AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037695

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037695.t1 MTR_4g019880 98.077 364 7 0 1 364 7 370 0.0 737
MS.gene037695.t1 MTR_7g116500 76.177 361 84 1 4 364 11 369 0.0 580
MS.gene037695.t1 MTR_7g116520 70.137 365 102 2 3 362 6 368 0.0 524
MS.gene037695.t1 MTR_7g116510 68.524 359 109 3 7 364 7 362 0.0 513
MS.gene037695.t1 MTR_1g024890 69.706 340 101 1 25 364 31 368 0.0 511
MS.gene037695.t1 MTR_6g021530 67.867 361 111 3 7 364 8 366 1.04e-180 505
MS.gene037695.t1 MTR_7g116570 65.854 369 115 3 5 364 4 370 1.12e-178 500
MS.gene037695.t1 MTR_1g079540 65.027 366 119 3 6 364 4 367 7.23e-177 496
MS.gene037695.t1 MTR_1g069175 61.773 361 134 3 4 362 11 369 2.28e-166 469
MS.gene037695.t1 MTR_7g008060 62.500 360 118 3 7 364 12 356 5.44e-164 462
MS.gene037695.t1 MTR_1g079530 63.085 363 121 4 3 362 5 357 1.76e-162 459
MS.gene037695.t1 MTR_1g079590 62.000 200 70 1 7 200 6 205 6.14e-84 254
MS.gene037695.t1 MTR_5g078210 38.889 342 201 7 4 343 3 338 1.15e-78 245
MS.gene037695.t1 MTR_8g079050 36.512 367 219 9 2 357 10 373 9.29e-74 233
MS.gene037695.t1 MTR_4g122200 37.571 354 213 6 7 357 17 365 1.36e-73 233
MS.gene037695.t1 MTR_2g033930 36.639 363 219 7 1 358 5 361 4.79e-73 231
MS.gene037695.t1 MTR_3g098270 37.092 337 197 6 26 354 34 363 6.16e-70 224
MS.gene037695.t1 MTR_4g035353 32.687 361 237 4 1 360 8 363 2.47e-69 222
MS.gene037695.t1 MTR_8g087890 36.134 357 219 7 8 360 12 363 4.41e-69 221
MS.gene037695.t1 MTR_2g033920 36.283 339 209 5 23 358 32 366 9.25e-69 220
MS.gene037695.t1 MTR_3g005650 35.028 354 223 6 4 357 8 354 2.14e-68 219
MS.gene037695.t1 MTR_5g084790 35.522 335 204 8 9 337 13 341 1.30e-67 217
MS.gene037695.t1 MTR_3g024510 37.572 346 202 8 1 337 6 346 1.36e-67 218
MS.gene037695.t1 MTR_5g084750 35.503 338 201 7 9 334 4 336 7.41e-67 215
MS.gene037695.t1 MTR_0565s0010 37.389 337 196 8 7 337 14 341 3.94e-66 213
MS.gene037695.t1 MTR_3g435540 36.593 317 195 5 28 342 25 337 6.54e-66 213
MS.gene037695.t1 MTR_3g464730 36.471 340 208 7 1 337 4 338 6.86e-66 213
MS.gene037695.t1 MTR_3g082830 35.802 324 200 6 19 339 31 349 8.58e-66 213
MS.gene037695.t1 MTR_8g074570 34.877 367 214 9 6 357 13 369 2.06e-65 212
MS.gene037695.t1 MTR_5g093090 35.380 342 205 6 26 359 28 361 3.03e-65 211
MS.gene037695.t1 MTR_4g108690 37.224 317 193 5 28 342 29 341 5.18e-64 208
MS.gene037695.t1 MTR_5g084770 36.709 316 191 6 26 337 28 338 6.89e-64 207
MS.gene037695.t1 MTR_3g052490 33.978 362 224 8 7 360 12 366 7.05e-63 205
MS.gene037695.t1 MTR_3g052480 34.795 365 218 8 7 360 13 368 7.60e-63 205
MS.gene037695.t1 MTR_1g025760 34.375 352 210 7 1 338 46 390 9.98e-63 206
MS.gene037695.t1 MTR_5g009100 33.934 333 215 4 28 358 48 377 1.28e-61 202
MS.gene037695.t1 MTR_5g074270 34.161 322 201 7 26 342 33 348 2.13e-61 201
MS.gene037695.t1 MTR_1g025780 35.110 319 199 6 26 342 41 353 4.16e-61 200
MS.gene037695.t1 MTR_8g075230 34.286 350 207 8 9 340 8 352 1.73e-60 199
MS.gene037695.t1 MTR_3g005660 33.875 369 222 10 8 360 8 370 7.87e-59 195
MS.gene037695.t1 MTR_5g022640 35.127 316 196 7 26 337 43 353 8.87e-59 194
MS.gene037695.t1 MTR_3g052580 32.787 366 230 8 1 358 2 359 1.03e-58 195
MS.gene037695.t1 MTR_2g044100 33.425 365 217 9 12 361 25 378 1.42e-58 195
MS.gene037695.t1 MTR_3g052580 32.787 366 230 8 1 358 1 358 1.84e-58 195
MS.gene037695.t1 MTR_2g100620 34.472 322 200 7 26 342 31 346 3.72e-58 192
MS.gene037695.t1 MTR_1g025700 35.736 333 196 7 26 352 50 370 4.54e-58 192
MS.gene037695.t1 MTR_3g023220 35.224 335 199 9 26 358 33 351 2.66e-57 190
MS.gene037695.t1 MTR_8g075220 34.043 329 206 7 26 347 40 364 8.07e-57 189
MS.gene037695.t1 MTR_5g078210 37.282 287 173 6 4 288 3 284 8.38e-57 188
MS.gene037695.t1 MTR_8g014910 34.111 343 213 9 7 342 11 347 1.10e-56 189
MS.gene037695.t1 MTR_1g025680 35.227 352 215 8 7 350 11 357 1.68e-56 191
MS.gene037695.t1 MTR_4g087985 31.268 355 224 7 7 344 15 366 3.24e-56 188
MS.gene037695.t1 MTR_5g022630 35.331 317 195 8 26 337 43 354 4.48e-56 187
MS.gene037695.t1 MTR_2g084585 34.320 338 214 6 8 342 12 344 6.08e-56 187
MS.gene037695.t1 MTR_3g114120 33.438 320 196 6 26 338 47 356 9.50e-56 187
MS.gene037695.t1 MTR_1g025720 34.286 315 200 5 26 338 37 346 1.17e-55 186
MS.gene037695.t1 MTR_8g075200 32.923 325 210 6 26 347 41 360 2.63e-55 186
MS.gene037695.t1 MTR_1g079570 54.861 144 63 1 221 364 4 145 9.95e-55 177
MS.gene037695.t1 MTR_4g056160 33.951 324 201 7 26 342 27 344 2.27e-53 180
MS.gene037695.t1 MTR_4g056280 33.537 328 210 6 26 350 30 352 4.36e-53 179
MS.gene037695.t1 MTR_3g114090 32.424 330 212 7 26 352 36 357 9.06e-53 179
MS.gene037695.t1 MTR_2g015080 31.487 343 222 6 1 333 13 352 3.63e-52 177
MS.gene037695.t1 MTR_8g031400 33.043 345 207 8 23 358 34 363 1.27e-50 173
MS.gene037695.t1 MTR_2g017875 32.544 338 209 7 26 361 34 354 1.43e-50 173
MS.gene037695.t1 MTR_2g017925 32.153 339 212 8 26 361 33 356 2.30e-50 172
MS.gene037695.t1 MTR_8g087870 31.395 344 220 7 19 360 22 351 2.48e-50 172
MS.gene037695.t1 MTR_8g031390 32.571 350 211 9 23 363 34 367 3.29e-50 172
MS.gene037695.t1 MTR_1g025910 33.043 345 200 8 31 357 41 372 2.10e-49 170
MS.gene037695.t1 MTR_2g033920 36.567 268 164 4 23 288 32 295 2.98e-49 168
MS.gene037695.t1 MTR_8g074560 31.421 366 229 11 7 358 9 366 4.84e-49 169
MS.gene037695.t1 MTR_8g031420 31.594 345 212 8 23 358 32 361 2.42e-48 167
MS.gene037695.t1 MTR_8g031430 31.793 368 218 11 7 358 13 363 1.88e-47 165
MS.gene037695.t1 MTR_2g017955 30.027 373 241 9 1 363 1 363 2.52e-47 165
MS.gene037695.t1 MTR_2g017965 30.376 372 223 9 7 361 10 362 4.86e-47 164
MS.gene037695.t1 MTR_8g074580 30.000 390 206 8 24 359 42 418 1.52e-45 161
MS.gene037695.t1 MTR_5g083040 29.268 328 219 5 26 345 32 354 7.89e-45 158
MS.gene037695.t1 MTR_8g022810 28.650 363 228 10 2 345 9 359 1.81e-44 157
MS.gene037695.t1 MTR_2g017915 30.925 346 187 9 28 361 35 340 1.18e-41 149
MS.gene037695.t1 MTR_8g031390 33.448 290 173 8 23 308 34 307 5.14e-41 147
MS.gene037695.t1 MTR_8g022790 28.533 368 237 10 1 360 12 361 1.10e-40 147
MS.gene037695.t1 MTR_0009s0250 28.818 347 223 11 7 346 11 340 2.95e-38 140
MS.gene037695.t1 MTR_2g461580 26.901 342 223 9 26 361 31 351 1.02e-36 136
MS.gene037695.t1 MTR_5g093090 32.103 271 168 6 26 288 28 290 4.49e-36 133
MS.gene037695.t1 MTR_3g021460 26.113 337 226 9 26 358 31 348 1.54e-35 133
MS.gene037695.t1 MTR_8g089805 27.926 376 221 15 3 344 15 374 2.03e-32 125
MS.gene037695.t1 MTR_1g030268 27.989 368 216 14 7 344 21 369 1.82e-30 120
MS.gene037695.t1 MTR_7g087190 26.722 363 213 14 18 345 35 379 1.94e-30 120
MS.gene037695.t1 MTR_1g030275 28.883 367 215 16 7 344 19 368 4.00e-30 119
MS.gene037695.t1 MTR_7g111780 28.614 339 207 13 28 351 38 356 3.25e-29 116
MS.gene037695.t1 MTR_8g022810 29.688 256 149 8 2 236 9 254 3.87e-28 112
MS.gene037695.t1 MTR_2g017925 29.339 242 155 6 123 361 25 253 4.60e-28 110
MS.gene037695.t1 MTR_2g018015 32.751 229 150 3 19 244 29 256 1.64e-27 110
MS.gene037695.t1 MTR_2g015580 30.499 341 203 13 26 344 47 375 1.72e-27 112
