Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014815.t1 | XP_003603428.2 | 96.5 | 171 | 5 | 1 | 1 | 171 | 1 | 170 | 8.80E-94 | 352.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014815.t1 | O13801 | 29.8 | 161 | 87 | 5 | 3 | 163 | 343 | 477 | 2.4e-07 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014815.t1 | G7JB51 | 96.5 | 171 | 5 | 1 | 1 | 171 | 1 | 170 | 6.3e-94 | 352.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067346 | MS.gene014815 | PPI |
| MS.gene61472 | MS.gene014815 | PPI |
| MS.gene64407 | MS.gene014815 | PPI |
| MS.gene59076 | MS.gene014815 | PPI |
| MS.gene014815 | MS.gene62452 | PPI |
| MS.gene038852 | MS.gene014815 | PPI |
| MS.gene83340 | MS.gene014815 | PPI |
| MS.gene036823 | MS.gene014815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014815.t1 | MTR_3g107610 | 96.491 | 171 | 5 | 1 | 1 | 171 | 1 | 170 | 1.54e-107 | 304 |
| MS.gene014815.t1 | MTR_3g107610 | 90.132 | 152 | 13 | 2 | 1 | 152 | 1 | 150 | 1.28e-84 | 246 |
| MS.gene014815.t1 | MTR_4g011190 | 61.728 | 162 | 46 | 4 | 1 | 162 | 1 | 146 | 4.56e-56 | 173 |
| MS.gene014815.t1 | MTR_4g113840 | 43.030 | 165 | 51 | 6 | 5 | 161 | 6 | 135 | 6.85e-33 | 114 |
| MS.gene014815.t1 | MTR_2g054750 | 36.306 | 157 | 59 | 3 | 5 | 160 | 6 | 122 | 4.38e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014815.t1 | AT3G15680 | 60.234 | 171 | 59 | 5 | 1 | 169 | 1 | 164 | 2.23e-60 | 185 |
| MS.gene014815.t1 | AT3G15680 | 60.234 | 171 | 59 | 5 | 1 | 169 | 1 | 164 | 2.23e-60 | 185 |
| MS.gene014815.t1 | AT5G25490 | 62.791 | 172 | 50 | 5 | 1 | 164 | 1 | 166 | 2.98e-55 | 172 |
| MS.gene014815.t1 | AT5G25490 | 62.791 | 172 | 50 | 5 | 1 | 164 | 1 | 166 | 2.98e-55 | 172 |
| MS.gene014815.t1 | AT2G26695 | 40.764 | 157 | 65 | 5 | 5 | 161 | 6 | 134 | 2.81e-32 | 112 |
| MS.gene014815.t1 | AT2G26695 | 40.764 | 157 | 65 | 5 | 5 | 161 | 6 | 134 | 2.81e-32 | 112 |
| MS.gene014815.t1 | AT2G17975 | 30.769 | 169 | 80 | 6 | 3 | 157 | 5 | 150 | 4.75e-16 | 73.9 |
Find 71 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGGCGGCGCCGTTGATTT+TGG | 0.178200 | 3.3:-87970402 | MS.gene014815:CDS |
| TTGAGATCACCATACGGTTT+TGG | 0.292602 | 3.3:-87970180 | MS.gene014815:CDS |
| GGGGAGTCAAGAATGATTTC+TGG | 0.322815 | 3.3:-87970426 | MS.gene014815:CDS |
| TTGAGAAGTTCACGATAAAT+AGG | 0.332528 | 3.3:+87969705 | None:intergenic |
| TCGGTAGCATTCCATTCTAT+TGG | 0.379779 | 3.3:+87969765 | None:intergenic |
| GGCTCCTTTCTTGGTGGAAG+AGG | 0.386495 | 3.3:-87970378 | MS.gene014815:CDS |
| GAGAAGGTATCAATATCCTT+AGG | 0.387497 | 3.3:+87970231 | None:intergenic |
| GGCACCACATTTGAAGCAAC+TGG | 0.387865 | 3.3:+87970254 | None:intergenic |
| ACTCGCCCCGGCTGGAAATC+CGG | 0.405258 | 3.3:-87970129 | MS.gene014815:CDS |
