+AGG + chr8.3:8135667-8135686 None:intergenic 40.0%
GAAGGAAAGTAACGCAACTT+AGG - chr8.3:8135713-8135732 MS.gene036559:intron 40.0%
GAAGTGGAGGATCTAACAAT+CGG + chr8.3:8138969-8138988 None:intergenic 40.0%
GACCTTACCCAAATGACATT+TGG - chr8.3:8139911-8139930 MS.gene036559:CDS 40.0%
GCAAGCATCATATTAAGAGG+AGG + chr8.3:8139137-8139156 None:intergenic 40.0%
GCTAAGAGACCAAACACAAA+TGG + chr8.3:8137863-8137882 None:intergenic 40.0%
GGAAGAAATTCATGAAGTGG+AGG + chr8.3:8138982-8139001 None:intergenic 40.0%
GGGGATATGGTAATATCAGA+AGG - chr8.3:8138277-8138296 MS.gene036559:CDS 40.0%
GGGTTCTTCTCTAAGCTATA+AGG - chr8.3:8139668-8139687 MS.gene036559:intron 40.0%
GTCCCAACACTTGATTGAAT+TGG - chr8.3:8135118-8135137 MS.gene036559:intron 40.0%
GTGACCTTAAATGTGATCAG+AGG + chr8.3:8135367-8135386 None:intergenic 40.0%
GTTTGAATAGAGAGTCGTGT+GGG + chr8.3:8140083-8140102 None:intergenic 40.0%
TAATCAGTTCCTACATCCAC+AGG - chr8.3:8137351-8137370 MS.gene036559:intron 40.0%
TATGTGTAGTTGGGAGGAAA+GGG - chr8.3:8134846-8134865 MS.gene036559:intron 40.0%
TCGCACCAACTATGCAATAA+TGG + chr8.3:8140152-8140171 None:intergenic 40.0%
TGAATGATGAAGTGGTTGCT+GGG - chr8.3:8136087-8136106 MS.gene036559:CDS 40.0%
TGATTCTGGCAATAGCAACA+AGG - chr8.3:8134303-8134322 MS.gene036559:CDS 40.0%
TGCTTCAGATGAAAGGCTAA+AGG - chr8.3:8138816-8138835 MS.gene036559:CDS 40.0%
TGGATGTTGCAATGTCGAAT+TGG - chr8.3:8137226-8137245 MS.gene036559:CDS 40.0%
TGTAATCATGTGAACAGGCT+GGG - chr8.3:8139268-8139287 MS.gene036559:intron 40.0%
TGTCTTGGGCTGATCAAATA+AGG - chr8.3:8138395-8138414 MS.gene036559:intron 40.0%
TTACAGGTACTTGACCAGAA+AGG - chr8.3:8140236-8140255 MS.gene036559:intron 40.0%
TTATGTGTAGTTGGGAGGAA+AGG - chr8.3:8134845-8134864 MS.gene036559:intron 40.0%
TTCACTAGAAATCCAAGCAC+TGG - chr8.3:8136782-8136801 MS.gene036559:CDS 40.0%
TTCCTTCATACCTTTCTGCT+GGG - chr8.3:8139963-8139982 MS.gene036559:CDS 40.0%
TTGAATGATGAAGTGGTTGC+TGG - chr8.3:8136086-8136105 MS.gene036559:CDS 40.0%
TTGCATGCCAGATGCTTATA+AGG - chr8.3:8137024-8137043 MS.gene036559:intron 40.0%
TTGGCAGAAATGGCAACAAT+TGG - chr8.3:8134876-8134895 MS.gene036559:intron 40.0%
TTGTAATCATGTGAACAGGC+TGG - chr8.3:8139267-8139286 MS.gene036559:intron 40.0%
TTGTCCTCAAACAATGAGTG+TGG + chr8.3:8136365-8136384 None:intergenic 40.0%
TTTCCTCTGTTCTTGCGTAA+TGG + chr8.3:8138863-8138882 None:intergenic 40.0%
TTTGCAGGATTCCAATTGCT+AGG - chr8.3:8140597-8140616 MS.gene036559:intron 40.0%
TTTGGCAAAGGTAGAAGTGA+TGG - chr8.3:8134627-8134646 MS.gene036559:CDS 40.0%
! AGCCAAATGTCATTTGGGTA+AGG + chr8.3:8139916-8139935 None:intergenic 40.0%
! AGGTTAGTTGCATAGTTGTG+TGG - chr8.3:8140008-8140027 MS.gene036559:CDS 40.0%
! AGTTTCTTTTCACCAGTGCT+TGG + chr8.3:8136797-8136816 None:intergenic 40.0%
! ATCTGGCATGCAAGTTTTCA+TGG + chr8.3:8137017-8137036 None:intergenic 40.0%
! ATTGGAAAGCGTACTGGTAA+AGG - chr8.3:8137244-8137263 MS.gene036559:CDS 40.0%
! CGTTCATTGAGGAAGTGTAT+TGG + chr8.3:8136272-8136291 None:intergenic 40.0%
