Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32605.t1 | XP_013461890.1 | 99.5 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 2.70E-127 | 464.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32605.t1 | P38548 | 97.7 | 221 | 5 | 0 | 1 | 221 | 1 | 221 | 1.6e-128 | 459.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32605.t1 | I3S2M3 | 99.5 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 1.9e-127 | 464.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32605.t1 | MTR_3g107707 | 99.548 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 5.31e-168 | 461 |
MS.gene32605.t1 | MTR_3g107717 | 98.643 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 7.64e-167 | 458 |
MS.gene32605.t1 | MTR_3g107713 | 98.643 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 2.01e-166 | 457 |
MS.gene32605.t1 | MTR_4g113620 | 78.829 | 222 | 36 | 2 | 1 | 221 | 1 | 212 | 1.57e-127 | 358 |
MS.gene32605.t1 | MTR_4g098950 | 30.052 | 193 | 128 | 4 | 14 | 203 | 10 | 198 | 4.86e-27 | 103 |
MS.gene32605.t1 | MTR_8g031680 | 33.951 | 162 | 104 | 3 | 13 | 171 | 6 | 167 | 1.87e-26 | 101 |
MS.gene32605.t1 | MTR_4g088090 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 3.82e-26 | 100 |
MS.gene32605.t1 | MTR_5g013900 | 31.977 | 172 | 106 | 3 | 14 | 178 | 10 | 177 | 4.78e-26 | 100 |
MS.gene32605.t1 | MTR_3g064390 | 33.526 | 173 | 109 | 4 | 15 | 184 | 12 | 181 | 9.27e-26 | 99.8 |
MS.gene32605.t1 | MTR_8g103550 | 34.161 | 161 | 103 | 3 | 15 | 172 | 11 | 171 | 1.04e-25 | 99.4 |
MS.gene32605.t1 | MTR_8g031870 | 32.716 | 162 | 106 | 3 | 13 | 171 | 6 | 167 | 1.30e-25 | 99.0 |
MS.gene32605.t1 | MTR_2g014990 | 30.526 | 190 | 126 | 4 | 14 | 197 | 14 | 203 | 1.70e-25 | 99.4 |
MS.gene32605.t1 | MTR_8g092020 | 30.723 | 166 | 105 | 3 | 14 | 169 | 13 | 178 | 1.81e-25 | 99.0 |
MS.gene32605.t1 | MTR_1g097420 | 27.749 | 191 | 125 | 4 | 14 | 191 | 9 | 199 | 2.09e-25 | 99.0 |
MS.gene32605.t1 | MTR_1g029450 | 37.647 | 170 | 98 | 6 | 14 | 177 | 18 | 185 | 6.22e-25 | 97.8 |
MS.gene32605.t1 | MTR_4g064897 | 31.844 | 179 | 114 | 3 | 14 | 189 | 13 | 186 | 7.29e-25 | 97.8 |
MS.gene32605.t1 | MTR_8g089985 | 31.915 | 188 | 119 | 5 | 7 | 191 | 12 | 193 | 1.13e-24 | 97.4 |
MS.gene32605.t1 | MTR_8g093740 | 34.637 | 179 | 110 | 5 | 4 | 177 | 5 | 181 | 1.33e-24 | 96.7 |
MS.gene32605.t1 | MTR_3g087160 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.34e-24 | 96.7 |
MS.gene32605.t1 | MTR_4g079350 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 1.60e-24 | 96.7 |
MS.gene32605.t1 | MTR_3g069510 | 34.731 | 167 | 105 | 4 | 1 | 164 | 1 | 166 | 1.72e-24 | 96.7 |
MS.gene32605.t1 | MTR_1g068740 | 29.381 | 194 | 128 | 5 | 2 | 190 | 3 | 192 | 1.83e-24 | 96.7 |
MS.gene32605.t1 | MTR_5g076590 | 32.948 | 173 | 110 | 4 | 15 | 184 | 12 | 181 | 1.96e-24 | 96.3 |
MS.gene32605.t1 | MTR_6g079550 | 34.483 | 174 | 110 | 4 | 1 | 171 | 1 | 173 | 2.24e-24 | 96.3 |
MS.gene32605.t1 | MTR_1g068730 | 28.866 | 194 | 129 | 5 | 2 | 190 | 3 | 192 | 6.35e-24 | 95.1 |
MS.gene32605.t1 | MTR_2g083860 | 33.117 | 154 | 100 | 2 | 14 | 164 | 14 | 167 | 7.22e-24 | 95.1 |
MS.gene32605.t1 | MTR_2g090865 | 32.903 | 155 | 101 | 2 | 14 | 165 | 12 | 166 | 7.28e-24 | 95.1 |
MS.gene32605.t1 | MTR_1g115325 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 8.17e-24 | 94.7 |
MS.gene32605.t1 | MTR_8g090215 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 1.10e-23 | 94.4 |
MS.gene32605.t1 | MTR_2g005510 | 34.416 | 154 | 98 | 2 | 14 | 164 | 16 | 169 | 1.20e-23 | 94.7 |
MS.gene32605.t1 | MTR_3g086980 | 29.126 | 206 | 129 | 5 | 7 | 198 | 11 | 213 | 1.54e-23 | 94.4 |
MS.gene32605.t1 | MTR_7g100020 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 1.69e-23 | 94.0 |
MS.gene32605.t1 | MTR_2g075950 | 32.468 | 154 | 101 | 2 | 14 | 164 | 14 | 167 | 2.02e-23 | 94.0 |
MS.gene32605.t1 | MTR_3g096350 | 34.615 | 182 | 112 | 5 | 1 | 177 | 1 | 180 | 2.16e-23 | 93.6 |
MS.gene32605.t1 | MTR_6g021790 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 3.41e-23 | 93.2 |
MS.gene32605.t1 | MTR_8g036220 | 31.765 | 170 | 112 | 4 | 5 | 171 | 9 | 177 | 4.50e-23 | 93.2 |
MS.gene32605.t1 | MTR_8g031660 | 32.298 | 161 | 106 | 2 | 14 | 171 | 7 | 167 | 4.92e-23 | 92.8 |
MS.gene32605.t1 | MTR_8g031830 | 33.333 | 153 | 99 | 3 | 13 | 162 | 6 | 158 | 7.90e-23 | 92.0 |
MS.gene32605.t1 | MTR_2g102060 | 32.919 | 161 | 105 | 3 | 15 | 172 | 12 | 172 | 8.44e-23 | 91.7 |
MS.gene32605.t1 | MTR_7g103070 | 35.088 | 171 | 104 | 5 | 13 | 177 | 16 | 185 | 1.03e-22 | 92.0 |
MS.gene32605.t1 | MTR_7g081700 | 30.108 | 186 | 117 | 4 | 14 | 192 | 9 | 188 | 1.33e-22 | 91.3 |
MS.gene32605.t1 | MTR_4g069850 | 31.214 | 173 | 95 | 6 | 14 | 169 | 9 | 174 | 1.41e-22 | 91.3 |
