Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014807.t1 | PNX94761.1 | 99.1 | 221 | 2 | 0 | 1 | 221 | 1 | 221 | 2.70E-127 | 464.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014807.t1 | P38546 | 97.3 | 221 | 6 | 0 | 1 | 221 | 1 | 221 | 8.7e-127 | 454.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014807.t1 | A0A2K3MVA4 | 99.1 | 221 | 2 | 0 | 1 | 221 | 1 | 221 | 1.9e-127 | 464.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014807.t1 | MTR_3g107707 | 99.095 | 221 | 2 | 0 | 1 | 221 | 1 | 221 | 7.14e-168 | 461 |
MS.gene014807.t1 | MTR_3g107717 | 99.095 | 221 | 2 | 0 | 1 | 221 | 1 | 221 | 2.58e-167 | 459 |
MS.gene014807.t1 | MTR_3g107713 | 98.190 | 221 | 4 | 0 | 1 | 221 | 1 | 221 | 2.82e-166 | 457 |
MS.gene014807.t1 | MTR_4g113620 | 78.829 | 222 | 36 | 2 | 1 | 221 | 1 | 212 | 4.55e-127 | 357 |
MS.gene014807.t1 | MTR_4g098950 | 30.102 | 196 | 130 | 4 | 14 | 206 | 10 | 201 | 6.62e-27 | 102 |
MS.gene014807.t1 | MTR_8g031680 | 33.951 | 162 | 104 | 3 | 13 | 171 | 6 | 167 | 2.24e-26 | 101 |
MS.gene014807.t1 | MTR_4g088090 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 3.70e-26 | 100 |
MS.gene014807.t1 | MTR_5g013900 | 31.977 | 172 | 106 | 3 | 14 | 178 | 10 | 177 | 4.88e-26 | 100 |
MS.gene014807.t1 | MTR_3g064390 | 33.526 | 173 | 109 | 4 | 15 | 184 | 12 | 181 | 8.33e-26 | 99.8 |
MS.gene014807.t1 | MTR_8g103550 | 34.161 | 161 | 103 | 3 | 15 | 172 | 11 | 171 | 1.18e-25 | 99.4 |
MS.gene014807.t1 | MTR_8g031870 | 32.716 | 162 | 106 | 3 | 13 | 171 | 6 | 167 | 1.43e-25 | 99.0 |
MS.gene014807.t1 | MTR_8g092020 | 30.723 | 166 | 105 | 3 | 14 | 169 | 13 | 178 | 1.81e-25 | 99.0 |
MS.gene014807.t1 | MTR_2g014990 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 1.91e-25 | 99.4 |
MS.gene014807.t1 | MTR_1g097420 | 27.749 | 191 | 125 | 4 | 14 | 191 | 9 | 199 | 2.29e-25 | 98.6 |
MS.gene014807.t1 | MTR_8g089985 | 31.220 | 205 | 128 | 5 | 7 | 199 | 12 | 215 | 4.39e-25 | 98.6 |
MS.gene014807.t1 | MTR_1g029450 | 37.647 | 170 | 98 | 6 | 14 | 177 | 18 | 185 | 6.22e-25 | 97.8 |
MS.gene014807.t1 | MTR_4g064897 | 31.844 | 179 | 114 | 3 | 14 | 189 | 13 | 186 | 7.06e-25 | 97.8 |
MS.gene014807.t1 | MTR_1g115325 | 29.000 | 200 | 126 | 5 | 14 | 209 | 16 | 203 | 9.00e-25 | 97.4 |
MS.gene014807.t1 | MTR_3g087160 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.37e-24 | 96.7 |
MS.gene014807.t1 | MTR_8g093740 | 34.637 | 179 | 110 | 5 | 4 | 177 | 5 | 181 | 1.38e-24 | 96.7 |
MS.gene014807.t1 | MTR_4g079350 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 1.56e-24 | 96.7 |
MS.gene014807.t1 | MTR_1g068740 | 29.381 | 194 | 128 | 5 | 2 | 190 | 3 | 192 | 1.65e-24 | 96.7 |
MS.gene014807.t1 | MTR_3g069510 | 34.731 | 167 | 105 | 4 | 1 | 164 | 1 | 166 | 1.85e-24 | 96.7 |
MS.gene014807.t1 | MTR_6g079550 | 34.483 | 174 | 110 | 4 | 1 | 171 | 1 | 173 | 2.08e-24 | 96.7 |
MS.gene014807.t1 | MTR_5g076590 | 32.948 | 173 | 110 | 4 | 15 | 184 | 12 | 181 | 2.20e-24 | 95.9 |
MS.gene014807.t1 | MTR_3g086980 | 29.469 | 207 | 129 | 5 | 7 | 199 | 11 | 214 | 3.57e-24 | 95.9 |
MS.gene014807.t1 | MTR_1g068730 | 28.866 | 194 | 129 | 5 | 2 | 190 | 3 | 192 | 5.60e-24 | 95.5 |
MS.gene014807.t1 | MTR_2g090865 | 32.903 | 155 | 101 | 2 | 14 | 165 | 12 | 166 | 6.21e-24 | 95.1 |
MS.gene014807.t1 | MTR_2g083860 | 33.117 | 154 | 100 | 2 | 14 | 164 | 14 | 167 | 6.36e-24 | 95.1 |
MS.gene014807.t1 | MTR_8g090215 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.08e-23 | 94.4 |
MS.gene014807.t1 | MTR_2g005510 | 34.416 | 154 | 98 | 2 | 14 | 164 | 16 | 169 | 1.15e-23 | 94.7 |
MS.gene014807.t1 | MTR_7g100020 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 1.76e-23 | 94.0 |
MS.gene014807.t1 | MTR_3g096350 | 34.615 | 182 | 112 | 5 | 1 | 177 | 1 | 180 | 1.79e-23 | 94.0 |
MS.gene014807.t1 | MTR_2g075950 | 32.468 | 154 | 101 | 2 | 14 | 164 | 14 | 167 | 2.05e-23 | 94.0 |
MS.gene014807.t1 | MTR_6g021790 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 3.31e-23 | 93.2 |
MS.gene014807.t1 | MTR_8g036220 | 31.765 | 170 | 112 | 4 | 5 | 171 | 9 | 177 | 4.89e-23 | 93.2 |
MS.gene014807.t1 | MTR_8g031660 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 5.36e-23 | 92.4 |
MS.gene014807.t1 | MTR_8g031830 | 33.333 | 153 | 99 | 3 | 13 | 162 | 6 | 158 | 7.34e-23 | 92.0 |
MS.gene014807.t1 | MTR_2g102060 | 32.919 | 161 | 105 | 3 | 15 | 172 | 12 | 172 | 9.68e-23 | 91.7 |
MS.gene014807.t1 | MTR_7g103070 | 35.088 | 171 | 104 | 5 | 13 | 177 | 16 | 185 | 9.80e-23 | 92.0 |
MS.gene014807.t1 | MTR_7g081700 | 30.108 | 186 | 117 | 4 | 14 | 192 | 9 | 188 | 1.51e-22 | 91.3 |
