Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014808.t1 | XP_013461890.1 | 99.5 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 2.70E-127 | 464.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014808.t1 | P38548 | 97.7 | 221 | 5 | 0 | 1 | 221 | 1 | 221 | 1.6e-128 | 459.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014808.t1 | I3S2M3 | 99.5 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 1.9e-127 | 464.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014808.t1 | MTR_3g107707 | 99.548 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 5.31e-168 | 461 |
MS.gene014808.t1 | MTR_3g107717 | 98.643 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 7.64e-167 | 458 |
MS.gene014808.t1 | MTR_3g107713 | 98.643 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 2.01e-166 | 457 |
MS.gene014808.t1 | MTR_4g113620 | 78.829 | 222 | 36 | 2 | 1 | 221 | 1 | 212 | 1.57e-127 | 358 |
MS.gene014808.t1 | MTR_4g098950 | 30.052 | 193 | 128 | 4 | 14 | 203 | 10 | 198 | 4.86e-27 | 103 |
MS.gene014808.t1 | MTR_8g031680 | 33.951 | 162 | 104 | 3 | 13 | 171 | 6 | 167 | 1.87e-26 | 101 |
MS.gene014808.t1 | MTR_4g088090 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 3.82e-26 | 100 |
MS.gene014808.t1 | MTR_5g013900 | 31.977 | 172 | 106 | 3 | 14 | 178 | 10 | 177 | 4.78e-26 | 100 |
MS.gene014808.t1 | MTR_3g064390 | 33.526 | 173 | 109 | 4 | 15 | 184 | 12 | 181 | 9.27e-26 | 99.8 |
MS.gene014808.t1 | MTR_8g103550 | 34.161 | 161 | 103 | 3 | 15 | 172 | 11 | 171 | 1.04e-25 | 99.4 |
MS.gene014808.t1 | MTR_8g031870 | 32.716 | 162 | 106 | 3 | 13 | 171 | 6 | 167 | 1.30e-25 | 99.0 |
MS.gene014808.t1 | MTR_2g014990 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 1.70e-25 | 99.4 |
MS.gene014808.t1 | MTR_8g092020 | 30.723 | 166 | 105 | 3 | 14 | 169 | 13 | 178 | 1.81e-25 | 99.0 |
MS.gene014808.t1 | MTR_1g097420 | 27.749 | 191 | 125 | 4 | 14 | 191 | 9 | 199 | 2.09e-25 | 99.0 |
MS.gene014808.t1 | MTR_1g029450 | 37.647 | 170 | 98 | 6 | 14 | 177 | 18 | 185 | 6.22e-25 | 97.8 |
MS.gene014808.t1 | MTR_4g064897 | 31.844 | 179 | 114 | 3 | 14 | 189 | 13 | 186 | 7.29e-25 | 97.8 |
MS.gene014808.t1 | MTR_8g089985 | 31.915 | 188 | 119 | 5 | 7 | 191 | 12 | 193 | 1.13e-24 | 97.4 |
MS.gene014808.t1 | MTR_8g093740 | 34.637 | 179 | 110 | 5 | 4 | 177 | 5 | 181 | 1.33e-24 | 96.7 |
MS.gene014808.t1 | MTR_3g087160 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.34e-24 | 96.7 |
MS.gene014808.t1 | MTR_4g079350 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 1.60e-24 | 96.7 |
MS.gene014808.t1 | MTR_3g069510 | 34.731 | 167 | 105 | 4 | 1 | 164 | 1 | 166 | 1.72e-24 | 96.7 |
MS.gene014808.t1 | MTR_1g068740 | 29.381 | 194 | 128 | 5 | 2 | 190 | 3 | 192 | 1.83e-24 | 96.7 |
MS.gene014808.t1 | MTR_5g076590 | 32.948 | 173 | 110 | 4 | 15 | 184 | 12 | 181 | 1.96e-24 | 96.3 |
MS.gene014808.t1 | MTR_6g079550 | 34.483 | 174 | 110 | 4 | 1 | 171 | 1 | 173 | 2.24e-24 | 96.3 |
MS.gene014808.t1 | MTR_1g068730 | 28.866 | 194 | 129 | 5 | 2 | 190 | 3 | 192 | 6.35e-24 | 95.1 |
MS.gene014808.t1 | MTR_2g083860 | 33.117 | 154 | 100 | 2 | 14 | 164 | 14 | 167 | 7.22e-24 | 95.1 |
MS.gene014808.t1 | MTR_2g090865 | 32.903 | 155 | 101 | 2 | 14 | 165 | 12 | 166 | 7.28e-24 | 95.1 |
MS.gene014808.t1 | MTR_1g115325 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 8.17e-24 | 94.7 |
MS.gene014808.t1 | MTR_8g090215 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.10e-23 | 94.4 |
MS.gene014808.t1 | MTR_2g005510 | 34.416 | 154 | 98 | 2 | 14 | 164 | 16 | 169 | 1.20e-23 | 94.7 |
MS.gene014808.t1 | MTR_3g086980 | 29.126 | 206 | 129 | 5 | 7 | 198 | 11 | 213 | 1.54e-23 | 94.4 |
MS.gene014808.t1 | MTR_7g100020 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 1.69e-23 | 94.0 |
MS.gene014808.t1 | MTR_2g075950 | 32.468 | 154 | 101 | 2 | 14 | 164 | 14 | 167 | 2.02e-23 | 94.0 |
MS.gene014808.t1 | MTR_3g096350 | 34.615 | 182 | 112 | 5 | 1 | 177 | 1 | 180 | 2.16e-23 | 93.6 |
MS.gene014808.t1 | MTR_6g021790 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 3.41e-23 | 93.2 |
MS.gene014808.t1 | MTR_8g036220 | 31.765 | 170 | 112 | 4 | 5 | 171 | 9 | 177 | 4.50e-23 | 93.2 |
MS.gene014808.t1 | MTR_8g031660 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 4.92e-23 | 92.8 |
MS.gene014808.t1 | MTR_8g031830 | 33.333 | 153 | 99 | 3 | 13 | 162 | 6 | 158 | 7.90e-23 | 92.0 |
MS.gene014808.t1 | MTR_2g102060 | 32.919 | 161 | 105 | 3 | 15 | 172 | 12 | 172 | 8.44e-23 | 91.7 |
MS.gene014808.t1 | MTR_7g103070 | 35.088 | 171 | 104 | 5 | 13 | 177 | 16 | 185 | 1.03e-22 | 92.0 |
MS.gene014808.t1 | MTR_7g081700 | 30.108 | 186 | 117 | 4 | 14 | 192 | 9 | 188 | 1.33e-22 | 91.3 |