| GTGCCTCCACTCGCCCCGGC+TGG | 0.416254 | 3.3:-87970137 | MS.gene014815:CDS |
| GGGCCGGTGGTGAAAGGAAA+AGG | 0.421977 | 3.3:+87970345 | None:intergenic |
| CAGTCACCAGGACGGACATC+AGG | 0.429559 | 3.3:+87970324 | None:intergenic |
| CTGATGTCCGTCCTGGTGAC+TGG | 0.431260 | 3.3:-87970323 | MS.gene014815:CDS |
| AGATGAGCAGACCAGGAGAT+TGG | 0.434758 | 3.3:-87970506 | MS.gene014815:CDS |
| GTCCTGCAGTTCCAATCTCC+TGG | 0.444104 | 3.3:+87970495 | None:intergenic |
| CTCTTCTTTGAAAGTTGAGG+TGG | 0.445847 | 3.3:+87970466 | None:intergenic |
| GGAGGAGGCAGCGCCGGTGG+TGG | 0.457413 | 3.3:-87970159 | MS.gene014815:CDS |
| CCGGTGACTGGATATGCAAC+AGG | 0.466598 | 3.3:-87970110 | MS.gene014815:intron |
| CAGTCACCGGATTTCCAGCC+GGG | 0.479965 | 3.3:+87970123 | None:intergenic |
| CTTCAAATGTGGTGCCCCTA+AGG | 0.480371 | 3.3:-87970247 | MS.gene014815:CDS |
| CCGGCTGGAAATCCGGTGAC+TGG | 0.485260 | 3.3:-87970122 | MS.gene014815:CDS |
| GCATAACTTCGCCAATAGAA+TGG | 0.497407 | 3.3:-87969776 | MS.gene014815:CDS |
| CTTCCAGTACTAGATTCCCT+TGG | 0.497781 | 3.3:+87969733 | None:intergenic |
| ATTCTCTTCTTTGAAAGTTG+AGG | 0.498262 | 3.3:+87970463 | None:intergenic |
| TTTGGTGGCTCCTTTCTTGG+TGG | 0.500076 | 3.3:-87970384 | MS.gene014815:CDS |
| AGAGCCTCTTCCACCAAGAA+AGG | 0.502352 | 3.3:+87970374 | None:intergenic |
| AGCAGAAAGATGAGCAGACC+AGG | 0.504369 | 3.3:-87970513 | None:intergenic |
| GGCCGGTGGTGAAAGGAAAA+GGG | 0.509497 | 3.3:+87970346 | None:intergenic |
| AGAAGGTATCAATATCCTTA+GGG | 0.509984 | 3.3:+87970232 | None:intergenic |
| GACCAGGAGATTGGAACTGC+AGG | 0.511105 | 3.3:-87970497 | MS.gene014815:CDS |
| GCTACCGATGCAACGGTCCA+AGG | 0.513927 | 3.3:-87969750 | MS.gene014815:CDS |
| GGATTTCCAGCCGGGGCGAG+TGG | 0.514801 | 3.3:+87970131 | None:intergenic |
| AGAATGATTTCTGGCGGCGG+CGG | 0.516918 | 3.3:-87970417 | MS.gene014815:CDS |
| TTTGAAGCAACTGGAGCGGC+TGG | 0.520103 | 3.3:+87970263 | None:intergenic |
| GCGAGTGGAGGCACCACCAC+CGG | 0.520780 | 3.3:+87970146 | None:intergenic |
| GTCTGAGGAGTCAGAGGAGA+AGG | 0.523791 | 3.3:+87970215 | None:intergenic |
| CCAGTCACCGGATTTCCAGC+CGG | 0.530047 | 3.3:+87970122 | None:intergenic |
| TTCTTGACTCCCCACATCGT+TGG | 0.531867 | 3.3:+87970436 | None:intergenic |
| ACCGGCCCTGATGTCCGTCC+TGG | 0.532481 | 3.3:-87970330 | MS.gene014815:CDS |
| GGTCCAAGGGAATCTAGTAC+TGG | 0.534715 | 3.3:-87969736 | MS.gene014815:CDS |
| TTTGGAGGAGGCAGCGCCGG+TGG | 0.535377 | 3.3:-87970162 | MS.gene014815:CDS |
| GAGAATCTTGCCAACGATGT+GGG | 0.536610 | 3.3:-87970446 | MS.gene014815:CDS |
| GGTGACTGGTATTGTACTGT+TGG | 0.542639 | 3.3:-87970309 | MS.gene014815:CDS |
| ACATCAGGGCCGGTGGTGAA+AGG | 0.548866 | 3.3:+87970339 | None:intergenic |