MS.gene037695.t1 MTR_5g087690 25.723 346 225 10 26 358 50 376 2.07e-27 111
MS.gene037695.t1 MTR_8g089805 27.491 291 171 11 86 344 24 306 2.04e-26 107
MS.gene037695.t1 MTR_5g093090 39.189 148 83 2 26 166 28 175 5.36e-26 103
MS.gene037695.t1 MTR_0127s0040 25.105 239 173 4 124 360 4 238 9.04e-26 103
MS.gene037695.t1 MTR_2g015630 29.086 361 222 14 7 344 12 361 9.24e-26 107
MS.gene037695.t1 MTR_7g116870 28.307 378 217 18 1 345 7 363 1.10e-25 106
MS.gene037695.t1 MTR_1g030340 28.338 367 204 16 26 355 42 386 1.66e-25 106
MS.gene037695.t1 MTR_2g015590 29.825 342 205 13 26 344 31 360 2.58e-25 105
MS.gene037695.t1 MTR_1g030230 26.357 387 232 16 1 353 6 373 1.09e-24 103
MS.gene037695.t1 MTR_7g113860 26.836 354 213 11 21 344 24 361 1.62e-24 103
MS.gene037695.t1 MTR_1g030220 28.090 356 197 15 25 344 39 371 1.69e-24 103
MS.gene037695.t1 MTR_6g081170 60.465 86 31 1 34 119 1 83 5.43e-24 95.1
MS.gene037695.t1 MTR_1108s0010 27.679 224 145 5 129 350 3 211 6.03e-24 98.6
MS.gene037695.t1 MTR_4g036375 32.597 181 120 2 2 181 6 185 6.70e-24 97.8
MS.gene037695.t1 MTR_7g033165 27.762 353 203 15 26 345 33 366 3.63e-23 99.8
MS.gene037695.t1 MTR_7g111780 28.205 273 165 10 94 351 1 257 1.42e-22 95.9
MS.gene037695.t1 MTR_2g043980 27.913 369 212 14 1 344 7 346 1.51e-22 97.8
MS.gene037695.t1 MTR_5g016030 61.644 73 26 1 237 309 1 71 1.55e-22 90.5
MS.gene037695.t1 MTR_8g038680 27.273 374 229 13 1 345 1 360 1.81e-22 97.8
MS.gene037695.t1 MTR_3g463960 25.770 357 230 13 11 344 29 373 3.32e-22 97.1
MS.gene037695.t1 MTR_3g463950 25.770 357 230 13 11 344 29 373 3.32e-22 97.1
MS.gene037695.t1 MTR_3g463970 25.770 357 230 13 11 344 29 373 3.32e-22 97.1
MS.gene037695.t1 MTR_3g463940 25.770 357 230 13 11 344 29 373 3.32e-22 97.1
MS.gene037695.t1 MTR_2g015650 29.915 351 192 17 26 344 31 359 1.50e-21 95.1
MS.gene037695.t1 MTR_7g033150 22.835 381 236 13 3 345 12 372 1.61e-21 95.1
MS.gene037695.t1 MTR_8g028160 25.000 368 229 14 10 345 18 370 5.73e-21 93.6
MS.gene037695.t1 MTR_6g007100 26.629 353 220 12 10 345 19 349 6.59e-21 93.2
MS.gene037695.t1 MTR_1g082390 25.956 366 225 13 7 343 13 361 6.63e-21 93.2
MS.gene037695.t1 MTR_6g007090 26.997 363 223 13 8 345 21 366 1.20e-20 92.4
MS.gene037695.t1 MTR_1g030265 29.043 303 165 12 87 353 58 346 4.60e-20 90.5
MS.gene037695.t1 MTR_7g104220 24.924 329 208 12 26 341 42 344 7.06e-20 90.1
MS.gene037695.t1 MTR_1g060490 25.926 324 194 15 24 331 35 328 9.92e-20 89.4
MS.gene037695.t1 MTR_1g030268 26.821 302 182 12 7 288 21 303 1.18e-19 89.0
MS.gene037695.t1 MTR_6g007095 26.645 304 188 10 64 351 404 688 2.00e-19 90.1
MS.gene037695.t1 MTR_6g007095 26.801 347 208 14 26 345 41 368 5.70e-19 89.0
MS.gene037695.t1 MTR_7g113860 25.000 372 232 13 3 344 13 367 2.90e-19 88.6
MS.gene037695.t1 MTR_4g104240 25.723 346 222 13 25 351 38 367 4.50e-19 87.8
MS.gene037695.t1 MTR_3g463930 25.852 352 215 14 25 344 43 380 4.96e-19 87.8
MS.gene037695.t1 MTR_5g074210 30.496 141 94 2 199 337 62 200 5.04e-19 85.1
MS.gene037695.t1 MTR_7g113860 26.389 288 173 9 87 344 15 293 9.61e-19 86.3
MS.gene037695.t1 MTR_7g033155 23.733 375 217 14 20 345 32 386 1.90e-18 86.3
MS.gene037695.t1 MTR_2g079090 25.620 363 226 13 6 344 2 344 1.91e-18 85.9
MS.gene037695.t1 MTR_2g087292 24.629 337 163 8 8 336 8 261 2.39e-18 84.3
MS.gene037695.t1 MTR_6g049220 51.685 89 42 1 26 113 30 118 2.69e-18 82.0
MS.gene037695.t1 MTR_1g092750 26.332 319 194 12 27 331 41 332 4.19e-18 84.7
MS.gene037695.t1 MTR_1g060500 24.316 329 201 12 24 331 38 339 5.77e-18 84.3
MS.gene037695.t1 MTR_2g079080 25.620 363 226 13 6 344 2 344 6.05e-18 84.3
MS.gene037695.t1 MTR_0029s0050 26.462 359 216 14 12 344 8 344 1.51e-17 83.2
MS.gene037695.t1 MTR_0029s0100 26.462 359 216 14 12 344 8 344 2.26e-17 82.8
MS.gene037695.t1 MTR_1g092690 26.687 326 184 16 26 331 51 341 2.62e-17 82.8
MS.gene037695.t1 MTR_1g092760 26.488 336 193 12 16 331 29 330 3.99e-17 82.0
MS.gene037695.t1 MTR_3g438030 26.377 345 220 15 25 348 29 360 6.69e-17 81.6
MS.gene037695.t1 MTR_7g033165 28.169 284 167 13 26 288 33 300 3.29e-15 75.9
MS.gene037695.t1 MTR_2g017895 25.856 263 148 6 96 347 26 252 1.29e-13 70.5
MS.gene037695.t1 MTR_8g012540 25.526 333 213 11 1 312 1 319 2.20e-12 67.8
MS.gene037695.t1 MTR_3g011860 34.524 84 53 1 235 318 241 322 8.58e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037695.t1 AT5G33370 70.506 356 103 1 9 364 13 366 0.0 540
MS.gene037695.t1 AT3G04290 72.807 342 91 1 21 362 24 363 0.0 524
MS.gene037695.t1 AT5G18430 67.507 357 109 4 6 360 11 362 2.84e-172 484
MS.gene037695.t1 AT4G28780 63.760 367 120 4 6 362 2 365 1.58e-166 469
MS.gene037695.t1 AT5G33370 70.357 280 81 1 9 288 13 290 1.99e-144 412
MS.gene037695.t1 AT2G23540 37.427 342 205 7 26 360 48 387 1.51e-77 244
MS.gene037695.t1 AT3G50400 39.368 348 198 11 16 354 25 368 1.38e-76 241
MS.gene037695.t1 AT2G42990 37.249 349 210 7 5 350 8 350 3.33e-74 234
MS.gene037695.t1 AT4G18970 39.474 342 196 7 24 360 26 361 6.19e-74 233
MS.gene037695.t1 AT4G18970 39.474 342 196 7 24 360 26 361 3.25e-73 233
MS.gene037695.t1 AT5G15720 37.101 345 209 5 20 360 24 364 5.33e-73 231
MS.gene037695.t1 AT5G37690 39.617 313 183 5 28 339 29 336 5.48e-73 231
MS.gene037695.t1 AT5G45670 35.714 364 225 7 1 360 4 362 2.18e-72 229
MS.gene037695.t1 AT1G29660 37.685 337 202 6 27 360 33 364 8.92e-71 225
MS.gene037695.t1 AT1G71250 34.734 357 222 5 9 357 17 370 3.28e-70 224
MS.gene037695.t1 AT5G08460 36.716 335 208 4 26 357 49 382 6.41e-70 224
MS.gene037695.t1 AT1G29670 35.734 361 219 6 8 360 8 363 1.03e-69 223
MS.gene037695.t1 AT1G29670 35.734 361 219 6 8 360 76 431 4.44e-69 223
MS.gene037695.t1 AT1G71691 38.279 337 200 7 26 361 55 384 2.61e-68 220
MS.gene037695.t1 AT4G26790 35.938 320 197 6 26 342 29 343 8.81e-68 217
MS.gene037695.t1 AT4G26790 35.938 320 197 6 26 342 29 343 8.81e-68 217
MS.gene037695.t1 AT5G37690 38.339 313 179 6 28 339 29 328 1.93e-67 216
MS.gene037695.t1 AT1G75880 36.250 320 197 5 26 342 52 367 4.46e-67 216
MS.gene037695.t1 AT1G75880 36.250 320 196 6 26 342 52 366 4.17e-66 214
MS.gene037695.t1 AT1G33811 36.467 351 211 9 14 357 22 367 2.68e-65 211
MS.gene037695.t1 AT2G30310 35.783 313 191 7 26 333 34 341 1.52e-64 209
MS.gene037695.t1 AT2G04570 35.604 323 200 6 26 345 28 345 2.65e-64 208
MS.gene037695.t1 AT2G30220 36.278 317 192 7 26 337 33 344 3.20e-64 208
MS.gene037695.t1 AT1G75890 35.913 323 194 8 26 342 47 362 3.25e-64 209
MS.gene037695.t1 AT1G74460 36.308 325 200 6 28 350 25 344 9.88e-64 207
MS.gene037695.t1 AT1G75890 35.913 323 194 8 26 342 76 391 1.03e-63 208
MS.gene037695.t1 AT1G58430 36.452 310 189 6 26 331 35 340 2.70e-63 206
MS.gene037695.t1 AT5G42170 35.110 319 196 6 27 342 51 361 4.98e-62 203
MS.gene037695.t1 AT1G06990 34.295 312 196 6 26 333 37 343 6.47e-62 202
MS.gene037695.t1 AT2G31540 36.278 317 192 7 26 337 35 346 6.61e-62 202
MS.gene037695.t1 AT5G03820 36.158 354 200 8 6 342 5 349 3.03e-61 201
MS.gene037695.t1 AT5G41890 32.065 368 225 9 8 357 12 372 3.06e-61 201
MS.gene037695.t1 AT1G75890 34.627 335 195 9 26 342 47 375 3.90e-61 201
MS.gene037695.t1 AT2G24560 35.144 313 189 7 26 331 34 339 8.01e-61 200