MS.gene014808.t1 | MTR_4g069850 | 31.214 | 173 | 95 | 6 | 14 | 169 | 9 | 174 | 1.41e-22 | 91.3 |
MS.gene014808.t1 | MTR_4g012940 | 31.792 | 173 | 94 | 6 | 14 | 169 | 9 | 174 | 1.82e-22 | 91.3 |
MS.gene014808.t1 | MTR_8g006970 | 32.447 | 188 | 111 | 6 | 14 | 192 | 23 | 203 | 1.84e-22 | 91.3 |
MS.gene014808.t1 | MTR_7g405790 | 31.056 | 161 | 108 | 3 | 14 | 171 | 16 | 176 | 2.39e-22 | 91.3 |
MS.gene014808.t1 | MTR_2g101890 | 31.677 | 161 | 100 | 3 | 14 | 164 | 11 | 171 | 3.64e-22 | 90.5 |
MS.gene014808.t1 | MTR_2g096550 | 28.834 | 163 | 111 | 2 | 14 | 171 | 16 | 178 | 8.09e-22 | 89.7 |
MS.gene014808.t1 | MTR_4g063160 | 30.488 | 164 | 108 | 5 | 14 | 171 | 16 | 179 | 9.77e-22 | 89.4 |
MS.gene014808.t1 | MTR_8g107070 | 33.121 | 157 | 102 | 2 | 14 | 167 | 15 | 171 | 1.09e-21 | 90.5 |
MS.gene014808.t1 | MTR_8g027220 | 33.136 | 169 | 109 | 4 | 6 | 171 | 20 | 187 | 1.12e-21 | 89.7 |
MS.gene014808.t1 | MTR_1g062760 | 32.749 | 171 | 107 | 6 | 13 | 177 | 14 | 182 | 1.43e-21 | 89.0 |
MS.gene014808.t1 | MTR_8g006970 | 33.129 | 163 | 102 | 4 | 14 | 171 | 9 | 169 | 2.49e-21 | 87.4 |
MS.gene014808.t1 | MTR_1g052475 | 31.098 | 164 | 109 | 3 | 7 | 167 | 10 | 172 | 3.01e-21 | 88.2 |
MS.gene014808.t1 | MTR_0262s0050 | 32.716 | 162 | 105 | 4 | 9 | 167 | 12 | 172 | 3.49e-21 | 88.2 |
MS.gene014808.t1 | MTR_2g027660 | 31.646 | 158 | 105 | 2 | 14 | 168 | 7 | 164 | 4.02e-21 | 87.8 |
MS.gene014808.t1 | MTR_1g078200 | 30.114 | 176 | 117 | 5 | 1 | 171 | 1 | 175 | 1.53e-20 | 86.3 |
MS.gene014808.t1 | MTR_1g097420 | 27.072 | 181 | 119 | 4 | 24 | 191 | 46 | 226 | 1.74e-20 | 86.7 |
MS.gene014808.t1 | MTR_1g094220 | 29.193 | 161 | 110 | 3 | 15 | 171 | 33 | 193 | 5.94e-20 | 84.3 |
MS.gene014808.t1 | MTR_7g051940 | 28.571 | 161 | 112 | 3 | 14 | 171 | 14 | 174 | 6.08e-20 | 84.7 |
MS.gene014808.t1 | MTR_3g064390 | 33.071 | 127 | 84 | 1 | 15 | 140 | 12 | 138 | 9.76e-20 | 82.8 |
MS.gene014808.t1 | MTR_6g039490 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 1.33e-19 | 84.0 |
MS.gene014808.t1 | MTR_2g005500 | 30.061 | 163 | 107 | 4 | 14 | 171 | 10 | 170 | 1.37e-19 | 83.6 |
MS.gene014808.t1 | MTR_7g117910 | 36.434 | 129 | 80 | 2 | 7 | 134 | 15 | 142 | 3.33e-19 | 82.8 |
MS.gene014808.t1 | MTR_1g090717 | 29.442 | 197 | 123 | 7 | 10 | 199 | 13 | 200 | 1.00e-18 | 81.3 |
MS.gene014808.t1 | MTR_1g094220 | 29.012 | 162 | 107 | 4 | 15 | 168 | 33 | 194 | 1.32e-18 | 80.9 |
MS.gene014808.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 1.57e-18 | 80.5 |
MS.gene014808.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 3.20e-18 | 78.6 |
MS.gene014808.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 4.99e-18 | 77.8 |
MS.gene014808.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 7.42e-18 | 79.3 |
MS.gene014808.t1 | MTR_4g099470 | 30.128 | 156 | 100 | 4 | 42 | 192 | 13 | 164 | 1.60e-17 | 77.4 |
MS.gene014808.t1 | MTR_1g068730 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 2.40e-17 | 76.6 |
MS.gene014808.t1 | MTR_1g068740 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 4.04e-17 | 76.6 |
MS.gene014808.t1 | MTR_7g103070 | 36.066 | 122 | 73 | 3 | 61 | 177 | 8 | 129 | 1.81e-14 | 68.6 |
MS.gene014808.t1 | MTR_8g093740 | 35.246 | 122 | 74 | 3 | 61 | 177 | 27 | 148 | 2.27e-14 | 68.9 |
MS.gene014808.t1 | MTR_4g088055 | 27.879 | 165 | 104 | 4 | 14 | 164 | 7 | 170 | 3.02e-14 | 68.9 |
MS.gene014808.t1 | MTR_8g075240 | 28.485 | 165 | 103 | 4 | 14 | 164 | 7 | 170 | 5.06e-14 | 68.6 |
MS.gene014808.t1 | MTR_6g087980 | 33.051 | 118 | 77 | 2 | 14 | 130 | 7 | 123 | 6.89e-14 | 68.2 |
MS.gene014808.t1 | MTR_5g092060 | 26.012 | 173 | 121 | 1 | 10 | 175 | 101 | 273 | 1.98e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014808.t1 | AT5G55190 | 96.833 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 7.06e-164 | 451 |
MS.gene014808.t1 | AT5G20010 | 95.475 | 221 | 10 | 0 | 1 | 221 | 1 | 221 | 4.52e-161 | 444 |
MS.gene014808.t1 | AT5G20020 | 95.023 | 221 | 11 | 0 | 1 | 221 | 1 | 221 | 1.35e-152 | 422 |
MS.gene014808.t1 | AT5G55080 | 70.283 | 212 | 58 | 1 | 1 | 212 | 1 | 207 | 1.31e-108 | 311 |
MS.gene014808.t1 | AT4G39890 | 36.158 | 177 | 103 | 4 | 14 | 186 | 10 | 180 | 4.71e-28 | 105 |
MS.gene014808.t1 | AT1G07410 | 31.551 | 187 | 120 | 3 | 14 | 197 | 13 | 194 | 4.33e-26 | 100 |
MS.gene014808.t1 | AT4G19640 | 33.514 | 185 | 116 | 5 | 15 | 195 | 12 | 193 | 5.08e-26 | 100 |
MS.gene014808.t1 | AT2G44610 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 9.58e-26 | 99.8 |
MS.gene014808.t1 | AT4G18430 | 32.298 | 161 | 106 | 3 | 14 | 171 | 14 | 174 | 2.39e-25 | 99.0 |
MS.gene014808.t1 | AT5G45130 | 33.140 | 172 | 109 | 4 | 15 | 183 | 12 | 180 | 2.47e-25 | 98.6 |