| ATTCCCTTGGACCGTTGCAT+CGG | 0.549976 | 3.3:+87969746 | None:intergenic |
| TTTCCAGCCGGGGCGAGTGG+AGG | 0.551998 | 3.3:+87970134 | None:intergenic |
| CGCTCCAGTTGCTTCAAATG+TGG | 0.553538 | 3.3:-87970258 | MS.gene014815:CDS |
| CTGCCTCCTCCAAAACCGTA+TGG | 0.574316 | 3.3:+87970171 | None:intergenic |
| ACCAGGACGGACATCAGGGC+CGG | 0.576233 | 3.3:+87970329 | None:intergenic |
| AAAGGAGCCACCAAAATCAA+CGG | 0.591777 | 3.3:+87970392 | None:intergenic |
| CTACCGATGCAACGGTCCAA+GGG | 0.596798 | 3.3:-87969749 | MS.gene014815:CDS |
| GGTGGTGCCTCCACTCGCCC+CGG | 0.597153 | 3.3:-87970141 | MS.gene014815:CDS |
| CCTGTTGCATATCCAGTCAC+CGG | 0.599174 | 3.3:+87970110 | None:intergenic |
| AGAGAATCTTGCCAACGATG+TGG | 0.600788 | 3.3:-87970447 | MS.gene014815:CDS |
| AGAATCTTGCCAACGATGTG+GGG | 0.604150 | 3.3:-87970445 | MS.gene014815:CDS |
| CAATAATCGTGGCATGTCTG+AGG | 0.609735 | 3.3:+87970200 | None:intergenic |
| TGGCATGTCTGAGGAGTCAG+AGG | 0.612841 | 3.3:+87970209 | None:intergenic |
| AGGACGGACATCAGGGCCGG+TGG | 0.617823 | 3.3:+87970332 | None:intergenic |
| TCAAGAATGATTTCTGGCGG+CGG | 0.619694 | 3.3:-87970420 | MS.gene014815:CDS |
| ATGGAATGCTACCGATGCAA+CGG | 0.621720 | 3.3:-87969757 | MS.gene014815:CDS |
| TATTGTACTGTTGGAAACTG+TGG | 0.623871 | 3.3:-87970300 | MS.gene014815:CDS |
| CGATTATTGAGATCACCATA+CGG | 0.625229 | 3.3:-87970186 | MS.gene014815:CDS |
| CACATTTGAAGCAACTGGAG+CGG | 0.628864 | 3.3:+87970259 | None:intergenic |
| AGTCACCAGGACGGACATCA+GGG | 0.629819 | 3.3:+87970325 | None:intergenic |
| ACAGTACAATACCAGTCACC+AGG | 0.642353 | 3.3:+87970312 | None:intergenic |
| GAGTCAAGAATGATTTCTGG+CGG | 0.656995 | 3.3:-87970423 | MS.gene014815:CDS |
| TACAATACCAGTCACCAGGA+CGG | 0.657561 | 3.3:+87970316 | None:intergenic |
| GCCGGTGGTGAAAGGAAAAG+GGG | 0.658542 | 3.3:+87970347 | None:intergenic |
| TATGGTGATCTCAATAATCG+TGG | 0.671531 | 3.3:+87970189 | None:intergenic |
| GAAGGTATCAATATCCTTAG+GGG | 0.684912 | 3.3:+87970233 | None:intergenic |
| AGTCACCGGATTTCCAGCCG+GGG | 0.690621 | 3.3:+87970124 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAACAAAATCTCATAAAAA+TGG | - | chr3.3:87970272-87970291 | MS.gene014815:CDS | 20.0% |
| !! | GATACTTCTTATAAATATTG+TGG | - | chr3.3:87970243-87970262 | MS.gene014815:CDS | 20.0% |
| !! | TTTCATTTGTCTCATTATAA+GGG | + | chr3.3:87970372-87970391 | None:intergenic | 20.0% |
| !!! | CATTTTTATGAGATTTTGTT+AGG | + | chr3.3:87970274-87970293 | None:intergenic | 20.0% |
| ! | CTTCTTATAAATATTGTGGT+TGG | - | chr3.3:87970247-87970266 | MS.gene014815:CDS | 25.0% |
| ! | GTTTCATTTGTCTCATTATA+AGG | + | chr3.3:87970373-87970392 | None:intergenic | 25.0% |
| ACATGACACTTATAATGAGA+CGG | + | chr3.3:87970217-87970236 | None:intergenic | 30.0% | |