MS.gene037695.t1 AT5G03820 36.158 354 200 8 6 342 33 377 1.05e-60 200
MS.gene037695.t1 AT1G75900 34.385 317 197 7 26 338 43 352 2.96e-60 198
MS.gene037695.t1 AT5G03810 36.932 352 203 8 1 342 3 345 4.93e-60 197
MS.gene037695.t1 AT1G20120 33.851 322 201 7 26 342 78 392 7.88e-60 198
MS.gene037695.t1 AT4G10950 34.030 335 216 4 26 358 71 402 1.92e-59 197
MS.gene037695.t1 AT3G16370 36.909 317 191 7 26 338 30 341 2.78e-59 195
MS.gene037695.t1 AT5G45950 33.033 333 211 7 19 347 29 353 4.44e-59 195
MS.gene037695.t1 AT1G59406 35.202 321 195 6 26 342 30 341 6.39e-59 194
MS.gene037695.t1 AT1G59030 35.202 321 195 6 26 342 30 341 6.39e-59 194
MS.gene037695.t1 AT1G58725 35.202 321 195 6 26 342 30 341 6.39e-59 194
MS.gene037695.t1 AT1G20130 33.033 333 200 8 26 342 184 509 9.60e-58 196
MS.gene037695.t1 AT1G20130 33.033 333 200 8 26 342 204 529 1.35e-57 196
MS.gene037695.t1 AT5G22810 36.615 325 191 9 26 342 34 351 1.72e-57 191
MS.gene037695.t1 AT5G45960 32.907 313 202 4 26 333 47 356 3.29e-57 191
MS.gene037695.t1 AT1G20132 35.238 315 196 6 26 337 61 370 4.92e-57 191
MS.gene037695.t1 AT4G10950 34.226 336 210 6 26 358 71 398 9.87e-57 190
MS.gene037695.t1 AT3G53100 36.760 321 193 7 26 342 29 343 3.38e-56 187
MS.gene037695.t1 AT1G58520 34.579 321 190 7 26 342 30 334 9.27e-55 183
MS.gene037695.t1 AT1G58525 34.579 321 190 7 26 342 30 334 9.27e-55 183
MS.gene037695.t1 AT5G63170 35.045 331 194 9 6 333 9 321 1.16e-54 183
MS.gene037695.t1 AT5G55050 33.431 341 214 7 27 359 40 375 3.51e-54 183
MS.gene037695.t1 AT2G19060 32.857 350 207 11 6 344 4 336 1.28e-53 181
MS.gene037695.t1 AT5G15720 34.296 277 176 4 88 360 59 333 2.97e-53 179
MS.gene037695.t1 AT2G19010 33.048 351 211 10 11 357 15 345 4.07e-53 179
MS.gene037695.t1 AT5G40990 31.481 378 231 11 3 361 6 374 4.39e-53 180
MS.gene037695.t1 AT3G43570 33.229 319 175 6 26 342 30 312 5.68e-53 178
MS.gene037695.t1 AT2G19010 33.048 351 211 10 11 357 45 375 5.86e-53 180
MS.gene037695.t1 AT4G16230 44.105 229 114 5 7 225 5 229 1.70e-52 174
MS.gene037695.t1 AT1G73610 34.688 320 188 8 26 342 35 336 4.75e-52 176
MS.gene037695.t1 AT2G40250 31.875 320 204 5 26 337 36 349 7.27e-52 176
MS.gene037695.t1 AT5G15720 37.545 277 165 5 20 292 24 296 3.06e-51 173
MS.gene037695.t1 AT1G20135 31.343 335 207 9 11 338 9 327 6.71e-51 173
MS.gene037695.t1 AT2G19050 33.036 336 199 8 27 357 32 346 1.27e-50 173
MS.gene037695.t1 AT1G71691 34.843 287 180 6 76 361 3 283 3.02e-50 170
MS.gene037695.t1 AT3G14820 30.571 350 225 9 8 350 12 350 2.00e-49 170
MS.gene037695.t1 AT4G30140 33.634 333 201 8 27 358 34 347 3.06e-49 169
MS.gene037695.t1 AT2G24560 33.803 284 174 7 26 302 34 310 3.02e-48 166
MS.gene037695.t1 AT1G53940 31.534 352 211 13 26 361 39 376 7.03e-48 166
MS.gene037695.t1 AT1G23500 31.707 328 202 8 21 344 30 339 2.09e-46 162
MS.gene037695.t1 AT1G71120 33.235 340 204 13 26 357 31 355 4.37e-46 161
MS.gene037695.t1 AT3G14225 30.484 351 218 10 26 360 37 377 5.47e-46 161
MS.gene037695.t1 AT3G14225 30.659 349 216 10 26 360 37 373 1.13e-45 160
MS.gene037695.t1 AT1G71691 39.015 264 153 7 26 288 55 311 1.58e-45 158
MS.gene037695.t1 AT1G75910 30.938 320 206 6 26 342 28 335 1.15e-44 157
MS.gene037695.t1 AT1G75920 29.683 347 214 8 9 342 6 335 1.18e-44 157
MS.gene037695.t1 AT1G75930 32.492 317 194 8 26 337 29 330 1.68e-44 156
MS.gene037695.t1 AT1G53990 29.521 376 224 13 7 360 8 364 4.11e-43 153
MS.gene037695.t1 AT3G43550 33.456 272 169 5 20 288 24 286 2.22e-42 149
MS.gene037695.t1 AT1G75920 28.453 362 214 9 9 342 1 345 8.82e-41 147
MS.gene037695.t1 AT2G19050 34.568 243 151 3 27 269 32 266 8.77e-40 142
MS.gene037695.t1 AT2G03980 30.818 318 202 8 26 336 43 349 5.67e-38 140
MS.gene037695.t1 AT2G03980 30.818 318 202 8 26 336 43 349 5.67e-38 140
MS.gene037695.t1 AT2G03980 30.818 318 202 8 26 336 43 349 5.67e-38 140
MS.gene037695.t1 AT2G03980 30.818 318 202 8 26 336 43 349 5.67e-38 140
MS.gene037695.t1 AT1G53920 28.940 349 222 12 26 360 48 384 1.58e-36 136
MS.gene037695.t1 AT2G31550 32.701 211 135 4 133 340 2 208 6.40e-36 130
MS.gene037695.t1 AT1G75920 28.655 342 193 8 9 342 6 304 7.51e-36 133
MS.gene037695.t1 AT1G75920 27.852 298 191 7 52 342 27 307 6.10e-34 128
MS.gene037695.t1 AT1G56670 28.142 366 215 12 6 343 12 357 1.03e-31 123
MS.gene037695.t1 AT1G54030 29.619 341 209 14 24 360 50 363 8.65e-31 121
MS.gene037695.t1 AT1G09390 29.086 361 214 12 8 343 11 354 2.51e-29 116
MS.gene037695.t1 AT1G53940 30.797 276 167 12 26 291 39 300 4.80e-29 114
MS.gene037695.t1 AT3G62280 28.363 342 205 13 30 353 40 359 4.82e-27 110
MS.gene037695.t1 AT5G45910 30.423 355 199 17 22 344 26 364 5.77e-27 110
MS.gene037695.t1 AT5G14450 27.273 374 224 14 3 344 16 373 1.51e-26 109
MS.gene037695.t1 AT4G01130 26.790 377 221 15 7 348 15 371 7.16e-25 104
MS.gene037695.t1 AT1G54790 27.807 374 217 14 6 344 9 364 1.36e-24 103
MS.gene037695.t1 AT3G26430 28.895 353 199 15 26 344 31 365 1.37e-24 103
MS.gene037695.t1 AT3G14220 25.069 363 243 12 7 359 9 352 8.42e-24 101
MS.gene037695.t1 AT3G09930 28.060 335 200 14 19 337 32 341 1.06e-23 100
MS.gene037695.t1 AT3G09930 28.060 335 200 14 19 337 32 341 1.06e-23 100
MS.gene037695.t1 AT3G27950 27.457 346 206 10 26 345 32 358 1.19e-23 100
MS.gene037695.t1 AT3G05180 27.794 349 206 13 26 344 36 368 2.61e-23 100
MS.gene037695.t1 AT4G16233 36.000 125 77 2 234 357 5 127 3.26e-23 94.4
MS.gene037695.t1 AT1G54790 27.557 352 199 15 28 344 33 363 4.90e-23 99.4
MS.gene037695.t1 AT1G31550 29.275 386 222 19 6 360 14 379 2.48e-22 97.4
MS.gene037695.t1 AT1G67830 26.944 360 215 15 19 346 23 366 4.18e-22 96.7
MS.gene037695.t1 AT2G04020 32.673 202 123 4 26 223 43 235 8.63e-22 94.0
MS.gene037695.t1 AT2G04020 32.558 215 129 5 26 233 43 248 9.19e-22 94.7
MS.gene037695.t1 AT1G54000 25.613 367 231 14 9 357 12 354 1.01e-21 95.9
MS.gene037695.t1 AT1G54010 26.016 369 229 15 9 358 12 355 2.48e-21 94.7
MS.gene037695.t1 AT1G28670 28.883 367 222 15 6 344 10 365 4.29e-21 94.0
MS.gene037695.t1 AT1G56670 27.451 306 179 11 6 288 12 297 8.78e-21 91.7
MS.gene037695.t1 AT5G03610 25.776 322 205 12 28 337 45 344 1.39e-20 92.0
MS.gene037695.t1 AT1G28570 28.371 356 219 18 25 357 33 375 1.42e-20 92.4
MS.gene037695.t1 AT4G16220 47.321 112 56 2 7 117 11 120 2.81e-20 89.4
MS.gene037695.t1 AT1G28660 29.730 370 214 16 6 344 10 364 4.57e-20 90.9
MS.gene037695.t1 AT1G54020 25.000 348 235 11 15 358 22 347 5.15e-20 90.5
MS.gene037695.t1 AT1G28650 28.415 366 220 16 8 344 14 366 1.49e-19 89.4
MS.gene037695.t1 AT1G28640 28.686 373 216 19 6 345 10 365 1.95e-19 89.4
MS.gene037695.t1 AT3G14210 26.801 347 215 12 26 358 36 357 1.98e-19 89.4
MS.gene037695.t1 AT1G54030 28.629 248 152 9 24 268 50 275 3.44e-19 87.4
MS.gene037695.t1 AT4G01130 26.599 297 171 11 87 348 1 285 9.35e-19 85.9
MS.gene037695.t1 AT3G48460 25.872 344 210 14 28 345 40 364 1.16e-18 86.7
MS.gene037695.t1 AT1G54790 25.661 378 199 16 28 344 33 389 5.14e-18 85.1
MS.gene037695.t1 AT1G28590 25.956 366 239 15 1 344 10 365 4.50e-16 79.3
MS.gene037695.t1 AT4G01130 26.645 304 181 13 7 288 15 298 6.84e-16 78.2