! GAACCTACCAAATGGTTTGT+GGG - chr8.3:8134965-8134984 MS.gene036559:CDS 40.0%
! TGTCATTTGGGTAAGGTCAT+TGG + chr8.3:8139909-8139928 None:intergenic 40.0%
! TTATTGCATAGTTGGTGCGA+TGG - chr8.3:8140152-8140171 MS.gene036559:intron 40.0%
!! CTCCGTTCAGGTTAGATTTT+TGG - chr8.3:8140510-8140529 MS.gene036559:intron 40.0%
!! GAGAAAGTGTTCTCTGAGAT+GGG - chr8.3:8139648-8139667 MS.gene036559:intron 40.0%
!! GAGACAAGGAGAGGTTTTAA+AGG + chr8.3:8135050-8135069 None:intergenic 40.0%
!! TGAGAAAGTGTTCTCTGAGA+TGG - chr8.3:8139647-8139666 MS.gene036559:intron 40.0%
!! TTCATGGTCTCTAGAACTTC+AGG + chr8.3:8137001-8137020 None:intergenic 40.0%
AAAGCAAGCACTTTCTCCTC+CGG - chr8.3:8138345-8138364 MS.gene036559:intron 45.0%
AAAGGCTAAAGGCTGTGAGA+AGG - chr8.3:8138827-8138846 MS.gene036559:CDS 45.0%
AAGAACAAAGTGGTTGCCAC+TGG - chr8.3:8137649-8137668 MS.gene036559:CDS 45.0%
AAGGGAGAAAAGTTTCCCTC+AGG - chr8.3:8136491-8136510 MS.gene036559:intron 45.0%
AATGAAATGGGGGCCTTTCT+TGG - chr8.3:8135020-8135039 MS.gene036559:CDS 45.0%
ACAATCGGATTGTTACTGGG+AGG + chr8.3:8138954-8138973 None:intergenic 45.0%
ACTTTGCAGGACTGAACACA+TGG - chr8.3:8138593-8138612 MS.gene036559:intron 45.0%
AGAACTGTGTCCATCATTCC+AGG + chr8.3:8136056-8136075 None:intergenic 45.0%
AGACAAGTCCAGAGGACATT+GGG - chr8.3:8138023-8138042 MS.gene036559:intron 45.0%
AGCTACAGACATGGTCAATG+AGG - chr8.3:8137279-8137298 MS.gene036559:CDS 45.0%
ATCAAGAGAGGGTTTGTGGA+TGG + chr8.3:8136576-8136595 None:intergenic 45.0%
ATCTCCTCCCACAAACCATT+TGG + chr8.3:8134975-8134994 None:intergenic 45.0%
ATGAAATGGGGGCCTTTCTT+GGG - chr8.3:8135021-8135040 MS.gene036559:CDS 45.0%
ATTGCGACTCACTGAAACAG+CGG + chr8.3:8139344-8139363 None:intergenic 45.0%
ATTGGATTATCTGTGCCTCC+TGG - chr8.3:8134894-8134913 MS.gene036559:intron 45.0%
CAACTCTTGGGATAGTCCAA+GGG - chr8.3:8136649-8136668 MS.gene036559:CDS 45.0%
CTACAGACATGGTCAATGAG+GGG - chr8.3:8137281-8137300 MS.gene036559:CDS 45.0%
CTTCCTTCATACCTTTCTGC+TGG - chr8.3:8139962-8139981 MS.gene036559:CDS 45.0%
CTTTCCTAGAATCACCTCAC+CGG + chr8.3:8138329-8138348 None:intergenic 45.0%
GATTCCAATTGCTAGGCTTG+CGG - chr8.3:8140604-8140623 MS.gene036559:intron 45.0%
GATTTCCATGCCTGGAATGA+TGG - chr8.3:8136043-8136062 MS.gene036559:CDS 45.0%
GCTACAGACATGGTCAATGA+GGG - chr8.3:8137280-8137299 MS.gene036559:CDS 45.0%
GCTAGAAGAAATGGTGCACA+AGG - chr8.3:8138564-8138583 MS.gene036559:CDS 45.0%
GGCTACAGTAGAGATGATGT+TGG - chr8.3:8139932-8139951 MS.gene036559:CDS 45.0%
GGCTGTGAGAAGGATGATAA+TGG - chr8.3:8138837-8138856 MS.gene036559:CDS 45.0%
GGTGGTTGTAATTGGGGATA+TGG - chr8.3:8138264-8138283 MS.gene036559:CDS 45.0%
GTGTTGAAGTTAGCACCTGA+GGG + chr8.3:8136509-8136528 None:intergenic 45.0%
GTTGATATAGTGAGTCCAGG+AGG + chr8.3:8134912-8134931 None:intergenic 45.0%
GTTGTGTGGTGTGTGATTTC+TGG - chr8.3:8140022-8140041 MS.gene036559:CDS 45.0%
TAGGGAGAAGATGTAGTTGC+TGG - chr8.3:8136965-8136984 MS.gene036559:intron 45.0%
TCAACTCTTGGGATAGTCCA+AGG - chr8.3:8136648-8136667 MS.gene036559:CDS 45.0%