MS.gene014808.t1 | AT5G39620 | 32.335 | 167 | 103 | 3 | 14 | 170 | 6 | 172 | 3.21e-25 | 98.2 |
MS.gene014808.t1 | AT5G59150 | 34.731 | 167 | 105 | 3 | 1 | 164 | 1 | 166 | 7.65e-25 | 97.8 |
MS.gene014808.t1 | AT5G45750 | 35.256 | 156 | 94 | 3 | 14 | 164 | 14 | 167 | 9.64e-25 | 97.4 |
MS.gene014808.t1 | AT4G18800 | 32.597 | 181 | 110 | 4 | 14 | 189 | 14 | 187 | 1.50e-24 | 96.7 |
MS.gene014808.t1 | AT1G09630 | 34.132 | 167 | 106 | 3 | 1 | 164 | 1 | 166 | 1.62e-24 | 96.7 |
MS.gene014808.t1 | AT2G21880 | 30.909 | 165 | 104 | 3 | 14 | 168 | 10 | 174 | 1.89e-24 | 96.7 |
MS.gene014808.t1 | AT5G65270 | 31.217 | 189 | 121 | 5 | 6 | 191 | 11 | 193 | 2.79e-24 | 96.3 |
MS.gene014808.t1 | AT5G60860 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 3.08e-24 | 96.3 |
MS.gene014808.t1 | AT2G22290 | 32.515 | 163 | 107 | 3 | 14 | 173 | 10 | 172 | 3.39e-24 | 95.9 |
MS.gene014808.t1 | AT1G18200 | 32.919 | 161 | 105 | 3 | 14 | 171 | 14 | 174 | 3.41e-24 | 96.3 |
MS.gene014808.t1 | AT4G09720 | 29.240 | 171 | 106 | 3 | 14 | 169 | 9 | 179 | 3.78e-24 | 95.9 |
MS.gene014808.t1 | AT4G39990 | 33.333 | 168 | 104 | 4 | 9 | 171 | 14 | 178 | 4.57e-24 | 95.9 |
MS.gene014808.t1 | AT3G15060 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 4.60e-24 | 95.5 |
MS.gene014808.t1 | AT4G09720 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 5.05e-24 | 95.1 |
MS.gene014808.t1 | AT3G18820 | 30.882 | 204 | 113 | 7 | 14 | 200 | 9 | 201 | 6.04e-24 | 95.1 |
MS.gene014808.t1 | AT1G22740 | 29.630 | 189 | 120 | 6 | 14 | 189 | 9 | 197 | 6.21e-24 | 95.1 |
MS.gene014808.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene014808.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene014808.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene014808.t1 | AT5G59840 | 29.319 | 191 | 123 | 5 | 14 | 196 | 16 | 202 | 6.65e-24 | 95.1 |
MS.gene014808.t1 | AT5G10260 | 32.738 | 168 | 110 | 3 | 14 | 178 | 10 | 177 | 1.29e-23 | 94.4 |
MS.gene014808.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene014808.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene014808.t1 | AT5G45130 | 32.353 | 170 | 109 | 4 | 17 | 183 | 22 | 188 | 1.63e-23 | 94.0 |
MS.gene014808.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene014808.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene014808.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene014808.t1 | AT4G09720 | 28.249 | 177 | 106 | 3 | 14 | 169 | 9 | 185 | 2.36e-23 | 94.0 |
MS.gene014808.t1 | AT4G17530 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 5.18e-23 | 92.4 |
MS.gene014808.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 6.45e-23 | 92.4 |
MS.gene014808.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 6.45e-23 | 92.4 |
MS.gene014808.t1 | AT5G47200 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 7.26e-23 | 92.0 |
MS.gene014808.t1 | AT1G73640 | 32.544 | 169 | 110 | 4 | 6 | 171 | 7 | 174 | 9.00e-23 | 92.8 |
MS.gene014808.t1 | AT3G12160 | 32.927 | 164 | 106 | 4 | 7 | 167 | 10 | 172 | 9.85e-23 | 92.4 |
MS.gene014808.t1 | AT5G47960 | 33.951 | 162 | 103 | 4 | 7 | 165 | 10 | 170 | 9.95e-23 | 92.4 |
MS.gene014808.t1 | AT5G64990 | 28.079 | 203 | 124 | 6 | 14 | 203 | 8 | 201 | 1.59e-22 | 91.3 |
MS.gene014808.t1 | AT2G33870 | 30.270 | 185 | 123 | 4 | 14 | 192 | 14 | 198 | 1.89e-22 | 91.3 |
MS.gene014808.t1 | AT3G16100 | 29.798 | 198 | 123 | 5 | 14 | 200 | 9 | 201 | 2.09e-22 | 90.9 |
MS.gene014808.t1 | AT1G28550 | 29.730 | 185 | 124 | 4 | 14 | 192 | 14 | 198 | 2.28e-22 | 91.3 |
MS.gene014808.t1 | AT1G06400 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 2.41e-22 | 91.3 |
MS.gene014808.t1 | AT1G02130 | 30.811 | 185 | 118 | 5 | 14 | 192 | 9 | 189 | 3.18e-22 | 90.5 |
MS.gene014808.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.35e-22 | 90.5 |
MS.gene014808.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.35e-22 | 90.5 |
MS.gene014808.t1 | AT1G52280 | 29.293 | 198 | 124 | 6 | 14 | 200 | 9 | 201 | 4.14e-22 | 90.1 |
MS.gene014808.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene014808.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene014808.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene014808.t1 | AT1G16920 | 31.818 | 154 | 102 | 2 | 14 | 164 | 14 | 167 | 4.76e-22 | 90.5 |
MS.gene014808.t1 | AT2G43130 | 27.461 | 193 | 136 | 4 | 14 | 203 | 13 | 204 | 7.02e-22 | 89.7 |
MS.gene014808.t1 | AT4G35860 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 7.55e-22 | 89.7 |
MS.gene014808.t1 | AT1G01200 | 31.953 | 169 | 110 | 4 | 7 | 171 | 23 | 190 | 1.00e-21 | 90.1 |
MS.gene014808.t1 | AT4G17160 | 30.380 | 158 | 107 | 2 | 14 | 168 | 7 | 164 | 3.11e-21 | 87.8 |
