Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036823.t1 | XP_003609267.2 | 97.9 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 8.10E-84 | 319.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036823.t1 | G7JVA8 | 97.9 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 5.9e-84 | 319.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036823 | MS.gene32612 | PPI |
| MS.gene036823 | MS.gene072918 | PPI |
| MS.gene036823 | MS.gene014815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036823.t1 | MTR_4g113840 | 97.857 | 140 | 3 | 0 | 30 | 169 | 1 | 140 | 4.35e-99 | 282 |
| MS.gene036823.t1 | MTR_2g054750 | 71.429 | 140 | 28 | 1 | 30 | 169 | 1 | 128 | 2.10e-70 | 209 |
| MS.gene036823.t1 | MTR_4g011190 | 47.552 | 143 | 60 | 3 | 35 | 164 | 5 | 145 | 1.45e-39 | 131 |
| MS.gene036823.t1 | MTR_3g107610 | 43.396 | 159 | 58 | 5 | 35 | 164 | 5 | 160 | 7.73e-31 | 110 |
| MS.gene036823.t1 | MTR_3g107610 | 40.580 | 138 | 50 | 5 | 35 | 143 | 5 | 139 | 3.40e-20 | 82.8 |
| MS.gene036823.t1 | MTR_6g069400 | 30.216 | 139 | 75 | 4 | 25 | 163 | 260 | 376 | 5.13e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036823.t1 | AT2G26695 | 67.143 | 140 | 43 | 2 | 30 | 168 | 1 | 138 | 3.75e-69 | 206 |
| MS.gene036823.t1 | AT2G26695 | 67.143 | 140 | 43 | 2 | 30 | 168 | 1 | 138 | 3.75e-69 | 206 |
| MS.gene036823.t1 | AT3G15680 | 42.857 | 154 | 65 | 5 | 35 | 165 | 5 | 158 | 3.25e-34 | 118 |
| MS.gene036823.t1 | AT3G15680 | 42.857 | 154 | 65 | 5 | 35 | 165 | 5 | 158 | 3.25e-34 | 118 |
| MS.gene036823.t1 | AT5G25490 | 37.888 | 161 | 71 | 4 | 35 | 166 | 5 | 165 | 9.63e-31 | 109 |
| MS.gene036823.t1 | AT5G25490 | 37.888 | 161 | 71 | 4 | 35 | 166 | 5 | 165 | 9.63e-31 | 109 |
| MS.gene036823.t1 | AT2G17975 | 32.886 | 149 | 70 | 5 | 35 | 159 | 7 | 149 | 1.33e-14 | 69.7 |
Find 44 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGGGTATCCACAATTT+TGG | 0.191501 | 8.1:+12704795 | None:intergenic |
| GATCATTATTCTTCTGGATA+TGG | 0.206689 | 8.1:-12704635 | MS.gene036823:CDS |
| TTTAAAGATCATTATTCTTC+TGG | 0.213538 | 8.1:-12704641 | MS.gene036823:CDS |
| TGCAAAATGCCAAGGGATTA+TGG | 0.258203 | 8.1:-12703901 | MS.gene036823:intron |
| TTCAGTCCTGTTATATCTAT+AGG | 0.338196 | 8.1:+12704751 | None:intergenic |
| ATCATTATTCTTCTGGATAT+GGG | 0.365982 | 8.1:-12704634 | MS.gene036823:CDS |
| AATTGTGGATACCCAAAGTA+TGG | 0.373044 | 8.1:-12704791 | MS.gene036823:CDS |
| TATCTATAGGTTGATGGGTC+AGG | 0.380599 | 8.1:+12704764 | None:intergenic |