MS.gene014807.t1 | MTR_4g069850 | 31.214 | 173 | 95 | 6 | 14 | 169 | 9 | 174 | 1.62e-22 | 91.3 |
MS.gene014807.t1 | MTR_8g006970 | 32.447 | 188 | 111 | 6 | 14 | 192 | 23 | 203 | 1.90e-22 | 91.3 |
MS.gene014807.t1 | MTR_4g012940 | 31.792 | 173 | 94 | 6 | 14 | 169 | 9 | 174 | 2.04e-22 | 90.9 |
MS.gene014807.t1 | MTR_7g405790 | 31.056 | 161 | 108 | 3 | 14 | 171 | 16 | 176 | 2.32e-22 | 91.3 |
MS.gene014807.t1 | MTR_2g101890 | 31.677 | 161 | 100 | 3 | 14 | 164 | 11 | 171 | 3.56e-22 | 90.5 |
MS.gene014807.t1 | MTR_2g096550 | 28.834 | 163 | 111 | 2 | 14 | 171 | 16 | 178 | 8.18e-22 | 89.7 |
MS.gene014807.t1 | MTR_4g063160 | 30.488 | 164 | 108 | 5 | 14 | 171 | 16 | 179 | 9.87e-22 | 89.4 |
MS.gene014807.t1 | MTR_8g107070 | 33.121 | 157 | 102 | 2 | 14 | 167 | 15 | 171 | 9.93e-22 | 90.5 |
MS.gene014807.t1 | MTR_8g027220 | 33.136 | 169 | 109 | 4 | 6 | 171 | 20 | 187 | 1.04e-21 | 89.7 |
MS.gene014807.t1 | MTR_1g062760 | 32.749 | 171 | 107 | 6 | 13 | 177 | 14 | 182 | 1.41e-21 | 89.0 |
MS.gene014807.t1 | MTR_8g006970 | 33.129 | 163 | 102 | 4 | 14 | 171 | 9 | 169 | 2.63e-21 | 87.4 |
MS.gene014807.t1 | MTR_1g052475 | 31.098 | 164 | 109 | 3 | 7 | 167 | 10 | 172 | 2.83e-21 | 88.2 |
MS.gene014807.t1 | MTR_2g027660 | 31.646 | 158 | 105 | 2 | 14 | 168 | 7 | 164 | 3.74e-21 | 87.8 |
MS.gene014807.t1 | MTR_0262s0050 | 32.716 | 162 | 105 | 4 | 9 | 167 | 12 | 172 | 3.96e-21 | 87.8 |
MS.gene014807.t1 | MTR_1g078200 | 30.114 | 176 | 117 | 5 | 1 | 171 | 1 | 175 | 1.56e-20 | 86.3 |
MS.gene014807.t1 | MTR_1g097420 | 27.072 | 181 | 119 | 4 | 24 | 191 | 46 | 226 | 2.06e-20 | 86.3 |
MS.gene014807.t1 | MTR_7g051940 | 28.571 | 161 | 112 | 3 | 14 | 171 | 14 | 174 | 5.59e-20 | 84.7 |
MS.gene014807.t1 | MTR_1g094220 | 29.193 | 161 | 110 | 3 | 15 | 171 | 33 | 193 | 6.53e-20 | 84.3 |
MS.gene014807.t1 | MTR_3g064390 | 33.071 | 127 | 84 | 1 | 15 | 140 | 12 | 138 | 9.56e-20 | 82.8 |
MS.gene014807.t1 | MTR_2g005500 | 30.061 | 163 | 107 | 4 | 14 | 171 | 10 | 170 | 1.40e-19 | 83.6 |
MS.gene014807.t1 | MTR_6g039490 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 1.48e-19 | 84.0 |
MS.gene014807.t1 | MTR_7g117910 | 36.434 | 129 | 80 | 2 | 7 | 134 | 15 | 142 | 3.47e-19 | 82.4 |
MS.gene014807.t1 | MTR_1g090717 | 30.857 | 175 | 114 | 5 | 10 | 178 | 13 | 186 | 1.14e-18 | 81.3 |
MS.gene014807.t1 | MTR_1g094220 | 29.012 | 162 | 107 | 4 | 15 | 168 | 33 | 194 | 1.45e-18 | 80.9 |
MS.gene014807.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 1.72e-18 | 80.5 |
MS.gene014807.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 2.79e-18 | 79.0 |
MS.gene014807.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 4.94e-18 | 77.8 |
MS.gene014807.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 8.05e-18 | 79.3 |
MS.gene014807.t1 | MTR_4g099470 | 30.128 | 156 | 100 | 4 | 42 | 192 | 13 | 164 | 1.91e-17 | 77.0 |
MS.gene014807.t1 | MTR_1g068730 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 2.16e-17 | 77.0 |
MS.gene014807.t1 | MTR_1g068740 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 4.21e-17 | 76.6 |
MS.gene014807.t1 | MTR_7g103070 | 36.066 | 122 | 73 | 3 | 61 | 177 | 8 | 129 | 1.79e-14 | 68.6 |
MS.gene014807.t1 | MTR_8g093740 | 35.246 | 122 | 74 | 3 | 61 | 177 | 27 | 148 | 2.35e-14 | 68.9 |
MS.gene014807.t1 | MTR_4g088055 | 27.879 | 165 | 104 | 4 | 14 | 164 | 7 | 170 | 3.02e-14 | 68.9 |
MS.gene014807.t1 | MTR_8g075240 | 28.485 | 165 | 103 | 4 | 14 | 164 | 7 | 170 | 5.67e-14 | 68.2 |
MS.gene014807.t1 | MTR_6g087980 | 33.051 | 118 | 77 | 2 | 14 | 130 | 7 | 123 | 5.80e-14 | 68.6 |
MS.gene014807.t1 | MTR_5g092060 | 26.012 | 173 | 121 | 1 | 10 | 175 | 101 | 273 | 2.18e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014807.t1 | AT5G55190 | 96.833 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 2.55e-163 | 449 |
MS.gene014807.t1 | AT5G20010 | 95.023 | 221 | 11 | 0 | 1 | 221 | 1 | 221 | 2.17e-159 | 439 |
MS.gene014807.t1 | AT5G20020 | 95.023 | 221 | 11 | 0 | 1 | 221 | 1 | 221 | 3.97e-152 | 421 |
MS.gene014807.t1 | AT5G55080 | 70.283 | 212 | 58 | 1 | 1 | 212 | 1 | 207 | 5.95e-108 | 310 |
MS.gene014807.t1 | AT4G39890 | 36.158 | 177 | 103 | 4 | 14 | 186 | 10 | 180 | 4.96e-28 | 105 |
MS.gene014807.t1 | AT1G07410 | 31.551 | 187 | 120 | 3 | 14 | 197 | 13 | 194 | 4.52e-26 | 100 |
MS.gene014807.t1 | AT4G19640 | 33.514 | 185 | 116 | 5 | 15 | 195 | 12 | 193 | 5.41e-26 | 100 |
MS.gene014807.t1 | AT2G44610 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 9.09e-26 | 99.8 |
MS.gene014807.t1 | AT4G18430 | 33.121 | 157 | 102 | 3 | 14 | 167 | 14 | 170 | 2.32e-25 | 99.0 |
MS.gene014807.t1 | AT5G45130 | 33.140 | 172 | 109 | 4 | 15 | 183 | 12 | 180 | 2.63e-25 | 98.6 |