MS.gene037695.t1 AT3G62280 28.195 266 158 10 30 280 40 287 1.61e-15 76.6
MS.gene037695.t1 AT2G36325 25.278 360 215 14 3 337 16 346 1.81e-12 68.2

Find 81 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGGATCTTTATGCATTT+TGG 0.100711 4.3:+78852934 MS.gene037695:CDS
CATTCCCACCTAAAGTTATT+AGG 0.124247 4.3:-78849667 None:intergenic
CTTCTAACTTGTGCCCTAAT+AGG 0.217615 4.3:+78852916 MS.gene037695:CDS
AATGCATAAAGATCCCTATT+AGG 0.244612 4.3:-78852930 None:intergenic
AATCAACTCAATGCTGAAAT+TGG 0.265479 4.3:+78851352 MS.gene037695:CDS
ATAAGTGTACTAAGATTATA+TGG 0.279256 4.3:-78853035 None:intergenic
TTTATCAACGATTAGTCTAT+TGG 0.279659 4.3:-78852982 None:intergenic
ACTGTTTAAAGTATGCTAAT+TGG 0.292401 4.3:-78849577 None:intergenic
CATACAGAATCTATATGAAT+TGG 0.299167 4.3:+78851186 MS.gene037695:intron
CGTGCTGATTCATATCCTTA+TGG 0.309899 4.3:+78848219 MS.gene037695:CDS
GATGGTGAAAGGTTGCTTAA+TGG 0.313083 4.3:+78848493 MS.gene037695:CDS
TCTCAAACTCATAGAGCTTC+TGG 0.319164 4.3:+78848249 MS.gene037695:CDS
TCAAGCTCTGGACTCAAATA+TGG 0.322479 4.3:-78848472 None:intergenic
ATTCCCACCTAAAGTTATTA+GGG 0.330551 4.3:-78849666 None:intergenic
CAAAGGGTTAGTGCACTAAT+TGG 0.330824 4.3:+78849605 MS.gene037695:CDS
TGAGTATCGCAAAATTCTTA+TGG 0.332687 4.3:+78849775 MS.gene037695:CDS
ATTGGGAGCAAGAAGAGTTT+TGG 0.351874 4.3:+78851204 MS.gene037695:CDS
GCATTAACCCTAATAACTTT+AGG 0.353703 4.3:+78849659 MS.gene037695:CDS
TTCTAACTTGTGCCCTAATA+GGG 0.362728 4.3:+78852917 MS.gene037695:CDS
CTGTTTAAAGTATGCTAATT+GGG 0.373885 4.3:-78849576 None:intergenic
GTGACAGGAACGGGACCATT+AGG 0.381376 4.3:+78851226 MS.gene037695:CDS
ATGCATAAAGATCCCTATTA+GGG 0.388461 4.3:-78852929 None:intergenic
TTAGTGCACTAACCCTTTGC+TGG 0.395839 4.3:-78849601 None:intergenic
AGGTTGTGTGCCAGCAGAAT+TGG 0.398301 4.3:+78851246 MS.gene037695:CDS
AAATGCATTTGCTATGCATT+TGG 0.399484 4.3:+78851402 MS.gene037695:CDS
GCATAGATGAACACATGATT+AGG 0.400926 4.3:-78851379 None:intergenic
AAATGAGCACTCAACTAATA+AGG 0.407140 4.3:-78848302 None:intergenic
ATGCTAATTGGGCAGTAATT+CGG 0.407503 4.3:-78849565 None:intergenic
TTGGCTATGCAAGGAAGAAA+TGG 0.409678 4.3:+78851265 MS.gene037695:CDS
ATGAGGAAGACAACATAATC+AGG 0.437834 4.3:-78849749 None:intergenic
AGTCTATTGGCTCTTTCTGA+TGG 0.442836 4.3:-78852969 None:intergenic
GCTCTTTCTGATGGATGAAA+GGG 0.446836 4.3:-78852960 None:intergenic
TCTTAGTACACTTATTGCTA+TGG 0.450346 4.3:+78853043 MS.gene037695:CDS
TCTGCTGGCACACAACCTAA+TGG 0.453033 4.3:-78851241 None:intergenic
ATTATATGGGTGCATGTAAT+CGG 0.455255 4.3:-78853021 None:intergenic
TATTTGAGTCCAGAGCTTGA+TGG 0.458469 4.3:+78848475 MS.gene037695:CDS
GGACTCAAATATGGTAATGT+AGG 0.461253 4.3:-78848463 None:intergenic
GGCTCTTTCTGATGGATGAA+AGG 0.468116 4.3:-78852961 None:intergenic
GTCAGGCATGTTGAGGCCAT+TGG 0.468967 4.3:-78848280 None:intergenic
ATCGTTGATAAATTTATGAC+TGG 0.473147 4.3:+78852993 MS.gene037695:CDS
AAGAGCATATTCACGAGATC+TGG 0.473248 4.3:-78849726 None:intergenic
ATACAGAATCTATATGAATT+GGG 0.488950 4.3:+78851187 MS.gene037695:intron
CATAGTCCAACTCCATTGTA+TGG 0.492410 4.3:-78852885 None:intergenic
CCTTGCATAGCCAATTCTGC+TGG 0.494918 4.3:-78851256 None:intergenic
GCTTCTGGTCGTTTCTCCAA+TGG 0.503907 4.3:+78848264 MS.gene037695:CDS
GTTTGAGAATCAATTCCATA+AGG 0.506762 4.3:-78848234 None:intergenic
AACACACAAAGAAATATTGA+AGG 0.510102 4.3:-78848090 None:intergenic
TTAACCCTAATAACTTTAGG+TGG 0.521401 4.3:+78849662 MS.gene037695:CDS
CAACTCAATGCTGAAATTGG+TGG 0.521897 4.3:+78851355 MS.gene037695:CDS
AAACATGCATGCTGTGGTCA+AGG 0.523146 4.3:+78852861 MS.gene037695:CDS
CTTTAAACAGTACCAGCAAA+GGG 0.526031 4.3:+78849589 MS.gene037695:CDS
TTAATCAATTGAACAAGTTG+AGG 0.526832 4.3:-78851331 None:intergenic
TTAGGGCACAAGTTAGAAGC+TGG 0.527870 4.3:-78852912 None:intergenic
AACCTTTCACCATCAAGCTC+TGG 0.531953 4.3:-78848484 None:intergenic
AGCACTCAACTAATAAGGTC+AGG 0.533862 4.3:-78848297 None:intergenic
TTCACGAGATCTGGCTGAGT+AGG 0.549249 4.3:-78849717 None:intergenic
CAAGGACCATACAATGGAGT+TGG 0.550513 4.3:+78852879 MS.gene037695:CDS
CAGCACGAGCAGTAGTGGCT+AGG 0.552042 4.3:-78848203 None:intergenic
GTTTCTAATCCACAAGCATA+CGG 0.553825 4.3:+78851430 MS.gene037695:CDS
GTGTTGATCACCTTGAGCAT+TGG 0.558772 4.3:+78848108 MS.gene037695:CDS
TCACGAGATCTGGCTGAGTA+GGG 0.559568 4.3:-78849716 None:intergenic
TGAATCAGCACGAGCAGTAG+TGG 0.564727 4.3:-78848208 None:intergenic
TTGTTGAACACCAATGCTCA+AGG 0.567686 4.3:-78848118 None:intergenic
GGAAATATACCGTATGCTTG+TGG 0.571755 4.3:-78851439 None:intergenic
ACTTTAAACAGTACCAGCAA+AGG 0.571949 4.3:+78849588 MS.gene037695:CDS
TGTGTTTGGTGATTCTCTTG+TGG 0.575556 4.3:+78848161 MS.gene037695:CDS
AAGTTATTAGGGTTAATGCT+TGG 0.575775 4.3:-78849655 None:intergenic
TAAGTGTACTAAGATTATAT+GGG 0.583474 4.3:-78853034 None:intergenic
AAGTTAGTAGCTGTTTGAAG+AGG 0.588986 4.3:-78851301 None:intergenic
CTCTTTCTGATGGATGAAAG+GGG 0.589840 4.3:-78852959 None:intergenic
GGTGATTCTCTTGTGGACAA+TGG 0.593184 4.3:+78848168 MS.gene037695:CDS
CCAGCAGAATTGGCTATGCA+AGG 0.594783 4.3:+78851256 MS.gene037695:CDS
TAACCCTAATAACTTTAGGT+GGG 0.599439 4.3:+78849663 MS.gene037695:CDS
ATTGGAATTCTCAATGACAC+TGG 0.602237 4.3:+78848538 MS.gene037695:CDS
GTCCAGAGCTTGATGGTGAA+AGG 0.614928 4.3:+78848482 MS.gene037695:CDS
TAATAAGGTCAGGCATGTTG+AGG 0.615842 4.3:-78848287 None:intergenic
TGCACTAATTGGAGAAAGTG+AGG 0.617026 4.3:+78849616 MS.gene037695:CDS
CAAGGAAGAAATGGAGAGTG+TGG 0.633620 4.3:+78851274 MS.gene037695:CDS
ACATCAAAACATGCATGCTG+TGG 0.707273 4.3:+78852855 MS.gene037695:CDS
TGTGGTCAAGGACCATACAA+TGG 0.717474 4.3:+78852873 MS.gene037695:CDS
ATTGAGAATTCCAATCCCAG+CGG 0.771559 4.3:-78848530 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGTATAATACATATA+TGG - chr4.3:78852331-78852350 None:intergenic 10.0%
!! ATAATATAATAATTGATGTA+CGG - chr4.3:78851112-78851131 None:intergenic 10.0%
!! CAAAAAAAATAAATATTAGT+AGG - chr4.3:78850118-78850137 None:intergenic 10.0%
!! CATATATAAAAAACAAAAAA+TGG - chr4.3:78852824-78852843 None:intergenic 10.0%
!! TTGAATATAAATTCATTATA+TGG - chr4.3:78852177-78852196 None:intergenic 10.0%
!!! AATTAAATGTGTTTTTTTTT+TGG + chr4.3:78850907-78850926 MS.gene037695:intron 10.0%
!!! ATAGATTTTCAAATTTTTAA+TGG - chr4.3:78848958-78848977 None:intergenic 10.0%
!!! ATGAAATATTTTTTTTTATG+AGG + chr4.3:78850874-78850893 MS.gene037695:intron 10.0%
!!! TGAAATATTTTTTTTTATGA+GGG + chr4.3:78850875-78850894 MS.gene037695:intron 10.0%
!!! TTTTTTTTTTTAGAAATGTT+GGG - chr4.3:78850705-78850724 None:intergenic 10.0%
!!! TTTTTTTTTTTTAGAAATGT+TGG - chr4.3:78850706-78850725 None:intergenic 10.0%
!! AAACACAATTATTCATTTAT+TGG + chr4.3:78851520-78851539 MS.gene037695:intron 15.0%
!! AAATGATGAAAATTAAACAA+AGG - chr4.3:78849825-78849844 None:intergenic 15.0%
!! AATGATGAAAATTAAACAAA+GGG - chr4.3:78849824-78849843 None:intergenic 15.0%
!! ATATATTACTACTACATATT+AGG - chr4.3:78852614-78852633 None:intergenic 15.0%
!! GATAAATAATACTTTCAAAT+TGG - chr4.3:78852800-78852819 None:intergenic 15.0%
!! TATATATAAAAACAGTTGAA+TGG + chr4.3:78850028-78850047 MS.gene037695:intron 15.0%
!! TCATTACACATATAAATTTA+GGG - chr4.3:78849461-78849480 None:intergenic 15.0%