MS.gene32605.t1 | MTR_4g012940 | 31.792 | 173 | 94 | 6 | 14 | 169 | 9 | 174 | 1.82e-22 | 91.3 |
MS.gene32605.t1 | MTR_8g006970 | 32.447 | 188 | 111 | 6 | 14 | 192 | 23 | 203 | 1.84e-22 | 91.3 |
MS.gene32605.t1 | MTR_7g405790 | 31.056 | 161 | 108 | 3 | 14 | 171 | 16 | 176 | 2.39e-22 | 91.3 |
MS.gene32605.t1 | MTR_2g101890 | 31.677 | 161 | 100 | 3 | 14 | 164 | 11 | 171 | 3.64e-22 | 90.5 |
MS.gene32605.t1 | MTR_2g096550 | 28.834 | 163 | 111 | 2 | 14 | 171 | 16 | 178 | 8.09e-22 | 89.7 |
MS.gene32605.t1 | MTR_4g063160 | 30.488 | 164 | 108 | 5 | 14 | 171 | 16 | 179 | 9.77e-22 | 89.4 |
MS.gene32605.t1 | MTR_8g107070 | 33.121 | 157 | 102 | 2 | 14 | 167 | 15 | 171 | 1.09e-21 | 90.5 |
MS.gene32605.t1 | MTR_8g027220 | 33.136 | 169 | 109 | 4 | 6 | 171 | 20 | 187 | 1.12e-21 | 89.7 |
MS.gene32605.t1 | MTR_1g062760 | 32.749 | 171 | 107 | 6 | 13 | 177 | 14 | 182 | 1.43e-21 | 89.0 |
MS.gene32605.t1 | MTR_8g006970 | 33.129 | 163 | 102 | 4 | 14 | 171 | 9 | 169 | 2.49e-21 | 87.4 |
MS.gene32605.t1 | MTR_1g052475 | 31.098 | 164 | 109 | 3 | 7 | 167 | 10 | 172 | 3.01e-21 | 88.2 |
MS.gene32605.t1 | MTR_0262s0050 | 32.716 | 162 | 105 | 4 | 9 | 167 | 12 | 172 | 3.49e-21 | 88.2 |
MS.gene32605.t1 | MTR_2g027660 | 31.646 | 158 | 105 | 2 | 14 | 168 | 7 | 164 | 4.02e-21 | 87.8 |
MS.gene32605.t1 | MTR_1g078200 | 30.114 | 176 | 117 | 5 | 1 | 171 | 1 | 175 | 1.53e-20 | 86.3 |
MS.gene32605.t1 | MTR_1g097420 | 27.072 | 181 | 119 | 4 | 24 | 191 | 46 | 226 | 1.74e-20 | 86.7 |
MS.gene32605.t1 | MTR_1g094220 | 29.193 | 161 | 110 | 3 | 15 | 171 | 33 | 193 | 5.94e-20 | 84.3 |
MS.gene32605.t1 | MTR_7g051940 | 28.571 | 161 | 112 | 3 | 14 | 171 | 14 | 174 | 6.08e-20 | 84.7 |
MS.gene32605.t1 | MTR_3g064390 | 33.071 | 127 | 84 | 1 | 15 | 140 | 12 | 138 | 9.76e-20 | 82.8 |
MS.gene32605.t1 | MTR_6g039490 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 1.33e-19 | 84.0 |
MS.gene32605.t1 | MTR_2g005500 | 30.061 | 163 | 107 | 4 | 14 | 171 | 10 | 170 | 1.37e-19 | 83.6 |
MS.gene32605.t1 | MTR_7g117910 | 36.434 | 129 | 80 | 2 | 7 | 134 | 15 | 142 | 3.33e-19 | 82.8 |
MS.gene32605.t1 | MTR_1g090717 | 29.442 | 197 | 123 | 7 | 10 | 199 | 13 | 200 | 1.00e-18 | 81.3 |
MS.gene32605.t1 | MTR_1g094220 | 29.012 | 162 | 107 | 4 | 15 | 168 | 33 | 194 | 1.32e-18 | 80.9 |
MS.gene32605.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 1.57e-18 | 80.5 |
MS.gene32605.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 3.20e-18 | 78.6 |
MS.gene32605.t1 | MTR_3g096350 | 38.400 | 125 | 72 | 4 | 7 | 128 | 7 | 129 | 4.99e-18 | 77.8 |
MS.gene32605.t1 | MTR_1g094220 | 29.221 | 154 | 105 | 3 | 15 | 164 | 33 | 186 | 7.42e-18 | 79.3 |
MS.gene32605.t1 | MTR_4g099470 | 30.128 | 156 | 100 | 4 | 42 | 192 | 13 | 164 | 1.60e-17 | 77.4 |
MS.gene32605.t1 | MTR_1g068730 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 2.40e-17 | 76.6 |
MS.gene32605.t1 | MTR_1g068740 | 30.769 | 130 | 88 | 2 | 2 | 129 | 3 | 132 | 4.04e-17 | 76.6 |
MS.gene32605.t1 | MTR_7g103070 | 36.066 | 122 | 73 | 3 | 61 | 177 | 8 | 129 | 1.81e-14 | 68.6 |
MS.gene32605.t1 | MTR_8g093740 | 35.246 | 122 | 74 | 3 | 61 | 177 | 27 | 148 | 2.27e-14 | 68.9 |
MS.gene32605.t1 | MTR_4g088055 | 27.879 | 165 | 104 | 4 | 14 | 164 | 7 | 170 | 3.02e-14 | 68.9 |
MS.gene32605.t1 | MTR_8g075240 | 28.485 | 165 | 103 | 4 | 14 | 164 | 7 | 170 | 5.06e-14 | 68.6 |
MS.gene32605.t1 | MTR_6g087980 | 33.051 | 118 | 77 | 2 | 14 | 130 | 7 | 123 | 6.89e-14 | 68.2 |
MS.gene32605.t1 | MTR_5g092060 | 26.012 | 173 | 121 | 1 | 10 | 175 | 101 | 273 | 1.98e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32605.t1 | AT5G55190 | 96.833 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 7.06e-164 | 451 |
MS.gene32605.t1 | AT5G20010 | 95.475 | 221 | 10 | 0 | 1 | 221 | 1 | 221 | 4.52e-161 | 444 |
MS.gene32605.t1 | AT5G20020 | 95.023 | 221 | 11 | 0 | 1 | 221 | 1 | 221 | 1.35e-152 | 422 |
MS.gene32605.t1 | AT5G55080 | 70.283 | 212 | 58 | 1 | 1 | 212 | 1 | 207 | 1.31e-108 | 311 |
MS.gene32605.t1 | AT4G39890 | 36.158 | 177 | 103 | 4 | 14 | 186 | 10 | 180 | 4.71e-28 | 105 |
MS.gene32605.t1 | AT1G07410 | 31.551 | 187 | 120 | 3 | 14 | 197 | 13 | 194 | 4.33e-26 | 100 |
MS.gene32605.t1 | AT4G19640 | 33.514 | 185 | 116 | 5 | 15 | 195 | 12 | 193 | 5.08e-26 | 100 |
MS.gene32605.t1 | AT2G44610 | 32.143 | 168 | 111 | 3 | 14 | 178 | 10 | 177 | 9.58e-26 | 99.8 |
MS.gene32605.t1 | AT4G18430 | 32.298 | 161 | 106 | 3 | 14 | 171 | 14 | 174 | 2.39e-25 | 99.0 |
MS.gene32605.t1 | AT5G45130 | 33.140 | 172 | 109 | 4 | 15 | 183 | 12 | 180 | 2.47e-25 | 98.6 |
MS.gene32605.t1 | AT5G39620 | 32.335 | 167 | 103 | 3 | 14 | 170 | 6 | 172 | 3.21e-25 | 98.2 |