MS.gene014807.t1 | AT5G39620 | 32.335 | 167 | 103 | 3 | 14 | 170 | 6 | 172 | 3.77e-25 | 98.2 |
MS.gene014807.t1 | AT5G59150 | 34.731 | 167 | 105 | 3 | 1 | 164 | 1 | 166 | 7.49e-25 | 97.8 |
MS.gene014807.t1 | AT5G45750 | 35.256 | 156 | 94 | 3 | 14 | 164 | 14 | 167 | 8.86e-25 | 97.4 |
MS.gene014807.t1 | AT1G09630 | 34.132 | 167 | 106 | 3 | 1 | 164 | 1 | 166 | 1.30e-24 | 97.1 |
MS.gene014807.t1 | AT4G18800 | 32.597 | 181 | 110 | 4 | 14 | 189 | 14 | 187 | 1.47e-24 | 97.1 |
MS.gene014807.t1 | AT2G21880 | 30.909 | 165 | 104 | 3 | 14 | 168 | 10 | 174 | 1.89e-24 | 96.7 |
MS.gene014807.t1 | AT1G18200 | 31.336 | 217 | 122 | 7 | 14 | 213 | 14 | 220 | 2.24e-24 | 96.7 |
MS.gene014807.t1 | AT5G60860 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 2.83e-24 | 96.3 |
MS.gene014807.t1 | AT5G65270 | 31.217 | 189 | 121 | 5 | 6 | 191 | 11 | 193 | 3.07e-24 | 96.3 |
MS.gene014807.t1 | AT2G22290 | 32.515 | 163 | 107 | 3 | 14 | 173 | 10 | 172 | 3.11e-24 | 95.9 |
MS.gene014807.t1 | AT4G09720 | 29.240 | 171 | 106 | 3 | 14 | 169 | 9 | 179 | 3.95e-24 | 95.5 |
MS.gene014807.t1 | AT3G15060 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 4.37e-24 | 95.9 |
MS.gene014807.t1 | AT4G39990 | 33.333 | 168 | 104 | 4 | 9 | 171 | 14 | 178 | 4.48e-24 | 95.9 |
MS.gene014807.t1 | AT4G09720 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 5.61e-24 | 95.1 |
MS.gene014807.t1 | AT5G59840 | 29.319 | 191 | 123 | 5 | 14 | 196 | 16 | 202 | 5.92e-24 | 95.5 |
MS.gene014807.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.05e-24 | 95.1 |
MS.gene014807.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.05e-24 | 95.1 |
MS.gene014807.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.05e-24 | 95.1 |
MS.gene014807.t1 | AT1G22740 | 29.630 | 189 | 120 | 6 | 14 | 189 | 9 | 197 | 7.84e-24 | 94.7 |
MS.gene014807.t1 | AT5G10260 | 32.738 | 168 | 110 | 3 | 14 | 178 | 10 | 177 | 1.29e-23 | 94.4 |
MS.gene014807.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene014807.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene014807.t1 | AT5G45130 | 32.353 | 170 | 109 | 4 | 17 | 183 | 22 | 188 | 1.53e-23 | 94.0 |
MS.gene014807.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.26e-23 | 94.0 |
MS.gene014807.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.26e-23 | 94.0 |
MS.gene014807.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.26e-23 | 94.0 |
MS.gene014807.t1 | AT4G09720 | 28.249 | 177 | 106 | 3 | 14 | 169 | 9 | 185 | 2.51e-23 | 93.6 |
MS.gene014807.t1 | AT3G18820 | 32.948 | 173 | 92 | 6 | 14 | 169 | 9 | 174 | 2.82e-23 | 93.2 |
MS.gene014807.t1 | AT4G17530 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 5.69e-23 | 92.4 |
MS.gene014807.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 5.86e-23 | 92.4 |
MS.gene014807.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 5.86e-23 | 92.4 |
MS.gene014807.t1 | AT5G47200 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 6.39e-23 | 92.4 |
MS.gene014807.t1 | AT1G73640 | 32.544 | 169 | 110 | 4 | 6 | 171 | 7 | 174 | 8.02e-23 | 92.8 |
MS.gene014807.t1 | AT5G47960 | 33.951 | 162 | 103 | 4 | 7 | 165 | 10 | 170 | 1.02e-22 | 92.4 |
MS.gene014807.t1 | AT3G12160 | 32.927 | 164 | 106 | 4 | 7 | 167 | 10 | 172 | 1.20e-22 | 92.0 |
MS.gene014807.t1 | AT2G33870 | 30.270 | 185 | 123 | 4 | 14 | 192 | 14 | 198 | 1.91e-22 | 91.3 |
MS.gene014807.t1 | AT1G06400 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 2.14e-22 | 91.3 |
MS.gene014807.t1 | AT1G28550 | 29.730 | 185 | 124 | 4 | 14 | 192 | 14 | 198 | 2.67e-22 | 90.9 |
MS.gene014807.t1 | AT1G02130 | 30.811 | 185 | 118 | 5 | 14 | 192 | 9 | 189 | 3.11e-22 | 90.5 |
MS.gene014807.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.57e-22 | 90.5 |
MS.gene014807.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.57e-22 | 90.5 |
MS.gene014807.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 3.70e-22 | 90.5 |
MS.gene014807.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 3.70e-22 | 90.5 |
MS.gene014807.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 3.70e-22 | 90.5 |
MS.gene014807.t1 | AT1G16920 | 31.818 | 154 | 102 | 2 | 14 | 164 | 14 | 167 | 4.52e-22 | 90.5 |
MS.gene014807.t1 | AT5G64990 | 28.079 | 203 | 124 | 6 | 14 | 203 | 8 | 201 | 5.38e-22 | 90.1 |
MS.gene014807.t1 | AT4G35860 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 7.63e-22 | 89.7 |
MS.gene014807.t1 | AT1G52280 | 31.056 | 161 | 101 | 3 | 14 | 164 | 9 | 169 | 1.00e-21 | 89.4 |
MS.gene014807.t1 | AT1G01200 | 31.953 | 169 | 110 | 4 | 7 | 171 | 23 | 190 | 1.00e-21 | 90.1 |