!! TTAGATAATTAGATACAAAT+AGG - chr4.3:78849520-78849539 None:intergenic 15.0%
!! TTCATTACACATATAAATTT+AGG - chr4.3:78849462-78849481 None:intergenic 15.0%
!!! ACTTCATAACATTTTATTTT+AGG - chr4.3:78852029-78852048 None:intergenic 15.0%
!!! AGAAGCTTTTTTATTTTTTT+TGG - chr4.3:78850644-78850663 None:intergenic 15.0%
!!! ATCTATTTTATTTCAATATG+TGG + chr4.3:78850774-78850793 MS.gene037695:intron 15.0%
!!! ATGTGGATTTTAATATTAAT+CGG - chr4.3:78851013-78851032 None:intergenic 15.0%
!!! CTTTTTTATATTTAAGATCT+AGG - chr4.3:78849310-78849329 None:intergenic 15.0%
!!! TAATTCACATTTTTACTATA+TGG - chr4.3:78851057-78851076 None:intergenic 15.0%
!!! TATTAGTAGGTTTTTTTATA+AGG - chr4.3:78850105-78850124 None:intergenic 15.0%
!!! TTCAACTGTTTTTATATATA+TGG - chr4.3:78850028-78850047 None:intergenic 15.0%
!!! TTCATCTAATGTATTTTTTA+GGG + chr4.3:78848380-78848399 MS.gene037695:intron 15.0%
!!! TTTCATCTAATGTATTTTTT+AGG + chr4.3:78848379-78848398 MS.gene037695:intron 15.0%
!!! TTTTACTATATGGTTATATT+TGG - chr4.3:78851047-78851066 None:intergenic 15.0%
!!! TTTTATAAGGAAAATACTAT+AGG - chr4.3:78850092-78850111 None:intergenic 15.0%
!!! TTTTTGTTTTTTATATATGC+AGG + chr4.3:78852825-78852844 MS.gene037695:intron 15.0%
!!! TTTTTTATTTTTTTTGGTAG+TGG - chr4.3:78850638-78850657 None:intergenic 15.0%
!! AAAATAAAAGACAAAACTCT+AGG - chr4.3:78851664-78851683 None:intergenic 20.0%
!! AAATCTATATCATATAAGAC+AGG + chr4.3:78848970-78848989 MS.gene037695:intron 20.0%
!! AAGTAGATCAATTATGATTA+GGG + chr4.3:78851806-78851825 MS.gene037695:intron 20.0%
!! AAGTTTAACCAAATTAAGAT+TGG - chr4.3:78851463-78851482 None:intergenic 20.0%
!! AATTGAATGTATCTAAAAAG+TGG - chr4.3:78850325-78850306 None:intergenic 20.0%
!! ATAAGTGTACTAAGATTATA+TGG - chr4.3:78853038-78853057 None:intergenic 20.0%
!! ATACAGAATCTATATGAATT+GGG + chr4.3:78851187-78851206 MS.gene037695:intron 20.0%
!! ATTCAATGTTATAACACAAT+TGG - chr4.3:78851160-78851179 None:intergenic 20.0%
!! CATTCAATTAATGATGTATA+TGG + chr4.3:78850256-78850275 MS.gene037695:intron 20.0%
!! CTATAAATTATGAATGTGAT+AGG + chr4.3:78848421-78848440 MS.gene037695:intron 20.0%
!! GTATATTTCCAATCTTAATT+TGG + chr4.3:78851452-78851471 MS.gene037695:intron 20.0%
!! TAAGTGTACTAAGATTATAT+GGG - chr4.3:78853037-78853056 None:intergenic 20.0%
!! TAATGAATTTATATTCAACC+TGG + chr4.3:78852179-78852198 MS.gene037695:intron 20.0%
!! TACTATATATTGAACCATAT+AGG - chr4.3:78852474-78852493 None:intergenic 20.0%
!! TAGATGAGTTAATTAATGTT+TGG + chr4.3:78850935-78850954 MS.gene037695:intron 20.0%
!! TATGCTAGATTTAAATTGTT+AGG + chr4.3:78851577-78851596 MS.gene037695:intron 20.0%
!! TCGATAAAAGTTTATGTATT+TGG + chr4.3:78849384-78849403 MS.gene037695:intron 20.0%
!!! AACATTATCTTTAGAAATGT+TGG - chr4.3:78850746-78850765 None:intergenic 20.0%
!!! AAGACAGGAAAATAAATTTT+TGG + chr4.3:78848985-78849004 MS.gene037695:intron 20.0%
!!! AATTTTTGGATCATACATTT+AGG + chr4.3:78848999-78849018 MS.gene037695:intron 20.0%
!!! ACAAAGAAGCTTTTATATTA+AGG - chr4.3:78850547-78850566 None:intergenic 20.0%
!!! ACATATTTTCTTAGATGTTT+AGG - chr4.3:78852695-78852714 None:intergenic 20.0%
!!! ACATTATCTTTAGAAATGTT+GGG - chr4.3:78850745-78850764 None:intergenic 20.0%
!!! ATTTTTGGATCATACATTTA+GGG + chr4.3:78849000-78849019 MS.gene037695:intron 20.0%
!!! CAAAGAAGCTTTTATATTAA+GGG - chr4.3:78850546-78850565 None:intergenic 20.0%
!!! TAATTAATATGTTTAGCTCT+TGG + chr4.3:78851689-78851708 MS.gene037695:intron 20.0%
!!! TTTTGTGAACAACTATTATT+TGG + chr4.3:78849691-78849710 MS.gene037695:CDS 20.0%
!!! TTTTTTTATGAGGGTTAATT+AGG + chr4.3:78850884-78850903 MS.gene037695:intron 20.0%
! AAATACATTAGATGAAAGCT+AGG - chr4.3:78848376-78848395 None:intergenic 25.0%
! AAATCACAAAATAATGCTAG+TGG - chr4.3:78852215-78852234 None:intergenic 25.0%
! AACAATGCATAATATATGCA+AGG + chr4.3:78850593-78850612 MS.gene037695:intron 25.0%
! AACACACAAAGAAATATTGA+AGG - chr4.3:78848093-78848112 None:intergenic 25.0%
! AACATAATCCATTTGAATAG+TGG - chr4.3:78852535-78852554 None:intergenic 25.0%
! AATAAAAGGGTTATGTTAAC+CGG + chr4.3:78850364-78850383 MS.gene037695:intron 25.0%
! AATACATTAGATGAAAGCTA+GGG - chr4.3:78848375-78848394 None:intergenic 25.0%
! AATGTGATAGGTGAAAAAAT+TGG + chr4.3:78848433-78848452 MS.gene037695:intron 25.0%
! AGTAGATCAATTATGATTAG+GGG + chr4.3:78851807-78851826 MS.gene037695:intron 25.0%
! ATAATAATTGATGTACGGAT+TGG - chr4.3:78851107-78851126 None:intergenic 25.0%
! ATATTAAGGGTAATGTTAAC+CGG - chr4.3:78850533-78850552 None:intergenic 25.0%
! ATGTGATAGGTGAAAAAATT+GGG + chr4.3:78848434-78848453 MS.gene037695:intron 25.0%
! ATTATACCAACAAAAGTTTG+TGG - chr4.3:78852727-78852746 None:intergenic 25.0%
! CAAGTAGATCAATTATGATT+AGG + chr4.3:78851805-78851824 MS.gene037695:intron 25.0%
! CATACAGAATCTATATGAAT+TGG + chr4.3:78851186-78851205 MS.gene037695:intron 25.0%
! GACTTTGACCAAATATATTA+GGG - chr4.3:78850004-78850023 None:intergenic 25.0%
! GAGTAAAGAACCTTTAAATT+GGG + chr4.3:78850141-78850160 MS.gene037695:intron 25.0%
! GGATTTGACAAAAAAAATGT+AGG + chr4.3:78852117-78852136 MS.gene037695:intron 25.0%
! TACTATATGGTTATATTTGG+TGG - chr4.3:78851044-78851063 None:intergenic 25.0%
! TAGTATAAGATATGGAGTTT+AGG - chr4.3:78848685-78848704 None:intergenic 25.0%
! TATATTATCTTGAACGAGTT+GGG - chr4.3:78852148-78852167 None:intergenic 25.0%
! TATGTTGCAATCATGTTAAA+TGG + chr4.3:78852549-78852568 MS.gene037695:intron 25.0%
! TGACTTTGACCAAATATATT+AGG - chr4.3:78850005-78850024 None:intergenic 25.0%
! TGAGTAAAGAACCTTTAAAT+TGG + chr4.3:78850140-78850159 MS.gene037695:intron 25.0%
! TGTAGCAATAGTATAAGATA+TGG - chr4.3:78848693-78848712 None:intergenic 25.0%
! TTAATCAATTGAACAAGTTG+AGG - chr4.3:78851334-78851353 None:intergenic 25.0%
! TTACTACTACATATTAGGAA+TGG - chr4.3:78852609-78852628 None:intergenic 25.0%
! TTATACCAACAAAAGTTTGT+GGG - chr4.3:78852726-78852745 None:intergenic 25.0%
! TTTGACTAAATGTAGCTATT+TGG + chr4.3:78851764-78851783 MS.gene037695:intron 25.0%
!! AAAGTAGAATTTTCCTTTCA+CGG + chr4.3:78848619-78848638 MS.gene037695:intron 25.0%
!! ACTGTTTAAAGTATGCTAAT+TGG - chr4.3:78849580-78849599 None:intergenic 25.0%
!! ATCGTTGATAAATTTATGAC+TGG + chr4.3:78852993-78853012 MS.gene037695:CDS 25.0%
!! CTGTTTAAAGTATGCTAATT+GGG - chr4.3:78849579-78849598 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr4.3:78850349-78850330 None:intergenic 25.0%
!!! AAATGTTTTTTCAATGAGCA+TGG - chr4.3:78852662-78852681 None:intergenic 25.0%
!!! GTGTAATTTAAGTGTTGAAT+AGG + chr4.3:78851932-78851951 MS.gene037695:intron 25.0%
!!! TACCTTTTTTAACAGTGTTA+CGG - chr4.3:78852394-78852413 None:intergenic 25.0%
!!! TAGGGCATGTTTTAATTAAT+TGG + chr4.3:78848398-78848417 MS.gene037695:intron 25.0%
!!! TTTATCAACGATTAGTCTAT+TGG - chr4.3:78852985-78853004 None:intergenic 25.0%
AAATATTACGTGGATAGGTT+TGG - chr4.3:78852096-78852115 None:intergenic 30.0%
AAATGAGCACTCAACTAATA+AGG - chr4.3:78848305-78848324 None:intergenic 30.0%
AAGTTATTAGGGTTAATGCT+TGG - chr4.3:78849658-78849677 None:intergenic 30.0%
AATATTACGTGGATAGGTTT+GGG - chr4.3:78852095-78852114 None:intergenic 30.0%
AATCAACTCAATGCTGAAAT+TGG + chr4.3:78851352-78851371 MS.gene037695:CDS 30.0%