MS.gene32605.t1 | AT5G59150 | 34.731 | 167 | 105 | 3 | 1 | 164 | 1 | 166 | 7.65e-25 | 97.8 |
MS.gene32605.t1 | AT5G45750 | 35.256 | 156 | 94 | 3 | 14 | 164 | 14 | 167 | 9.64e-25 | 97.4 |
MS.gene32605.t1 | AT4G18800 | 32.597 | 181 | 110 | 4 | 14 | 189 | 14 | 187 | 1.50e-24 | 96.7 |
MS.gene32605.t1 | AT1G09630 | 34.132 | 167 | 106 | 3 | 1 | 164 | 1 | 166 | 1.62e-24 | 96.7 |
MS.gene32605.t1 | AT2G21880 | 30.909 | 165 | 104 | 3 | 14 | 168 | 10 | 174 | 1.89e-24 | 96.7 |
MS.gene32605.t1 | AT5G65270 | 31.217 | 189 | 121 | 5 | 6 | 191 | 11 | 193 | 2.79e-24 | 96.3 |
MS.gene32605.t1 | AT5G60860 | 30.000 | 190 | 127 | 4 | 14 | 197 | 14 | 203 | 3.08e-24 | 96.3 |
MS.gene32605.t1 | AT2G22290 | 32.515 | 163 | 107 | 3 | 14 | 173 | 10 | 172 | 3.39e-24 | 95.9 |
MS.gene32605.t1 | AT1G18200 | 32.919 | 161 | 105 | 3 | 14 | 171 | 14 | 174 | 3.41e-24 | 96.3 |
MS.gene32605.t1 | AT4G09720 | 29.240 | 171 | 106 | 3 | 14 | 169 | 9 | 179 | 3.78e-24 | 95.9 |
MS.gene32605.t1 | AT4G39990 | 33.333 | 168 | 104 | 4 | 9 | 171 | 14 | 178 | 4.57e-24 | 95.9 |
MS.gene32605.t1 | AT3G15060 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 4.60e-24 | 95.5 |
MS.gene32605.t1 | AT4G09720 | 28.916 | 166 | 108 | 3 | 14 | 169 | 9 | 174 | 5.05e-24 | 95.1 |
MS.gene32605.t1 | AT3G18820 | 30.882 | 204 | 113 | 7 | 14 | 200 | 9 | 201 | 6.04e-24 | 95.1 |
MS.gene32605.t1 | AT1G22740 | 29.630 | 189 | 120 | 6 | 14 | 189 | 9 | 197 | 6.21e-24 | 95.1 |
MS.gene32605.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene32605.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene32605.t1 | AT3G53610 | 28.729 | 181 | 121 | 4 | 14 | 190 | 16 | 192 | 6.58e-24 | 95.1 |
MS.gene32605.t1 | AT5G59840 | 29.319 | 191 | 123 | 5 | 14 | 196 | 16 | 202 | 6.65e-24 | 95.1 |
MS.gene32605.t1 | AT5G10260 | 32.738 | 168 | 110 | 3 | 14 | 178 | 10 | 177 | 1.29e-23 | 94.4 |
MS.gene32605.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene32605.t1 | AT3G46830 | 34.783 | 161 | 101 | 3 | 7 | 164 | 7 | 166 | 1.53e-23 | 94.4 |
MS.gene32605.t1 | AT5G45130 | 32.353 | 170 | 109 | 4 | 17 | 183 | 22 | 188 | 1.63e-23 | 94.0 |
MS.gene32605.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene32605.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene32605.t1 | AT3G46060 | 30.247 | 162 | 109 | 3 | 14 | 171 | 16 | 177 | 2.35e-23 | 93.6 |
MS.gene32605.t1 | AT4G09720 | 28.249 | 177 | 106 | 3 | 14 | 169 | 9 | 185 | 2.36e-23 | 94.0 |
MS.gene32605.t1 | AT4G17530 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 5.18e-23 | 92.4 |
MS.gene32605.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 6.45e-23 | 92.4 |
MS.gene32605.t1 | AT5G03530 | 32.353 | 170 | 109 | 4 | 13 | 177 | 13 | 181 | 6.45e-23 | 92.4 |
MS.gene32605.t1 | AT5G47200 | 30.435 | 184 | 119 | 4 | 14 | 192 | 9 | 188 | 7.26e-23 | 92.0 |
MS.gene32605.t1 | AT1G73640 | 32.544 | 169 | 110 | 4 | 6 | 171 | 7 | 174 | 9.00e-23 | 92.8 |
MS.gene32605.t1 | AT3G12160 | 32.927 | 164 | 106 | 4 | 7 | 167 | 10 | 172 | 9.85e-23 | 92.4 |
MS.gene32605.t1 | AT5G47960 | 33.951 | 162 | 103 | 4 | 7 | 165 | 10 | 170 | 9.95e-23 | 92.4 |
MS.gene32605.t1 | AT5G64990 | 28.079 | 203 | 124 | 6 | 14 | 203 | 8 | 201 | 1.59e-22 | 91.3 |
MS.gene32605.t1 | AT2G33870 | 30.270 | 185 | 123 | 4 | 14 | 192 | 14 | 198 | 1.89e-22 | 91.3 |
MS.gene32605.t1 | AT3G16100 | 29.798 | 198 | 123 | 5 | 14 | 200 | 9 | 201 | 2.09e-22 | 90.9 |
MS.gene32605.t1 | AT1G28550 | 29.730 | 185 | 124 | 4 | 14 | 192 | 14 | 198 | 2.28e-22 | 91.3 |
MS.gene32605.t1 | AT1G06400 | 33.766 | 154 | 99 | 3 | 14 | 164 | 14 | 167 | 2.41e-22 | 91.3 |
MS.gene32605.t1 | AT1G02130 | 30.811 | 185 | 118 | 5 | 14 | 192 | 9 | 189 | 3.18e-22 | 90.5 |
MS.gene32605.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.35e-22 | 90.5 |
MS.gene32605.t1 | AT1G49300 | 31.977 | 172 | 93 | 6 | 14 | 168 | 9 | 173 | 3.35e-22 | 90.5 |
MS.gene32605.t1 | AT1G52280 | 29.293 | 198 | 124 | 6 | 14 | 200 | 9 | 201 | 4.14e-22 | 90.1 |
MS.gene32605.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene32605.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene32605.t1 | AT1G43890 | 33.136 | 169 | 107 | 4 | 14 | 177 | 14 | 181 | 4.19e-22 | 90.5 |
MS.gene32605.t1 | AT1G16920 | 31.818 | 154 | 102 | 2 | 14 | 164 | 14 | 167 | 4.76e-22 | 90.5 |
MS.gene32605.t1 | AT2G43130 | 27.461 | 193 | 136 | 4 | 14 | 203 | 13 | 204 | 7.02e-22 | 89.7 |
MS.gene32605.t1 | AT4G35860 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 7.55e-22 | 89.7 |
MS.gene32605.t1 | AT1G01200 | 31.953 | 169 | 110 | 4 | 7 | 171 | 23 | 190 | 1.00e-21 | 90.1 |
MS.gene32605.t1 | AT4G17160 | 30.380 | 158 | 107 | 2 | 14 | 168 | 7 | 164 | 3.11e-21 | 87.8 |
