Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037303.t1 | XP_013470352.1 | 99.9 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.00E+00 | 1670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037303.t1 | Q8H0U4 | 70.5 | 893 | 260 | 3 | 3 | 895 | 2 | 891 | 0.0e+00 | 1271.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037303.t1 | A0A072W2D6 | 99.9 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.0e+00 | 1670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037303 | MS.gene072925 | PPI |
| MS.gene037303 | MS.gene32606 | PPI |
| MS.gene32605 | MS.gene037303 | PPI |
| MS.gene037303 | MS.gene014807 | PPI |
| MS.gene037303 | MS.gene014808 | PPI |
| MS.gene072924 | MS.gene037303 | PPI |
| MS.gene32604 | MS.gene037303 | PPI |
| MS.gene072926 | MS.gene037303 | PPI |
| MS.gene037303 | MS.gene014809 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037303.t1 | MTR_1g112920 | 99.888 | 895 | 1 | 0 | 1 | 895 | 1 | 895 | 0.0 | 1839 |
| MS.gene037303.t1 | MTR_1g112920 | 99.629 | 809 | 3 | 0 | 1 | 809 | 1 | 809 | 0.0 | 1655 |
| MS.gene037303.t1 | MTR_8g099785 | 21.550 | 826 | 488 | 35 | 28 | 774 | 12 | 756 | 6.32e-22 | 102 |
| MS.gene037303.t1 | MTR_3g491860 | 21.566 | 779 | 465 | 31 | 68 | 774 | 51 | 755 | 4.09e-20 | 96.7 |
| MS.gene037303.t1 | MTR_3g491840 | 22.074 | 598 | 371 | 20 | 68 | 612 | 51 | 606 | 1.59e-18 | 91.7 |
| MS.gene037303.t1 | MTR_2g006750 | 20.896 | 536 | 342 | 13 | 36 | 554 | 20 | 490 | 5.96e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037303.t1 | AT2G16950 | 75.028 | 893 | 220 | 3 | 3 | 895 | 2 | 891 | 0.0 | 1397 |
| MS.gene037303.t1 | AT2G16950 | 74.693 | 897 | 220 | 4 | 3 | 895 | 2 | 895 | 0.0 | 1390 |
| MS.gene037303.t1 | AT2G16960 | 51.264 | 554 | 252 | 6 | 357 | 895 | 2 | 552 | 0.0 | 548 |
| MS.gene037303.t1 | AT2G16960 | 51.418 | 282 | 114 | 3 | 317 | 598 | 1 | 259 | 5.69e-86 | 284 |
| MS.gene037303.t1 | AT2G16960 | 47.984 | 248 | 116 | 3 | 661 | 895 | 258 | 505 | 9.47e-63 | 221 |
| MS.gene037303.t1 | AT5G53480 | 22.826 | 552 | 328 | 17 | 68 | 573 | 53 | 552 | 1.66e-21 | 101 |
| MS.gene037303.t1 | AT3G08947 | 24.277 | 346 | 189 | 10 | 238 | 555 | 19 | 319 | 3.20e-16 | 83.6 |
| MS.gene037303.t1 | AT3G08947 | 24.277 | 346 | 189 | 10 | 238 | 555 | 19 | 319 | 3.68e-16 | 83.6 |
| MS.gene037303.t1 | AT2G16953 | 45.783 | 83 | 17 | 2 | 726 | 808 | 9 | 63 | 7.29e-13 | 64.7 |
Find 230 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTCTTGATTTGCTTTC+TGG | 0.001329 | 1.1:+79993132 | MS.gene037303:CDS |
| TATTTCTTCCCAGATTATTT+AGG | 0.165061 | 1.1:+79987497 | MS.gene037303:CDS |
| GATTGGAATATTGTTGAATT+TGG | 0.172792 | 1.1:-79984489 | None:intergenic |
| GGGTCTTCTTCGAAGAATTT+TGG | 0.204358 | 1.1:+79991621 | MS.gene037303:CDS |
| ACAATTTGACAACGTTCTTA+TGG | 0.206291 | 1.1:+79991600 | MS.gene037303:CDS |
| CAAGGAGATCTGCACCTTAT+TGG | 0.211567 | 1.1:+79984414 | MS.gene037303:CDS |
| GTACATCGGTGTCAAGAATT+TGG | 0.218570 | 1.1:-79987447 | None:intergenic |
| TTCACGTATTGTTGGTATTC+AGG | 0.235848 | 1.1:-79985585 | None:intergenic |
| CTCTCGAATCCTGTGAATTT+TGG | 0.239943 | 1.1:+79988817 | MS.gene037303:CDS |
| CAGGCCAATCCTGCTGCAGC+TGG | 0.248030 | 1.1:+79993081 | MS.gene037303:intron |
| CAGGTCAAAGCCAATCCTTC+TGG | 0.254724 | 1.1:+79999587 | MS.gene037303:intron |