AATGCATAAAGATCCCTATT+AGG - chr4.3:78852933-78852952 None:intergenic 30.0%
AATTATAGTCAAGATTGCAC+TGG + chr4.3:78852635-78852654 MS.gene037695:intron 30.0%
ACACAATTGGTATGAATTGT+TGG - chr4.3:78851147-78851166 None:intergenic 30.0%
ACTCATTGTGACACAAATTA+TGG + chr4.3:78851858-78851877 MS.gene037695:intron 30.0%
AGCATATGAACATAGTACAT+AGG - chr4.3:78851563-78851582 None:intergenic 30.0%
AGGGATAAATTATCAAACTG+TGG + chr4.3:78849244-78849263 MS.gene037695:intron 30.0%
ATCCAAAATATTACGTGGAT+AGG - chr4.3:78852101-78852120 None:intergenic 30.0%
ATCTACTATCTCAAGATCTT+AGG - chr4.3:78851740-78851759 None:intergenic 30.0%
ATGCATAAAGATCCCTATTA+GGG - chr4.3:78852932-78852951 None:intergenic 30.0%
ATGTAACGGTAAGATTCAAT+TGG + chr4.3:78850963-78850982 MS.gene037695:intron 30.0%
ATTATATGGGTGCATGTAAT+CGG - chr4.3:78853024-78853043 None:intergenic 30.0%
ATTCCCACCTAAAGTTATTA+GGG - chr4.3:78849669-78849688 None:intergenic 30.0%
CACTGTTAAAAAAGGTAAGA+TGG + chr4.3:78852397-78852416 MS.gene037695:intron 30.0%
CTATATTATCTTGAACGAGT+TGG - chr4.3:78852149-78852168 None:intergenic 30.0%
GACACAAATTATGGATTTCT+TGG + chr4.3:78851867-78851886 MS.gene037695:intron 30.0%
GCATTAACCCTAATAACTTT+AGG + chr4.3:78849659-78849678 MS.gene037695:CDS 30.0%
GTCAAATCCAAAATATTACG+TGG - chr4.3:78852106-78852125 None:intergenic 30.0%
GTTTGAGAATCAATTCCATA+AGG - chr4.3:78848237-78848256 None:intergenic 30.0%
TAAAAGACAAAACTCTAGGT+AGG - chr4.3:78851660-78851679 None:intergenic 30.0%
TAACCCTAATAACTTTAGGT+GGG + chr4.3:78849663-78849682 MS.gene037695:CDS 30.0%
TCTTAGTACACTTATTGCTA+TGG + chr4.3:78853043-78853062 MS.gene037695:CDS 30.0%
TGTATCAAAGCCCAATTTAA+AGG - chr4.3:78850154-78850173 None:intergenic 30.0%
TTAACCCTAATAACTTTAGG+TGG + chr4.3:78849662-78849681 MS.gene037695:CDS 30.0%
! AACCTATCCACGTAATATTT+TGG + chr4.3:78852096-78852115 MS.gene037695:intron 30.0%
! AGAGGGTGTAGTTAATAAAA+GGG + chr4.3:78850351-78850370 MS.gene037695:intron 30.0%
! ATAGGGATCTTTATGCATTT+TGG + chr4.3:78852934-78852953 MS.gene037695:CDS 30.0%
! CAAATTTTGCAAATTCACGA+TGG + chr4.3:78852344-78852363 MS.gene037695:intron 30.0%
! CTACTTGCTACAACATTAAA+TGG - chr4.3:78851792-78851811 None:intergenic 30.0%
! CTAGGTAGGTAACAAATTTT+TGG - chr4.3:78851646-78851665 None:intergenic 30.0%
! TAAACAAAGGGAAGTACATA+AGG - chr4.3:78849812-78849831 None:intergenic 30.0%
! TAGGGATCTTTATGCATTTT+GGG + chr4.3:78852935-78852954 MS.gene037695:CDS 30.0%
! TATATGGTTATATTTGGTGG+TGG - chr4.3:78851041-78851060 None:intergenic 30.0%
! TGAGTATCGCAAAATTCTTA+TGG + chr4.3:78849775-78849794 MS.gene037695:CDS 30.0%
! TTTTTCCCACAAACTTTTGT+TGG + chr4.3:78852718-78852737 MS.gene037695:intron 30.0%
!! AAATGCATTTGCTATGCATT+TGG + chr4.3:78851402-78851421 MS.gene037695:CDS 30.0%
!! GTTGTTACATCACACTTTTT+GGG + chr4.3:78849955-78849974 MS.gene037695:intron 30.0%
!! TACGGATTGGAAAAAATAGA+GGG - chr4.3:78851094-78851113 None:intergenic 30.0%
!! TTAATATGTTTAGCTCTTGG+TGG + chr4.3:78851692-78851711 MS.gene037695:intron 30.0%
!!! CACTTTTTGGGTCATAATAT+AGG + chr4.3:78849967-78849986 MS.gene037695:intron 30.0%
!!! TTATTTTTTTTGGTAGTGGC+CGG - chr4.3:78850634-78850653 None:intergenic 30.0%
AACCACAACCACTATTCAAA+TGG + chr4.3:78852524-78852543 MS.gene037695:intron 35.0%
AAGTTAGTAGCTGTTTGAAG+AGG - chr4.3:78851304-78851323 None:intergenic 35.0%
AATCATGTTAAATGGTGTGG+GGG + chr4.3:78852557-78852576 MS.gene037695:intron 35.0%
AATGTTTGGCAAGCATGTAA+CGG + chr4.3:78850949-78850968 MS.gene037695:intron 35.0%
AATTATCAAACTGTGGCTAG+TGG + chr4.3:78849251-78849270 MS.gene037695:intron 35.0%
ACCTTCTAACTAACATGACT+AGG - chr4.3:78851609-78851628 None:intergenic 35.0%
ACTATATTTGCTTCCGTAAC+AGG + chr4.3:78850494-78850513 MS.gene037695:intron 35.0%
ACTTTAAACAGTACCAGCAA+AGG + chr4.3:78849588-78849607 MS.gene037695:CDS 35.0%
ATCCATTTGAATAGTGGTTG+TGG - chr4.3:78852529-78852548 None:intergenic 35.0%
ATGAGGAAGACAACATAATC+AGG - chr4.3:78849752-78849771 None:intergenic 35.0%
ATGCTAATTGGGCAGTAATT+CGG - chr4.3:78849568-78849587 None:intergenic 35.0%
ATTATCAAACTGTGGCTAGT+GGG + chr4.3:78849252-78849271 MS.gene037695:intron 35.0%
ATTGGAATTCTCAATGACAC+TGG + chr4.3:78848538-78848557 MS.gene037695:CDS 35.0%
CAATCATGTTAAATGGTGTG+GGG + chr4.3:78852556-78852575 MS.gene037695:intron 35.0%
CACCGTAACACTGTTAAAAA+AGG + chr4.3:78852389-78852408 MS.gene037695:intron 35.0%
CATTCCCACCTAAAGTTATT+AGG - chr4.3:78849670-78849689 None:intergenic 35.0%
CCTTCTAACTAACATGACTA+GGG - chr4.3:78851608-78851627 None:intergenic 35.0%
CTCCTAAGCCCTAATATATT+TGG + chr4.3:78849993-78850012 MS.gene037695:intron 35.0%
CTTTAAACAGTACCAGCAAA+GGG + chr4.3:78849589-78849608 MS.gene037695:CDS 35.0%
GACCAAATATATTAGGGCTT+AGG - chr4.3:78849998-78850017 None:intergenic 35.0%
GCAATCATGTTAAATGGTGT+GGG + chr4.3:78852555-78852574 MS.gene037695:intron 35.0%
GCAATTACATTTAGCACACA+TGG - chr4.3:78849117-78849136 None:intergenic 35.0%
GCATAGATGAACACATGATT+AGG - chr4.3:78851382-78851401 None:intergenic 35.0%
GGTAAGAACACATTCAAAGT+TGG + chr4.3:78850049-78850068 MS.gene037695:intron 35.0%
GTTTCTAATCCACAAGCATA+CGG + chr4.3:78851430-78851449 MS.gene037695:CDS 35.0%
TAGATCCTCTCATTTATGAG+AGG - chr4.3:78849081-78849100 None:intergenic 35.0%
TATTAGCTATATACACCCTC+CGG + chr4.3:78850199-78850218 MS.gene037695:intron 35.0%
TGAATTTGTCGCAGTTACAA+TGG + chr4.3:78852270-78852289 MS.gene037695:intron 35.0%
TGCAATCATGTTAAATGGTG+TGG + chr4.3:78852554-78852573 MS.gene037695:intron 35.0%
TGCATAATATATGCAAGGTC+TGG + chr4.3:78850598-78850617 MS.gene037695:intron 35.0%
TGCTTATATTAGTGACCAGA+GGG + chr4.3:78850334-78850353 MS.gene037695:intron 35.0%
TGTGAATGTAGCTTAAGACA+TGG + chr4.3:78851901-78851920 MS.gene037695:intron 35.0%
TTGCTTATATTAGTGACCAG+AGG + chr4.3:78850333-78850352 MS.gene037695:intron 35.0%
! AAAGGGAAGTACATAAGGAT+AGG - chr4.3:78849807-78849826 None:intergenic 35.0%
! CAGAGGGTGTAGTTAATAAA+AGG + chr4.3:78850350-78850369 MS.gene037695:intron 35.0%
! CGTTGTTACATCACACTTTT+TGG + chr4.3:78849954-78849973 MS.gene037695:intron 35.0%
! CTTTTATTAACTACACCCTC+TGG - chr4.3:78850352-78850371 None:intergenic 35.0%
! GAGAGTGAGTTGAAAATTGA+AGG + chr4.3:78849022-78849041 MS.gene037695:intron 35.0%
! GGACTCAAATATGGTAATGT+AGG - chr4.3:78848466-78848485 None:intergenic 35.0%
! TTCTAACTTGTGCCCTAATA+GGG + chr4.3:78852917-78852936 MS.gene037695:CDS 35.0%
! TTTTGCGATACTCAGAAATG+AGG - chr4.3:78849769-78849788 None:intergenic 35.0%
!! ATTATGATTAGGGGTGTTTG+TGG + chr4.3:78851816-78851835 MS.gene037695:intron 35.0%
!! CTCAAAGTTTTGTACACGTA+CGG - chr4.3:78849171-78849190 None:intergenic 35.0%
!! GTACGGATTGGAAAAAATAG+AGG - chr4.3:78851095-78851114 None:intergenic 35.0%
!! TTGTGTCACAATGAGTTGAT+CGG - chr4.3:78851854-78851873 None:intergenic 35.0%
!!! CTTTTTTAACAGTGTTACGG+TGG - chr4.3:78852391-78852410 None:intergenic 35.0%
!!! GCAAGAGCATTTTTTGTGTT+TGG + chr4.3:78848147-78848166 MS.gene037695:CDS 35.0%
!!! TATTTTTTTTGGTAGTGGCC+GGG - chr4.3:78850633-78850652 None:intergenic 35.0%
ACATCAAAACATGCATGCTG+TGG + chr4.3:78852855-78852874 MS.gene037695:CDS 40.0%
AGCACTCAACTAATAAGGTC+AGG - chr4.3:78848300-78848319 None:intergenic 40.0%