MS.gene014807.t1 | AT3G16100 | 29.592 | 196 | 122 | 5 | 14 | 198 | 9 | 199 | 1.94e-21 | 88.6 |
MS.gene014807.t1 | AT4G17160 | 30.380 | 158 | 107 | 2 | 14 | 168 | 7 | 164 | 3.11e-21 | 87.8 |
MS.gene014807.t1 | AT2G43130 | 27.461 | 193 | 136 | 4 | 14 | 203 | 13 | 204 | 3.49e-21 | 87.8 |
MS.gene014807.t1 | AT4G17170 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 6.02e-21 | 87.4 |
MS.gene014807.t1 | AT3G07410 | 29.310 | 174 | 120 | 3 | 14 | 184 | 13 | 186 | 1.25e-20 | 86.7 |
MS.gene014807.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 13 | 166 | 1.34e-20 | 86.7 |
MS.gene014807.t1 | AT5G47520 | 30.435 | 161 | 109 | 3 | 14 | 171 | 15 | 175 | 1.42e-20 | 86.7 |
MS.gene014807.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 59 | 212 | 4.05e-20 | 86.3 |
MS.gene014807.t1 | AT4G19640 | 35.938 | 128 | 80 | 2 | 15 | 140 | 12 | 139 | 5.74e-20 | 83.2 |
MS.gene014807.t1 | AT4G19640 | 34.043 | 141 | 90 | 3 | 15 | 152 | 12 | 152 | 6.97e-20 | 84.0 |
MS.gene014807.t1 | AT3G54840 | 29.814 | 161 | 109 | 4 | 15 | 171 | 35 | 195 | 1.23e-19 | 83.6 |
MS.gene014807.t1 | AT5G03520 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 1.39e-19 | 84.0 |
MS.gene014807.t1 | AT2G31680 | 29.193 | 161 | 111 | 3 | 14 | 171 | 13 | 173 | 1.68e-19 | 83.6 |
MS.gene014807.t1 | AT3G11730 | 28.125 | 192 | 133 | 3 | 14 | 202 | 9 | 198 | 1.78e-19 | 83.2 |
MS.gene014807.t1 | AT5G64990 | 27.143 | 210 | 124 | 7 | 14 | 203 | 8 | 208 | 2.50e-19 | 83.2 |
MS.gene014807.t1 | AT3G09900 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 3.49e-19 | 82.8 |
MS.gene014807.t1 | AT3G54840 | 29.375 | 160 | 109 | 4 | 16 | 171 | 2 | 161 | 3.52e-19 | 81.6 |
MS.gene014807.t1 | AT3G54840 | 30.519 | 154 | 103 | 4 | 15 | 164 | 35 | 188 | 1.84e-18 | 80.1 |
MS.gene014807.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.79e-17 | 77.8 |
MS.gene014807.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.79e-17 | 77.8 |
MS.gene014807.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.79e-17 | 77.8 |
MS.gene014807.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.76e-17 | 77.0 |
MS.gene014807.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.76e-17 | 77.0 |
MS.gene014807.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.63e-17 | 75.9 |
MS.gene014807.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.63e-17 | 75.9 |
MS.gene014807.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.84e-16 | 74.3 |
MS.gene014807.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.84e-16 | 74.3 |
MS.gene014807.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.84e-16 | 74.3 |
MS.gene014807.t1 | AT2G21880 | 29.091 | 165 | 99 | 5 | 14 | 168 | 10 | 166 | 3.70e-16 | 74.3 |
MS.gene014807.t1 | AT4G35860 | 31.858 | 113 | 74 | 2 | 62 | 171 | 9 | 121 | 6.20e-15 | 70.1 |
MS.gene014807.t1 | AT5G03520 | 29.323 | 133 | 86 | 4 | 61 | 189 | 53 | 181 | 6.86e-15 | 70.9 |
MS.gene014807.t1 | AT5G59150 | 33.962 | 106 | 67 | 2 | 62 | 164 | 10 | 115 | 5.10e-14 | 67.8 |
MS.gene014807.t1 | AT4G35950 | 29.697 | 165 | 101 | 4 | 14 | 164 | 7 | 170 | 6.06e-14 | 68.2 |
MS.gene014807.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 8.23e-14 | 67.8 |
MS.gene014807.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 8.23e-14 | 67.8 |
MS.gene014807.t1 | AT3G51300 | 32.203 | 118 | 78 | 2 | 15 | 131 | 8 | 124 | 9.88e-14 | 67.8 |
MS.gene014807.t1 | AT4G28950 | 28.834 | 163 | 103 | 4 | 14 | 164 | 7 | 168 | 1.43e-13 | 67.4 |
MS.gene014807.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.80e-11 | 58.5 |
MS.gene014807.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.80e-11 | 58.5 |
Find 55 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAAATCAATTTGAACTTC+TGG | 0.258290 | 3.3:+88056997 | None:intergenic |
GATTCTACAAAGTGCAAGTT+AGG | 0.300639 | 3.3:+88057036 | None:intergenic |
CCTGGCACCGTGACCTTTGC+CGG | 0.305468 | 3.3:-88057458 | MS.gene014807:intron |
ACCAGAAGTTCAAATTGATT+TGG | 0.314372 | 3.3:-88056998 | MS.gene014807:CDS |
TAATCAACGGTTTGCTGATT+GGG | 0.345641 | 3.3:+88058982 | None:intergenic |
TTCGTGAAGAGGCATCTTAC+TGG | 0.354401 | 3.3:-88058783 | MS.gene014807:CDS |
GCAAGATTCGCTTCTACTGC+TGG | 0.380027 | 3.3:-88058573 | MS.gene014807:CDS |
CAGACAAGTAAAGGCAAAAC+AGG | 0.391947 | 3.3:-88057264 | MS.gene014807:CDS |
TTGTTGCCGCAAAGGACAAT+TGG | 0.405276 | 3.3:+88057302 | None:intergenic |
CCGGCAAAGGTCACGGTGCC+AGG | 0.413609 | 3.3:+88057458 | None:intergenic |
GTCTTAATTTGCAGTATCCA+TGG | 0.429396 | 3.3:-88057540 | MS.gene014807:intron |
GTAATCAACGGTTTGCTGAT+TGG | 0.432131 | 3.3:+88058981 | None:intergenic |
AACATCCCAATTGTCCTTTG+CGG | 0.439749 | 3.3:-88057308 | MS.gene014807:CDS |