MS.gene32605.t1 | AT4G17170 | 31.056 | 161 | 108 | 2 | 14 | 171 | 7 | 167 | 6.21e-21 | 87.4 |
MS.gene32605.t1 | AT3G07410 | 29.310 | 174 | 120 | 3 | 14 | 184 | 13 | 186 | 1.16e-20 | 86.7 |
MS.gene32605.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 13 | 166 | 1.31e-20 | 86.7 |
MS.gene32605.t1 | AT5G47520 | 30.435 | 161 | 109 | 3 | 14 | 171 | 15 | 175 | 1.42e-20 | 86.7 |
MS.gene32605.t1 | AT1G05810 | 30.519 | 154 | 104 | 3 | 14 | 164 | 59 | 212 | 3.80e-20 | 86.3 |
MS.gene32605.t1 | AT4G19640 | 35.938 | 128 | 80 | 2 | 15 | 140 | 12 | 139 | 5.33e-20 | 83.2 |
MS.gene32605.t1 | AT4G19640 | 34.043 | 141 | 90 | 3 | 15 | 152 | 12 | 152 | 6.69e-20 | 84.0 |
MS.gene32605.t1 | AT5G64990 | 27.143 | 210 | 124 | 7 | 14 | 203 | 8 | 208 | 8.72e-20 | 84.3 |
MS.gene32605.t1 | AT3G54840 | 29.814 | 161 | 109 | 4 | 15 | 171 | 35 | 195 | 9.45e-20 | 84.0 |
MS.gene32605.t1 | AT5G03520 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 1.66e-19 | 83.6 |
MS.gene32605.t1 | AT2G31680 | 29.193 | 161 | 111 | 3 | 14 | 171 | 13 | 173 | 1.68e-19 | 83.6 |
MS.gene32605.t1 | AT3G11730 | 28.108 | 185 | 126 | 3 | 14 | 191 | 9 | 193 | 2.80e-19 | 82.8 |
MS.gene32605.t1 | AT3G54840 | 29.375 | 160 | 109 | 4 | 16 | 171 | 2 | 161 | 3.55e-19 | 81.6 |
MS.gene32605.t1 | AT3G09900 | 28.272 | 191 | 128 | 5 | 4 | 189 | 5 | 191 | 3.68e-19 | 82.8 |
MS.gene32605.t1 | AT3G54840 | 30.519 | 154 | 103 | 4 | 15 | 164 | 35 | 188 | 1.61e-18 | 80.5 |
MS.gene32605.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene32605.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene32605.t1 | AT3G09910 | 31.176 | 170 | 111 | 4 | 13 | 177 | 13 | 181 | 1.88e-17 | 77.8 |
MS.gene32605.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.62e-17 | 77.0 |
MS.gene32605.t1 | AT2G21880 | 29.530 | 149 | 95 | 3 | 30 | 168 | 1 | 149 | 2.62e-17 | 77.0 |
MS.gene32605.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.83e-17 | 75.9 |
MS.gene32605.t1 | AT3G09910 | 31.098 | 164 | 107 | 4 | 13 | 171 | 13 | 175 | 9.83e-17 | 75.9 |
MS.gene32605.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene32605.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene32605.t1 | AT4G09720 | 28.777 | 139 | 89 | 3 | 41 | 169 | 2 | 140 | 1.96e-16 | 74.3 |
MS.gene32605.t1 | AT2G21880 | 29.091 | 165 | 99 | 5 | 14 | 168 | 10 | 166 | 3.62e-16 | 74.3 |
MS.gene32605.t1 | AT4G35860 | 31.858 | 113 | 74 | 2 | 62 | 171 | 9 | 121 | 5.95e-15 | 70.1 |
MS.gene32605.t1 | AT5G03520 | 29.323 | 133 | 86 | 4 | 61 | 189 | 53 | 181 | 6.58e-15 | 70.9 |
MS.gene32605.t1 | AT5G59150 | 33.962 | 106 | 67 | 2 | 62 | 164 | 10 | 115 | 5.65e-14 | 67.8 |
MS.gene32605.t1 | AT4G35950 | 29.697 | 165 | 101 | 4 | 14 | 164 | 7 | 170 | 6.44e-14 | 68.2 |
MS.gene32605.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 9.02e-14 | 67.8 |
MS.gene32605.t1 | AT2G17800 | 31.933 | 119 | 79 | 2 | 14 | 131 | 7 | 124 | 9.02e-14 | 67.8 |
MS.gene32605.t1 | AT3G51300 | 32.203 | 118 | 78 | 2 | 15 | 131 | 8 | 124 | 1.07e-13 | 67.4 |
MS.gene32605.t1 | AT4G28950 | 28.834 | 163 | 103 | 4 | 14 | 164 | 7 | 168 | 1.36e-13 | 67.4 |
MS.gene32605.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.65e-11 | 58.5 |
MS.gene32605.t1 | AT4G35020 | 30.702 | 114 | 77 | 2 | 15 | 127 | 8 | 120 | 7.65e-11 | 58.5 |
Find 58 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAAATCAATTTGAACTTC+TGG | 0.258290 | 3.1:+85222176 | None:intergenic |
GATTCTACAAAGTGCAAGTT+AGG | 0.300639 | 3.1:+85222215 | None:intergenic |
ACCAGAAGTTCAAATTGATT+TGG | 0.314372 | 3.1:-85222177 | MS.gene32605:CDS |
TTTGTGAAGAGGCATCTTAC+TGG | 0.332899 | 3.1:-85223669 | MS.gene32605:CDS |
TAATCAACGGTTTGCTGATT+GGG | 0.341509 | 3.1:+85223895 | None:intergenic |
TACCTTGCTAGGAAGCTTGC+AGG | 0.343483 | 3.1:-85222340 | MS.gene32605:CDS |
GCAAGATTCGCTTCTACTGC+TGG | 0.380027 | 3.1:-85223462 | MS.gene32605:CDS |
TTGTTACCGCAAAGAACAAT+TGG | 0.403385 | 3.1:+85222481 | None:intergenic |
AACATCCCAATTGTTCTTTG+CGG | 0.404004 | 3.1:-85222487 | MS.gene32605:CDS |
GTAATCAACGGTTTGCTGAT+TGG | 0.420523 | 3.1:+85223894 | None:intergenic |
GAAGGGGTTGATTGGCAGCT+TGG | 0.435439 | 3.1:+85221554 | None:intergenic |
CCTGGCACCGTGATCTTTGT+CGG | 0.450109 | 3.1:-85222629 | MS.gene32605:intron |
GTCATCAGGAAGGGGTTGAT+TGG | 0.454313 | 3.1:+85221546 | None:intergenic |
CTTTGTAGAATCTCCTGCAT+TGG | 0.466850 | 3.1:-85222204 | MS.gene32605:CDS |
CAGGCAAGTGAAGGCAAAGC+AGG | 0.468849 | 3.1:-85222443 | MS.gene32605:CDS |
ACTGCTGGACAAGAGAAGTT+TGG | 0.471338 | 3.1:-85223436 | MS.gene32605:CDS |
ACAAGGTTGATGTGAAGAAC+AGG | 0.475162 | 3.1:-85222462 | MS.gene32605:CDS |
CGATGACAAGCTTGAAGCTC+GGG | 0.476801 | 3.1:+85223872 | None:intergenic |
ATCGTCGGCGATGGCGGCAC+TGG | 0.486311 | 3.1:-85223853 | MS.gene32605:intron |