MS.gene014808.t1 | AT4G17170 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 6.21e-21 | 87.4 |
MS.gene014808.t1 | AT3G07410 | 29.310 | 174 | 120 | 3 | 14 | 184 | 13 | 186 | 1.16e-20 | 86.7 |
MS.gene014808.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 13 | 166 | 1.31e-20 | 86.7 |
MS.gene014808.t1 | AT5G47520 | 30.435 | 161 | 109 | 3 | 14 | 171 | 15 | 175 | 1.42e-20 | 86.7 |
MS.gene014808.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 59 | 212 | 3.80e-20 | 86.3 |
MS.gene014808.t1 | AT4G19640 | 35.938 | 128 | 80 | 2 | 15 | 140 | 12 | 139 | 5.33e-20 | 83.2 |
MS.gene014808.t1 | AT4G19640 | 34.043 | 141 | 90 | 3 | 15 | 152 | 12 | 152 | 6.69e-20 | 84.0 |
MS.gene014808.t1 | AT5G64990 | 27.143 | 210 | 124 | 7 | 14 | 203 | 8 | 208 | 8.72e-20 | 84.3 |
MS.gene014808.t1 | AT3G54840 | 29.814 | 161 | 109 | 4 | 15 | 171 | 35 | 195 | 9.45e-20 | 84.0 |
MS.gene014808.t1 | AT5G03520 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 1.66e-19 | 83.6 |
MS.gene014808.t1 | AT2G31680 | 29.193 | 161 | 111 | 3 | 14 | 171 | 13 | 173 | 1.68e-19 | 83.6 |
MS.gene014808.t1 | AT3G11730 | 28.108 | 185 | 126 | 3 | 14 | 191 | 9 | 193 | 2.80e-19 | 82.8 |
MS.gene014808.t1 | AT3G54840 | 29.375 | 160 | 109 | 4 | 16 | 171 | 2 | 161 | 3.55e-19 | 81.6 |
MS.gene014808.t1 | AT3G09900 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 3.68e-19 | 82.8 |
MS.gene014808.t1 | AT3G54840 | 30.519 | 154 | 103 | 4 | 15 | 164 | 35 | 188 | 1.61e-18 | 80.5 |
MS.gene014808.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene014808.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene014808.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene014808.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.62e-17 | 77.0 |
MS.gene014808.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.62e-17 | 77.0 |
MS.gene014808.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.83e-17 | 75.9 |
MS.gene014808.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.83e-17 | 75.9 |
MS.gene014808.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene014808.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene014808.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene014808.t1 | AT2G21880 | 29.091 | 165 | 99 | 5 | 14 | 168 | 10 | 166 | 3.62e-16 | 74.3 |
MS.gene014808.t1 | AT4G35860 | 31.858 | 113 | 74 | 2 | 62 | 171 | 9 | 121 | 5.95e-15 | 70.1 |
MS.gene014808.t1 | AT5G03520 | 29.323 | 133 | 86 | 4 | 61 | 189 | 53 | 181 | 6.58e-15 | 70.9 |
MS.gene014808.t1 | AT5G59150 | 33.962 | 106 | 67 | 2 | 62 | 164 | 10 | 115 | 5.65e-14 | 67.8 |
MS.gene014808.t1 | AT4G35950 | 29.697 | 165 | 101 | 4 | 14 | 164 | 7 | 170 | 6.44e-14 | 68.2 |
MS.gene014808.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 9.02e-14 | 67.8 |
MS.gene014808.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 9.02e-14 | 67.8 |
MS.gene014808.t1 | AT3G51300 | 32.203 | 118 | 78 | 2 | 15 | 131 | 8 | 124 | 1.07e-13 | 67.4 |
MS.gene014808.t1 | AT4G28950 | 28.834 | 163 | 103 | 4 | 14 | 164 | 7 | 168 | 1.36e-13 | 67.4 |
MS.gene014808.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.65e-11 | 58.5 |
MS.gene014808.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.65e-11 | 58.5 |
Find 59 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAAATCAATTTGAACTTC+TGG | 0.258290 | 3.3:+88046707 | None:intergenic |
GATTCTACAAAGTGCAAGTT+AGG | 0.300639 | 3.3:+88046746 | None:intergenic |
ACCAGAAGTTCAAATTGATT+TGG | 0.314372 | 3.3:-88046708 | MS.gene014808:CDS |
TTTGTGAAGAGGCATCTTAC+TGG | 0.332899 | 3.3:-88048193 | MS.gene014808:CDS |
TACCTTGCTAGGAAGCTTGC+AGG | 0.343483 | 3.3:-88046871 | MS.gene014808:CDS |
TAATCAACGGTTTGCTGATT+GGG | 0.345570 | 3.3:+88048422 | None:intergenic |
GCAAGATTCGCTTCTACTGC+TGG | 0.380027 | 3.3:-88047988 | MS.gene014808:CDS |
GAAGGGGTTGATTGGCAGCT+TGG | 0.435439 | 3.3:+88046082 | None:intergenic |
GTAATCAACGGTTTGCTGAT+TGG | 0.439788 | 3.3:+88048421 | None:intergenic |
CCTGGCACCGTGATCTTTGT+CGG | 0.450109 | 3.3:-88047159 | MS.gene014808:intron |
GTCATCAGGAAGGGGTTGAT+TGG | 0.454313 | 3.3:+88046074 | None:intergenic |
CTTTGTAGAATCTCCTGCAT+TGG | 0.466850 | 3.3:-88046735 | MS.gene014808:CDS |
CAGGCAAGTGAAGGCAAAGC+AGG | 0.468849 | 3.3:-88046974 | MS.gene014808:CDS |
GGATTGTAAACAGCTACAAT+TGG | 0.470488 | 3.3:-88048049 | MS.gene014808:intron |
ACTGCTGGACAAGAGAAGTT+TGG | 0.471338 | 3.3:-88047962 | MS.gene014808:CDS |
ACAAGGTTGATGTGAAGAAC+AGG | 0.475162 | 3.3:-88046993 | MS.gene014808:CDS |
CGATGACAAGCTTGAAGCTC+GGG | 0.476801 | 3.3:+88048399 | None:intergenic |
AACATCCCAATCGTTCTTTG+CGG | 0.486118 | 3.3:-88047018 | MS.gene014808:CDS |
ATCGTCGGCGATGGCGGCAC+TGG | 0.486311 | 3.3:-88048380 | MS.gene014808:intron |