| ! | ATTCTCTTCTTTGAAAGTTG+AGG | + | chr3.3:87969758-87969777 | None:intergenic | 30.0% |
| !! | AGAAGGTATCAATATCCTTA+GGG | + | chr3.3:87969989-87970008 | None:intergenic | 30.0% |
| AGAATTGAAATGTGTAGGTC+TGG | - | chr3.3:87970410-87970429 | MS.gene014815:CDS | 35.0% | |
| CAAATTAGAACGAAGTAGCA+AGG | + | chr3.3:87970162-87970181 | None:intergenic | 35.0% | |
| CGATTATTGAGATCACCATA+CGG | - | chr3.3:87970032-87970051 | MS.gene014815:intron | 35.0% | |
| GAATTGAAATGTGTAGGTCT+GGG | - | chr3.3:87970411-87970430 | MS.gene014815:CDS | 35.0% | |
| GACCTACACATTTCAATTCT+CGG | + | chr3.3:87970410-87970429 | None:intergenic | 35.0% | |
| TACCGAGAATTGAAATGTGT+AGG | - | chr3.3:87970405-87970424 | MS.gene014815:CDS | 35.0% | |
| TATGGTGATCTCAATAATCG+TGG | + | chr3.3:87970032-87970051 | None:intergenic | 35.0% | |
| TATTGTACTGTTGGAAACTG+TGG | - | chr3.3:87969918-87969937 | MS.gene014815:intron | 35.0% | |
| ! | CTTGCTACTTCGTTCTAATT+TGG | - | chr3.3:87970160-87970179 | MS.gene014815:CDS | 35.0% |
| !! | GAAGGTATCAATATCCTTAG+GGG | + | chr3.3:87969988-87970007 | None:intergenic | 35.0% |
| !! | GAGAAGGTATCAATATCCTT+AGG | + | chr3.3:87969990-87970009 | None:intergenic | 35.0% |
| AAAGGAGCCACCAAAATCAA+CGG | + | chr3.3:87969829-87969848 | None:intergenic | 40.0% | |
| CAATTCTCGGTAATGTCAGT+AGG | + | chr3.3:87970397-87970416 | None:intergenic | 40.0% | |
| GCATAACTTCGCCAATAGAA+TGG | - | chr3.3:87970442-87970461 | MS.gene014815:CDS | 40.0% | |
| TCGGTAGCATTCCATTCTAT+TGG | + | chr3.3:87970456-87970475 | None:intergenic | 40.0% | |
| ! | CTCTTCTTTGAAAGTTGAGG+TGG | + | chr3.3:87969755-87969774 | None:intergenic | 40.0% |
| ! | GAGTCAAGAATGATTTCTGG+CGG | - | chr3.3:87969795-87969814 | MS.gene014815:intron | 40.0% |
| ! | TTGAGATCACCATACGGTTT+TGG | - | chr3.3:87970038-87970057 | MS.gene014815:intron | 40.0% |
| ACAGTACAATACCAGTCACC+AGG | + | chr3.3:87969909-87969928 | None:intergenic | 45.0% | |
| AGAATCTTGCCAACGATGTG+GGG | - | chr3.3:87969773-87969792 | MS.gene014815:CDS | 45.0% | |
| AGAGAATCTTGCCAACGATG+TGG | - | chr3.3:87969771-87969790 | MS.gene014815:CDS | 45.0% | |
| ATGGAATGCTACCGATGCAA+CGG | - | chr3.3:87970461-87970480 | MS.gene014815:CDS | 45.0% | |
| CAATAATCGTGGCATGTCTG+AGG | + | chr3.3:87970021-87970040 | None:intergenic | 45.0% | |
| CTTCCAGTACTAGATTCCCT+TGG | + | chr3.3:87970488-87970507 | None:intergenic | 45.0% | |
| GAGAATCTTGCCAACGATGT+GGG | - | chr3.3:87969772-87969791 | MS.gene014815:CDS | 45.0% | |
| GGGGAGTCAAGAATGATTTC+TGG | - | chr3.3:87969792-87969811 | MS.gene014815:CDS | 45.0% | |
| GGTGACTGGTATTGTACTGT+TGG | - | chr3.3:87969909-87969928 | MS.gene014815:intron | 45.0% | |