| AGAAATTTGTTGCTCCAATA+AGG | 0.264624 | 1.1:-79984428 | None:intergenic |
| GTTGACATGCATAGGAAATA+AGG | 0.265987 | 1.1:+79999728 | MS.gene037303:intron |
| GTTTAGCAAATTTATTATTC+AGG | 0.266638 | 1.1:+79991093 | MS.gene037303:CDS |
| GATATTCTCTCAAACGTCTT+TGG | 0.272366 | 1.1:+79989911 | MS.gene037303:CDS |
| ATTTCTTCCCAGATTATTTA+GGG | 0.299791 | 1.1:+79987498 | MS.gene037303:CDS |
| TGATGTTACCCTAAATAATC+TGG | 0.300241 | 1.1:-79987506 | None:intergenic |
| TACAAGGGCTTGCAATAATT+CGG | 0.300709 | 1.1:-79985712 | None:intergenic |
| CAAAGTGCATTTGCCTTACT+TGG | 0.306195 | 1.1:+79995529 | MS.gene037303:CDS |
| TACATCGGTGTCAAGAATTT+GGG | 0.317331 | 1.1:-79987446 | None:intergenic |
| TTGTCAACACATGGAATTTA+CGG | 0.320017 | 1.1:+79989867 | MS.gene037303:CDS |
| TTGATCCATGGATACATATA+AGG | 0.331730 | 1.1:-79987827 | None:intergenic |
| AGCATGAAATACTTCGTATC+AGG | 0.336523 | 1.1:-79991057 | None:intergenic |
| CAATTTGACAACGTTCTTAT+GGG | 0.336844 | 1.1:+79991601 | MS.gene037303:CDS |
| GAGAAAGAAGATGCCTTTAG+AGG | 0.340072 | 1.1:+79999471 | MS.gene037303:CDS |
| ATCAGTGTTGTTGTTCAAAC+TGG | 0.347298 | 1.1:+79985672 | MS.gene037303:CDS |
| AAGCACCTGATGGTTGCATT+TGG | 0.352910 | 1.1:+79991844 | MS.gene037303:CDS |
| CCATACTGCAGCCACATCTA+AGG | 0.353767 | 1.1:+79988742 | MS.gene037303:intron |
| AGCACCTGATGGTTGCATTT+GGG | 0.375893 | 1.1:+79991845 | MS.gene037303:CDS |
| CTTTAAATCACCTCAACAAT+AGG | 0.377945 | 1.1:-79989959 | None:intergenic |
| ATTGTTGAAGTCAGGAAGAT+TGG | 0.379166 | 1.1:-79984506 | None:intergenic |
| TTCAGCAAATTGAGTGAATC+CGG | 0.379593 | 1.1:-79992824 | None:intergenic |
| AATTTGCTGAACCTGTGTTT+AGG | 0.380548 | 1.1:+79992836 | MS.gene037303:CDS |
| AGCCCCAGCTGCAGCAGGAT+TGG | 0.381992 | 1.1:-79993085 | None:intergenic |
| CCGCTGATAAGTCTCAGATT+TGG | 0.382450 | 1.1:+79984464 | MS.gene037303:CDS |
| TGCTGCCACTTCTCAATTAA+CGG | 0.388192 | 1.1:-79992229 | None:intergenic |
| GTCAAATTGTTCGTAACCCT+TGG | 0.388416 | 1.1:-79991587 | None:intergenic |
| ATCTCCAACGGTTGACAACT+TGG | 0.389447 | 1.1:-79990258 | None:intergenic |
| ATGAGGTAATTGTTGAAGTC+AGG | 0.393517 | 1.1:-79984514 | None:intergenic |
| ATGTGTGTGGGTTAGGGTAT+CGG | 0.398560 | 1.1:+79991559 | MS.gene037303:intron |
| AGGCCAATCCTGCTGCAGCT+GGG | 0.399079 | 1.1:+79993082 | MS.gene037303:intron |
| GCGCACACATACCAGTTGTT+TGG | 0.401100 | 1.1:-79995834 | None:intergenic |
| AATAATGCATGCTGGGCAAT+TGG | 0.401733 | 1.1:+79995960 | MS.gene037303:CDS |
| ATGAGAATGTCAAGATAAAC+AGG | 0.402241 | 1.1:-79992202 | None:intergenic |
| TGAAGAGCTGGCACCGCGCT+TGG | 0.405454 | 1.1:+79991810 | MS.gene037303:CDS |
| ACAAGGGCTTGCAATAATTC+GGG | 0.405569 | 1.1:-79985711 | None:intergenic |
| TTTCATGTATCAAGGTTTCA+TGG | 0.405890 | 1.1:+79989652 | MS.gene037303:CDS |
| AAATGTACAGGAAATTTCTA+AGG | 0.406680 | 1.1:+79995914 | MS.gene037303:intron |
| TTCGGCAACGATGGCGGCGG+CGG | 0.408972 | 1.1:+79984357 | None:intergenic |
| TGAAGTCCGTCCTTCTATCT+TGG | 0.410052 | 1.1:+79988322 | MS.gene037303:CDS |
| ACCTCTGCATGCTGAAGAAT+TGG | 0.416754 | 1.1:-79998262 | None:intergenic |
| TCCTTGAAGCCTTGCTCTTG+TGG | 0.420545 | 1.1:-79984397 | None:intergenic |
| GGCCAATCCTGCTGCAGCTG+GGG | 0.422969 | 1.1:+79993083 | MS.gene037303:intron |