TACCTCGCTAGGAAGCTTGC+AGG | 0.440796 | 3.3:-88057161 | MS.gene014807:CDS |
CTTTGTAGAATCTCCTGCAT+TGG | 0.466850 | 3.3:-88057025 | MS.gene014807:CDS |
CTTGTCATCGTCGGCGATGG+TGG | 0.469288 | 3.3:-88058946 | MS.gene014807:CDS |
GGATTGTAAACAGCTACAAT+TGG | 0.470488 | 3.3:-88058634 | MS.gene014807:intron |
ACTGCTGGACAAGAGAAGTT+TGG | 0.471338 | 3.3:-88058547 | MS.gene014807:CDS |
CAAGCTTCCTAGCGAGGTAA+AGG | 0.485893 | 3.3:+88057165 | None:intergenic |
GACATTCTTGTAAGTCAGTC+GGG | 0.486447 | 3.3:+88057485 | None:intergenic |
TGTTGCCGCAAAGGACAATT+GGG | 0.497912 | 3.3:+88057303 | None:intergenic |
AATGCATCGTCATCATCATC+AGG | 0.506735 | 3.3:+88056523 | None:intergenic |
CGATGACAAGCTTGAAGCTA+GGG | 0.522806 | 3.3:+88058959 | None:intergenic |
CATCAACCTTGTTGCCGCAA+AGG | 0.523241 | 3.3:+88057294 | None:intergenic |
AAAGGTCACGGTGCCAGGTA+GGG | 0.524010 | 3.3:+88057463 | None:intergenic |
AAGCTTGTCATCGTCGGCGA+TGG | 0.528569 | 3.3:-88058949 | MS.gene014807:CDS |
CAAAGGTCACGGTGCCAGGT+AGG | 0.529726 | 3.3:+88057462 | None:intergenic |
ACTTCTGGTGGAGCCAATGC+AGG | 0.537856 | 3.3:+88057012 | None:intergenic |
ACGATGACAAGCTTGAAGCT+AGG | 0.540102 | 3.3:+88058958 | None:intergenic |
ATCGTCGGCGATGGTGGCAC+AGG | 0.542170 | 3.3:-88058940 | MS.gene014807:intron |
AAGTTTGGTGGTCTCAGAGA+TGG | 0.543632 | 3.3:-88058532 | MS.gene014807:CDS |
TTCTACTGCTGGGATACTGC+TGG | 0.543775 | 3.3:-88058562 | MS.gene014807:CDS |
TTATAATCGCACACTGCCCA+TGG | 0.550208 | 3.3:+88057523 | None:intergenic |
GGACATTCTTGTAAGTCAGT+CGG | 0.557327 | 3.3:+88057484 | None:intergenic |
AGCCATTCCTTTACCTCGCT+AGG | 0.562695 | 3.3:-88057172 | MS.gene014807:CDS |
AAATCAATTTGAACTTCTGG+TGG | 0.563330 | 3.3:+88057000 | None:intergenic |
CAAGATTCGCTTCTACTGCT+GGG | 0.564996 | 3.3:-88058572 | MS.gene014807:CDS |
TCTTAATTTGCAGTATCCAT+GGG | 0.579772 | 3.3:-88057539 | MS.gene014807:intron |
AGCTTCAAGCTTGTCATCGT+CGG | 0.588431 | 3.3:-88058955 | MS.gene014807:CDS |
TTGGATTTCTTCACAAACTG+CGG | 0.590990 | 3.3:-88058595 | MS.gene014807:CDS |
TCGTCATCATCATCAGGAAG+TGG | 0.592385 | 3.3:+88056529 | None:intergenic |
CTTACAAGAATGTCCCTACC+TGG | 0.594434 | 3.3:-88057476 | MS.gene014807:CDS |
ACTTGATTACATACCGGCAA+AGG | 0.595496 | 3.3:+88057445 | None:intergenic |
AATTGTCCTTTGCGGCAACA+AGG | 0.598358 | 3.3:-88057300 | MS.gene014807:CDS |
ATTCTACAAAGTGCAAGTTA+GGG | 0.598867 | 3.3:+88057037 | None:intergenic |
ACCTCGCTAGGAAGCTTGCA+GGG | 0.599331 | 3.3:-88057160 | MS.gene014807:intron |
CATCATCATCAGGAAGTGGT+TGG | 0.602857 | 3.3:+88056533 | None:intergenic |
TGGTGTGGAAGTGCATCCAT+TGG | 0.604734 | 3.3:-88058614 | MS.gene014807:CDS |
CAGTTTGTGAAGAAATCCAA+TGG | 0.610326 | 3.3:+88058598 | None:intergenic |
GCTGGACAAGAGAAGTTTGG+TGG | 0.616663 | 3.3:-88058544 | MS.gene014807:CDS |
TTACATACCGGCAAAGGTCA+CGG | 0.618692 | 3.3:+88057451 | None:intergenic |
TTCCTAGCGAGGTAAAGGAA+TGG | 0.639000 | 3.3:+88057170 | None:intergenic |
CTTGAAGCTAGGGTAATCAA+CGG | 0.640018 | 3.3:+88058969 | None:intergenic |
GTAAACAGCTACAATTGGTG+TGG | 0.644898 | 3.3:-88058629 | MS.gene014807:intron |
ACCCTGCAAGCTTCCTAGCG+AGG | 0.654259 | 3.3:+88057159 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATACAGAATTAAATT+GGG | - | chr3.3:88058823-88058842 | MS.gene014807:intron | 10.0% |
!! | CAAAAAAAAAAAAAAAAAAC+AGG | + | chr3.3:88058238-88058257 | None:intergenic | 10.0% |
!! | TAAAAAATACAGAATTAAAT+TGG | - | chr3.3:88058822-88058841 | MS.gene014807:intron | 10.0% |
!!! | CTGTTTTTTTTTTTTTTTTT+TGG | - | chr3.3:88058236-88058255 | MS.gene014807:intron | 10.0% |
!! | ATATAACCCTAAATTAAAAA+CGG | + | chr3.3:88056865-88056884 | None:intergenic | 15.0% |
!! | TAACAACAAAACAATTAAAA+AGG | + | chr3.3:88058181-88058200 | None:intergenic | 15.0% |
!!! | TTTTGAATTTCTTATGTATT+TGG | - | chr3.3:88058995-88059014 | MS.gene014807:intron | 15.0% |
!! | AAACAATTAAAAAGGTTTGA+AGG | + | chr3.3:88058173-88058192 | None:intergenic | 20.0% |
!! | AATCCATTTAGTAATTGAAT+TGG | - | chr3.3:88058966-88058985 | MS.gene014807:CDS | 20.0% |
!! | ATCATACAAATAAATGGAAA+GGG | + | chr3.3:88058908-88058927 | None:intergenic | 20.0% |
!! | ATGTTAAACACAAATAGAAA+GGG | + | chr3.3:88058028-88058047 | None:intergenic | 20.0% |
!! | ATTCCAATTCAATTACTAAA+TGG | + | chr3.3:88058972-88058991 | None:intergenic | 20.0% |
!! | ATTGTAGGATAAAGAATAAA+AGG | + | chr3.3:88058654-88058673 | None:intergenic | 20.0% |
!! | ATTTATTTGTATGATCTCTT+AGG | - | chr3.3:88058913-88058932 | MS.gene014807:intron | 20.0% |
!! | CACAATACTGATAAATTTAA+GGG | + | chr3.3:88057335-88057354 | None:intergenic | 20.0% |
!! | CTTAAATTTATCAGTATTGT+GGG | - | chr3.3:88057334-88057353 | MS.gene014807:intron | 20.0% |