TCCAAATCCTCGCTTAATGC+CGG + chr8.3:8138367-8138386 None:intergenic 45.0%
TCCACTTATTGGTACACCAC+AGG - chr8.3:8139393-8139412 MS.gene036559:intron 45.0%
TCCAGAATTGACTGAGATGC+AGG - chr8.3:8139300-8139319 MS.gene036559:intron 45.0%
TGGCTTCAAAAAGTGGAGAG+CGG - chr8.3:8136111-8136130 MS.gene036559:intron 45.0%
TTAGTTGACCCACACCTTTC+TGG + chr8.3:8140253-8140272 None:intergenic 45.0%
TTGTGGGAGGAGATACTTGA+AGG - chr8.3:8134981-8135000 MS.gene036559:CDS 45.0%
! AGTGTTGAAGTTAGCACCTG+AGG + chr8.3:8136510-8136529 None:intergenic 45.0%
! ATCCCAGCAGAAAGGTATGA+AGG + chr8.3:8139968-8139987 None:intergenic 45.0%
! GGAATTTTCCGTGCAATGGA+TGG - chr8.3:8138928-8138947 MS.gene036559:intron 45.0%
! GTACTTGACCAGAAAGGTGT+GGG - chr8.3:8140242-8140261 MS.gene036559:intron 45.0%
! TCGGTTGATATAGTGAGTCC+AGG + chr8.3:8134915-8134934 None:intergenic 45.0%
! TCTGAGGTTAATCCCATGCT+TGG - chr8.3:8139090-8139109 MS.gene036559:intron 45.0%
! TGAGGGAATTTTCCGTGCAA+TGG - chr8.3:8138924-8138943 MS.gene036559:intron 45.0%
! TGTCGAATTGGAAAGCGTAC+TGG - chr8.3:8137238-8137257 MS.gene036559:CDS 45.0%
!! AATCCCATGCTTGGTTTTCG+CGG - chr8.3:8139099-8139118 MS.gene036559:intron 45.0%
!! AAAAAAACAAAAATTATAAT+AGG - chr8.3:8136946-8136965 MS.gene036559:intron 5.0%
!! AAAAAACAAAAATTATAATA+GGG - chr8.3:8136947-8136966 MS.gene036559:intron 5.0%
AAATCCTCGCTTAATGCCGG+AGG + chr8.3:8138364-8138383 None:intergenic 50.0%
AAGGACAGAGACAAGTCCAG+AGG - chr8.3:8138015-8138034 MS.gene036559:intron 50.0%
ACAAGTCCAGAGGACATTGG+GGG - chr8.3:8138025-8138044 MS.gene036559:intron 50.0%
ACATGTGCCAAGTCACCTTC+AGG + chr8.3:8139003-8139022 None:intergenic 50.0%
AGCTGCACTAGTTGCTGATG+AGG - chr8.3:8139716-8139735 MS.gene036559:intron 50.0%
ATCTCGCTGAATGGATCCAC+CGG - chr8.3:8138307-8138326 MS.gene036559:CDS 50.0%
ATGTCTCGTGTTCTCCGTTC+AGG - chr8.3:8140498-8140517 MS.gene036559:intron 50.0%
CCTCCCACAAACCATTTGGT+AGG + chr8.3:8134971-8134990 None:intergenic 50.0%
GACAAGTCCAGAGGACATTG+GGG - chr8.3:8138024-8138043 MS.gene036559:intron 50.0%
GAGACAAGTCCAGAGGACAT+TGG - chr8.3:8138022-8138041 MS.gene036559:intron 50.0%
GCCTGCATCTCAGTCAATTC+TGG + chr8.3:8139304-8139323 None:intergenic 50.0%
GCCTGTGGTGTACCAATAAG+TGG + chr8.3:8139397-8139416 None:intergenic 50.0%
GCTGCAAAATCCCAGCAGAA+AGG + chr8.3:8139976-8139995 None:intergenic 50.0%
GGAGAATGGATCTCGCTGAA+TGG - chr8.3:8138298-8138317 MS.gene036559:CDS 50.0%
GGGAGCAAACTTGGCAGAAA+TGG - chr8.3:8134866-8134885 MS.gene036559:intron 50.0%
GGTACTTGACCAGAAAGGTG+TGG - chr8.3:8140241-8140260 MS.gene036559:intron 50.0%
GTTGGAATATGCGGAGAGCA+CGG - chr8.3:8140428-8140447 MS.gene036559:intron 50.0%
GTTGGCATCTTGACAGCTAG+AGG - chr8.3:8138061-8138080 MS.gene036559:intron 50.0%
TAACAGCGGGTGTTCACCTT+TGG - chr8.3:8134609-8134628 MS.gene036559:intron 50.0%
TCAGCAACTAGTGCAGCTCT+TGG + chr8.3:8139714-8139733 None:intergenic 50.0%
TCCGGCATTAAGCGAGGATT+TGG - chr8.3:8138363-8138382 MS.gene036559:intron 50.0%
TCCTTGTGCATGCCATTCCT+CGG + chr8.3:8137731-8137750 None:intergenic 50.0%