| TACAATACCAGTCACCAGGA+CGG | + | chr3.3:87969905-87969924 | None:intergenic | 45.0% | |
| ! | CACATTTGAAGCAACTGGAG+CGG | + | chr3.3:87969962-87969981 | None:intergenic | 45.0% |
| !! | AGATCACCATACGGTTTTGG+AGG | - | chr3.3:87970041-87970060 | MS.gene014815:intron | 45.0% |
| !! | GATTTTGGTGGCTCCTTTCT+TGG | - | chr3.3:87969831-87969850 | MS.gene014815:intron | 45.0% |
| !! | TCAAGAATGATTTCTGGCGG+CGG | - | chr3.3:87969798-87969817 | MS.gene014815:intron | 45.0% |
| AGAGCCTCTTCCACCAAGAA+AGG | + | chr3.3:87969847-87969866 | None:intergenic | 50.0% | |
| ATTCCCTTGGACCGTTGCAT+CGG | + | chr3.3:87970475-87970494 | None:intergenic | 50.0% | |
| CCTGTTGCATATCCAGTCAC+CGG | + | chr3.3:87970111-87970130 | None:intergenic | 50.0% | |
| CGCTCCAGTTGCTTCAAATG+TGG | - | chr3.3:87969960-87969979 | MS.gene014815:intron | 50.0% | |
| CTTCAAATGTGGTGCCCCTA+AGG | - | chr3.3:87969971-87969990 | MS.gene014815:intron | 50.0% | |
| GGTCCAAGGGAATCTAGTAC+TGG | - | chr3.3:87970482-87970501 | MS.gene014815:CDS | 50.0% | |
| TTCTTGACTCCCCACATCGT+TGG | + | chr3.3:87969785-87969804 | None:intergenic | 50.0% | |
| ! | GGCACCACATTTGAAGCAAC+TGG | + | chr3.3:87969967-87969986 | None:intergenic | 50.0% |
| ! | TCCCCTTTTCCTTTCACCAC+CGG | - | chr3.3:87969870-87969889 | MS.gene014815:intron | 50.0% |
| ! | TTTGGTGGCTCCTTTCTTGG+TGG | - | chr3.3:87969834-87969853 | MS.gene014815:intron | 50.0% |
| !!! | TCACCATACGGTTTTGGAGG+AGG | - | chr3.3:87970044-87970063 | MS.gene014815:intron | 50.0% |
| AGTCACCAGGACGGACATCA+GGG | + | chr3.3:87969896-87969915 | None:intergenic | 55.0% | |
| CCGGTGACTGGATATGCAAC+AGG | - | chr3.3:87970108-87970127 | MS.gene014815:intron | 55.0% | |
| CTACCGATGCAACGGTCCAA+GGG | - | chr3.3:87970469-87970488 | MS.gene014815:CDS | 55.0% | |
| CTGCCTCCTCCAAAACCGTA+TGG | + | chr3.3:87970050-87970069 | None:intergenic | 55.0% | |
| GACCAGGAGATTGGAACTGC+AGG | - | chr3.3:87969721-87969740 | MS.gene014815:CDS | 55.0% | |
| GCCGGTGGTGAAAGGAAAAG+GGG | + | chr3.3:87969874-87969893 | None:intergenic | 55.0% | |
| GGCCGGTGGTGAAAGGAAAA+GGG | + | chr3.3:87969875-87969894 | None:intergenic | 55.0% | |
| GGCTCCTTTCTTGGTGGAAG+AGG | - | chr3.3:87969840-87969859 | MS.gene014815:intron | 55.0% | |
| GTCCTGCAGTTCCAATCTCC+TGG | + | chr3.3:87969726-87969745 | None:intergenic | 55.0% | |
| GTCTGAGGAGTCAGAGGAGA+AGG | + | chr3.3:87970006-87970025 | None:intergenic | 55.0% | |
| TGGCATGTCTGAGGAGTCAG+AGG | + | chr3.3:87970012-87970031 | None:intergenic | 55.0% | |
| ! | TTTGAAGCAACTGGAGCGGC+TGG | + | chr3.3:87969958-87969977 | None:intergenic | 55.0% |
| !! | AGAATGATTTCTGGCGGCGG+CGG | - | chr3.3:87969801-87969820 | MS.gene014815:intron | 55.0% |
| ACATCAGGGCCGGTGGTGAA+AGG | + | chr3.3:87969882-87969901 | None:intergenic | 60.0% | |