ATTGAGAATTCCAATCCCAG+CGG - chr4.3:78848533-78848552 None:intergenic 40.0%
ATTGCTGTGTTAACCGTGAA+AGG - chr4.3:78848635-78848654 None:intergenic 40.0%
CAACTCAATGCTGAAATTGG+TGG + chr4.3:78851355-78851374 MS.gene037695:CDS 40.0%
CATAGTCCAACTCCATTGTA+TGG - chr4.3:78852888-78852907 None:intergenic 40.0%
CATATTAGGAATGGTCCCTT+TGG - chr4.3:78852600-78852619 None:intergenic 40.0%
CCCTAGTCATGTTAGTTAGA+AGG + chr4.3:78851605-78851624 MS.gene037695:intron 40.0%
GATGGTGAAAGGTTGCTTAA+TGG + chr4.3:78848493-78848512 MS.gene037695:CDS 40.0%
GGAAATATACCGTATGCTTG+TGG - chr4.3:78851442-78851461 None:intergenic 40.0%
TAATAAGGTCAGGCATGTTG+AGG - chr4.3:78848290-78848309 None:intergenic 40.0%
TATTTGAGTCCAGAGCTTGA+TGG + chr4.3:78848475-78848494 MS.gene037695:CDS 40.0%
TCTCAAACTCATAGAGCTTC+TGG + chr4.3:78848249-78848268 MS.gene037695:CDS 40.0%
TGCACTAATTGGAGAAAGTG+AGG + chr4.3:78849616-78849635 MS.gene037695:CDS 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr4.3:78850217-78850236 None:intergenic 40.0%
TGTGACCTCTCATAAATGAG+AGG + chr4.3:78849073-78849092 MS.gene037695:intron 40.0%
TGTTGAAAGCAGCGCATATT+AGG + chr4.3:78850987-78851006 MS.gene037695:intron 40.0%
TTGCAAATTCACGATGGCTT+AGG + chr4.3:78852350-78852369 MS.gene037695:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr4.3:78850218-78850237 None:intergenic 40.0%
TTGGCTATGCAAGGAAGAAA+TGG + chr4.3:78851265-78851284 MS.gene037695:CDS 40.0%
TTGTTGAACACCAATGCTCA+AGG - chr4.3:78848121-78848140 None:intergenic 40.0%
TTTCCTTAACCAATGCTCCA+GGG - chr4.3:78850393-78850412 None:intergenic 40.0%
! AAGAGCATATTCACGAGATC+TGG - chr4.3:78849729-78849748 None:intergenic 40.0%
! AAGGTCTGGAGTTAAAATCC+CGG + chr4.3:78850612-78850631 MS.gene037695:intron 40.0%
! ATTGGGAGCAAGAAGAGTTT+TGG + chr4.3:78851204-78851223 MS.gene037695:CDS 40.0%
! CAAAGGGTTAGTGCACTAAT+TGG + chr4.3:78849605-78849624 MS.gene037695:CDS 40.0%
! CTCTTTCTGATGGATGAAAG+GGG - chr4.3:78852962-78852981 None:intergenic 40.0%
! CTTCTAACTTGTGCCCTAAT+AGG + chr4.3:78852916-78852935 MS.gene037695:CDS 40.0%
! GCTCTTTCTGATGGATGAAA+GGG - chr4.3:78852963-78852982 None:intergenic 40.0%
! TGTGTTTGGTGATTCTCTTG+TGG + chr4.3:78848161-78848180 MS.gene037695:CDS 40.0%
!! AAGAGTTTTGGTGACAGGAA+CGG + chr4.3:78851216-78851235 MS.gene037695:CDS 40.0%
!! AATTGACTTTTGGGGACCAA+AGG + chr4.3:78852581-78852600 MS.gene037695:intron 40.0%
!! AGTCTATTGGCTCTTTCTGA+TGG - chr4.3:78852972-78852991 None:intergenic 40.0%
!! ATTGACTTTTGGGGACCAAA+GGG + chr4.3:78852582-78852601 MS.gene037695:intron 40.0%
!! ATTTGGTGGTGGACTTTATG+TGG - chr4.3:78851030-78851049 None:intergenic 40.0%
!! CGTGCTGATTCATATCCTTA+TGG + chr4.3:78848219-78848238 MS.gene037695:CDS 40.0%
!! TCAAGCTCTGGACTCAAATA+TGG - chr4.3:78848475-78848494 None:intergenic 40.0%
!! TGTGGGGGAAATTGACTTTT+GGG + chr4.3:78852572-78852591 MS.gene037695:intron 40.0%
AAACATGCATGCTGTGGTCA+AGG + chr4.3:78852861-78852880 MS.gene037695:CDS 45.0%
AACCTTTCACCATCAAGCTC+TGG - chr4.3:78848487-78848506 None:intergenic 45.0%
CAAGGAAGAAATGGAGAGTG+TGG + chr4.3:78851274-78851293 MS.gene037695:CDS 45.0%
CAAGGACCATACAATGGAGT+TGG + chr4.3:78852879-78852898 MS.gene037695:CDS 45.0%
CTAACTAACATGACTAGGGC+TGG - chr4.3:78851604-78851623 None:intergenic 45.0%
GGTGATTCTCTTGTGGACAA+TGG + chr4.3:78848168-78848187 MS.gene037695:CDS 45.0%
GGTGGCTAGGATCATTAACT+TGG + chr4.3:78851710-78851729 MS.gene037695:intron 45.0%
GTTTCCTTAACCAATGCTCC+AGG - chr4.3:78850394-78850413 None:intergenic 45.0%
TAAGATGGCCACTAGAGCAA+TGG + chr4.3:78852412-78852431 MS.gene037695:intron 45.0%
TGTGGTCAAGGACCATACAA+TGG + chr4.3:78852873-78852892 MS.gene037695:CDS 45.0%
TTAGGGCACAAGTTAGAAGC+TGG - chr4.3:78852915-78852934 None:intergenic 45.0%
TTAGTGCACTAACCCTTTGC+TGG - chr4.3:78849604-78849623 None:intergenic 45.0%
TTCCTTAACCAATGCTCCAG+GGG - chr4.3:78850392-78850411 None:intergenic 45.0%
! AATTTTGCTTCCGCTGGGAT+TGG + chr4.3:78848520-78848539 MS.gene037695:CDS 45.0%
! GGCTCTTTCTGATGGATGAA+AGG - chr4.3:78852964-78852983 None:intergenic 45.0%
! GTGCTAATTTTGCTTCCGCT+GGG + chr4.3:78848515-78848534 MS.gene037695:CDS 45.0%
! GTGTTGATCACCTTGAGCAT+TGG + chr4.3:78848108-78848127 MS.gene037695:CDS 45.0%
!! AGAGTTTTGGTGACAGGAAC+GGG + chr4.3:78851217-78851236 MS.gene037695:CDS 45.0%
!! ATGTTTAGCTCTTGGTGGCT+AGG + chr4.3:78851697-78851716 MS.gene037695:intron 45.0%
!! ATTAGGGGTGTTTGTGGAGA+TGG + chr4.3:78851822-78851841 MS.gene037695:intron 45.0%
!! GCAAGAAGAGTTTTGGTGAC+AGG + chr4.3:78851211-78851230 MS.gene037695:CDS 45.0%
!! GTGGGGGAAATTGACTTTTG+GGG + chr4.3:78852573-78852592 MS.gene037695:intron 45.0%
!! GTGTGGGGGAAATTGACTTT+TGG + chr4.3:78852571-78852590 MS.gene037695:intron 45.0%
!! TTAGGGGTGTTTGTGGAGAT+GGG + chr4.3:78851823-78851842 MS.gene037695:intron 45.0%
!!! AATTTAAAATTTTCTTTTTT+TGG - chr4.3:78850416-78850435 None:intergenic 5.0%
!!! TTCTTTTTTTTTTTTTTTTA+GGG + chr4.3:78849225-78849244 MS.gene037695:intron 5.0%
!!! TTTCTTTTTTTTTTTTTTTT+AGG + chr4.3:78849224-78849243 MS.gene037695:intron 5.0%
AATGTTAACCGGTGCACCTG+AGG - chr4.3:78850522-78850541 None:intergenic 50.0%
AGGTTGTGTGCCAGCAGAAT+TGG + chr4.3:78851246-78851265 MS.gene037695:CDS 50.0%
CATGTGTCAGTCGAGCTCAT+GGG + chr4.3:78852442-78852461 MS.gene037695:intron 50.0%
CCAACTGAGCTAAGCTCACA+AGG - chr4.3:78850570-78850589 None:intergenic 50.0%
CCAGCAGAATTGGCTATGCA+AGG + chr4.3:78851256-78851275 MS.gene037695:CDS 50.0%
CCTTGCATAGCCAATTCTGC+TGG - chr4.3:78851259-78851278 None:intergenic 50.0%
CCTTGTGAGCTTAGCTCAGT+TGG + chr4.3:78850567-78850586 MS.gene037695:intron 50.0%
GCTAGTGGTCTACACTAACC+AGG - chr4.3:78852200-78852219 None:intergenic 50.0%
GCTTCTGGTCGTTTCTCCAA+TGG + chr4.3:78848264-78848283 MS.gene037695:CDS 50.0%
GTGGATAGGTTTGGGTCAAG+TGG - chr4.3:78852087-78852106 None:intergenic 50.0%
TCACGAGATCTGGCTGAGTA+GGG - chr4.3:78849719-78849738 None:intergenic 50.0%
TCTGCTGGCACACAACCTAA+TGG - chr4.3:78851244-78851263 None:intergenic 50.0%
TGAATCAGCACGAGCAGTAG+TGG - chr4.3:78848211-78848230 None:intergenic 50.0%
TTCACGAGATCTGGCTGAGT+AGG - chr4.3:78849720-78849739 None:intergenic 50.0%
! GGTGCTAATTTTGCTTCCGC+TGG + chr4.3:78848514-78848533 MS.gene037695:CDS 50.0%
!! CTCATGGGTTGGGACCTATA+TGG + chr4.3:78852457-78852476 MS.gene037695:intron 50.0%
!! GTCCAGAGCTTGATGGTGAA+AGG + chr4.3:78848482-78848501 MS.gene037695:CDS 50.0%
GCACAAGGCCATTGCTCTAG+TGG - chr4.3:78852423-78852442 None:intergenic 55.0%
GCATGTGTCAGTCGAGCTCA+TGG + chr4.3:78852441-78852460 MS.gene037695:intron 55.0%
GCTCGACTGACACATGCACA+AGG - chr4.3:78852438-78852457 None:intergenic 55.0%
GTCAGGCATGTTGAGGCCAT+TGG - chr4.3:78848283-78848302 None:intergenic 55.0%
GTCAGTCGAGCTCATGGGTT+GGG + chr4.3:78852447-78852466 MS.gene037695:intron 55.0%
GTGACAGGAACGGGACCATT+AGG + chr4.3:78851226-78851245 MS.gene037695:CDS 55.0%
GTTATGTTAACCGGTGCCCC+TGG + chr4.3:78850373-78850392 MS.gene037695:intron 55.0%
TGTCAGTCGAGCTCATGGGT+TGG + chr4.3:78852446-78852465 MS.gene037695:intron 55.0%
! TGCACCTGAGGCACCTGTTA+CGG - chr4.3:78850510-78850529 None:intergenic 55.0%