!! | GATAAAAGAACTAAAATTAC+AGG | + | chr3.3:88057756-88057775 | None:intergenic | 20.0% |
!! | TAAGAGATCATACAAATAAA+TGG | + | chr3.3:88058914-88058933 | None:intergenic | 20.0% |
!! | TATGTTAAACACAAATAGAA+AGG | + | chr3.3:88058029-88058048 | None:intergenic | 20.0% |
!!! | CAATTACTAAATGGATTATA+TGG | + | chr3.3:88058963-88058982 | None:intergenic | 20.0% |
!!! | GATTAATTAGTTGATTTGAT+TGG | - | chr3.3:88056937-88056956 | MS.gene014807:intron | 20.0% |
!!! | TAAGTTCCGTTTTTAATTTA+GGG | - | chr3.3:88056856-88056875 | MS.gene014807:intron | 20.0% |
!!! | TTTAGTTCTTTTATCATATG+TGG | - | chr3.3:88057761-88057780 | MS.gene014807:intron | 20.0% |
! | ATTGAAAAAGAAAAAGCGAT+TGG | + | chr3.3:88056680-88056699 | None:intergenic | 25.0% |
! | CAAGCTATCATATATTAAAC+AGG | + | chr3.3:88057146-88057165 | None:intergenic | 25.0% |
! | CCACAATACTGATAAATTTA+AGG | + | chr3.3:88057336-88057355 | None:intergenic | 25.0% |
! | CCTTAAATTTATCAGTATTG+TGG | - | chr3.3:88057333-88057352 | MS.gene014807:intron | 25.0% |
! | GATCATACAAATAAATGGAA+AGG | + | chr3.3:88058909-88058928 | None:intergenic | 25.0% |
! | TAAATAGATAAGGAAAGGAA+TGG | + | chr3.3:88058883-88058902 | None:intergenic | 25.0% |
! | TCTATTTGTGTTTAACATAC+TGG | - | chr3.3:88058030-88058049 | MS.gene014807:intron | 25.0% |
! | TGAATAAGATCATTCATGTT+AGG | + | chr3.3:88057494-88057513 | None:intergenic | 25.0% |
!! | ATGTTCTTTTTGTAGTCTTT+AGG | - | chr3.3:88057855-88057874 | MS.gene014807:intron | 25.0% |
!!! | ACTGCAAATTCTTTTTTCTA+TGG | + | chr3.3:88058361-88058380 | None:intergenic | 25.0% |
!!! | CAAATTCTTTTTTCTATGGA+AGG | + | chr3.3:88058357-88058376 | None:intergenic | 25.0% |
!!! | GTAAGTTCCGTTTTTAATTT+AGG | - | chr3.3:88056855-88056874 | MS.gene014807:intron | 25.0% |
!!! | TGATTTTTTCTTTGTTCTCT+AGG | - | chr3.3:88056582-88056601 | MS.gene014807:intron | 25.0% |
AAATCAATTTGAACTTCTGG+TGG | + | chr3.3:88058595-88058614 | None:intergenic | 30.0% | |
ACCAGAAGTTCAAATTGATT+TGG | - | chr3.3:88058594-88058613 | MS.gene014807:CDS | 30.0% | |
ATCCTACAATCATTCATCAT+TGG | - | chr3.3:88058664-88058683 | MS.gene014807:intron | 30.0% | |
ATGGATATGAGGGTTATAAA+TGG | - | chr3.3:88058770-88058789 | MS.gene014807:CDS | 30.0% | |
ATTCTACAAAGTGCAAGTTA+GGG | + | chr3.3:88058558-88058577 | None:intergenic | 30.0% | |
ATTGTAGCATTGCAAAATAG+TGG | - | chr3.3:88058702-88058721 | MS.gene014807:intron | 30.0% | |
GGAAAGGGAATAAATAGATA+AGG | + | chr3.3:88058893-88058912 | None:intergenic | 30.0% | |
GGGAATAAATAGATAAGGAA+AGG | + | chr3.3:88058888-88058907 | None:intergenic | 30.0% | |
GTTGCATGTAAAATAAGTGT+AGG | - | chr3.3:88057281-88057300 | MS.gene014807:CDS | 30.0% | |
TCTTGAATCAAATTGTTCCT+TGG | - | chr3.3:88057787-88057806 | MS.gene014807:intron | 30.0% | |
TGTGAAAAACAGACAAGTAA+AGG | - | chr3.3:88058319-88058338 | MS.gene014807:intron | 30.0% | |
! | AACATTGTATGATGATTTGC+AGG | - | chr3.3:88056776-88056795 | MS.gene014807:intron | 30.0% |
! | CTGCTTCATATACATGTTTT+AGG | - | chr3.3:88057575-88057594 | MS.gene014807:intron | 30.0% |
! | TCTTTTTGTAGTCTTTAGGT+GGG | - | chr3.3:88057859-88057878 | MS.gene014807:intron | 30.0% |
! | TTCTTTTTGTAGTCTTTAGG+TGG | - | chr3.3:88057858-88057877 | MS.gene014807:intron | 30.0% |
!! | TCTTAATTTGCAGTATCCAT+GGG | - | chr3.3:88058053-88058072 | MS.gene014807:intron | 30.0% |
!!! | TACTGTGCTCTCAAATTTTT+TGG | - | chr3.3:88057117-88057136 | MS.gene014807:intron | 30.0% |
!!! | TTTTGGCTCAATTGTTTTCA+GGG | - | chr3.3:88058253-88058272 | MS.gene014807:intron | 30.0% |
!!! | TTTTTGGCTCAATTGTTTTC+AGG | - | chr3.3:88058252-88058271 | MS.gene014807:intron | 30.0% |
AGGGTTATAAATGGTAAGAG+AGG | - | chr3.3:88058779-88058798 | MS.gene014807:CDS | 35.0% | |
CAGTTTGTGAAGAAATCCAA+TGG | + | chr3.3:88056997-88057016 | None:intergenic | 35.0% | |
GAAAAACAACATTCGTGAAG+AGG | - | chr3.3:88056798-88056817 | MS.gene014807:intron | 35.0% | |
GATTCTACAAAGTGCAAGTT+AGG | + | chr3.3:88058559-88058578 | None:intergenic | 35.0% | |
GCCAAATCAATTTGAACTTC+TGG | + | chr3.3:88058598-88058617 | None:intergenic | 35.0% | |
GGATTGTAAACAGCTACAAT+TGG | - | chr3.3:88056958-88056977 | MS.gene014807:intron | 35.0% | |
GGGTTATAAATGGTAAGAGA+GGG | - | chr3.3:88058780-88058799 | MS.gene014807:CDS | 35.0% | |
GTACATTGAATGAAATGACG+AGG | + | chr3.3:88057100-88057119 | None:intergenic | 35.0% | |
TATAACCCTCATATCCATGA+TGG | + | chr3.3:88058768-88058787 | None:intergenic | 35.0% | |
TCAGTAGAACAGTTTGTGTA+AGG | - | chr3.3:88057947-88057966 | MS.gene014807:intron | 35.0% | |
TGAAGGACTTGATTACATAC+CGG | + | chr3.3:88058156-88058175 | None:intergenic | 35.0% | |