| GAACACTAGCTGAAGCTGTT+GGG | 0.426000 | 1.1:+79992069 | MS.gene037303:CDS |
| TGGCAGTGGAATAGAGAGTT+TGG | 0.427529 | 1.1:+79993170 | MS.gene037303:CDS |
| GGAAATTTCTAAGGTGCATC+AGG | 0.428251 | 1.1:+79995923 | MS.gene037303:intron |
| CTAGAACCTTAGCCAATGTC+TGG | 0.433718 | 1.1:-79992882 | None:intergenic |
| AATTGGAGAATTAGCAGTTA+AGG | 0.443187 | 1.1:+79995977 | MS.gene037303:CDS |
| TGAACTTGCCTCCAAACAAC+TGG | 0.443517 | 1.1:+79995823 | MS.gene037303:CDS |
| ACTCTGATTTCACGTATTGT+TGG | 0.445336 | 1.1:-79985593 | None:intergenic |
| TTCTCAACCTGATCGAGATC+AGG | 0.450786 | 1.1:+79989541 | MS.gene037303:CDS |
| GTGGAGGTTCGACAGGCTGC+AGG | 0.450835 | 1.1:+79985516 | MS.gene037303:CDS |
| TAACACTGGGGAGGCTTGCA+TGG | 0.452151 | 1.1:+79998400 | MS.gene037303:CDS |
| TTTAAGTGTAATTTCATGCC+TGG | 0.452548 | 1.1:+79998237 | MS.gene037303:CDS |
| GGTTGCATTTGGGAAATATC+AGG | 0.455320 | 1.1:+79991855 | MS.gene037303:CDS |
| GGTCTTGCATGGGTATAAAC+AGG | 0.456424 | 1.1:+79999780 | MS.gene037303:CDS |
| TGTGTGTGGGTTAGGGTATC+GGG | 0.457317 | 1.1:+79991560 | MS.gene037303:intron |
| GCACTTGGTGCCATAGGCGA+GGG | 0.460140 | 1.1:+79990314 | MS.gene037303:CDS |
| TTGTTACAGGCACTGGGTCC+CGG | 0.460458 | 1.1:+79992805 | MS.gene037303:intron |
| AGACCTTGTATCACCACATA+TGG | 0.461098 | 1.1:+79998431 | MS.gene037303:CDS |
| TCGAGCAAGGTCTCCAAGTA+AGG | 0.463436 | 1.1:-79995542 | None:intergenic |
| GCAAGCCCTTGTAAGTTGCT+TGG | 0.463586 | 1.1:+79985722 | MS.gene037303:CDS |
| TTCATTAAGAAAGCTATCGT+TGG | 0.466949 | 1.1:+79987668 | MS.gene037303:CDS |
| GAGATGATGGTTGGAAAGAA+AGG | 0.468462 | 1.1:+79990276 | MS.gene037303:CDS |
| TGCTCTTGTGGTTGCCACGA+TGG | 0.468773 | 1.1:-79984385 | None:intergenic |
| TCAAATTGTTCGTAACCCTT+GGG | 0.469035 | 1.1:-79991586 | None:intergenic |
| AACCTCGATTTCATGTATCA+AGG | 0.469473 | 1.1:+79989644 | MS.gene037303:CDS |
| TCTGGGAAGAAATATATTGA+TGG | 0.469870 | 1.1:-79987488 | None:intergenic |
| TACTGAGCCCCAGCTGCAGC+AGG | 0.470834 | 1.1:-79993090 | None:intergenic |
| AATTTCTGTGGAGGTTCGAC+AGG | 0.471977 | 1.1:+79985509 | MS.gene037303:CDS |
| GAAGCTGCCGTCTTGGCACT+TGG | 0.472209 | 1.1:+79990299 | MS.gene037303:CDS |
| TTAATGAAGCGTGAGGTGAT+TGG | 0.472656 | 1.1:-79987653 | None:intergenic |
| ATTGATGCACCCCTCGCCTA+TGG | 0.472848 | 1.1:-79990324 | None:intergenic |
| TGTTGGGGCAGAGCTGAATC+AGG | 0.472935 | 1.1:+79992085 | MS.gene037303:CDS |
| GTCCAAACCTCCAAGATAGA+AGG | 0.474273 | 1.1:-79988332 | None:intergenic |
| GGTTTCACAATGTTCTTTGA+GGG | 0.475278 | 1.1:+79995462 | MS.gene037303:intron |
| CTCTGCTAAGCCTGGTACAT+CGG | 0.475304 | 1.1:-79987461 | None:intergenic |
| TTAAATTGTATACATTCCTC+AGG | 0.483514 | 1.1:-79985557 | None:intergenic |
| TTGTCAACCGTTGGAGATGA+TGG | 0.484732 | 1.1:+79990263 | MS.gene037303:CDS |
| TTAGGGTATCGGGCATCCCA+AGG | 0.486599 | 1.1:+79991570 | MS.gene037303:intron |
| TACTGTCCAAGCAACTTACA+AGG | 0.487673 | 1.1:-79985728 | None:intergenic |
| ATATGTGGTGATACAAGGTC+TGG | 0.487991 | 1.1:-79998429 | None:intergenic |
| TCTGGACTAACAGAGGGTCT+TGG | 0.492966 | 1.1:+79993150 | MS.gene037303:CDS |
| ACCACAAGAGCAAGGCTTCA+AGG | 0.493504 | 1.1:+79984396 | MS.gene037303:CDS |
| ATAGGCGAGGGGTGCATCAA+TGG | 0.494250 | 1.1:+79990326 | MS.gene037303:CDS |
| CTTCATCTTCTCCCGTGCTC+AGG | 0.496141 | 1.1:+79984537 | MS.gene037303:CDS |