TGATGAAGTGGTTGCTGGGT+TGG - chr8.3:8136091-8136110 MS.gene036559:CDS 50.0%
TGCTGTTGTAGCTCGTGGAT+GGG - chr8.3:8138102-8138121 MS.gene036559:CDS 50.0%
TGGCCATTACGCAAGAACAG+AGG - chr8.3:8138857-8138876 MS.gene036559:CDS 50.0%
TGTGTCCATCATTCCAGGCA+TGG + chr8.3:8136051-8136070 None:intergenic 50.0%
TTTGCAGCATGACCCATTCG+AGG - chr8.3:8139988-8140007 MS.gene036559:CDS 50.0%
! CCTACCAAATGGTTTGTGGG+AGG - chr8.3:8134968-8134987 MS.gene036559:CDS 50.0%
! GCTGTTTCAGTGAGTCGCAA+TGG - chr8.3:8139343-8139362 MS.gene036559:intron 50.0%
!! GCTGGGTTGGCTTCAAAAAG+TGG - chr8.3:8136104-8136123 MS.gene036559:CDS 50.0%
ATAGACACAGAAGAGGGGCG+AGG + chr8.3:8135660-8135679 None:intergenic 55.0%
CACCAGAGCGAACAGAGACA+AGG + chr8.3:8135064-8135083 None:intergenic 55.0%
CAGCCGCGAAAACCAAGCAT+GGG + chr8.3:8139105-8139124 None:intergenic 55.0%
CATGCTGCTGTTGTAGCTCG+TGG - chr8.3:8138097-8138116 MS.gene036559:CDS 55.0%
CGGGTGTTCACCTTTGGCAA+AGG - chr8.3:8134615-8134634 MS.gene036559:intron 55.0%
CTCCTTGTCTCTGTTCGCTC+TGG - chr8.3:8135059-8135078 MS.gene036559:intron 55.0%
CTGCTGAAGATGCCGAGGAA+TGG - chr8.3:8137716-8137735 MS.gene036559:CDS 55.0%
CTGCTGTTGTAGCTCGTGGA+TGG - chr8.3:8138101-8138120 MS.gene036559:CDS 55.0%
GACTCACTGAAACAGCGGCT+TGG + chr8.3:8139339-8139358 None:intergenic 55.0%
GAGCGAACAGAGACAAGGAG+AGG + chr8.3:8135059-8135078 None:intergenic 55.0%
GCTGTTGTAGCTCGTGGATG+GGG - chr8.3:8138103-8138122 MS.gene036559:CDS 55.0%
GGCATCTTGACAGCTAGAGG+TGG - chr8.3:8138064-8138083 MS.gene036559:intron 55.0%
GGGAGGAAAGGGAGCAAACT+TGG - chr8.3:8134857-8134876 MS.gene036559:intron 55.0%
GTTCACTGCTGAAGATGCCG+AGG - chr8.3:8137711-8137730 MS.gene036559:CDS 55.0%
TAGACACAGAAGAGGGGCGA+GGG + chr8.3:8135659-8135678 None:intergenic 55.0%
TCCACCGGTGAGGTGATTCT+AGG - chr8.3:8138322-8138341 MS.gene036559:intron 55.0%
TCCTAGAATCACCTCACCGG+TGG + chr8.3:8138326-8138345 None:intergenic 55.0%
TTCTCCTCCGGCATTAAGCG+AGG - chr8.3:8138357-8138376 MS.gene036559:intron 55.0%
!! TGGGGAAAGTGTTGCGTGTC+TGG - chr8.3:8138121-8138140 MS.gene036559:CDS 55.0%
AGACACAGAAGAGGGGCGAG+GGG + chr8.3:8135658-8135677 None:intergenic 60.0%
AGGGGATGCAGGCAAACCAG+TGG + chr8.3:8137668-8137687 None:intergenic 60.0%
CTGGGAGGCCATCCATTGCA+CGG + chr8.3:8138939-8138958 None:intergenic 60.0%
GCAGCCGCGAAAACCAAGCA+TGG + chr8.3:8139106-8139125 None:intergenic 60.0%
GCCGAGGAATGGCATGCACA+AGG - chr8.3:8137727-8137746 MS.gene036559:intron 60.0%
GCTGAATGGATCCACCGGTG+AGG - chr8.3:8138312-8138331 MS.gene036559:intron 60.0%
GCTGCCGCAAGCCTAGCAAT+TGG + chr8.3:8140611-8140630 None:intergenic 60.0%
TGCATGCCCCCAATGTCCTC+TGG + chr8.3:8138034-8138053 None:intergenic 60.0%
! CTCTGTTCGCTCTGGTGCTG+CGG - chr8.3:8135067-8135086 MS.gene036559:intron 60.0%
! GGAATATGCGGAGAGCACGG+TGG - chr8.3:8140431-8140450 MS.gene036559:intron 60.0%
! GGGGGCATGCATTCAGCTGT+TGG - chr8.3:8138043-8138062 MS.gene036559:intron 60.0%
!! ACTGGTTTGCCTGCATCCCC+TGG - chr8.3:8137667-8137686 MS.gene036559:CDS 60.0%