TGCCAATGATGAATGATTGT+AGG | + | chr3.3:88058669-88058688 | None:intergenic | 35.0% | |
TTGGATTTCTTCACAAACTG+CGG | - | chr3.3:88056997-88057016 | MS.gene014807:CDS | 35.0% | |
! | AACTTGAGAGCACAATAAAC+AGG | + | chr3.3:88057424-88057443 | None:intergenic | 35.0% |
! | CTTTTTGTAGTCTTTAGGTG+GGG | - | chr3.3:88057860-88057879 | MS.gene014807:intron | 35.0% |
! | TAGGATCTCGCTTATTGATT+TGG | - | chr3.3:88056748-88056767 | MS.gene014807:intron | 35.0% |
! | TGTTCTTGTCTGCATGTTTT+TGG | - | chr3.3:88057704-88057723 | MS.gene014807:intron | 35.0% |
!! | GGTTGTGAGACTTTGATTTT+AGG | + | chr3.3:88058747-88058766 | None:intergenic | 35.0% |
!! | GTCTTAATTTGCAGTATCCA+TGG | - | chr3.3:88058052-88058071 | MS.gene014807:intron | 35.0% |
!! | TAATCAACGGTTTGCTGATT+GGG | + | chr3.3:88056613-88056632 | None:intergenic | 35.0% |
!! | TTTCTAGTTTCTACACAGTC+AGG | - | chr3.3:88058466-88058485 | MS.gene014807:intron | 35.0% |
AAAGGAATGGACACTAGACA+GGG | + | chr3.3:88058870-88058889 | None:intergenic | 40.0% | |
AACATCCCAATTGTCCTTTG+CGG | - | chr3.3:88058284-88058303 | MS.gene014807:intron | 40.0% | |
AATGCATCGTCATCATCATC+AGG | + | chr3.3:88059072-88059091 | None:intergenic | 40.0% | |
ACTCTGTTCTGATTAATCCC+AGG | + | chr3.3:88057822-88057841 | None:intergenic | 40.0% | |
ACTTGATTACATACCGGCAA+AGG | + | chr3.3:88058150-88058169 | None:intergenic | 40.0% | |
AGACACACACACAAAACTGA+AGG | + | chr3.3:88057997-88058016 | None:intergenic | 40.0% | |
CACAACCATCATGGATATGA+GGG | - | chr3.3:88058760-88058779 | MS.gene014807:CDS | 40.0% | |
CAGACAAGTAAAGGCAAAAC+AGG | - | chr3.3:88058328-88058347 | MS.gene014807:intron | 40.0% | |
CTCTGTTCTGATTAATCCCA+GGG | + | chr3.3:88057821-88057840 | None:intergenic | 40.0% | |
CTTGAAGCTAGGGTAATCAA+CGG | + | chr3.3:88056626-88056645 | None:intergenic | 40.0% | |
CTTTGTAGAATCTCCTGCAT+TGG | - | chr3.3:88058567-88058586 | MS.gene014807:CDS | 40.0% | |
GACACACACACAAAACTGAA+GGG | + | chr3.3:88057996-88058015 | None:intergenic | 40.0% | |
GACATTCTTGTAAGTCAGTC+GGG | + | chr3.3:88058110-88058129 | None:intergenic | 40.0% | |
GGACATTCTTGTAAGTCAGT+CGG | + | chr3.3:88058111-88058130 | None:intergenic | 40.0% | |
GTAAACAGCTACAATTGGTG+TGG | - | chr3.3:88056963-88056982 | MS.gene014807:intron | 40.0% | |
TCAAAGTCTCACAACCATCA+TGG | - | chr3.3:88058751-88058770 | MS.gene014807:intron | 40.0% | |
TCACAACCATCATGGATATG+AGG | - | chr3.3:88058759-88058778 | MS.gene014807:intron | 40.0% | |
!! | ACATAAAACACCGATTCGCT+AGG | - | chr3.3:88056729-88056748 | MS.gene014807:intron | 40.0% |
!! | AGGTTGTGTAGCTGTTTTCT+AGG | - | chr3.3:88057301-88057320 | MS.gene014807:CDS | 40.0% |
!! | GTAATCAACGGTTTGCTGAT+TGG | + | chr3.3:88056614-88056633 | None:intergenic | 40.0% |
!! | TACATGTTTTAGGTCGTCAG+TGG | - | chr3.3:88057585-88057604 | MS.gene014807:intron | 40.0% |
!!! | TGCATGTTTTTGGTTGTCAG+CGG | - | chr3.3:88057714-88057733 | MS.gene014807:intron | 40.0% |
AATTGTCCTTTGCGGCAACA+AGG | - | chr3.3:88058292-88058311 | MS.gene014807:intron | 45.0% | |
ACGATGACAAGCTTGAAGCT+AGG | + | chr3.3:88056637-88056656 | None:intergenic | 45.0% | |
ACTGCTGGACAAGAGAAGTT+TGG | - | chr3.3:88057045-88057064 | MS.gene014807:intron | 45.0% | |
AGCTTCAAGCTTGTCATCGT+CGG | - | chr3.3:88056637-88056656 | MS.gene014807:intron | 45.0% | |
CAAGATTCGCTTCTACTGCT+GGG | - | chr3.3:88057020-88057039 | MS.gene014807:CDS | 45.0% | |
CATCATCATCAGGAAGTGGT+TGG | + | chr3.3:88059062-88059081 | None:intergenic | 45.0% | |
CGATGACAAGCTTGAAGCTA+GGG | + | chr3.3:88056636-88056655 | None:intergenic | 45.0% | |
CTTACAAGAATGTCCCTACC+TGG | - | chr3.3:88058116-88058135 | MS.gene014807:intron | 45.0% | |
GAAAGGAATGGACACTAGAC+AGG | + | chr3.3:88058871-88058890 | None:intergenic | 45.0% | |
TAAGCGAGATCCTAGCGAAT+CGG | + | chr3.3:88056742-88056761 | None:intergenic | 45.0% | |
TAGGTGGGGCTGAGTTATTT+AGG | - | chr3.3:88057874-88057893 | MS.gene014807:intron | 45.0% | |
TCGTCATCATCATCAGGAAG+TGG | + | chr3.3:88059066-88059085 | None:intergenic | 45.0% | |
TGACATGCAAAGCCTAGAGA+CGG | + | chr3.3:88056537-88056556 | None:intergenic | 45.0% | |
TGTTGCCGCAAAGGACAATT+GGG | + | chr3.3:88058292-88058311 | None:intergenic | 45.0% | |
TTACATACCGGCAAAGGTCA+CGG | + | chr3.3:88058144-88058163 | None:intergenic | 45.0% | |
TTATAATCGCACACTGCCCA+TGG | + | chr3.3:88058072-88058091 | None:intergenic | 45.0% | |
TTCCTAGCGAGGTAAAGGAA+TGG | + | chr3.3:88058425-88058444 | None:intergenic | 45.0% | |
TTGTTGCCGCAAAGGACAAT+TGG | + | chr3.3:88058293-88058312 | None:intergenic | 45.0% | |
! | AAGTTTGGTGGTCTCAGAGA+TGG | - | chr3.3:88057060-88057079 | MS.gene014807:intron | 45.0% |