| GGCACTTGGTGCCATAGGCG+AGG | 0.496324 | 1.1:+79990313 | MS.gene037303:CDS |
| CATAGCACATAGACCTCTAA+AGG | 0.497484 | 1.1:-79999484 | None:intergenic |
| GGAAACTTATCATCAAGAAG+AGG | 0.498404 | 1.1:-79991034 | None:intergenic |
| AGGTTTCACAATGTTCTTTG+AGG | 0.500017 | 1.1:+79995461 | MS.gene037303:intron |
| AGAAAATAGTGCAATAACAC+TGG | 0.500123 | 1.1:+79998386 | MS.gene037303:CDS |
| TACTCTGATGCCTATTGTTG+AGG | 0.503181 | 1.1:+79989949 | MS.gene037303:CDS |
| GGATGATAATAAGCGTGTAC+AGG | 0.504024 | 1.1:+79991642 | MS.gene037303:CDS |
| GATTTCGGCAACGATGGCGG+CGG | 0.504335 | 1.1:+79984354 | None:intergenic |
| GTAGGAGGCTGCTGAAGAGC+TGG | 0.505364 | 1.1:+79991798 | MS.gene037303:intron |
| TCATTAAGAAAGCTATCGTT+GGG | 0.507655 | 1.1:+79987669 | MS.gene037303:CDS |
| ACTTAGAGCTCCAGAAGGAT+TGG | 0.507834 | 1.1:-79999597 | None:intergenic |
| CCGTGGCAAATAATGCATGC+TGG | 0.511391 | 1.1:+79995952 | MS.gene037303:CDS |
| CATGCTGAAGAATTGGTACC+AGG | 0.511727 | 1.1:-79998255 | None:intergenic |
| GAAGTCTGCCAGGTCTTGCA+TGG | 0.512364 | 1.1:+79999769 | MS.gene037303:CDS |
| TCCATGGATCAATATCTTCA+AGG | 0.514235 | 1.1:+79987838 | MS.gene037303:CDS |
| AGAAAGGGAAGCTGCCGTCT+TGG | 0.515248 | 1.1:+79990292 | MS.gene037303:CDS |
| ATTTCCCAAATGCAACCATC+AGG | 0.515910 | 1.1:-79991849 | None:intergenic |
| TCAGAGTTGCTGCCTTGTCT+CGG | 0.517680 | 1.1:+79985609 | MS.gene037303:CDS |
| CTAACAGAGGGTCTTGGCAG+TGG | 0.521808 | 1.1:+79993156 | MS.gene037303:CDS |
| CACACATACCAGTTGTTTGG+AGG | 0.522579 | 1.1:-79995831 | None:intergenic |
| GCAGATATTGTTGTCAAACA+TGG | 0.522794 | 1.1:+79989374 | MS.gene037303:intron |
| GATGTTACCCTAAATAATCT+GGG | 0.525662 | 1.1:-79987505 | None:intergenic |
| CAAGTAAGGCAAATGCACTT+TGG | 0.525940 | 1.1:-79995528 | None:intergenic |
| AGATGCTGCGCAATGGAGCA+TGG | 0.527099 | 1.1:+80000031 | MS.gene037303:intron |
| GTCTTGGCACTTGGTGCCAT+AGG | 0.527194 | 1.1:+79990308 | MS.gene037303:CDS |
| AAGCAGACCTGATCTCGATC+AGG | 0.528456 | 1.1:-79989548 | None:intergenic |
| CGTGGCAAATAATGCATGCT+GGG | 0.532263 | 1.1:+79995953 | MS.gene037303:CDS |
| ATTCTTGACACCGATGTACC+AGG | 0.532980 | 1.1:+79987451 | MS.gene037303:CDS |
| AGTCCGTCCTTCTATCTTGG+AGG | 0.534324 | 1.1:+79988325 | MS.gene037303:CDS |
| TAGGCTTACTGGAATAAGAC+GGG | 0.537920 | 1.1:-79989278 | None:intergenic |
| GAAATTACACTTAAAACAAA+CGG | 0.538928 | 1.1:-79998229 | None:intergenic |
| ATGGGCCGCTCTGCTAAGCC+TGG | 0.541464 | 1.1:-79987469 | None:intergenic |
| TGAAATTTGTTACAGGCACT+GGG | 0.542098 | 1.1:+79992799 | MS.gene037303:intron |
| TGGAGCATTTCATGCAACCT+TGG | 0.543238 | 1.1:+79998451 | MS.gene037303:CDS |
| TTTCATGCTGGACAGTATCT+CGG | 0.543512 | 1.1:+79991071 | MS.gene037303:CDS |
| CTGGGAAGAAATATATTGAT+GGG | 0.543520 | 1.1:-79987487 | None:intergenic |
| CTTTAGAGGTCTATGTGCTA+TGG | 0.547073 | 1.1:+79999485 | MS.gene037303:CDS |
| AAATCACATGGAAGGTGCAA+TGG | 0.547875 | 1.1:+79985758 | MS.gene037303:CDS |
| GCTCCATATGTGGTGATACA+AGG | 0.548018 | 1.1:-79998434 | None:intergenic |
| TTAGGCCTTATATGTATCCA+TGG | 0.548665 | 1.1:+79987822 | MS.gene037303:intron |
| GACAATACCTCTGGCAGATG+AGG | 0.549518 | 1.1:-79990356 | None:intergenic |
| TTTACACAATGAAGTCTGCC+AGG | 0.551434 | 1.1:+79999759 | MS.gene037303:CDS |