CTTGTCATCGTCGGCGATGG+CGG | 0.488335 | 3.1:-85223859 | MS.gene32605:CDS |
AATGCATCATCATCGTCATC+AGG | 0.495924 | 3.1:+85221532 | None:intergenic |
TGATTGTAAACAGCTACAAT+TGG | 0.508837 | 3.1:-85223523 | MS.gene32605:intron |
CAAGCTTCCTAGCAAGGTAA+AGG | 0.519388 | 3.1:+85222344 | None:intergenic |
CTTTATATTGCAGTATCCAC+GGG | 0.523043 | 3.1:-85222710 | MS.gene32605:intron |
CCGACAAAGATCACGGTGCC+AGG | 0.524098 | 3.1:+85222629 | None:intergenic |
AAGCTTGTCATCGTCGGCGA+TGG | 0.529447 | 3.1:-85223862 | MS.gene32605:CDS |
TCTTTATATTGCAGTATCCA+CGG | 0.531789 | 3.1:-85222711 | MS.gene32605:intron |
ACTTCTGGTGGAGCCAATGC+AGG | 0.537856 | 3.1:+85222191 | None:intergenic |
AGCTTCAAGCTTGTCATCGT+CGG | 0.540576 | 3.1:-85223868 | MS.gene32605:CDS |
AAGTTTGGTGGTCTCAGAGA+TGG | 0.543632 | 3.1:-85223421 | MS.gene32605:CDS |
TTCTACTGCTGGGATACTGC+TGG | 0.543775 | 3.1:-85223451 | MS.gene32605:CDS |
AATTGTTCTTTGCGGTAACA+AGG | 0.546634 | 3.1:-85222479 | MS.gene32605:CDS |
CAAAGCAGGTTACTTTCCAC+AGG | 0.547056 | 3.1:-85222429 | MS.gene32605:CDS |
CATCATCATCGTCATCAGGA+AGG | 0.549641 | 3.1:+85221536 | None:intergenic |
TGTTACCGCAAAGAACAATT+GGG | 0.552031 | 3.1:+85222482 | None:intergenic |
ATCATCATCGTCATCAGGAA+GGG | 0.552321 | 3.1:+85221537 | None:intergenic |
AGCCATTCCTTTACCTTGCT+AGG | 0.553251 | 3.1:-85222351 | MS.gene32605:CDS |
AAATCAATTTGAACTTCTGG+TGG | 0.563330 | 3.1:+85222179 | None:intergenic |
CAAGATTCGCTTCTACTGCT+GGG | 0.564996 | 3.1:-85223461 | MS.gene32605:CDS |
TTGATTTGGCTGCACAACAA+AGG | 0.579779 | 3.1:-85222163 | MS.gene32605:intron |
CTTGAAGCTCGGGTAATCAA+CGG | 0.586019 | 3.1:+85223882 | None:intergenic |
ACCCTGCAAGCTTCCTAGCA+AGG | 0.586472 | 3.1:+85222338 | None:intergenic |
TTGGATTTCTTCACAAACTG+CGG | 0.590990 | 3.1:-85223484 | MS.gene32605:CDS |
ACGATGACAAGCTTGAAGCT+CGG | 0.595291 | 3.1:+85223871 | None:intergenic |
GAAAGACAACATTTGTGAAG+AGG | 0.596908 | 3.1:-85223680 | MS.gene32605:CDS |
ATTCTACAAAGTGCAAGTTA+GGG | 0.598867 | 3.1:+85222216 | None:intergenic |
TGGTGTGGAAGTGCATCCAT+TGG | 0.604734 | 3.1:-85223503 | MS.gene32605:CDS |
TTCCTAGCAAGGTAAAGGAA+TGG | 0.606313 | 3.1:+85222349 | None:intergenic |
CAAAGATCACGGTGCCAGGT+AGG | 0.607872 | 3.1:+85222633 | None:intergenic |
CAGTTTGTGAAGAAATCCAA+TGG | 0.610326 | 3.1:+85223487 | None:intergenic |
ACCTTGCTAGGAAGCTTGCA+GGG | 0.610380 | 3.1:-85222339 | MS.gene32605:intron |
TGTGAAGAACAGGCAAGTGA+AGG | 0.615131 | 3.1:-85222452 | MS.gene32605:CDS |
GCTGGACAAGAGAAGTTTGG+TGG | 0.616663 | 3.1:-85223433 | MS.gene32605:CDS |
TCATCATCGTCATCAGGAAG+GGG | 0.618873 | 3.1:+85221538 | None:intergenic |
TTATAATAGCACATTGCCCG+TGG | 0.636385 | 3.1:+85222694 | None:intergenic |
CGATGATGATGCATTTGAGT+AGG | 0.644342 | 3.1:-85221524 | None:intergenic |
GTAAACAGCTACAATTGGTG+TGG | 0.644898 | 3.1:-85223518 | MS.gene32605:intron |
TTACTAACCGACAAAGATCA+CGG | 0.655820 | 3.1:+85222622 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAGTCTACATTTA+TGG | + | chr3.1:85222520-85222539 | None:intergenic | 15.0% |
!!! | ATTTTGAATTTCTCATTTAA+TGG | - | chr3.1:85223912-85223931 | MS.gene32605:intron | 15.0% |
!!! | GTAAGATTCATTTTAATTTA+GGG | - | chr3.1:85221895-85221914 | MS.gene32605:intron | 15.0% |
!!! | TTTTTTTTTCGTGTTAATAA+GGG | - | chr3.1:85222531-85222550 | MS.gene32605:intron | 15.0% |
!! | AGAGATTGAAAATAAATTTC+TGG | - | chr3.1:85223671-85223690 | MS.gene32605:CDS | 20.0% |
!! | AGATTGAAAATAAATTTCTG+GGG | - | chr3.1:85223673-85223692 | MS.gene32605:CDS | 20.0% |
!! | ATACATTTAAATAAATGACG+AGG | + | chr3.1:85222137-85222156 | None:intergenic | 20.0% |
!! | ATTCTATGTTACATATTTCA+CGG | + | chr3.1:85221742-85221761 | None:intergenic | 20.0% |
!! | ATTGTAGGATAAAGAATAAA+AGG | + | chr3.1:85223401-85223420 | None:intergenic | 20.0% |
!! | GAGATTGAAAATAAATTTCT+GGG | - | chr3.1:85223672-85223691 | MS.gene32605:CDS | 20.0% |
!! | GATATTCCTAAAAAAACTAA+TGG | + | chr3.1:85223840-85223859 | None:intergenic | 20.0% |
!! | GCTAATATACAAACTTATTA+TGG | - | chr3.1:85223579-85223598 | MS.gene32605:intron | 20.0% |
!! | TATCATTAGGTATACATTAT+TGG | - | chr3.1:85223699-85223718 | MS.gene32605:intron | 20.0% |
!! | TTAACAAGCATGATTATATA+CGG | - | chr3.1:85221918-85221937 | MS.gene32605:intron | 20.0% |
!!! | AAAAAAACTAATGGATGTTA+TGG | + | chr3.1:85223831-85223850 | None:intergenic | 20.0% |
!!! | AATAATGATCATTTTCTTAC+AGG | - | chr3.1:85221816-85221835 | MS.gene32605:intron | 20.0% |
!!! | AATTGTTATTGTTAATCGAA+CGG | + | chr3.1:85221576-85221595 | None:intergenic | 20.0% |
!!! | CAAACAAAGTGTTAAAAAAA+AGG | + | chr3.1:85222937-85222956 | None:intergenic | 20.0% |
!!! | CGTAAGATTCATTTTAATTT+AGG | - | chr3.1:85221894-85221913 | MS.gene32605:intron | 20.0% |