! | TGATTAATCCCAGGGCATCA+AGG | + | chr3.3:88057813-88057832 | None:intergenic | 45.0% |
!! | TTCGTGAAGAGGCATCTTAC+TGG | - | chr3.3:88056809-88056828 | MS.gene014807:intron | 45.0% |
AATGGTAAGAGAGGGTCGTG+CGG | - | chr3.3:88058788-88058807 | MS.gene014807:CDS | 50.0% | |
ACATGCAAAGCCTAGAGACG+GGG | + | chr3.3:88056535-88056554 | None:intergenic | 50.0% | |
AGCCATTCCTTTACCTCGCT+AGG | - | chr3.3:88058420-88058439 | MS.gene014807:intron | 50.0% | |
CAAGCTTCCTAGCGAGGTAA+AGG | + | chr3.3:88058430-88058449 | None:intergenic | 50.0% | |
CATCAACCTTGTTGCCGCAA+AGG | + | chr3.3:88058301-88058320 | None:intergenic | 50.0% | |
GACATGCAAAGCCTAGAGAC+GGG | + | chr3.3:88056536-88056555 | None:intergenic | 50.0% | |
GCAAGATTCGCTTCTACTGC+TGG | - | chr3.3:88057019-88057038 | MS.gene014807:CDS | 50.0% | |
GCTGGACAAGAGAAGTTTGG+TGG | - | chr3.3:88057048-88057067 | MS.gene014807:intron | 50.0% | |
TTCTACTGCTGGGATACTGC+TGG | - | chr3.3:88057030-88057049 | MS.gene014807:CDS | 50.0% | |
! | CGTTTTTCTTCCCCGTCTCT+AGG | - | chr3.3:88056522-88056541 | MS.gene014807:CDS | 50.0% |
! | TGGTGTGGAAGTGCATCCAT+TGG | - | chr3.3:88056978-88056997 | MS.gene014807:intron | 50.0% |
AAGCTTGTCATCGTCGGCGA+TGG | - | chr3.3:88056643-88056662 | MS.gene014807:intron | 55.0% | |
ACCTCGCTAGGAAGCTTGCA+GGG | - | chr3.3:88058432-88058451 | MS.gene014807:intron | 55.0% | |
ACTGTGCATCTGCACTGCAC+GGG | - | chr3.3:88057222-88057241 | MS.gene014807:CDS | 55.0% | |
ACTTCTGGTGGAGCCAATGC+AGG | + | chr3.3:88058583-88058602 | None:intergenic | 55.0% | |
CACTGTGCATCTGCACTGCA+CGG | - | chr3.3:88057221-88057240 | MS.gene014807:CDS | 55.0% | |
TACCTCGCTAGGAAGCTTGC+AGG | - | chr3.3:88058431-88058450 | MS.gene014807:intron | 55.0% | |
! | AAAGGTCACGGTGCCAGGTA+GGG | + | chr3.3:88058132-88058151 | None:intergenic | 55.0% |
!! | TTCCTTGGCCTTGATGCCCT+GGG | - | chr3.3:88057802-88057821 | MS.gene014807:intron | 55.0% |
ACCCTGCAAGCTTCCTAGCG+AGG | + | chr3.3:88058436-88058455 | None:intergenic | 60.0% | |
CGCTAGGAAGCTTGCAGGGT+AGG | - | chr3.3:88058436-88058455 | MS.gene014807:intron | 60.0% | |
CTTGTCATCGTCGGCGATGG+TGG | - | chr3.3:88056646-88056665 | MS.gene014807:intron | 60.0% | |
GTAAGAGAGGGTCGTGCGGA+TGG | - | chr3.3:88058792-88058811 | MS.gene014807:CDS | 60.0% | |
! | ATCCCAGGGCATCAAGGCCA+AGG | + | chr3.3:88057807-88057826 | None:intergenic | 60.0% |
! | CAAAGGTCACGGTGCCAGGT+AGG | + | chr3.3:88058133-88058152 | None:intergenic | 60.0% |
!! | GTTCCTTGGCCTTGATGCCC+TGG | - | chr3.3:88057801-88057820 | MS.gene014807:intron | 60.0% |
CCTGGCACCGTGACCTTTGC+CGG | - | chr3.3:88058134-88058153 | MS.gene014807:intron | 65.0% | |
! | ATCGTCGGCGATGGTGGCAC+AGG | - | chr3.3:88056652-88056671 | MS.gene014807:intron | 65.0% |
CCGGCAAAGGTCACGGTGCC+AGG | + | chr3.3:88058137-88058156 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 88056516 | 88059098 | 88056516 | ID=MS.gene014807 |
chr3.3 | mRNA | 88056516 | 88059098 | 88056516 | ID=MS.gene014807.t1;Parent=MS.gene014807 |
chr3.3 | exon | 88059096 | 88059098 | 88059096 | ID=MS.gene014807.t1.exon1;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88059096 | 88059098 | 88059096 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88058941 | 88059010 | 88058941 | ID=MS.gene014807.t1.exon2;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88058941 | 88059010 | 88058941 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88058760 | 88058816 | 88058760 | ID=MS.gene014807.t1.exon3;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88058760 | 88058816 | 88058760 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88058526 | 88058643 | 88058526 | ID=MS.gene014807.t1.exon4;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88058526 | 88058643 | 88058526 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88057459 | 88057548 | 88057459 | ID=MS.gene014807.t1.exon5;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88057459 | 88057548 | 88057459 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88057161 | 88057340 | 88057161 | ID=MS.gene014807.t1.exon6;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88057161 | 88057340 | 88057161 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88056985 | 88057062 | 88056985 | ID=MS.gene014807.t1.exon7;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88056985 | 88057062 | 88056985 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
chr3.3 | exon | 88056516 | 88056585 | 88056516 | ID=MS.gene014807.t1.exon8;Parent=MS.gene014807.t1 |
chr3.3 | CDS | 88056516 | 88056585 | 88056516 | ID=cds.MS.gene014807.t1;Parent=MS.gene014807.t1 |
Gene Sequence |
Protein sequence |