| CAGTACAACATTGCAAAAGT+AGG | 0.552476 | 1.1:-79995486 | None:intergenic |
| GATGTGAAGCACTCTAGAAG+TGG | 0.553176 | 1.1:-79992280 | None:intergenic |
| GGAACACTAGCTGAAGCTGT+TGG | 0.555336 | 1.1:+79992068 | MS.gene037303:CDS |
| CAGTAGTGATTTAAATCACA+TGG | 0.555357 | 1.1:+79985746 | MS.gene037303:CDS |
| AGATGATGGTTGGAAAGAAA+GGG | 0.556738 | 1.1:+79990277 | MS.gene037303:CDS |
| GTGCAGCAGATAAACACATA+AGG | 0.557393 | 1.1:+79985631 | MS.gene037303:CDS |
| TTGCTTTCTGGACTAACAGA+GGG | 0.557462 | 1.1:+79993144 | MS.gene037303:CDS |
| AACACTAGCTGAAGCTGTTG+GGG | 0.558665 | 1.1:+79992070 | MS.gene037303:CDS |
| GCATGAAATACTTCGTATCA+GGG | 0.559620 | 1.1:-79991056 | None:intergenic |
| TACTGCAGAAGTGCGGAAGT+TGG | 0.562642 | 1.1:+79987885 | MS.gene037303:CDS |
| ACCTTGAAGATATTGATCCA+TGG | 0.563420 | 1.1:-79987839 | None:intergenic |
| TCAGACCCAGACATTGGCTA+AGG | 0.565324 | 1.1:+79992876 | MS.gene037303:CDS |
| TGTGTAAAGCCATTGCAAGT+TGG | 0.567608 | 1.1:+79999633 | MS.gene037303:CDS |
| CAACCGTTGGAGATGATGGT+TGG | 0.567700 | 1.1:+79990267 | MS.gene037303:CDS |
| ACATACATGCCAACTTGCAA+TGG | 0.570331 | 1.1:-79999642 | None:intergenic |
| AGAATTGTATATGATGCTGT+TGG | 0.571114 | 1.1:+79992047 | MS.gene037303:CDS |
| CAAATAGTACCAAAATTCAC+AGG | 0.573838 | 1.1:-79988826 | None:intergenic |
| TCGATCACATTCCTTAGATG+TGG | 0.575912 | 1.1:-79988753 | None:intergenic |
| AACACTGGGGAGGCTTGCAT+GGG | 0.576589 | 1.1:+79998401 | MS.gene037303:CDS |
| GAATGAAGATACCTGAGCAC+GGG | 0.578328 | 1.1:-79984548 | None:intergenic |
| CCAGCATGCATTATTTGCCA+CGG | 0.578982 | 1.1:-79995952 | None:intergenic |
| TTTCCAACCATCATCTCCAA+CGG | 0.579118 | 1.1:-79990270 | None:intergenic |
| GATGCTGCGCAATGGAGCAT+GGG | 0.582692 | 1.1:+80000032 | MS.gene037303:intron |
| GTTATATAGATGCTGCGCAA+TGG | 0.582846 | 1.1:+80000024 | MS.gene037303:intron |
| TTGCTGAACCTGTGTTTAGG+AGG | 0.584270 | 1.1:+79992839 | MS.gene037303:CDS |
| GAAACTTATCATCAAGAAGA+GGG | 0.586624 | 1.1:-79991033 | None:intergenic |
| CAGGCCAAGTTGTCAACCGT+TGG | 0.586731 | 1.1:+79990254 | MS.gene037303:intron |
| AACTTCCGCACTTCTGCAGT+AGG | 0.586898 | 1.1:-79987883 | None:intergenic |
| TTATCTGCTGCACCGAGACA+AGG | 0.587214 | 1.1:-79985621 | None:intergenic |
| GTTTATACCCATGCAAGACC+TGG | 0.588423 | 1.1:-79999777 | None:intergenic |
| CATAATTCAGACCCAGACAT+TGG | 0.589201 | 1.1:+79992870 | MS.gene037303:CDS |
| AGTGTTGTTGTTCAAACTGG+AGG | 0.589586 | 1.1:+79985675 | MS.gene037303:CDS |
| TTAGGCTTACTGGAATAAGA+CGG | 0.590304 | 1.1:-79989279 | None:intergenic |
| GGACCAGTGTATGTCTGCAT+TGG | 0.592264 | 1.1:+80000053 | MS.gene037303:CDS |
| TGCCACCGTTAATTGAGAAG+TGG | 0.593114 | 1.1:+79992224 | MS.gene037303:CDS |
| TCAGCAAATTGAGTGAATCC+GGG | 0.593150 | 1.1:-79992823 | None:intergenic |
| AATCATATTAAAGCACCTGA+TGG | 0.597348 | 1.1:+79991834 | MS.gene037303:CDS |
| TATGGCACCAAGTGCCAAGA+CGG | 0.600274 | 1.1:-79990306 | None:intergenic |
| TGCAATGGATGCATTATCCA+AGG | 0.601884 | 1.1:+79985773 | MS.gene037303:CDS |
| GAAAATAGTGCAATAACACT+GGG | 0.602429 | 1.1:+79998387 | MS.gene037303:CDS |
| TGAACAGGGAATTTCTGTGG+AGG | 0.603671 | 1.1:+79985500 | MS.gene037303:intron |
| AAACACATAAGGTCTACGAC+TGG | 0.605568 | 1.1:+79985642 | MS.gene037303:CDS |
| CACTTGGTGCCATAGGCGAG+GGG | 0.605861 | 1.1:+79990315 | MS.gene037303:CDS |