| GGTCAGGGCCTCCATACTTT+GGG | 0.383448 | 8.1:+12704780 | None:intergenic |
| GGGTCAGGGCCTCCATACTT+TGG | 0.410327 | 8.1:+12704779 | None:intergenic |
| AACAGGAAAATGAGCTGGTC+TGG | 0.419264 | 8.1:-12704875 | MS.gene036823:intron |
| ATGGTGAGTTCTGGAGGATA+TGG | 0.428894 | 8.1:-12704605 | MS.gene036823:CDS |
| CATCAACCTATAGATATAAC+AGG | 0.431667 | 8.1:-12704757 | MS.gene036823:CDS |
| CTGTTATATCTATAGGTTGA+TGG | 0.432543 | 8.1:+12704758 | None:intergenic |
| CTGAAACGTTGGCAGGGGAC+TGG | 0.496040 | 8.1:-12704733 | MS.gene036823:CDS |
| ACCAGTTGAAAGACCTATTG+TGG | 0.504479 | 8.1:+12705555 | None:intergenic |
| AACAGGACTGAAACGTTGGC+AGG | 0.506879 | 8.1:-12704740 | MS.gene036823:CDS |
| TTATTCATACTCTTCTTCAA+AGG | 0.512519 | 8.1:-12705430 | MS.gene036823:intron |
| TGAGCTGGTCTGGAGGAGAT+TGG | 0.515298 | 8.1:-12704865 | MS.gene036823:CDS |
| TGTTATATCTATAGGTTGAT+GGG | 0.518610 | 8.1:+12704759 | None:intergenic |
| CCCACAATAGGTCTTTCAAC+TGG | 0.530285 | 8.1:-12705556 | MS.gene036823:intron |
| CACATCTATAGCAGTTTGAT+CGG | 0.536065 | 8.1:+12704669 | None:intergenic |
| ATCTATAGGTTGATGGGTCA+GGG | 0.537334 | 8.1:+12704765 | None:intergenic |
| CAGGATGGAAAAGTGGAGAC+TGG | 0.542885 | 8.1:-12704562 | MS.gene036823:CDS |
| TCATTATTCTTCTGGATATG+GGG | 0.550458 | 8.1:-12704633 | MS.gene036823:CDS |
| CCAGTTGAAAGACCTATTGT+GGG | 0.553725 | 8.1:+12705556 | None:intergenic |
| GCTATAAATGCAAAATGCCA+AGG | 0.555528 | 8.1:-12703909 | MS.gene036823:CDS |
| AGGAAAATGAGCTGGTCTGG+AGG | 0.557211 | 8.1:-12704872 | MS.gene036823:CDS |
| GTGGAGACTGGATTTGCCCT+AGG | 0.558224 | 8.1:-12704550 | MS.gene036823:intron |
| AGAGAAGCATGCCAAAATTG+TGG | 0.558332 | 8.1:-12704806 | MS.gene036823:CDS |
| GGTAACATGGTGAGTTCTGG+AGG | 0.561232 | 8.1:-12704611 | MS.gene036823:CDS |
| ACAGGACTGAAACGTTGGCA+GGG | 0.573031 | 8.1:-12704739 | MS.gene036823:CDS |
| ATATAACAGGACTGAAACGT+TGG | 0.578735 | 8.1:-12704744 | MS.gene036823:CDS |
| CAATGAACAGGAAAATGAGC+TGG | 0.583001 | 8.1:-12704880 | MS.gene036823:intron |
| CAGGACTGAAACGTTGGCAG+GGG | 0.599861 | 8.1:-12704738 | MS.gene036823:CDS |
| CATTATTCTTCTGGATATGG+GGG | 0.604836 | 8.1:-12704632 | MS.gene036823:CDS |
| GAATGCATAATTATGCAAGC+AGG | 0.627959 | 8.1:-12703939 | MS.gene036823:CDS |
| CGATCAAACTGCTATAGATG+TGG | 0.635461 | 8.1:-12704668 | MS.gene036823:CDS |
| TGATGAAGCAGAATTGGCTG+TGG | 0.639985 | 8.1:-12703961 | MS.gene036823:intron |
| CTATAAATGCAAAATGCCAA+GGG | 0.640939 | 8.1:-12703908 | MS.gene036823:CDS |
| TCTGGAGGAGATTGGATGTG+TGG | 0.641624 | 8.1:-12704857 | MS.gene036823:CDS |