!! TGCCCCTGGAGCATTGGTTA+AGG + chr4.3:78850387-78850406 MS.gene037695:intron 55.0%
AACAGGTGCCTCAGGTGCAC+CGG + chr4.3:78850511-78850530 MS.gene037695:intron 60.0%
CAGCACGAGCAGTAGTGGCT+AGG - chr4.3:78848206-78848225 None:intergenic 60.0%
GCTTCCGTAACAGGTGCCTC+AGG + chr4.3:78850503-78850522 MS.gene037695:intron 60.0%
! AACCAATGCTCCAGGGGCAC+CGG - chr4.3:78850386-78850405 None:intergenic 60.0%
AACCGGTGCCCCTGGAGCAT+TGG + chr4.3:78850381-78850400 MS.gene037695:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 78848078 78853079 78848078 ID=MS.gene037695
chr4.3 mRNA 78848078 78853079 78848078 ID=MS.gene037695.t1;Parent=MS.gene037695
chr4.3 exon 78848078 78848309 78848078 ID=MS.gene037695.t1.exon1;Parent=MS.gene037695.t1
chr4.3 CDS 78848078 78848309 78848078 ID=cds.MS.gene037695.t1;Parent=MS.gene037695.t1
chr4.3 exon 78848443 78848570 78848443 ID=MS.gene037695.t1.exon2;Parent=MS.gene037695.t1
chr4.3 CDS 78848443 78848570 78848443 ID=cds.MS.gene037695.t1;Parent=MS.gene037695.t1
chr4.3 exon 78849554 78849796 78849554 ID=MS.gene037695.t1.exon3;Parent=MS.gene037695.t1
chr4.3 CDS 78849554 78849796 78849554 ID=cds.MS.gene037695.t1;Parent=MS.gene037695.t1
chr4.3 exon 78851193 78851451 78851193 ID=MS.gene037695.t1.exon4;Parent=MS.gene037695.t1
chr4.3 CDS 78851193 78851451 78851193 ID=cds.MS.gene037695.t1;Parent=MS.gene037695.t1
chr4.3 exon 78852847 78853079 78852847 ID=MS.gene037695.t1.exon5;Parent=MS.gene037695.t1
chr4.3 CDS 78852847 78853079 78852847 ID=cds.MS.gene037695.t1;Parent=MS.gene037695.t1
Gene Sequence

>MS.gene037695

ATGAATATTATTCCTTCAATATTTCTTTGTGTGTTGATCACCTTGAGCATTGGTGTTCAACAAATTGAAGCAAGAGCATTTTTTGTGTTTGGTGATTCTCTTGTGGACAATGGAAATAATAACTTCCTAGCCACTACTGCTCGTGCTGATTCATATCCTTATGGAATTGATTCTCAAACTCATAGAGCTTCTGGTCGTTTCTCCAATGGCCTCAACATGCCTGACCTTATTAGTTGAGTGCTCATTTTTATATTTTATTTATTTGTGATTATTATTTTCAATTATATATAGTTTCCCTAGCTTTCATCTAATGTATTTTTTAGGGCATGTTTTAATTAATTGGCTATAAATTATGAATGTGATAGGTGAAAAAATTGGGTCAGAGCCTACATTACCATATTTGAGTCCAGAGCTTGATGGTGAAAGGTTGCTTAATGGTGCTAATTTTGCTTCCGCTGGGATTGGAATTCTCAATGACACTGGAGTTCAGTTTGTAAGTTGCATATAATTTATAAATAATAACTTTTATTAATACACAAAAAAAGTAGAATTTTCCTTTCACGGTTAACACAGCAATTCATTTTCTCATGTTCATGTTTTTTAACCTAAACTCCATATCTTATACTATTGCTACATTTGTTCTTAAATATATATGATTTTCTCGAAATCACTTGAATTAAAAGTGTTTTTTCTCTCTTGAGAAGTTGAATTAAGAAATTTAGAAGTAGTATTAAATTTGTTGATAAATTATATTGTTTTTTTCAAGATTAATGATAGAAAGTTAATTTAATAACTTATTTTTTCAAATTAATTGCATGTATTGTTGTAAAAAAATAAAATAATAATTAGAGATATTATAGTAAAAAAAGCATTAATACCATTAAAAATTTGAAAATCTATATCATATAAGACAGGAAAATAAATTTTTGGATCATACATTTAGGGAGAGTGAGTTGAAAATTGAAGGTGAAGAATTGAATGATATAGATTGAAAATGTGACCTCTCATAAATGAGAGGATCTACTCTCACTTAAGACCATGTGTGCTAAATGTAATTGCTTTAACATGAAAAGAAGTTAAGTTCAGTATTCCGTACGTGTACAAAACTTTGAGAACAACAACAAATTGAAAGTGACTAGATGTTGATTTCTTTTTTTTTTTTTTTTAGGGATAAATTATCAAACTGTGGCTAGTGGGAAGATGTTGATTTCTTAATTACTCATTCTTATCCTAGATCTTAAATATAAAAAAGAAAGTTTGTTCAATAAAAGTCAATATATTTGATAAAAAATTTAGATCAAATATATCGATAAAAGTTTATGTATTTGGTCTAAAATGAAAAGAGATACTACTACATAATGATGACATAACACAAAGAAACCCTAAATTTATATGTGTAATGAAATAAATCAATATTATGACACTGAACTACTACTATTCCTATTTGTATCTAATTATCTAAATATAATTTTGCAGATTAACATAATCCGAATTACTGCCCAATTAGCATACTTTAAACAGTACCAGCAAAGGGTTAGTGCACTAATTGGAGAAAGTGAGGCACAAAAATTAGTGAACCAAGCATTAACCCTAATAACTTTAGGTGGGAATGATTTTGTGAACAACTATTATTTGGTTCCCTACTCAGCCAGATCTCGTGAATATGCTCTTCCTGATTATGTTGTCTTCCTCATTTCTGAGTATCGCAAAATTCTTATGGTATGTTCCTATCCTTATGTACTTCCCTTTGTTTAATTTTCATCATTTATTTTGTTCTTAAATTTTTTCATTATTATATTGTTTTTTTTGTGCAAATCTATTGTTGTTTTTTATTTGTAGTTTATTTATTCTTTGACAAATTATTTGAGATTTATTACGTTGTTACATCACACTTTTTGGGTCATAATATAGGCTGCTCCTAAGCCCTAATATATTTGGTCAAAGTCACCATATATATAAAAACAGTTGAATGGTAAGAACACATTCAAAGTTGGTTTAAGAGTTAATGAGACCTATAGTATTTTCCTTATAAAAAAACCTACTAATATTTATTTTTTTTGTTTGAGTAAAGAACCTTTAAATTGGGCTTTGATACAAGTAGTAGAGATATTTTGTTTAAAATATTAGCTATATACACCCTCCGGTCACTAATATAAGCAAAAATCCACTTTTTAGATACATTCAATTAATGATGTATATGGTCTTTATTATATGTCACATACATCATTAATTGAATGTATCTAAAAAGTAGATTTTTGCTTATATTAGTGACCAGAGGGTGTAGTTAATAAAAGGGTTATGTTAACCGGTGCCCCTGGAGCATTGGTTAAGGAAACCAAAAAAAGAAAATTTTAAATTAAAAGAAATACTTTTTAGACTTTTAATTAGTTGATTGCACAAGTTCTAATGTGATGTTACTATATTTGCTTCCGTAACAGGTGCCTCAGGTGCACCGGTTAACATTACCCTTAATATAAAAGCTTCTTTGTCCTTGTGAGCTTAGCTCAGTTGGTATAACAATGCATAATATATGCAAGGTCTGGAGTTAAAATCCCGGCCACTACCAAAAAAAATAAAAAAGCTTCTTTTTAGTAAAAAAAAATAAAAATAAACTTCTTTTTTCACCCAACATTTCTAAAAAAAAAAAAAAAGATTATTTTTTCACCCAACATTTCTAAAGATAATGTTAGAAGAAGATCTATTTTATTTCAATATGTGGTTGTGTTTTATCACTTCTCTAAAAGCTACACAAACTAGTGTAGCAGTTGAATTCATAAATGATAATTTAGCATAAATATGAAATATTTTTTTTTATGAGGGTTAATTAGGAATTAAATGTGTTTTTTTTTTGGTATAGTAGATGAGTTAATTAATGTTTGGCAAGCATGTAACGGTAAGATTCAATTGGTTGTTGAAAGCAGCGCATATTAGGCCGATTAATATTAAAATCCACATAAAGTCCACCACCAAATATAACCATATAGTAAAAATGTGAATTAATGCTCTTACATATCCCTCTATTTTTTCCAATCCGTACATCAATTATTATATTATTTCAAAATCTAGCCAACAATTCATACCAATTGTGTTATAACATTGAATTAAATGCATACAGAATCTATATGAATTGGGAGCAAGAAGAGTTTTGGTGACAGGAACGGGACCATTAGGTTGTGTGCCAGCAGAATTGGCTATGCAAGGAAGAAATGGAGAGTGTGGTGTTCCTCTTCAAACAGCTACTAACTTGTTCAATCCTCAACTTGTTCAATTGATTAATCAACTCAATGCTGAAATTGGTGGTCCTAATCATGTGTTCATCTATGCAAATGCATTTGCTATGCATTTGGATTTCGTTTCTAATCCACAAGCATACGGTATATTTCCAATCTTAATTTGGTTAAACTTTTGCAGCTTTAGTAATAATCATAGTAGTAATAATTTAAAACACAATTATTCATTTATTGGTTCAACATATGTTTTTTCCTATGTACTATGTTCATATGCTAGATTTAAATTGTTAGGTCCAGCCCTAGTCATGTTAGTTAGAAGGTTAAATTCAGTATAGCCAAAAATTTGTTACCTACCTAGAGTTTTGTCTTTTATTTTAAGTCTAATTAATATGTTTAGCTCTTGGTGGCTAGGATCATTAACTTGGTTCTCCTAAGATCTTGAGATAGTAGATGAGATTTGACTAAATGTAGCTATTTGGATCCATTTAATGTTGTAGCAAGTAGATCAATTATGATTAGGGGTGTTTGTGGAGATGGGTCAAACCGATCAACTCATTGTGACACAAATTATGGATTTCTTGGATTTGTTATTTTGTGAATGTAGCTTAAGACATGGATTTAAGTGTGTAATTTAAGTGTTGAATAGGAAAAATATTTCAATTTAGTTCAATTGTCATAATTTAAAGTTATAACATTTTATATATTAAGTGAGAGTTTTCCTAAAATAAAATGTTATGAAGTTACTTTCTTATTGAAAATTTTAAAAGATGTTTATGCCACTTGACCCAAACCTATCCACGTAATATTTTGGATTTGACAAAAAAAATGTAGGTTTGACCCAACTCGTTCAAGATAATATAGTTAGTCCATATAATGAATTTATATTCAACCTGGTTAGTGTAGACCACTAGCATTATTTTGTGATTTTGCAAAAACTACATGTCTTTTTAGTAGTAGCAAAGTGAATTTGTCGCAGTTACAATGGTTCATCGAAAATTTGATAAAATCTACTCTGCTATACCATATATGTATTATACAAATTTTGCAAATTCACGATGGCTTAGGTTAATTTCGACAAATCCACCGTAACACTGTTAAAAAAGGTAAGATGGCCACTAGAGCAATGGCCTTGTGCATGTGTCAGTCGAGCTCATGGGTTGGGACCTATATGGTTCAATATATAGTAAGAAGATATTTATGAATGACTAATTGTAATAACCACAACCACTATTCAAATGGATTATGTTGCAATCATGTTAAATGGTGTGGGGGAAATTGACTTTTGGGGACCAAAGGGACCATTCCTAATATGTAGTAGTAATATATCAATTATAGTCAAGATTGCACTGGACCATGCTCATTGAAAAAACATTTATTCTATTCACCTAAACATCTAAGAAAATATGTCATTTTTTCCCACAAACTTTTGTTGGTATAATAAATGAAGAAGTGCATGCTTAGTGAAACAATTTCTATGCAATATAATTATCCAATTTGAAAGTATTATTTATCACCATTTTTTGTTTTTTATATATGCAGGATTTGAAACATCAAAACATGCATGCTGTGGTCAAGGACCATACAATGGAGTTGGACTATGTACTCCAGCTTCTAACTTGTGCCCTAATAGGGATCTTTATGCATTTTGGGACCCCTTTCATCCATCAGAAAGAGCCAATAGACTAATCGTTGATAAATTTATGACTGGAACTACCGATTACATGCACCCATATAATCTTAGTACACTTATTGCTATGGATTCTATGACCTAA
Protein sequence

>MS.gene037695.t1

MNIIPSIFLCVLITLSIGVQQIEARAFFVFGDSLVDNGNNNFLATTARADSYPYGIDSQTHRASGRFSNGLNMPDLISEKIGSEPTLPYLSPELDGERLLNGANFASAGIGILNDTGVQFINIIRITAQLAYFKQYQQRVSALIGESEAQKLVNQALTLITLGGNDFVNNYYLVPYSARSREYALPDYVVFLISEYRKILMNLYELGARRVLVTGTGPLGCVPAELAMQGRNGECGVPLQTATNLFNPQLVQLINQLNAEIGGPNHVFIYANAFAMHLDFVSNPQAYGFETSKHACCGQGPYNGVGLCTPASNLCPNRDLYAFWDPFHPSERANRLIVDKFMTGTTDYMHPYNLSTLIAMDSMT