CTTGTCATCGTCGGCGATGG+CGG | 0.488335 | 3.3:-88048386 | MS.gene014808:CDS |
AATGCATCATCATCGTCATC+AGG | 0.495924 | 3.3:+88046060 | None:intergenic |
CAAGCTTCCTAGCAAGGTAA+AGG | 0.519388 | 3.3:+88046875 | None:intergenic |
CTTTATATTGCAGTATCCAC+GGG | 0.523043 | 3.3:-88047240 | MS.gene014808:intron |
CCGACAAAGATCACGGTGCC+AGG | 0.524098 | 3.3:+88047159 | None:intergenic |
AAGCTTGTCATCGTCGGCGA+TGG | 0.529447 | 3.3:-88048389 | MS.gene014808:CDS |
TCTTTATATTGCAGTATCCA+CGG | 0.531789 | 3.3:-88047241 | MS.gene014808:intron |
ACTTCTGGTGGAGCCAATGC+AGG | 0.537856 | 3.3:+88046722 | None:intergenic |
AGCTTCAAGCTTGTCATCGT+CGG | 0.540576 | 3.3:-88048395 | MS.gene014808:CDS |
TTGTTACCGCAAAGAACGAT+TGG | 0.542917 | 3.3:+88047012 | None:intergenic |
AAGTTTGGTGGTCTCAGAGA+TGG | 0.543632 | 3.3:-88047947 | MS.gene014808:CDS |
TTCTACTGCTGGGATACTGC+TGG | 0.543775 | 3.3:-88047977 | MS.gene014808:CDS |
CAAAGCAGGTTACTTTCCAC+AGG | 0.547056 | 3.3:-88046960 | MS.gene014808:CDS |
CATCATCATCGTCATCAGGA+AGG | 0.549641 | 3.3:+88046064 | None:intergenic |
ATCATCATCGTCATCAGGAA+GGG | 0.552321 | 3.3:+88046065 | None:intergenic |
TGTTACCGCAAAGAACGATT+GGG | 0.553176 | 3.3:+88047013 | None:intergenic |
AGCCATTCCTTTACCTTGCT+AGG | 0.553251 | 3.3:-88046882 | MS.gene014808:CDS |
AATCGTTCTTTGCGGTAACA+AGG | 0.561403 | 3.3:-88047010 | MS.gene014808:CDS |
AAATCAATTTGAACTTCTGG+TGG | 0.563330 | 3.3:+88046710 | None:intergenic |
CAAGATTCGCTTCTACTGCT+GGG | 0.564996 | 3.3:-88047987 | MS.gene014808:CDS |
ACTGCAAATTCTTCTTCCTG+TGG | 0.574961 | 3.3:+88046944 | None:intergenic |
TTGATTTGGCTGCACAACAA+AGG | 0.579779 | 3.3:-88046694 | MS.gene014808:intron |
CTTGAAGCTCGGGTAATCAA+CGG | 0.586019 | 3.3:+88048409 | None:intergenic |
ACCCTGCAAGCTTCCTAGCA+AGG | 0.586472 | 3.3:+88046869 | None:intergenic |
TTGGATTTCTTCACAAACTG+CGG | 0.590990 | 3.3:-88048010 | MS.gene014808:CDS |
ACGATGACAAGCTTGAAGCT+CGG | 0.595291 | 3.3:+88048398 | None:intergenic |
GAAAGACAACATTTGTGAAG+AGG | 0.596908 | 3.3:-88048204 | MS.gene014808:CDS |
ATTCTACAAAGTGCAAGTTA+GGG | 0.598867 | 3.3:+88046747 | None:intergenic |
TGGTGTGGAAGTGCATCCAT+TGG | 0.604734 | 3.3:-88048029 | MS.gene014808:CDS |
TTCCTAGCAAGGTAAAGGAA+TGG | 0.606313 | 3.3:+88046880 | None:intergenic |
CAAAGATCACGGTGCCAGGT+AGG | 0.607872 | 3.3:+88047163 | None:intergenic |
CAGTTTGTGAAGAAATCCAA+TGG | 0.610326 | 3.3:+88048013 | None:intergenic |
ACCTTGCTAGGAAGCTTGCA+GGG | 0.610380 | 3.3:-88046870 | MS.gene014808:intron |
TGTGAAGAACAGGCAAGTGA+AGG | 0.615131 | 3.3:-88046983 | MS.gene014808:CDS |
GCTGGACAAGAGAAGTTTGG+TGG | 0.616663 | 3.3:-88047959 | MS.gene014808:CDS |
TCATCATCGTCATCAGGAAG+GGG | 0.618873 | 3.3:+88046066 | None:intergenic |
TTATAATAGCACATTGCCCG+TGG | 0.636385 | 3.3:+88047224 | None:intergenic |
CGATGATGATGCATTTGAGT+AGG | 0.644342 | 3.3:-88046052 | None:intergenic |
GTAAACAGCTACAATTGGTG+TGG | 0.644898 | 3.3:-88048044 | MS.gene014808:intron |
TTACTAACCGACAAAGATCA+CGG | 0.655820 | 3.3:+88047152 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATACAAACTATTATTA+TGG | - | chr3.3:88048106-88048125 | MS.gene014808:intron | 10.0% |
!! | AAAAAAAAAGTCAACATTTA+TGG | + | chr3.3:88047073-88047092 | None:intergenic | 15.0% |
!!! | AATGATCATTTTTTTTTTAC+AGG | - | chr3.3:88046347-88046366 | MS.gene014808:intron | 15.0% |
!!! | ATTTTGAATTTCTCATTTAT+TGG | - | chr3.3:88048439-88048458 | MS.gene014808:intron | 15.0% |
!!! | GTAAGATTCATTTTAATTTA+GGG | - | chr3.3:88046426-88046445 | MS.gene014808:intron | 15.0% |
!!! | TATTTATAATCTGATTTGAT+TGG | - | chr3.3:88046503-88046522 | MS.gene014808:intron | 15.0% |
!!! | TTTTTTTTTCGTGTTAATAA+GGG | - | chr3.3:88047085-88047104 | MS.gene014808:intron | 15.0% |
!!! | TTTTTTTTTTCGTGTTAATA+AGG | - | chr3.3:88047084-88047103 | MS.gene014808:intron | 15.0% |
!! | AGAGATTGAAAATAAATTTC+TGG | - | chr3.3:88048198-88048217 | MS.gene014808:CDS | 20.0% |
!! | AGATTGAAAATAAATTTCTG+GGG | - | chr3.3:88048200-88048219 | MS.gene014808:CDS | 20.0% |
!! | ATTCTATGTTACATATTTCA+CGG | + | chr3.3:88046270-88046289 | None:intergenic | 20.0% |
!! | GAGATTGAAAATAAATTTCT+GGG | - | chr3.3:88048199-88048218 | MS.gene014808:CDS | 20.0% |
!! | GATATTCCTAAAAAAACTAA+TGG | + | chr3.3:88048367-88048386 | None:intergenic | 20.0% |
!! | TATCATTAGTTATACATCAT+TGG | - | chr3.3:88048226-88048245 | MS.gene014808:intron | 20.0% |
!! | TTAACAAGCATGATTATATA+CGG | - | chr3.3:88046449-88046468 | MS.gene014808:intron | 20.0% |
!! | TTGTAGGATAAAGAATAAAA+AGG | + | chr3.3:88047925-88047944 | None:intergenic | 20.0% |
!!! | AAAAAAACTAATGGATGTTA+TGG | + | chr3.3:88048358-88048377 | None:intergenic | 20.0% |
!!! | AATTGTTATTGTTAATCGAA+CGG | + | chr3.3:88046104-88046123 | None:intergenic | 20.0% |