| GTGATTTGGCTAGGTGTGTG+TGG | 0.606145 | 1.1:+79995769 | MS.gene037303:intron |
| CAAGGACGCAGATGAAGAAG+TGG | 0.606775 | 1.1:+79988794 | MS.gene037303:CDS |
| CAGCATCATATACAATTCTG+AGG | 0.609698 | 1.1:-79992043 | None:intergenic |
| CACGGGAGAAGATGAAGATG+AGG | 0.610536 | 1.1:-79984531 | None:intergenic |
| ACATTAAACTTACTCGAGCA+AGG | 0.610835 | 1.1:-79995555 | None:intergenic |
| TGATAATAAGCGTGTACAGG+AGG | 0.610882 | 1.1:+79991645 | MS.gene037303:CDS |
| ATGACGATGTTGTCAACACA+TGG | 0.610953 | 1.1:+79989858 | MS.gene037303:CDS |
| GCTCCAATGCAGACATACAC+TGG | 0.614134 | 1.1:-80000056 | None:intergenic |
| TGATACGAAGTATTTCATGC+TGG | 0.614417 | 1.1:+79991059 | MS.gene037303:CDS |
| AGTGATTTAAATCACATGGA+AGG | 0.616174 | 1.1:+79985750 | MS.gene037303:CDS |
| ACTTCCGCACTTCTGCAGTA+GGG | 0.623309 | 1.1:-79987882 | None:intergenic |
| TGTTGCAAAAGCAGAACAAG+CGG | 0.625501 | 1.1:-79991668 | None:intergenic |
| CAATAGGCATCAGAGTAGGA+AGG | 0.628208 | 1.1:-79989943 | None:intergenic |
| TAGGGTATCGGGCATCCCAA+GGG | 0.630072 | 1.1:+79991571 | MS.gene037303:intron |
| AACCTTGATACATGAAATCG+AGG | 0.630250 | 1.1:-79989646 | None:intergenic |
| AAGTCTGCCAGGTCTTGCAT+GGG | 0.631867 | 1.1:+79999770 | MS.gene037303:CDS |
| AGCTGGGGCTCAGTATGACA+AGG | 0.634404 | 1.1:+79993098 | MS.gene037303:CDS |
| TCGTGGCAACCACAAGAGCA+AGG | 0.637116 | 1.1:+79984388 | MS.gene037303:CDS |
| TAGAACCTTAGCCAATGTCT+GGG | 0.646402 | 1.1:-79992881 | None:intergenic |
| AGCTTTCTTAATGAAGCGTG+AGG | 0.646529 | 1.1:-79987660 | None:intergenic |
| TGCATGAAATGCTCCATATG+TGG | 0.649161 | 1.1:-79998444 | None:intergenic |
| TGAATCGCTTATTGAAGCCG+AGG | 0.649193 | 1.1:+79989413 | MS.gene037303:CDS |
| TTTATGCACCTCCTAAACAC+AGG | 0.650495 | 1.1:-79992847 | None:intergenic |
| ATATATGTTGCAAGTCAACA+AGG | 0.651496 | 1.1:+79988776 | MS.gene037303:CDS |
| ACCAATTCTTCAGCATGCAG+AGG | 0.652188 | 1.1:+79998261 | MS.gene037303:CDS |
| AGAATGAAGATACCTGAGCA+CGG | 0.654486 | 1.1:-79984549 | None:intergenic |
| CAAGAATTTCAGACAAACGA+GGG | 0.660281 | 1.1:-79995802 | None:intergenic |
| TTTGCTTTCTGGACTAACAG+AGG | 0.661941 | 1.1:+79993143 | MS.gene037303:CDS |
| TCAACAATAGGCATCAGAGT+AGG | 0.667528 | 1.1:-79989947 | None:intergenic |
| TCAAGAATTTCAGACAAACG+AGG | 0.668611 | 1.1:-79995803 | None:intergenic |
| GGTGCATCAGGCTATTTCCG+TGG | 0.668981 | 1.1:+79995935 | MS.gene037303:CDS |
| CATGAAATACTTCGTATCAG+GGG | 0.669623 | 1.1:-79991055 | None:intergenic |
| AGCGAACTTAGAGCTCCAGA+AGG | 0.670498 | 1.1:-79999602 | None:intergenic |
| ATAGTGCAATAACACTGGGG+AGG | 0.677121 | 1.1:+79998391 | MS.gene037303:CDS |
| TGCCACTTCTCAATTAACGG+TGG | 0.677949 | 1.1:-79992226 | None:intergenic |
| ACTGTCCAAGCAACTTACAA+GGG | 0.681669 | 1.1:-79985727 | None:intergenic |
| TATATCTGAAGAATAACCTG+AGG | 0.683811 | 1.1:+79985541 | MS.gene037303:CDS |
| ACATCGGTGTCAAGAATTTG+GGG | 0.688752 | 1.1:-79987445 | None:intergenic |
| TTTAATATGATTTCCAAGCG+CGG | 0.689897 | 1.1:-79991823 | None:intergenic |
| TCTTTATCCTCATCTGCCAG+AGG | 0.693093 | 1.1:+79990349 | MS.gene037303:CDS |
| ATGACCCTACTGCAGAAGTG+CGG | 0.693454 | 1.1:+79987878 | MS.gene037303:CDS |
| ATGTACCAGGCTTAGCAGAG+CGG | 0.696873 | 1.1:+79987464 | MS.gene037303:CDS |
| ATTGACAGAGCATTGCACCA+AGG | 0.701124 | 1.1:-79998468 | None:intergenic |