| TGTGGATACCCAAAGTATGG+AGG | 0.657966 | 8.1:-12704788 | MS.gene036823:CDS |
| CAGTTGAAAGACCTATTGTG+GGG | 0.686483 | 8.1:+12705557 | None:intergenic |
| AGTTGAAAGACCTATTGTGG+GGG | 0.713227 | 8.1:+12705558 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTCATTATTTTTTTTAT+AGG | + | chr8.1:12704273-12704292 | None:intergenic | 10.0% |
| !!! | TTTTCCAAAAATAATAATAA+TGG | - | chr8.1:12705223-12705242 | MS.gene036823:intron | 10.0% |
| !! | AATGATTAAGATTAAGAATA+AGG | - | chr8.1:12705164-12705183 | MS.gene036823:intron | 15.0% |
| !! | GTTATTTACTTTATACTTAT+TGG | + | chr8.1:12704022-12704041 | None:intergenic | 15.0% |
| !!! | ATCACCATTATTATTATTTT+TGG | + | chr8.1:12705230-12705249 | None:intergenic | 15.0% |
| !!! | TCTTAATCTTAATCATTTTA+TGG | + | chr8.1:12705161-12705180 | None:intergenic | 15.0% |
| !!! | TGGTAAATTTTAAGATATTT+AGG | + | chr8.1:12704407-12704426 | None:intergenic | 15.0% |
| !! | AAAACAAAGATACTCAAATT+AGG | + | chr8.1:12705338-12705357 | None:intergenic | 20.0% |
| !! | AAACAAAGATACTCAAATTA+GGG | + | chr8.1:12705337-12705356 | None:intergenic | 20.0% |
| !! | TATTTGTGCAAATAACTTAA+TGG | - | chr8.1:12704089-12704108 | MS.gene036823:intron | 20.0% |
| !! | TCATAACTCATAACTTATAA+AGG | - | chr8.1:12704145-12704164 | MS.gene036823:intron | 20.0% |
| !! | TTATTACTATTGTTTGTTTC+AGG | - | chr8.1:12705549-12705568 | MS.gene036823:intron | 20.0% |
| !! | TTTAAAGATCATTATTCTTC+TGG | - | chr8.1:12704681-12704700 | MS.gene036823:CDS | 20.0% |
| !!! | TGCACAAATAAATATAGTTT+TGG | + | chr8.1:12704079-12704098 | None:intergenic | 20.0% |
| !!! | TTAAGAATGGTTTGTAAATT+AGG | + | chr8.1:12703829-12703848 | None:intergenic | 20.0% |
| ! | AATATGTCAACTGTCATAAA+AGG | - | chr8.1:12704958-12704977 | MS.gene036823:intron | 25.0% |
| ! | AATGTTAGTATGTTAGTTGT+TGG | + | chr8.1:12704248-12704267 | None:intergenic | 25.0% |
| ! | ATCATTATTCTTCTGGATAT+GGG | - | chr8.1:12704688-12704707 | MS.gene036823:CDS | 25.0% |
| ! | GCAATCTCTTTATTAATCAA+AGG | + | chr8.1:12704912-12704931 | None:intergenic | 25.0% |
| ! | TAGAGATGGTTATATATCAT+TGG | - | chr8.1:12705515-12705534 | MS.gene036823:intron | 25.0% |
| ! | TCAATATAAACAAGTTCAGT+TGG | - | chr8.1:12705264-12705283 | MS.gene036823:intron | 25.0% |
| ! | TTATTCATACTCTTCTTCAA+AGG | - | chr8.1:12703892-12703911 | MS.gene036823:intron | 25.0% |
| ! | TTGCTATAGTAGTTTAAGAA+TGG | + | chr8.1:12703842-12703861 | None:intergenic | 25.0% |