!!! | CGTAAGATTCATTTTAATTT+AGG | - | chr3.3:88046425-88046444 | MS.gene014808:intron | 20.0% |
!!! | TAACATCCATTAGTTTTTTT+AGG | - | chr3.3:88048358-88048377 | MS.gene014808:intron | 20.0% |
! | ACTAAAAAAAGAAGCGATAA+AGG | + | chr3.3:88046241-88046260 | None:intergenic | 25.0% |
! | AGTGTTAAAAAAAGGTTTCA+AGG | + | chr3.3:88047454-88047473 | None:intergenic | 25.0% |
! | ATGCATTTAAATAAATGACG+AGG | + | chr3.3:88046666-88046685 | None:intergenic | 25.0% |
! | CAAAATACTGATAAATGCAA+GGG | + | chr3.3:88047133-88047152 | None:intergenic | 25.0% |
! | TAAATTCATAGTTGAAGTGA+AGG | + | chr3.3:88046950-88046969 | None:intergenic | 25.0% |
! | TAATATGTTCATTGTAGCAT+TGG | - | chr3.3:88047964-88047983 | MS.gene014808:CDS | 25.0% |
! | TACTGCAATATAAAGATAAC+AGG | + | chr3.3:88047328-88047347 | None:intergenic | 25.0% |
! | TCATTATCATAATATTGTGC+TGG | - | chr3.3:88047047-88047066 | MS.gene014808:intron | 25.0% |
!! | AACATTTTTGTATGTTAGAC+GGG | + | chr3.3:88047390-88047409 | None:intergenic | 25.0% |
!! | CCAAACAAAGTGTTAAAAAA+AGG | + | chr3.3:88047462-88047481 | None:intergenic | 25.0% |
!! | CTTGCATTTATCAGTATTTT+GGG | - | chr3.3:88047132-88047151 | MS.gene014808:intron | 25.0% |
!! | GAACATTTTTGTATGTTAGA+CGG | + | chr3.3:88047391-88047410 | None:intergenic | 25.0% |
!! | GATTGAAAATAAATTTCTGG+GGG | - | chr3.3:88048201-88048220 | MS.gene014808:CDS | 25.0% |
!!! | CCTTTTTTTAACACTTTGTT+TGG | - | chr3.3:88047459-88047478 | MS.gene014808:intron | 25.0% |
!!! | TGTCTTTTTGATGACATAAT+AGG | - | chr3.3:88047249-88047268 | MS.gene014808:intron | 25.0% |
!!! | TTTTTTGTGCCAATATTACA+TGG | - | chr3.3:88047001-88047020 | MS.gene014808:CDS | 25.0% |
AAAAGAAGCGATAAAGGAAA+AGG | + | chr3.3:88046235-88046254 | None:intergenic | 30.0% | |
AAATCAATTTGAACTTCTGG+TGG | + | chr3.3:88047866-88047885 | None:intergenic | 30.0% | |
ACCAGAAGTTCAAATTGATT+TGG | - | chr3.3:88047865-88047884 | MS.gene014808:intron | 30.0% | |
AGGAAAAGGAAAAAAGAGAT+TGG | + | chr3.3:88046221-88046240 | None:intergenic | 30.0% | |
ATAAAGCAACATAAGGAACA+TGG | + | chr3.3:88047495-88047514 | None:intergenic | 30.0% | |
ATCCTACAATCATTCATCAT+TGG | - | chr3.3:88047936-88047955 | MS.gene014808:intron | 30.0% | |
ATTCTACAAAGTGCAAGTTA+GGG | + | chr3.3:88047829-88047848 | None:intergenic | 30.0% | |
CCAAAATACTGATAAATGCA+AGG | + | chr3.3:88047134-88047153 | None:intergenic | 30.0% | |
CGTAGTCATTATATATGTGT+CGG | - | chr3.3:88047226-88047245 | MS.gene014808:CDS | 30.0% | |
GTAATATTGGCACAAAAAAC+AGG | + | chr3.3:88047000-88047019 | None:intergenic | 30.0% | |
GTTAAATCAAATGATCCATG+TGG | - | chr3.3:88046862-88046881 | MS.gene014808:intron | 30.0% | |
TAAGTGATATACAAACCACA+TGG | + | chr3.3:88046880-88046899 | None:intergenic | 30.0% | |
TATAACCCTCATATCAATGA+TGG | + | chr3.3:88048040-88048059 | None:intergenic | 30.0% | |
TCTTTATATTGCAGTATCCA+CGG | - | chr3.3:88047332-88047351 | MS.gene014808:intron | 30.0% | |
! | ATTGTAGCATTGGAAAATAG+TGG | - | chr3.3:88047974-88047993 | MS.gene014808:CDS | 30.0% |
! | CATGGATCATTTGATTTAAC+AGG | + | chr3.3:88046862-88046881 | None:intergenic | 30.0% |
! | CCTTGCATTTATCAGTATTT+TGG | - | chr3.3:88047131-88047150 | MS.gene014808:intron | 30.0% |
!! | ATGTTCCTTATGTTGCTTTA+TGG | - | chr3.3:88047494-88047513 | MS.gene014808:intron | 30.0% |
!! | ATTGATTTGGAAGTGAACTT+TGG | - | chr3.3:88046314-88046333 | MS.gene014808:intron | 30.0% |
!! | CAACAAAGGTAAGCTATTTT+TGG | - | chr3.3:88047893-88047912 | MS.gene014808:intron | 30.0% |
!! | CTATTTGGAACTGATTTTCA+GGG | - | chr3.3:88047524-88047543 | MS.gene014808:intron | 30.0% |
!! | TGTGTTCTCAAGTTTTTAAG+TGG | - | chr3.3:88046827-88046846 | MS.gene014808:intron | 30.0% |
!!! | TTTTTTCGTGTTAATAAGGG+TGG | - | chr3.3:88047088-88047107 | MS.gene014808:intron | 30.0% |
AACAGGGAATTTGGTTAAAC+AGG | + | chr3.3:88046738-88046757 | None:intergenic | 35.0% | |
AAGTGTTACATAAACCGAAC+AGG | + | chr3.3:88046755-88046774 | None:intergenic | 35.0% | |
ACACAGCATTTAAACTCATG+AGG | + | chr3.3:88048140-88048159 | None:intergenic | 35.0% | |
AGTGTCCATAAAGCAACATA+AGG | + | chr3.3:88047502-88047521 | None:intergenic | 35.0% | |
AGTGTTACATAAACCGAACA+GGG | + | chr3.3:88046754-88046773 | None:intergenic | 35.0% | |
ATTGTTAATCGAACGGCAAA+AGG | + | chr3.3:88046097-88046116 | None:intergenic | 35.0% | |
CAAAAGGAATAGCGTGAAAT+CGG | + | chr3.3:88046081-88046100 | None:intergenic | 35.0% | |
CACAACCATCATTGATATGA+GGG | - | chr3.3:88048032-88048051 | MS.gene014808:CDS | 35.0% | |
CAGTTTGTGAAGAAATCCAA+TGG | + | chr3.3:88046563-88046582 | None:intergenic | 35.0% | |
CATACAAAAATGTTCCTACC+TGG | - | chr3.3:88047396-88047415 | MS.gene014808:intron | 35.0% | |
CATAGAATCAGTGATTCGTT+AGG | - | chr3.3:88046282-88046301 | MS.gene014808:intron | 35.0% | |