!!! | CTTTTTTTTAACACTTTGTT+TGG | - | chr3.1:85222935-85222954 | MS.gene32605:intron | 20.0% |
!!! | CTTTTTTTTTCGTGTTAATA+AGG | - | chr3.1:85222530-85222549 | MS.gene32605:intron | 20.0% |
!!! | TAACATCCATTAGTTTTTTT+AGG | - | chr3.1:85223831-85223850 | MS.gene32605:intron | 20.0% |
! | ACTAAAAAAAGAAGCGATAA+AGG | + | chr3.1:85221713-85221732 | None:intergenic | 25.0% |
! | ATCCTACAATCATTCATTAT+AGG | - | chr3.1:85223411-85223430 | MS.gene32605:intron | 25.0% |
! | CAAAATACTGATAAATGCAA+GGG | + | chr3.1:85222579-85222598 | None:intergenic | 25.0% |
! | GTAATATTGGCACAAAAAAA+AGG | + | chr3.1:85222447-85222466 | None:intergenic | 25.0% |
! | GTGTTAAAAAAAAGGTTTCA+AGG | + | chr3.1:85222929-85222948 | None:intergenic | 25.0% |
! | TAAATTCATAGTTGAAGTGA+AGG | + | chr3.1:85222397-85222416 | None:intergenic | 25.0% |
! | TAATATGTTCATTGTAGCAT+TGG | - | chr3.1:85223439-85223458 | MS.gene32605:CDS | 25.0% |
! | TACTGCAATATAAAGATAAC+AGG | + | chr3.1:85222803-85222822 | None:intergenic | 25.0% |
! | TCATTATCATAATATTGTGC+TGG | - | chr3.1:85222494-85222513 | MS.gene32605:CDS | 25.0% |
!! | AACATTTTTGTATGTTAGAC+GGG | + | chr3.1:85222865-85222884 | None:intergenic | 25.0% |
!! | CTTGCATTTATCAGTATTTT+GGG | - | chr3.1:85222578-85222597 | MS.gene32605:intron | 25.0% |
!! | GAACATTTTTGTATGTTAGA+CGG | + | chr3.1:85222866-85222885 | None:intergenic | 25.0% |
!! | GATTGAAAATAAATTTCTGG+GGG | - | chr3.1:85223674-85223693 | MS.gene32605:CDS | 25.0% |
!!! | TGTCTTTTTGATGACATAAT+AGG | - | chr3.1:85222724-85222743 | MS.gene32605:intron | 25.0% |
AAAAGAAGCGATAAAGGAAA+AGG | + | chr3.1:85221707-85221726 | None:intergenic | 30.0% | |
AAATCAATTTGAACTTCTGG+TGG | + | chr3.1:85223342-85223361 | None:intergenic | 30.0% | |
ACCAGAAGTTCAAATTGATT+TGG | - | chr3.1:85223341-85223360 | MS.gene32605:intron | 30.0% | |
AGCAAGTAAAACAAGAACAA+AGG | + | chr3.1:85222679-85222698 | None:intergenic | 30.0% | |
AGGAAAAGGAAAAAAGAGAT+TGG | + | chr3.1:85221693-85221712 | None:intergenic | 30.0% | |
ATAAAGCAACATAAGGAACA+TGG | + | chr3.1:85222971-85222990 | None:intergenic | 30.0% | |
ATTCTACAAAGTGCAAGTTA+GGG | + | chr3.1:85223305-85223324 | None:intergenic | 30.0% | |
CCAAAATACTGATAAATGCA+AGG | + | chr3.1:85222580-85222599 | None:intergenic | 30.0% | |
GTTAAATCAAATGATCCATG+TGG | - | chr3.1:85222310-85222329 | MS.gene32605:intron | 30.0% | |
TAAGTGATATACAAACCACA+TGG | + | chr3.1:85222328-85222347 | None:intergenic | 30.0% | |
TCTTTATATTGCAGTATCCA+CGG | - | chr3.1:85222807-85222826 | MS.gene32605:intron | 30.0% | |
TGATTGTAAACAGCTACAAT+TGG | - | chr3.1:85221995-85222014 | MS.gene32605:intron | 30.0% | |
TGCCTATAATGAATGATTGT+AGG | + | chr3.1:85223416-85223435 | None:intergenic | 30.0% | |
TGTAGTGGTTATATACATGT+CGG | - | chr3.1:85222625-85222644 | MS.gene32605:intron | 30.0% | |
! | CATGGATCATTTGATTTAAC+AGG | + | chr3.1:85222310-85222329 | None:intergenic | 30.0% |
! | CCTTGCATTTATCAGTATTT+TGG | - | chr3.1:85222577-85222596 | MS.gene32605:intron | 30.0% |
!! | ATGTTCCTTATGTTGCTTTA+TGG | - | chr3.1:85222970-85222989 | MS.gene32605:intron | 30.0% |
!! | ATTGATTTGGAAGTGAACTT+CGG | - | chr3.1:85221786-85221805 | MS.gene32605:intron | 30.0% |
!! | CGTAGTCATTTTATATGTGT+CGG | - | chr3.1:85222701-85222720 | MS.gene32605:intron | 30.0% |
!! | CTATTTGGAACTGATTTTCA+GGG | - | chr3.1:85223000-85223019 | MS.gene32605:intron | 30.0% |
!! | TGTGTTCTCAAGTTTTTAAG+TGG | - | chr3.1:85222275-85222294 | MS.gene32605:intron | 30.0% |
!!! | TTTTTTCGTGTTAATAAGGG+TGG | - | chr3.1:85222534-85222553 | MS.gene32605:intron | 30.0% |
!!! | TTTTTTGTGCCAATATTACG+TGG | - | chr3.1:85222448-85222467 | MS.gene32605:CDS | 30.0% |
AACAGGGAATTTGGTTAAAC+AGG | + | chr3.1:85222186-85222205 | None:intergenic | 35.0% | |
AACATCCCAATTGTTCTTTG+CGG | - | chr3.1:85223031-85223050 | MS.gene32605:intron | 35.0% | |
AAGTGTTACATAAACCGAAC+AGG | + | chr3.1:85222203-85222222 | None:intergenic | 35.0% | |
AATTGTTCTTTGCGGTAACA+AGG | - | chr3.1:85223039-85223058 | MS.gene32605:intron | 35.0% | |
ACACAGCATTTAAACTCATG+AGG | + | chr3.1:85223613-85223632 | None:intergenic | 35.0% | |
AGTGTCCATAAAGCAACATA+AGG | + | chr3.1:85222978-85222997 | None:intergenic | 35.0% | |
AGTGTTACATAAACCGAACA+GGG | + | chr3.1:85222202-85222221 | None:intergenic | 35.0% | |
ATTGTTAATCGAACGGCAAA+AGG | + | chr3.1:85221569-85221588 | None:intergenic | 35.0% | |
CAAAAGGAATAGCGTGAAAT+CGG | + | chr3.1:85221553-85221572 | None:intergenic | 35.0% | |
CAACAAAGGTAAGCTATCTT+TGG | - | chr3.1:85223369-85223388 | MS.gene32605:intron | 35.0% | |
CACAACCATCATTGATATGA+GGG | - | chr3.1:85223507-85223526 | MS.gene32605:CDS | 35.0% | |