| AGTCACCGGATTTCCAGCCG+GGG | + | chr3.3:87970097-87970116 | None:intergenic | 60.0% | |
| CAGTCACCAGGACGGACATC+AGG | + | chr3.3:87969897-87969916 | None:intergenic | 60.0% | |
| CAGTCACCGGATTTCCAGCC+GGG | + | chr3.3:87970098-87970117 | None:intergenic | 60.0% | |
| CCAGTCACCGGATTTCCAGC+CGG | + | chr3.3:87970099-87970118 | None:intergenic | 60.0% | |
| CTGATGTCCGTCCTGGTGAC+TGG | - | chr3.3:87969895-87969914 | MS.gene014815:intron | 60.0% | |
| GCTACCGATGCAACGGTCCA+AGG | - | chr3.3:87970468-87970487 | MS.gene014815:CDS | 60.0% | |
| GGGCCGGTGGTGAAAGGAAA+AGG | + | chr3.3:87969876-87969895 | None:intergenic | 60.0% | |
| ACCAGGACGGACATCAGGGC+CGG | + | chr3.3:87969892-87969911 | None:intergenic | 65.0% | |
| ACTCGCCCCGGCTGGAAATC+CGG | - | chr3.3:87970089-87970108 | MS.gene014815:intron | 65.0% | |
| CCGGCTGGAAATCCGGTGAC+TGG | - | chr3.3:87970096-87970115 | MS.gene014815:intron | 65.0% | |
| !!! | GGCGGCGCCGTTGATTTTGG+TGG | - | chr3.3:87969819-87969838 | MS.gene014815:intron | 65.0% |
| !!! | GGTTTTGGAGGAGGCAGCGC+CGG | - | chr3.3:87970053-87970072 | MS.gene014815:intron | 65.0% |
| ACCGGCCCTGATGTCCGTCC+TGG | - | chr3.3:87969888-87969907 | MS.gene014815:intron | 70.0% | |
| AGGACGGACATCAGGGCCGG+TGG | + | chr3.3:87969889-87969908 | None:intergenic | 70.0% | |
| GGATTTCCAGCCGGGGCGAG+TGG | + | chr3.3:87970090-87970109 | None:intergenic | 70.0% | |
| TTTCCAGCCGGGGCGAGTGG+AGG | + | chr3.3:87970087-87970106 | None:intergenic | 70.0% | |
| ! | TTTGGAGGAGGCAGCGCCGG+TGG | - | chr3.3:87970056-87970075 | MS.gene014815:intron | 70.0% |
| !! | GCGAGTGGAGGCACCACCAC+CGG | + | chr3.3:87970075-87970094 | None:intergenic | 70.0% |
| !!! | GGCGGCGGCGCCGTTGATTT+TGG | - | chr3.3:87969816-87969835 | MS.gene014815:intron | 70.0% |
| GGTGGTGCCTCCACTCGCCC+CGG | - | chr3.3:87970077-87970096 | MS.gene014815:intron | 75.0% | |
| ! | GTGCCTCCACTCGCCCCGGC+TGG | - | chr3.3:87970081-87970100 | MS.gene014815:intron | 80.0% |
| !!! | GGAGGAGGCAGCGCCGGTGG+TGG | - | chr3.3:87970059-87970078 | MS.gene014815:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87969714 | 87970526 | 87969714 | ID=MS.gene014815 |
| chr3.3 | mRNA | 87969714 | 87970526 | 87969714 | ID=MS.gene014815.t1;Parent=MS.gene014815 |
| chr3.3 | exon | 87970111 | 87970526 | 87970111 | ID=MS.gene014815.t1.exon1;Parent=MS.gene014815.t1 |
| chr3.3 | CDS | 87970111 | 87970526 | 87970111 | ID=cds.MS.gene014815.t1;Parent=MS.gene014815.t1 |
| chr3.3 | exon | 87969714 | 87969813 | 87969714 | ID=MS.gene014815.t1.exon2;Parent=MS.gene014815.t1 |
| chr3.3 | CDS | 87969714 | 87969813 | 87969714 | ID=cds.MS.gene014815.t1;Parent=MS.gene014815.t1 |
| Gene Sequence |
| Protein sequence |