CCTGAAAATCAGTTCCAAAT+AGG | + | chr3.3:88047526-88047545 | None:intergenic | 35.0% | |
CGTAGTGGTTATATACATGT+CGG | - | chr3.3:88047179-88047198 | MS.gene014808:CDS | 35.0% | |
CTTTATATTGCAGTATCCAC+GGG | - | chr3.3:88047333-88047352 | MS.gene014808:intron | 35.0% | |
CTTTATGGACACTTCCTATT+TGG | - | chr3.3:88047509-88047528 | MS.gene014808:intron | 35.0% | |
GAAAGACAACATTTGTGAAG+AGG | - | chr3.3:88046369-88046388 | MS.gene014808:intron | 35.0% | |
GACATAATAGGATTCTCCTT+CGG | - | chr3.3:88047261-88047280 | MS.gene014808:intron | 35.0% | |
GATTCTACAAAGTGCAAGTT+AGG | + | chr3.3:88047830-88047849 | None:intergenic | 35.0% | |
GCCAAATCAATTTGAACTTC+TGG | + | chr3.3:88047869-88047888 | None:intergenic | 35.0% | |
GGATTGTAAACAGCTACAAT+TGG | - | chr3.3:88046524-88046543 | MS.gene014808:intron | 35.0% | |
GTATTGCATATTCCTAAACG+AGG | + | chr3.3:88048320-88048339 | None:intergenic | 35.0% | |
GTTTAACCAAATTCCCTGTT+CGG | - | chr3.3:88046738-88046757 | MS.gene014808:CDS | 35.0% | |
TCACAACCATCATTGATATG+AGG | - | chr3.3:88048031-88048050 | MS.gene014808:CDS | 35.0% | |
TGCAACACACCATGTAATAT+TGG | + | chr3.3:88047013-88047032 | None:intergenic | 35.0% | |
TGCCAATGATGAATGATTGT+AGG | + | chr3.3:88047941-88047960 | None:intergenic | 35.0% | |
TTACTAACCGACAAAGATCA+CGG | + | chr3.3:88047424-88047443 | None:intergenic | 35.0% | |
TTGGATTTCTTCACAAACTG+CGG | - | chr3.3:88046563-88046582 | MS.gene014808:intron | 35.0% | |
! | ACACGTGGATTAATGTTCAA+CGG | + | chr3.3:88048264-88048283 | None:intergenic | 35.0% |
! | TAGGATCTGGCATATTGATT+TGG | - | chr3.3:88046301-88046320 | MS.gene014808:intron | 35.0% |
!! | CCTATTTGGAACTGATTTTC+AGG | - | chr3.3:88047523-88047542 | MS.gene014808:intron | 35.0% |
!! | GGTTGTGAGACTTTGATTTT+AGG | + | chr3.3:88048019-88048038 | None:intergenic | 35.0% |
!! | TAATAAGGGTGGTTGTTTCT+TGG | - | chr3.3:88047099-88047118 | MS.gene014808:intron | 35.0% |
!! | TAATCAACGGTTTGCTGATT+GGG | + | chr3.3:88046154-88046173 | None:intergenic | 35.0% |
!! | TTTCTAGTTTCTACACAGTC+AGG | - | chr3.3:88047737-88047756 | MS.gene014808:intron | 35.0% |
!!! | CTTGTTTTTGAGCAATCTTG+TGG | - | chr3.3:88046709-88046728 | MS.gene014808:CDS | 35.0% |
AACATCCCAATCGTTCTTTG+CGG | - | chr3.3:88047555-88047574 | MS.gene014808:intron | 40.0% | |
AATCGTTCTTTGCGGTAACA+AGG | - | chr3.3:88047563-88047582 | MS.gene014808:intron | 40.0% | |
AATGCATCATCATCGTCATC+AGG | + | chr3.3:88048516-88048535 | None:intergenic | 40.0% | |
ACTGCAAATTCTTCTTCCTG+TGG | + | chr3.3:88047632-88047651 | None:intergenic | 40.0% | |
AGGGATGATGAAAAAACACG+TGG | + | chr3.3:88048279-88048298 | None:intergenic | 40.0% | |
ATCAGTGATTCGTTAGGATC+TGG | - | chr3.3:88046288-88046307 | MS.gene014808:intron | 40.0% | |
ATCATCATCGTCATCAGGAA+GGG | + | chr3.3:88048511-88048530 | None:intergenic | 40.0% | |
CATAAACCGAACAGGGAATT+TGG | + | chr3.3:88046747-88046766 | None:intergenic | 40.0% | |
CTTTGTAGAATCTCCTGCAT+TGG | - | chr3.3:88047838-88047857 | MS.gene014808:intron | 40.0% | |
GTAAACAGCTACAATTGGTG+TGG | - | chr3.3:88046529-88046548 | MS.gene014808:intron | 40.0% | |
TCAATTGCTTGCTTTCGTAG+TGG | - | chr3.3:88047164-88047183 | MS.gene014808:CDS | 40.0% | |
TGTTACCGCAAAGAACGATT+GGG | + | chr3.3:88047563-88047582 | None:intergenic | 40.0% | |
TTATAATAGCACATTGCCCG+TGG | + | chr3.3:88047352-88047371 | None:intergenic | 40.0% | |
TTCCTAGCAAGGTAAAGGAA+TGG | + | chr3.3:88047696-88047715 | None:intergenic | 40.0% | |
TTGCATATTCCTAAACGAGG+CGG | + | chr3.3:88048317-88048336 | None:intergenic | 40.0% | |
TTGTTACCGCAAAGAACGAT+TGG | + | chr3.3:88047564-88047583 | None:intergenic | 40.0% | |
! | TCATCGTGTTTTTCTTCTGC+AGG | - | chr3.3:88046123-88046142 | MS.gene014808:intron | 40.0% |
!! | ACAAGGTTGATGTGAAGAAC+AGG | - | chr3.3:88047580-88047599 | MS.gene014808:intron | 40.0% |
!! | GTAATCAACGGTTTGCTGAT+TGG | + | chr3.3:88046155-88046174 | None:intergenic | 40.0% |
!! | TTGATTTGGCTGCACAACAA+AGG | - | chr3.3:88047879-88047898 | MS.gene014808:intron | 40.0% |
!! | TTTGTGAAGAGGCATCTTAC+TGG | - | chr3.3:88046380-88046399 | MS.gene014808:intron | 40.0% |
AAACGAGGCGGATAAAAGGA+AGG | + | chr3.3:88048305-88048324 | None:intergenic | 45.0% | |
AACGAGGCGGATAAAAGGAA+GGG | + | chr3.3:88048304-88048323 | None:intergenic | 45.0% | |
ACAAGCACAAACAATGCCGA+AGG | + | chr3.3:88047280-88047299 | None:intergenic | 45.0% | |
ACGATGACAAGCTTGAAGCT+CGG | + | chr3.3:88046178-88046197 | None:intergenic | 45.0% | |
ACTGCTGGACAAGAGAAGTT+TGG | - | chr3.3:88046611-88046630 | MS.gene014808:intron | 45.0% | |
AGCCATTCCTTTACCTTGCT+AGG | - | chr3.3:88047691-88047710 | MS.gene014808:intron | 45.0% | |
AGCTTCAAGCTTGTCATCGT+CGG | - | chr3.3:88046178-88046197 | MS.gene014808:intron | 45.0% | |