CAGTTTGTGAAGAAATCCAA+TGG | + | chr3.1:85222034-85222053 | None:intergenic | 35.0% | |
CATAACCCTCATATCAATGA+TGG | + | chr3.1:85223515-85223534 | None:intergenic | 35.0% | |
CATACAAAAATGTTCCTACC+TGG | - | chr3.1:85222871-85222890 | MS.gene32605:intron | 35.0% | |
CATAGAATCAGTGATTCGTT+AGG | - | chr3.1:85221754-85221773 | MS.gene32605:intron | 35.0% | |
CCTGAAAATCAGTTCCAAAT+AGG | + | chr3.1:85223002-85223021 | None:intergenic | 35.0% | |
CTTTATATTGCAGTATCCAC+GGG | - | chr3.1:85222808-85222827 | MS.gene32605:intron | 35.0% | |
CTTTATGGACACTTCCTATT+TGG | - | chr3.1:85222985-85223004 | MS.gene32605:intron | 35.0% | |
GAAAGACAACATTTGTGAAG+AGG | - | chr3.1:85221838-85221857 | MS.gene32605:intron | 35.0% | |
GACATAATAGGATTCTCCTT+CGG | - | chr3.1:85222736-85222755 | MS.gene32605:intron | 35.0% | |
GATTCTACAAAGTGCAAGTT+AGG | + | chr3.1:85223306-85223325 | None:intergenic | 35.0% | |
GCCAAATCAATTTGAACTTC+TGG | + | chr3.1:85223345-85223364 | None:intergenic | 35.0% | |
GTTTAACCAAATTCCCTGTT+CGG | - | chr3.1:85222186-85222205 | MS.gene32605:CDS | 35.0% | |
TCACAACCATCATTGATATG+AGG | - | chr3.1:85223506-85223525 | MS.gene32605:CDS | 35.0% | |
TGTTACCGCAAAGAACAATT+GGG | + | chr3.1:85223039-85223058 | None:intergenic | 35.0% | |
TTACTAACCGACAAAGATCA+CGG | + | chr3.1:85222899-85222918 | None:intergenic | 35.0% | |
TTGGATTTCTTCACAAACTG+CGG | - | chr3.1:85222034-85222053 | MS.gene32605:intron | 35.0% | |
TTGTTACCGCAAAGAACAAT+TGG | + | chr3.1:85223040-85223059 | None:intergenic | 35.0% | |
! | ACACGTGGATTAATGTTCAA+CGG | + | chr3.1:85223737-85223756 | None:intergenic | 35.0% |
! | ACTGCAAATTTTTCTTCCTG+TGG | + | chr3.1:85223108-85223127 | None:intergenic | 35.0% |
! | ATTGTAGCATTGGAAAGTAG+TGG | - | chr3.1:85223449-85223468 | MS.gene32605:CDS | 35.0% |
! | TAGGATCTGGCATATTGATT+TGG | - | chr3.1:85221773-85221792 | MS.gene32605:intron | 35.0% |
!! | CCTATTTGGAACTGATTTTC+AGG | - | chr3.1:85222999-85223018 | MS.gene32605:intron | 35.0% |
!! | GGTTGTGAGACTTTGATTTT+AGG | + | chr3.1:85223494-85223513 | None:intergenic | 35.0% |
!! | TAATCAACGGTTTGCTGATT+GGG | + | chr3.1:85221626-85221645 | None:intergenic | 35.0% |
!! | TCAATTGCTTGCTTTTGTAG+TGG | - | chr3.1:85222610-85222629 | MS.gene32605:intron | 35.0% |
!! | TTTCTAGTTTCTACACAGTC+AGG | - | chr3.1:85223213-85223232 | MS.gene32605:intron | 35.0% |
!!! | CTGTGATCTCTAGTTTTTGA+TGG | - | chr3.1:85222157-85222176 | MS.gene32605:intron | 35.0% |
AATGCATCATCATCGTCATC+AGG | + | chr3.1:85223989-85224008 | None:intergenic | 40.0% | |
AGGGATGATGAAAAAACACG+TGG | + | chr3.1:85223752-85223771 | None:intergenic | 40.0% | |
ATCAGTGATTCGTTAGGATC+TGG | - | chr3.1:85221760-85221779 | MS.gene32605:intron | 40.0% | |
ATCATCATCGTCATCAGGAA+GGG | + | chr3.1:85223984-85224003 | None:intergenic | 40.0% | |
CATAAACCGAACAGGGAATT+TGG | + | chr3.1:85222195-85222214 | None:intergenic | 40.0% | |
CTTTGTAGAATCTCCTGCAT+TGG | - | chr3.1:85223314-85223333 | MS.gene32605:intron | 40.0% | |
GTAAACAGCTACAATTGGTG+TGG | - | chr3.1:85222000-85222019 | MS.gene32605:intron | 40.0% | |
GTACTGCATATTCCTAAACG+AGG | + | chr3.1:85223793-85223812 | None:intergenic | 40.0% | |
TGCAACACACCACGTAATAT+TGG | + | chr3.1:85222460-85222479 | None:intergenic | 40.0% | |
TTATAATAGCACATTGCCCG+TGG | + | chr3.1:85222827-85222846 | None:intergenic | 40.0% | |
TTCCTAGCAAGGTAAAGGAA+TGG | + | chr3.1:85223172-85223191 | None:intergenic | 40.0% | |
! | ATTTCTGGGGGCATATCATT+AGG | - | chr3.1:85223686-85223705 | MS.gene32605:intron | 40.0% |
! | TCATCGTGTTTTTCTTCTGC+AGG | - | chr3.1:85221595-85221614 | MS.gene32605:intron | 40.0% |
!! | ACAAGGTTGATGTGAAGAAC+AGG | - | chr3.1:85223056-85223075 | MS.gene32605:intron | 40.0% |
!! | GTAATCAACGGTTTGCTGAT+TGG | + | chr3.1:85221627-85221646 | None:intergenic | 40.0% |
!! | TAATAAGGGTGGCTGTTTCT+TGG | - | chr3.1:85222545-85222564 | MS.gene32605:intron | 40.0% |
!! | TTGATTTGGCTGCACAACAA+AGG | - | chr3.1:85223355-85223374 | MS.gene32605:intron | 40.0% |
!! | TTTGTGAAGAGGCATCTTAC+TGG | - | chr3.1:85221849-85221868 | MS.gene32605:intron | 40.0% |
AAACGAGGCGGATAAAAGGA+AGG | + | chr3.1:85223778-85223797 | None:intergenic | 45.0% | |
AACGAGGCGGATAAAAGGAA+GGG | + | chr3.1:85223777-85223796 | None:intergenic | 45.0% | |
ACAAGCACAAACAATGCCGA+AGG | + | chr3.1:85222755-85222774 | None:intergenic | 45.0% | |
ACGATGACAAGCTTGAAGCT+CGG | + | chr3.1:85221650-85221669 | None:intergenic | 45.0% | |
ACTGCTGGACAAGAGAAGTT+TGG | - | chr3.1:85222082-85222101 | MS.gene32605:intron | 45.0% | |
AGCCATTCCTTTACCTTGCT+AGG | - | chr3.1:85223167-85223186 | MS.gene32605:intron | 45.0% | |
AGCTTCAAGCTTGTCATCGT+CGG | - | chr3.1:85221650-85221669 | MS.gene32605:intron | 45.0% | |