| ! | TTTATACTTATTGGAGTTTC+AGG | + | chr8.1:12704013-12704032 | None:intergenic | 25.0% |
| !! | TATGACAGTTGACATATTTT+TGG | + | chr8.1:12704956-12704975 | None:intergenic | 25.0% |
| !! | TGTGTCTTTTAATATAAGCA+GGG | - | chr8.1:12704121-12704140 | MS.gene036823:intron | 25.0% |
| !!! | TGTTATATCTATAGGTTGAT+GGG | + | chr8.1:12704566-12704585 | None:intergenic | 25.0% |
| AAAGATACTCAAATTAGGGA+AGG | + | chr8.1:12705333-12705352 | None:intergenic | 30.0% | |
| AAGATAATGTGAACTAACCT+AGG | + | chr8.1:12704792-12704811 | None:intergenic | 30.0% | |
| AAGATACTCAAATTAGGGAA+GGG | + | chr8.1:12705332-12705351 | None:intergenic | 30.0% | |
| AAGGAAGATTTGATAAGCTA+AGG | - | chr8.1:12704164-12704183 | MS.gene036823:intron | 30.0% | |
| AGATAATGTGAACTAACCTA+GGG | + | chr8.1:12704791-12704810 | None:intergenic | 30.0% | |
| CATCAACCTATAGATATAAC+AGG | - | chr8.1:12704565-12704584 | MS.gene036823:CDS | 30.0% | |
| CTATAAATGCAAAATGCCAA+GGG | - | chr8.1:12705414-12705433 | MS.gene036823:intron | 30.0% | |
| GAGAAGGATAGGATTATAAT+CGG | - | chr8.1:12705071-12705090 | MS.gene036823:intron | 30.0% | |
| GATAATTACAATACAGACAG+TGG | - | chr8.1:12705195-12705214 | MS.gene036823:intron | 30.0% | |
| GATCATTATTCTTCTGGATA+TGG | - | chr8.1:12704687-12704706 | MS.gene036823:CDS | 30.0% | |
| GTTTCATTCATCTTGAAACT+AGG | - | chr8.1:12703984-12704003 | MS.gene036823:intron | 30.0% | |
| TCATTATTCTTCTGGATATG+GGG | - | chr8.1:12704689-12704708 | MS.gene036823:CDS | 30.0% | |
| TTACTATTGTTTGTTTCAGG+CGG | - | chr8.1:12705552-12705571 | MS.gene036823:intron | 30.0% | |
| TTATAATCCTATCCTTCTCT+CGG | + | chr8.1:12705070-12705089 | None:intergenic | 30.0% | |
| TTCAGTCCTGTTATATCTAT+AGG | + | chr8.1:12704574-12704593 | None:intergenic | 30.0% | |
| TTTATGTGATGAAGCAGAAT+TGG | - | chr8.1:12705355-12705374 | MS.gene036823:intron | 30.0% | |
| ! | AATAATGGTGATGATACAGA+CGG | - | chr8.1:12705238-12705257 | MS.gene036823:intron | 30.0% |
| ! | AGTTTTCATATCTCAAAACC+TGG | + | chr8.1:12704218-12704237 | None:intergenic | 30.0% |
| ! | CTGAGAAAAAACACTTTTAG+AGG | + | chr8.1:12704886-12704905 | None:intergenic | 30.0% |
| ! | CTGTTATATCTATAGGTTGA+TGG | + | chr8.1:12704567-12704586 | None:intergenic | 30.0% |
| ! | GTGTCTTTTAATATAAGCAG+GGG | - | chr8.1:12704122-12704141 | MS.gene036823:intron | 30.0% |
| ! | GTGTGTCTTTTAATATAAGC+AGG | - | chr8.1:12704120-12704139 | MS.gene036823:intron | 30.0% |
| !! | CACTATATGTTACTTTGCAA+GGG | + | chr8.1:12705097-12705116 | None:intergenic | 30.0% |
| !! | TCACTATATGTTACTTTGCA+AGG | + | chr8.1:12705098-12705117 | None:intergenic | 30.0% |
| AAGACAGATGATACGTCTAA+AGG | + | chr8.1:12705461-12705480 | None:intergenic | 35.0% | |
| AATTGTGGATACCCAAAGTA+TGG | - | chr8.1:12704531-12704550 | MS.gene036823:intron | 35.0% | |
| AGACAGATGATACGTCTAAA+GGG | + | chr8.1:12705460-12705479 | None:intergenic | 35.0% | |
| AGTTTGATGCTTATGTTGTG+AGG | + | chr8.1:12703801-12703820 | None:intergenic | 35.0% | |
| ATATAACAGGACTGAAACGT+TGG | - | chr8.1:12704578-12704597 | MS.gene036823:CDS | 35.0% | |
| CACATCTATAGCAGTTTGAT+CGG | + | chr8.1:12704656-12704675 | None:intergenic | 35.0% | |
| CATTATTCTTCTGGATATGG+GGG | - | chr8.1:12704690-12704709 | MS.gene036823:CDS | 35.0% | |
| GAATGCATAATTATGCAAGC+AGG | - | chr8.1:12705383-12705402 | MS.gene036823:intron | 35.0% | |
| GCTATAAATGCAAAATGCCA+AGG | - | chr8.1:12705413-12705432 | MS.gene036823:intron | 35.0% | |
| ! | ACTTTGGGTATCCACAATTT+TGG | + | chr8.1:12704530-12704549 | None:intergenic | 35.0% |
| ! | TGCTTTCATGACAGAGTATT+CGG | - | chr8.1:12704049-12704068 | MS.gene036823:intron | 35.0% |
| ! | TTTTGCACTTCTATGAACTG+CGG | - | chr8.1:12704612-12704631 | MS.gene036823:CDS | 35.0% |
| !! | GAATTTTAAGTAGCACATCC+AGG | - | chr8.1:12704197-12704216 | MS.gene036823:intron | 35.0% |
| !! | TGAGTACTGATAGAACTTTG+TGG | - | chr8.1:12704821-12704840 | MS.gene036823:CDS | 35.0% |
| !!! | AAGAGTGCAGTATTTTTTGC+AGG | - | chr8.1:12705129-12705148 | MS.gene036823:intron | 35.0% |
| AATTCCAGGCTACATACACA+GGG | - | chr8.1:12704343-12704362 | MS.gene036823:intron | 40.0% | |
| ACCAGTTGAAAGACCTATTG+TGG | + | chr8.1:12703770-12703789 | None:intergenic | 40.0% | |
| AGTTGAAAGACCTATTGTGG+GGG | + | chr8.1:12703767-12703786 | None:intergenic | 40.0% | |
| CAATGAACAGGAAAATGAGC+TGG | - | chr8.1:12704442-12704461 | MS.gene036823:intron | 40.0% | |
| CACATGTTTCCACAATGAAC+AGG | - | chr8.1:12704430-12704449 | MS.gene036823:intron | 40.0% | |
| CAGTTGAAAGACCTATTGTG+GGG | + | chr8.1:12703768-12703787 | None:intergenic | 40.0% | |
| CATTGTGGAAACATGTGAAG+TGG | + | chr8.1:12704427-12704446 | None:intergenic | 40.0% | |
| CCAGTTGAAAGACCTATTGT+GGG | + | chr8.1:12703769-12703788 | None:intergenic | 40.0% | |
| CGATCAAACTGCTATAGATG+TGG | - | chr8.1:12704654-12704673 | MS.gene036823:CDS | 40.0% | |
| TGCAAAATGCCAAGGGATTA+TGG | - | chr8.1:12705421-12705440 | MS.gene036823:intron | 40.0% | |
| ! | AGAGAAGCATGCCAAAATTG+TGG | - | chr8.1:12704516-12704535 | MS.gene036823:intron | 40.0% |