!! TGCTTGGTTTTCGCGGCTGC+AGG - chr8.3:8139106-8139125 MS.gene036559:intron 60.0%
CATCCCCTGGAGCTGCGGTT+GGG - chr8.3:8137680-8137699 MS.gene036559:CDS 65.0%
ACAGAAGAGGGGCGAGGGGC+GGG + chr8.3:8135654-8135673 None:intergenic 70.0%
ACCGCAGCTCCAGGGGATGC+AGG + chr8.3:8137679-8137698 None:intergenic 70.0%
ACCTGCCCAACCGCAGCTCC+AGG + chr8.3:8137688-8137707 None:intergenic 70.0%
CACAGAAGAGGGGCGAGGGG+CGG + chr8.3:8135655-8135674 None:intergenic 70.0%
CCTGCCCAACCGCAGCTCCA+GGG + chr8.3:8137687-8137706 None:intergenic 70.0%
CTGCCCAACCGCAGCTCCAG+GGG + chr8.3:8137686-8137705 None:intergenic 70.0%
GCATCCCCTGGAGCTGCGGT+TGG - chr8.3:8137679-8137698 MS.gene036559:CDS 70.0%
GCCTGCATCCCCTGGAGCTG+CGG - chr8.3:8137675-8137694 MS.gene036559:CDS 70.0%
AGAAGAGGGGCGAGGGGCGG+GGG + chr8.3:8135652-8135671 None:intergenic 75.0%
CAGAAGAGGGGCGAGGGGCG+GGG + chr8.3:8135653-8135672 None:intergenic 75.0%
CCCTGGAGCTGCGGTTGGGC+AGG - chr8.3:8137684-8137703 MS.gene036559:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 8134289 8140646 8134289 ID=MS.gene036559
chr8.3 mRNA 8134289 8140646 8134289 ID=MS.gene036559.t1;Parent=MS.gene036559
chr8.3 exon 8140611 8140646 8140611 ID=MS.gene036559.t1.exon1;Parent=MS.gene036559.t1
chr8.3 CDS 8140611 8140646 8140611 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8140264 8140320 8140264 ID=MS.gene036559.t1.exon2;Parent=MS.gene036559.t1
chr8.3 CDS 8140264 8140320 8140264 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8139847 8140080 8139847 ID=MS.gene036559.t1.exon3;Parent=MS.gene036559.t1
chr8.3 CDS 8139847 8140080 8139847 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8138754 8138891 8138754 ID=MS.gene036559.t1.exon4;Parent=MS.gene036559.t1
chr8.3 CDS 8138754 8138891 8138754 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8138423 8138585 8138423 ID=MS.gene036559.t1.exon5;Parent=MS.gene036559.t1
chr8.3 CDS 8138423 8138585 8138423 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8138091 8138326 8138091 ID=MS.gene036559.t1.exon6;Parent=MS.gene036559.t1
chr8.3 CDS 8138091 8138326 8138091 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8137839 8137967 8137839 ID=MS.gene036559.t1.exon7;Parent=MS.gene036559.t1
chr8.3 CDS 8137839 8137967 8137839 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8137563 8137742 8137563 ID=MS.gene036559.t1.exon8;Parent=MS.gene036559.t1
chr8.3 CDS 8137563 8137742 8137563 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8137170 8137307 8137170 ID=MS.gene036559.t1.exon9;Parent=MS.gene036559.t1
chr8.3 CDS 8137170 8137307 8137170 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8136758 8136922 8136758 ID=MS.gene036559.t1.exon10;Parent=MS.gene036559.t1
chr8.3 CDS 8136758 8136922 8136758 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8136509 8136670 8136509 ID=MS.gene036559.t1.exon11;Parent=MS.gene036559.t1