| AAACCTCCAAGATAGAAGGA+CGG | 0.706468 | 1.1:-79988328 | None:intergenic |
| CGGCGGCGGTGACACCATCG+TGG | 0.714804 | 1.1:+79984371 | MS.gene037303:CDS |
| AGGCTTACTGGAATAAGACG+GGG | 0.733611 | 1.1:-79989277 | None:intergenic |
| CCAAATCTGAGACTTATCAG+CGG | 0.743479 | 1.1:-79984464 | None:intergenic |
| AAAATAGTGCAATAACACTG+GGG | 0.776697 | 1.1:+79998388 | MS.gene037303:CDS |
| AAACTGGAGGAGTTTCACAG+TGG | 0.779982 | 1.1:+79985688 | MS.gene037303:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79984367 | 80000116 | 79984367 | ID=MS.gene037303 |
| chr1.1 | mRNA | 79984367 | 80000116 | 79984367 | ID=MS.gene037303.t1;Parent=MS.gene037303 |
| chr1.1 | exon | 79984367 | 79984558 | 79984367 | ID=MS.gene037303.t1.exon1;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79984367 | 79984558 | 79984367 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79985507 | 79985794 | 79985507 | ID=MS.gene037303.t1.exon2;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79985507 | 79985794 | 79985507 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79987430 | 79987519 | 79987430 | ID=MS.gene037303.t1.exon3;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79987430 | 79987519 | 79987430 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79987648 | 79987725 | 79987648 | ID=MS.gene037303.t1.exon4;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79987648 | 79987725 | 79987648 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79987826 | 79987906 | 79987826 | ID=MS.gene037303.t1.exon5;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79987826 | 79987906 | 79987826 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79988296 | 79988346 | 79988296 | ID=MS.gene037303.t1.exon6;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79988296 | 79988346 | 79988296 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79988753 | 79988838 | 79988753 | ID=MS.gene037303.t1.exon7;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79988753 | 79988838 | 79988753 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79989225 | 79989291 | 79989225 | ID=MS.gene037303.t1.exon8;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79989225 | 79989291 | 79989225 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79989378 | 79989434 | 79989378 | ID=MS.gene037303.t1.exon9;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79989378 | 79989434 | 79989378 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79989533 | 79989562 | 79989533 | ID=MS.gene037303.t1.exon10;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79989533 | 79989562 | 79989533 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79989637 | 79989696 | 79989637 | ID=MS.gene037303.t1.exon11;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79989637 | 79989696 | 79989637 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79989854 | 79989970 | 79989854 | ID=MS.gene037303.t1.exon12;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79989854 | 79989970 | 79989854 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79990257 | 79990370 | 79990257 | ID=MS.gene037303.t1.exon13;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79990257 | 79990370 | 79990257 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79991016 | 79991114 | 79991016 | ID=MS.gene037303.t1.exon14;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79991016 | 79991114 | 79991016 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79991574 | 79991699 | 79991574 | ID=MS.gene037303.t1.exon15;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79991574 | 79991699 | 79991574 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79991802 | 79991876 | 79991802 | ID=MS.gene037303.t1.exon16;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79991802 | 79991876 | 79991802 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79992035 | 79992106 | 79992035 | ID=MS.gene037303.t1.exon17;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79992035 | 79992106 | 79992035 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79992202 | 79992312 | 79992202 | ID=MS.gene037303.t1.exon18;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79992202 | 79992312 | 79992202 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79992814 | 79992897 | 79992814 | ID=MS.gene037303.t1.exon19;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79992814 | 79992897 | 79992814 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79993084 | 79993191 | 79993084 | ID=MS.gene037303.t1.exon20;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79993084 | 79993191 | 79993084 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79995463 | 79995564 | 79995463 | ID=MS.gene037303.t1.exon21;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79995463 | 79995564 | 79995463 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79995782 | 79995844 | 79995782 | ID=MS.gene037303.t1.exon22;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79995782 | 79995844 | 79995782 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79995924 | 79995998 | 79995924 | ID=MS.gene037303.t1.exon23;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79995924 | 79995998 | 79995924 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79998211 | 79998282 | 79998211 | ID=MS.gene037303.t1.exon24;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79998211 | 79998282 | 79998211 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79998366 | 79998490 | 79998366 | ID=MS.gene037303.t1.exon25;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79998366 | 79998490 | 79998366 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79999455 | 79999506 | 79999455 | ID=MS.gene037303.t1.exon26;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79999455 | 79999506 | 79999455 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79999590 | 79999658 | 79999590 | ID=MS.gene037303.t1.exon27;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79999590 | 79999658 | 79999590 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 79999742 | 79999801 | 79999742 | ID=MS.gene037303.t1.exon28;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 79999742 | 79999801 | 79999742 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| chr1.1 | exon | 80000033 | 80000116 | 80000033 | ID=MS.gene037303.t1.exon29;Parent=MS.gene037303.t1 |
| chr1.1 | CDS | 80000033 | 80000116 | 80000033 | ID=cds.MS.gene037303.t1;Parent=MS.gene037303.t1 |
| Gene Sequence |
| Protein sequence |