| ! | CTTTTCTCACCATAATCCCT+TGG | + | chr8.1:12705433-12705452 | None:intergenic | 40.0% |
| ! | GCTCATTTTCCTGTTCATTG+TGG | + | chr8.1:12704442-12704461 | None:intergenic | 40.0% |
| ! | GTCAAGCTGTTCTTTAGAGA+TGG | - | chr8.1:12705501-12705520 | MS.gene036823:intron | 40.0% |
| !! | ATCTATAGGTTGATGGGTCA+GGG | + | chr8.1:12704560-12704579 | None:intergenic | 40.0% |
| !! | TATCTATAGGTTGATGGGTC+AGG | + | chr8.1:12704561-12704580 | None:intergenic | 40.0% |
| AACAGGAAAATGAGCTGGTC+TGG | - | chr8.1:12704447-12704466 | MS.gene036823:intron | 45.0% | |
| AATTCCCTGTGTATGTAGCC+TGG | + | chr8.1:12704350-12704369 | None:intergenic | 45.0% | |
| CAATTCCAGGCTACATACAC+AGG | - | chr8.1:12704342-12704361 | MS.gene036823:intron | 45.0% | |
| CCCACAATAGGTCTTTCAAC+TGG | - | chr8.1:12703766-12703785 | MS.gene036823:intron | 45.0% | |
| CTGTGTATGTAGCCTGGAAT+TGG | + | chr8.1:12704344-12704363 | None:intergenic | 45.0% | |
| TAATCCTATCCTTCTCTCGG+AGG | + | chr8.1:12705067-12705086 | None:intergenic | 45.0% | |
| TGATGAAGCAGAATTGGCTG+TGG | - | chr8.1:12705361-12705380 | MS.gene036823:intron | 45.0% | |
| TGTGGATACCCAAAGTATGG+AGG | - | chr8.1:12704534-12704553 | MS.gene036823:intron | 45.0% | |
| TTCTGGATATGGGGGTAACA+TGG | - | chr8.1:12704698-12704717 | MS.gene036823:CDS | 45.0% | |
| ! | AATGGTGATGATACAGACGG+TGG | - | chr8.1:12705241-12705260 | MS.gene036823:intron | 45.0% |
| !! | AGTCTCCACTTTTCCATCCT+GGG | + | chr8.1:12704761-12704780 | None:intergenic | 45.0% |
| !! | ATGGTGAGTTCTGGAGGATA+TGG | - | chr8.1:12704717-12704736 | MS.gene036823:CDS | 45.0% |
| AACAGGACTGAAACGTTGGC+AGG | - | chr8.1:12704582-12704601 | MS.gene036823:CDS | 50.0% | |
| ACAGGACTGAAACGTTGGCA+GGG | - | chr8.1:12704583-12704602 | MS.gene036823:CDS | 50.0% | |
| CAGGATGGAAAAGTGGAGAC+TGG | - | chr8.1:12704760-12704779 | MS.gene036823:CDS | 50.0% | |
| CCTTCTCTCGGAGGAAGAAA+AGG | + | chr8.1:12705058-12705077 | None:intergenic | 50.0% | |
| TCCACTAACGTGCCAATTCC+AGG | - | chr8.1:12704329-12704348 | MS.gene036823:intron | 50.0% | |
| TCTGGAGGAGATTGGATGTG+TGG | - | chr8.1:12704465-12704484 | MS.gene036823:intron | 50.0% | |
| TCTTCCTCCGAGAGAAGGAT+AGG | - | chr8.1:12705060-12705079 | MS.gene036823:intron | 50.0% | |
| ! | AGGAAAATGAGCTGGTCTGG+AGG | - | chr8.1:12704450-12704469 | MS.gene036823:intron | 50.0% |
| ! | CCTTTTCTTCCTCCGAGAGA+AGG | - | chr8.1:12705055-12705074 | MS.gene036823:intron | 50.0% |
| ! | GGTAACATGGTGAGTTCTGG+AGG | - | chr8.1:12704711-12704730 | MS.gene036823:CDS | 50.0% |