CAAGATTCGCTTCTACTGCT+GGG | - | chr3.1:85222057-85222076 | MS.gene32605:intron | 45.0% | |
CAAGCTTCCTAGCAAGGTAA+AGG | + | chr3.1:85223177-85223196 | None:intergenic | 45.0% | |
CATCATCATCGTCATCAGGA+AGG | + | chr3.1:85223985-85224004 | None:intergenic | 45.0% | |
CTGCATATTCCTAAACGAGG+CGG | + | chr3.1:85223790-85223809 | None:intergenic | 45.0% | |
CTTGAAGCTCGGGTAATCAA+CGG | + | chr3.1:85221639-85221658 | None:intergenic | 45.0% | |
TCATCATCGTCATCAGGAAG+GGG | + | chr3.1:85223983-85224002 | None:intergenic | 45.0% | |
TCCTAAACGAGGCGGATAAA+AGG | + | chr3.1:85223782-85223801 | None:intergenic | 45.0% | |
TGTGAAGAACAGGCAAGTGA+AGG | - | chr3.1:85223066-85223085 | MS.gene32605:intron | 45.0% | |
! | AAGTTTGGTGGTCTCAGAGA+TGG | - | chr3.1:85222097-85222116 | MS.gene32605:intron | 45.0% |
! | CAAAGCAGGTTACTTTCCAC+AGG | - | chr3.1:85223089-85223108 | MS.gene32605:intron | 45.0% |
! | TCCTTTTATCCGCCTCGTTT+AGG | - | chr3.1:85223778-85223797 | MS.gene32605:intron | 45.0% |
ACCTTGCTAGGAAGCTTGCA+GGG | - | chr3.1:85223179-85223198 | MS.gene32605:intron | 50.0% | |
CGATGACAAGCTTGAAGCTC+GGG | + | chr3.1:85221649-85221668 | None:intergenic | 50.0% | |
GCAAGATTCGCTTCTACTGC+TGG | - | chr3.1:85222056-85222075 | MS.gene32605:intron | 50.0% | |
GCGGATAAAAGGAAGGGACA+GGG | + | chr3.1:85223771-85223790 | None:intergenic | 50.0% | |
GCTGGACAAGAGAAGTTTGG+TGG | - | chr3.1:85222085-85222104 | MS.gene32605:intron | 50.0% | |
TACCTTGCTAGGAAGCTTGC+AGG | - | chr3.1:85223178-85223197 | MS.gene32605:intron | 50.0% | |
TTCTACTGCTGGGATACTGC+TGG | - | chr3.1:85222067-85222086 | MS.gene32605:intron | 50.0% | |
! | GTCATCAGGAAGGGGTTGAT+TGG | + | chr3.1:85223975-85223994 | None:intergenic | 50.0% |
! | TGGTGTGGAAGTGCATCCAT+TGG | - | chr3.1:85222015-85222034 | MS.gene32605:intron | 50.0% |
AAGCTTGTCATCGTCGGCGA+TGG | - | chr3.1:85221656-85221675 | MS.gene32605:intron | 55.0% | |
ACCCTGCAAGCTTCCTAGCA+AGG | + | chr3.1:85223183-85223202 | None:intergenic | 55.0% | |
ACTTCTGGTGGAGCCAATGC+AGG | + | chr3.1:85223330-85223349 | None:intergenic | 55.0% | |
CAGGCAAGTGAAGGCAAAGC+AGG | - | chr3.1:85223075-85223094 | MS.gene32605:intron | 55.0% | |
CCTGGCACCGTGATCTTTGT+CGG | - | chr3.1:85222889-85222908 | MS.gene32605:intron | 55.0% | |
GGCGGATAAAAGGAAGGGAC+AGG | + | chr3.1:85223772-85223791 | None:intergenic | 55.0% | |
TGCTAGGAAGCTTGCAGGGT+AGG | - | chr3.1:85223183-85223202 | MS.gene32605:intron | 55.0% | |
! | CAAAGATCACGGTGCCAGGT+AGG | + | chr3.1:85222888-85222907 | None:intergenic | 55.0% |
! | GAAGGGGTTGATTGGCAGCT+TGG | + | chr3.1:85223967-85223986 | None:intergenic | 55.0% |
CCGACAAAGATCACGGTGCC+AGG | + | chr3.1:85222892-85222911 | None:intergenic | 60.0% | |
CTTGTCATCGTCGGCGATGG+CGG | - | chr3.1:85221659-85221678 | MS.gene32605:intron | 60.0% | |
! | ATCGTCGGCGATGGCGGCAC+TGG | - | chr3.1:85221665-85221684 | MS.gene32605:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 85221525 | 85224015 | 85221525 | ID=MS.gene32605 |
chr3.1 | mRNA | 85221525 | 85224015 | 85221525 | ID=MS.gene32605.t1;Parent=MS.gene32605 |
chr3.1 | exon | 85224013 | 85224015 | 85224013 | ID=MS.gene32605.t1.exon1;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85224013 | 85224015 | 85224013 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85223854 | 85223923 | 85223854 | ID=MS.gene32605.t1.exon2;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85223854 | 85223923 | 85223854 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85223646 | 85223702 | 85223646 | ID=MS.gene32605.t1.exon3;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85223646 | 85223702 | 85223646 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85223415 | 85223532 | 85223415 | ID=MS.gene32605.t1.exon4;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85223415 | 85223532 | 85223415 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85222630 | 85222719 | 85222630 | ID=MS.gene32605.t1.exon5;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85222630 | 85222719 | 85222630 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85222340 | 85222519 | 85222340 | ID=MS.gene32605.t1.exon6;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85222340 | 85222519 | 85222340 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85222164 | 85222241 | 85222164 | ID=MS.gene32605.t1.exon7;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85222164 | 85222241 | 85222164 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
chr3.1 | exon | 85221525 | 85221594 | 85221525 | ID=MS.gene32605.t1.exon8;Parent=MS.gene32605.t1 |
chr3.1 | CDS | 85221525 | 85221594 | 85221525 | ID=cds.MS.gene32605.t1;Parent=MS.gene32605.t1 |
Gene Sequence |
Protein sequence |