CAAGATTCGCTTCTACTGCT+GGG | - | chr3.3:88046586-88046605 | MS.gene014808:intron | 45.0% | |
CAAGCTTCCTAGCAAGGTAA+AGG | + | chr3.3:88047701-88047720 | None:intergenic | 45.0% | |
CATCATCATCGTCATCAGGA+AGG | + | chr3.3:88048512-88048531 | None:intergenic | 45.0% | |
CTTGAAGCTCGGGTAATCAA+CGG | + | chr3.3:88046167-88046186 | None:intergenic | 45.0% | |
TCATCATCGTCATCAGGAAG+GGG | + | chr3.3:88048510-88048529 | None:intergenic | 45.0% | |
TCCTAAACGAGGCGGATAAA+AGG | + | chr3.3:88048309-88048328 | None:intergenic | 45.0% | |
TGTGAAGAACAGGCAAGTGA+AGG | - | chr3.3:88047590-88047609 | MS.gene014808:intron | 45.0% | |
! | AAGTTTGGTGGTCTCAGAGA+TGG | - | chr3.3:88046626-88046645 | MS.gene014808:intron | 45.0% |
! | CAAAGCAGGTTACTTTCCAC+AGG | - | chr3.3:88047613-88047632 | MS.gene014808:intron | 45.0% |
! | TCCTTTTATCCGCCTCGTTT+AGG | - | chr3.3:88048305-88048324 | MS.gene014808:intron | 45.0% |
ACCTTGCTAGGAAGCTTGCA+GGG | - | chr3.3:88047703-88047722 | MS.gene014808:intron | 50.0% | |
CGATGACAAGCTTGAAGCTC+GGG | + | chr3.3:88046177-88046196 | None:intergenic | 50.0% | |
GCAAGATTCGCTTCTACTGC+TGG | - | chr3.3:88046585-88046604 | MS.gene014808:intron | 50.0% | |
GCGGATAAAAGGAAGGGACA+GGG | + | chr3.3:88048298-88048317 | None:intergenic | 50.0% | |
GCTGGACAAGAGAAGTTTGG+TGG | - | chr3.3:88046614-88046633 | MS.gene014808:intron | 50.0% | |
TACCTTGCTAGGAAGCTTGC+AGG | - | chr3.3:88047702-88047721 | MS.gene014808:intron | 50.0% | |
TTCTACTGCTGGGATACTGC+TGG | - | chr3.3:88046596-88046615 | MS.gene014808:intron | 50.0% | |
! | GTCATCAGGAAGGGGTTGAT+TGG | + | chr3.3:88048502-88048521 | None:intergenic | 50.0% |
! | TGGTGTGGAAGTGCATCCAT+TGG | - | chr3.3:88046544-88046563 | MS.gene014808:intron | 50.0% |
AAGCTTGTCATCGTCGGCGA+TGG | - | chr3.3:88046184-88046203 | MS.gene014808:intron | 55.0% | |
ACCCTGCAAGCTTCCTAGCA+AGG | + | chr3.3:88047707-88047726 | None:intergenic | 55.0% | |
ACTTCTGGTGGAGCCAATGC+AGG | + | chr3.3:88047854-88047873 | None:intergenic | 55.0% | |
CAGGCAAGTGAAGGCAAAGC+AGG | - | chr3.3:88047599-88047618 | MS.gene014808:intron | 55.0% | |
CCTGGCACCGTGATCTTTGT+CGG | - | chr3.3:88047414-88047433 | MS.gene014808:intron | 55.0% | |
GGCGGATAAAAGGAAGGGAC+AGG | + | chr3.3:88048299-88048318 | None:intergenic | 55.0% | |
TGCTAGGAAGCTTGCAGGGT+AGG | - | chr3.3:88047707-88047726 | MS.gene014808:intron | 55.0% | |
! | CAAAGATCACGGTGCCAGGT+AGG | + | chr3.3:88047413-88047432 | None:intergenic | 55.0% |
! | GAAGGGGTTGATTGGCAGCT+TGG | + | chr3.3:88048494-88048513 | None:intergenic | 55.0% |
CCGACAAAGATCACGGTGCC+AGG | + | chr3.3:88047417-88047436 | None:intergenic | 60.0% | |
CTTGTCATCGTCGGCGATGG+CGG | - | chr3.3:88046187-88046206 | MS.gene014808:intron | 60.0% | |
! | ATCGTCGGCGATGGCGGCAC+TGG | - | chr3.3:88046193-88046212 | MS.gene014808:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 88046053 | 88048542 | 88046053 | ID=MS.gene014808 |
chr3.3 | mRNA | 88046053 | 88048542 | 88046053 | ID=MS.gene014808.t1;Parent=MS.gene014808 |
chr3.3 | exon | 88048540 | 88048542 | 88048540 | ID=MS.gene014808.t1.exon1;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88048540 | 88048542 | 88048540 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88048381 | 88048450 | 88048381 | ID=MS.gene014808.t1.exon2;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88048381 | 88048450 | 88048381 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88048170 | 88048226 | 88048170 | ID=MS.gene014808.t1.exon3;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88048170 | 88048226 | 88048170 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88047941 | 88048058 | 88047941 | ID=MS.gene014808.t1.exon4;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88047941 | 88048058 | 88047941 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88047160 | 88047249 | 88047160 | ID=MS.gene014808.t1.exon5;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88047160 | 88047249 | 88047160 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88046871 | 88047050 | 88046871 | ID=MS.gene014808.t1.exon6;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88046871 | 88047050 | 88046871 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88046695 | 88046772 | 88046695 | ID=MS.gene014808.t1.exon7;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88046695 | 88046772 | 88046695 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
chr3.3 | exon | 88046053 | 88046122 | 88046053 | ID=MS.gene014808.t1.exon8;Parent=MS.gene014808.t1 |
chr3.3 | CDS | 88046053 | 88046122 | 88046053 | ID=cds.MS.gene014808.t1;Parent=MS.gene014808.t1 |
Gene Sequence |
Protein sequence |