| !! | CAGTCTCCACTTTTCCATCC+TGG | + | chr8.1:12704762-12704781 | None:intergenic | 50.0% |
| !! | GTCTCCACTTTTCCATCCTG+GGG | + | chr8.1:12704760-12704779 | None:intergenic | 50.0% |
| !! | TCTCCACTTTTCCATCCTGG+GGG | + | chr8.1:12704759-12704778 | None:intergenic | 50.0% |
| ACTGTAGTTCTCCCCCAGGA+TGG | - | chr8.1:12704745-12704764 | MS.gene036823:CDS | 55.0% | |
| CAGGACTGAAACGTTGGCAG+GGG | - | chr8.1:12704584-12704603 | MS.gene036823:CDS | 55.0% | |
| GCCTGGAATTGGCACGTTAG+TGG | + | chr8.1:12704333-12704352 | None:intergenic | 55.0% | |
| GGGGGTAACATGGTGAGTTC+TGG | - | chr8.1:12704708-12704727 | MS.gene036823:CDS | 55.0% | |
| GGTCAGGGCCTCCATACTTT+GGG | + | chr8.1:12704545-12704564 | None:intergenic | 55.0% | |
| GTGGAGACTGGATTTGCCCT+AGG | - | chr8.1:12704772-12704791 | MS.gene036823:CDS | 55.0% | |
| TCAGACTGTAGTTCTCCCCC+AGG | - | chr8.1:12704741-12704760 | MS.gene036823:CDS | 55.0% | |
| TCTCCCCCAGGATGGAAAAG+TGG | - | chr8.1:12704753-12704772 | MS.gene036823:CDS | 55.0% | |
| ! | TGAGCTGGTCTGGAGGAGAT+TGG | - | chr8.1:12704457-12704476 | MS.gene036823:intron | 55.0% |
| CTGAAACGTTGGCAGGGGAC+TGG | - | chr8.1:12704589-12704608 | MS.gene036823:CDS | 60.0% | |
| GGGTCAGGGCCTCCATACTT+TGG | + | chr8.1:12704546-12704565 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 12703760 | 12705584 | 12703760 | ID=MS.gene036823 |
| chr8.1 | mRNA | 12703760 | 12705584 | 12703760 | ID=MS.gene036823.t1;Parent=MS.gene036823 |
| chr8.1 | exon | 12705557 | 12705584 | 12705557 | ID=MS.gene036823.t1.exon1;Parent=MS.gene036823.t1 |
| chr8.1 | CDS | 12705557 | 12705584 | 12705557 | ID=cds.MS.gene036823.t1;Parent=MS.gene036823.t1 |
| chr8.1 | exon | 12705431 | 12705485 | 12705431 | ID=MS.gene036823.t1.exon2;Parent=MS.gene036823.t1 |
| chr8.1 | CDS | 12705431 | 12705485 | 12705431 | ID=cds.MS.gene036823.t1;Parent=MS.gene036823.t1 |
| chr8.1 | exon | 12704551 | 12704892 | 12704551 | ID=MS.gene036823.t1.exon3;Parent=MS.gene036823.t1 |
| chr8.1 | CDS | 12704551 | 12704892 | 12704551 | ID=cds.MS.gene036823.t1;Parent=MS.gene036823.t1 |
| chr8.1 | exon | 12703902 | 12703972 | 12703902 | ID=MS.gene036823.t1.exon4;Parent=MS.gene036823.t1 |
| chr8.1 | CDS | 12703902 | 12703972 | 12703902 | ID=cds.MS.gene036823.t1;Parent=MS.gene036823.t1 |
| chr8.1 | exon | 12703760 | 12703773 | 12703760 | ID=MS.gene036823.t1.exon5;Parent=MS.gene036823.t1 |
| chr8.1 | CDS | 12703760 | 12703773 | 12703760 | ID=cds.MS.gene036823.t1;Parent=MS.gene036823.t1 |
| Gene Sequence |
| Protein sequence |