chr8.3 CDS 8136509 8136670 8136509 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8136321 8136410 8136321 ID=MS.gene036559.t1.exon12;Parent=MS.gene036559.t1
chr8.3 CDS 8136321 8136410 8136321 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8135808 8136124 8135808 ID=MS.gene036559.t1.exon13;Parent=MS.gene036559.t1
chr8.3 CDS 8135808 8136124 8135808 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8135521 8135650 8135521 ID=MS.gene036559.t1.exon14;Parent=MS.gene036559.t1
chr8.3 CDS 8135521 8135650 8135521 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8135198 8135326 8135198 ID=MS.gene036559.t1.exon15;Parent=MS.gene036559.t1
chr8.3 CDS 8135198 8135326 8135198 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8134926 8135063 8134926 ID=MS.gene036559.t1.exon16;Parent=MS.gene036559.t1
chr8.3 CDS 8134926 8135063 8134926 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8134616 8134693 8134616 ID=MS.gene036559.t1.exon17;Parent=MS.gene036559.t1
chr8.3 CDS 8134616 8134693 8134616 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8134416 8134507 8134416 ID=MS.gene036559.t1.exon18;Parent=MS.gene036559.t1
chr8.3 CDS 8134416 8134507 8134416 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
chr8.3 exon 8134289 8134331 8134289 ID=MS.gene036559.t1.exon19;Parent=MS.gene036559.t1
chr8.3 CDS 8134289 8134331 8134289 ID=cds.MS.gene036559.t1;Parent=MS.gene036559.t1
Gene Sequence

>MS.gene036559

ATGGTGGCTGTTTATGATTCTGGCAATAGCAACAAGGTCGTTGTTTCATTTGTTCTTGTAGTCACTTATTGTCATTTTTTCGATACAAAATGTCTTACATTAATGAGATTATAAAAGAGTTGGTAAGGATGTGTCTAATACAATTATGATTTCCAAAAGGTACATTGATCAGTTCTAAGATAGTCAAATTTTGAAGGATTAAGCAACACACTAAACTGGTATACTTGTAGAGACTAAAATAAAAAACATTACGGACATTAAAAGCAAAACATTGTATACTTGCAAGGATGAAAAAGTGATATTCTTCTGTCTTTCTGTTTTAACAGCGGGTGTTCACCTTTGGCAAAGGTAGAAGTGATGGAAACAAAGCAATGAAGTCCTTGGTAAGCATTCTTTATCTATTCATAATAAGCATTTTTAAACTAACTCAAATTGATTTCTCTCATTCATGTTCACTTAGCTAGCATGCTAAAACACTAAACACAATATGGCAAAACAAGGCTATTTGATTTTTCATGTAACAACTAATTTTTATTCCTTTGAATTGCTGCTTTCTTTATGTGTAGTTGGGAGGAAAGGGAGCAAACTTGGCAGAAATGGCAACAATTGGATTATCTGTGCCTCCTGGACTCACTATATCAACCGAAGCATGTCGAGAATATCAACAAAATGTGAAGAACCTACCAAATGGTTTGTGGGAGGAGATACTTGAAGGTCTTAATTTTGTGCAAAATGAAATGGGGGCCTTTCTTGGGAATCCTTTAAAACCTCTCCTTGTCTCTGTTCGCTCTGGTGCTGCGGTAAGAGCCTATTCCTTATATTTCACTTTGTCCCAACACTTGATTGAATTGGGTTATCTGAGCTTATTCATATGCGTAATGCATAAGCATTGGTGACACTTTTTGGGAAAGCTTATAGAAACATCTTATGACATGTCCATTATTTGTCATAAGATGTTTTCATAAGTTCTCTATGTTAGCTCATGAAAACATGCTTATATCTTATATGCACTTAATAGTGTGATTTTGCTATAAGCACTTAATTAACTTTGTTATCCAAACAATGAGTGTTTCAACCTCTGATCACATTTAAGGTCACCTTTATTATGTCATGTGTAAAGGAACTAGAAAAATGGTATAAGGTTTATGTTAGAACAACAATTAGTAACAAATGATTAAAGAAATCGCAAACAATGGAACACGATCATTTGTTTCCGTTGTTTGGCCAATTTTATCTACCGCTATGATTATATAGCAAATATAGTTTCATATATTACTGAAGTGAAGTAGGGCTTACAATGTCACAAGCCATATATATAGTACTAGTGGAGGGAGCTTTGCAACGCTTCGCTAGCTCAACTCCCCCGCCCCTCGCCCCTCTTCTGTGTCTATATGTGAGCCATACTCAACGGTTTATATACTGAAGAAGGAAAGTAACGCAACTTAGGATTTATATAAGAAAAATGTACATATATTATAGTATTGCTTAGCTCAATTTAGGATGTATATTCCAGGTTTTTAACTTCAAGTTATTGATTTAAATAGTGAATAACATTTTCTCTAAATCTTAAAAGAGTTAAAGAAGTAAATTACAAAATTTATTTGTTTTGATTGTTTAAAGTTCCACTTGAAAACTGAAAAGTTCCATTGAATTTATAGGTGTACGTATTTTTGTCTGATTTAAATTTGATTCCTTTTATGGTTGTATTTAGCATGTTTATAGCATAAAGTTGTTTGTTTCCTCTACATCTATCAGATTTCCATGCCTGGAATGATGGACACAGTTCTTAATCTTGGATTGAATGATGAAGTGGTTGCTGGGTTGGCTTCAAAAAGTGGAGAGCGGTTTGCTTATGATTCTTATAGACGTTTCTTAGACATGTTTGGAAATGTTGTAAGTATTTCTCTTATATCATACGAACAAAATTGCATTTCGTCCGCAACACTTCTCTAAGCAATAATTGTCATTTAAAATATCTATCCAATACACTTCCTCAATGAACGTCATCTTTTAGTATCTTCCATTGATTTGGTTGAAACTTTTATTGTATGTTATACTTAGGTAATGGACATTCCACACTCATTGTTTGAGGACAAGTTAGAAAAGCTAAAGCAATCAAAAGGCATTAAACATGACACAGGTCTATCAGCCAATGATCTCAAAAATTTGGTTGAGCAGTACAAGAATGTCTATGTTGAAGCTAAGGGAGAAAAGTTTCCCTCAGGTGCTAACTTCAACACTATCAAATTCTTCATGTTTTGTTGTTATACATTCTTAGTGTAATCCATCCACAAACCCTCTCTTGATTTATCAATTGCAGATCCAAAGAAGCAACTAGAATTAGCTGTTAAAGCCGTTTTCAACTCTTGGGATAGTCCAAGGGCTATTAAGTATCGAAACATTAATCAGATAACTGGGCTAATGGGCACTGCTGTGAATATTCAATCTATGGTGTTTGGTAATATGGGAAATACTTCAGGAACTGGTGTTCTGTTCACTAGAAATCCAAGCACTGGTGAAAAGAAACTTTATGGAGAGTTTCTCACTAATGCTCAGGTTATATATAATATGATTTACTAGTTGTTATTTTGCAATACCCATGTCACTATGATTTGTATTTAGTAGTAAATTAATAACTACTTTGCTGATGTTTCAACAAAAAAACAAAAATTATAATAGGGAGAAGATGTAGTTGCTGGAATCAGGACACCTGAAGTTCTAGAGACCATGAAAACTTGCATGCCAGATGCTTATAAGGAACTTGAGGAGAATTGTAAAATTCTTGAGAATCACTACAAGGATATGATGGTGAAAGTTTCAATCTCTTTAGATATGTTTTACTGTTTTTGCATTGTTTATATCAAAAGACTGACATGCAATTCTCAAATTGAAATGATATTGTAGGATATTGAGTTCACTGTTCAAGAAAATAGATTGTGGATGTTGCAATGTCGAATTGGAAAGCGTACTGGTAAAGGTGCAATCAAAATAGCTACAGACATGGTCAATGAGGGGCTTGCTGATATTCGTTCTGCAATCAAGATGGTAGAGCCACAACATCTTAATCAGTTCCTACATCCACAGGTATATACATTGTTGTAATTAACGTAATCCATGTACGGTTTTCCTTTAACTTTCTTTTGTAAATAATGCACTGATTATAAAAGGATAGTGATCATTTTGCTAAATAATGCACGGTTTTATTTTGTTTGATGACTGATTATATAGTGTTTGATGATTGATATGTACATTTATTTCCATTTATTTATTTTTCATTAACTTTTCATTTCAAATGTAAGATGCGCAAGTTTATTGATTGCTTTTAGTTTATTTGTTTAGTTTGAGGATCCATCTAAGTACAAGAACAAAGTGGTTGCCACTGGTTTGCCTGCATCCCCTGGAGCTGCGGTTGGGCAGGTTGTGTTCACTGCTGAAGATGCCGAGGAATGGCATGCACAAGGAAAGAGTGCAATTTTGGTATTCTTTTTCATTCTCAAAGCCATCATTTTCCTTTTCTCTTTTTTTCCCCTTCATTATATCCAATGTCTTAAAGTTTTGAATGAGTATCAATCCATTTGTGTTTGGTCTCTTAGCCCATCATAGAGATCAAACCAGTATGTATAAAGTATCTCTATATAATGTCCTAGATTTAGTTTCATGACTAGGTTAAAGAAATAATTAAGAAGCAATCATTAAATTCTAATACATACTTGCATTATTAAAGGTAAGGACAGAGACAAGTCCAGAGGACATTGGGGGCATGCATTCAGCTGTTGGCATCTTGACAGCTAGAGGTGGTATGACATCTCATGCTGCTGTTGTAGCTCGTGGATGGGGAAAGTGTTGCGTGTCTGGTTGCTCCAATATTGAAGTAAACGAGTCTAGAAAGGTAACCTCCTATATTATTGACAAATTAGTAAAAGATCTTCTTCATGTTCAAATAATCCAGTATAATAATATCCATTTATGATGATAGGTGGTTGTAATTGGGGATATGGTAATATCAGAAGGAGAATGGATCTCGCTGAATGGATCCACCGGTGAGGTGATTCTAGGAAAGCAAGCACTTTCTCCTCCGGCATTAAGCGAGGATTTGGAAACTTTCATGTCTTGGGCTGATCAAATAAGGAAGCTGAAGGTGCTGCTGTGTATTCTTTATTAGCTACAGAAGTTGAGTTGAATCAAAACATTTAATTTGTGTTCCGTAATTTCACTCATATCATTGTTGTGTATCAGGTTTTGGCAAATGCTGACACACCTGAAGATGCAATAACAGCTAGAAGAAATGGTGCACAAGGAATTGGACTTTGCAGGACTGAACACATGGTATAAATAATTTTCAACTCGTTGTTATAACTAACTGAAAACTGTGAATGCACTAAAATTTAAAAGGCTTGTATTGTGGTTTTGTTATAACAAGTTTTAGCATTGCTTTTTGAAATAAAAAGAAAAAACACTCATGTAGAGTGAGCATAAGATAAAAATGATCCTCTTTATATGCTATAAGTTTGGTGTGTTTTAGTTTTTTGCTTCAGATGAAAGGCTAAAGGCTGTGAGAAGGATGATAATGGCCATTACGCAAGAACAGAGGAAAGCTGCACTTGAAATGTTGTTACCTTATCAACAATCAGATTTTGAGGGAATTTTCCGTGCAATGGATGGCCTCCCAGTAACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCTGAAGGTGACTTGGCACATGTTGTCAGTGAACTAACTTCTCAGACAGGCATGAAAGAAGCAGAAATATTCTCTAGGATTGAAAAACTCTCTGAGGTTAATCCCATGCTTGGTTTTCGCGGCTGCAGGTTTGTCCTCCTCTTAATATGATGCTTGCGTGTAATAAATAACTATCACATGACTGATGTTTAGTTTGGAAATTCCAAGTTCATAATTTATCAGTAGGTATCAAACTCGTTGCCCTATGATTTACTGATGTTTGACAATTTGTAATCATGTGAACAGGCTGGGAATATCATATCCAGAATTGACTGAGATGCAGGCTCGTGCAATCTTCCAAGCCGCTGTTTCAGTGAGTCGCAATGGTATTGTAGTTCTACCAGAGATAATGGTTCCACTTATTGGTACACCACAGGCATGTTCCTTTTTCTTACTTAATCTTTAGTTATTTCTCCGATTTGTTTCACATCTATCATGTATGTGTAAGATTATGACGAAAATTCAGAATGTTTTCTCTCGAAATATAACATGAAGCAGCATTTTTTGGTTCGATCTTAATAAAAATCTTGACATAATTATTATACAAGCCCAATACTCTTTAACTAGCAGGAATTAAGACATCAAGTGAGTTTAATAAGGAACGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCTTCTCTAAGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCACTAGTTGCTGATGAGGTAATACTTATACTTCTCTTTGTCTTGAAGATGTACGCTTGAATTTTAACATACAATAATAAAAATGTGTTATTAGAGAAAAAACAATATTTTGTCCTCTTTACACTTTCTAATTTTATAATCCATTTGTGTAGATTGCAAATGAAGCAGATTTTTTTTCATTCGGAACCAATGACCTTACCCAAATGACATTTGGCTACAGTAGAGATGATGTTGGAAAATTTCTTCCTTCATACCTTTCTGCTGGGATTTTGCAGCATGACCCATTCGAGGTTAGTTGCATAGTTGTGTGGTGTGTGATTTCTGGAATCGAAAATTTTGCACTGTTGTGTGTAAAAATAACCCACACGACTCTCTATTCAAACTTCTTGAAACAACAATAATAAAATACCATTACTTTTATCGTTATTTCCATTATTGCATAGTTGGTGCGATGGTGCATTTTACCTTTTCTTAATATATAAAGTATGTTTGCTAAATTCACATTATTGACAACAATTACAGGTACTTGACCAGAAAGGTGTGGGTCAACTAATCAAAATGTGCACAGAAAAGGGTCGTACTGCTAAACCAAATTTGAAGGTAACTTAACAATACAAATTTCAACAGCAAAATTTGATCACACATCTTGGTTATTCTTAATATGGTATTTAAACACTACTGTAAATGATTAATTACGTTGATTATCAGGTTGGAATATGCGGAGAGCACGGTGGCGAGCCGTCTTCTATTGCATTCTTTGCTCAACTTGGACTTGATTATGTCTCGTGTTCTCCGTTCAGGTTAGATTTTTGGTTCAAAGTTGTATGAAATGAGACATTTGTATTTTTAGTAGTCAAATTGAAAATTTGAGGACTCTTTTGCAGGATTCCAATTGCTAGGCTTGCGGCAGCTCAAGTTGCAGTGTGA
Protein sequence

>MS.gene036559.t1

MVAVYDSGNSNKRVFTFGKGRSDGNKAMKSLLGGKGANLAEMATIGLSVPPGLTISTEACREYQQNVKNLPNGLWEEILEGLNFVQNEMGAFLGNPLKPLLVSVRSGAAISMPGMMDTVLNLGLNDEVVAGLASKSGERFAYDSYRRFLDMFGNVVMDIPHSLFEDKLEKLKQSKGIKHDTGLSANDLKNLVEQYKNVYVEAKGEKFPSDPKKQLELAVKAVFNSWDSPRAIKYRNINQITGLMGTAVNIQSMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLTNAQGEDVVAGIRTPEVLETMKTCMPDAYKELEENCKILENHYKDMMDIEFTVQENRLWMLQCRIGKRTGKGAIKIATDMVNEGLADIRSAIKMVEPQHLNQFLHPQFEDPSKYKNKVVATGLPASPGAAVGQVVFTAEDAEEWHAQGKSAILVRTETSPEDIGGMHSAVGILTARGGMTSHAAVVARGWGKCCVSGCSNIEVNESRKVVVIGDMVISEGEWISLNGSTGEVILGKQALSPPALSEDLETFMSWADQIRKLKVLANADTPEDAITARRNGAQGIGLCRTEHMFFASDERLKAVRRMIMAITQEQRKAALEMLLPYQQSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLAHVVSELTSQTGMKEAEIFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSVSRNGIVVLPEIMVPLIGTPQELRHQVSLIRNVAEKVFSEMGSSLSYKVGTMIEVPRAALVADEIANEADFFSFGTNDLTQMTFGYSRDDVGKFLPSYLSAGILQHDPFEVLDQKGVGQLIKMCTEKGRTAKPNLKVGICGEHGGEPSSIAFFAQLGLDYVSCSPFRIPIARLAAAQVAV