AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038119

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038119.t1 MTR_5g071860 91.645 754 29 1 1 720 1 754 0.0 1421
MS.gene038119.t1 MTR_5g071630 88.147 734 39 4 21 720 6 725 0.0 1306
MS.gene038119.t1 MTR_5g071827 91.141 666 25 1 89 720 1 666 0.0 1251
MS.gene038119.t1 MTR_6g033165 51.248 761 305 4 26 720 59 819 0.0 795
MS.gene038119.t1 MTR_5g034500 50.192 781 320 6 8 720 3 782 0.0 785
MS.gene038119.t1 MTR_6g007697 51.226 775 315 7 8 720 3 776 0.0 781
MS.gene038119.t1 MTR_3g094090 49.616 782 310 12 18 718 14 792 0.0 760
MS.gene038119.t1 MTR_8g099090 44.000 800 360 9 1 720 1 792 0.0 679
MS.gene038119.t1 MTR_2g438150 44.341 751 367 6 18 720 42 789 0.0 655
MS.gene038119.t1 MTR_2g438150 44.370 746 364 6 18 715 42 784 0.0 651
MS.gene038119.t1 MTR_4g094660 44.341 751 365 6 18 720 42 787 0.0 636
MS.gene038119.t1 MTR_8g063840 42.520 762 380 7 15 720 81 840 0.0 603
MS.gene038119.t1 MTR_7g108480 39.234 757 397 9 2 720 42 773 0.0 573
MS.gene038119.t1 MTR_8g107510 40.996 783 378 15 10 717 6 779 0.0 569
MS.gene038119.t1 MTR_2g008820 38.571 770 407 7 11 720 86 849 0.0 568
MS.gene038119.t1 MTR_2g438160 48.319 565 255 2 34 564 58 619 0.0 557
MS.gene038119.t1 MTR_3g094090 46.305 609 245 10 190 718 1 607 0.0 548
MS.gene038119.t1 MTR_4g099260 38.705 757 396 8 26 720 65 815 0.0 547
MS.gene038119.t1 MTR_8g063900 37.968 748 371 9 13 720 51 745 1.78e-180 533
MS.gene038119.t1 MTR_8g022130 38.639 735 382 10 26 720 61 766 6.99e-176 522
MS.gene038119.t1 MTR_5g070670 37.339 774 411 8 11 720 86 849 7.71e-173 517
MS.gene038119.t1 MTR_8g088200 36.611 773 399 10 19 720 30 782 9.45e-170 507
MS.gene038119.t1 MTR_4g094660 42.952 603 294 5 166 720 1 601 2.65e-165 489
MS.gene038119.t1 MTR_5g034590 35.366 246 138 3 426 671 125 349 5.20e-47 171
MS.gene038119.t1 MTR_5g034590 45.349 86 42 1 88 168 5 90 9.79e-14 73.9
MS.gene038119.t1 MTR_8g022160 52.663 169 72 4 25 192 60 221 2.60e-46 166
MS.gene038119.t1 MTR_1g029310 33.333 126 77 2 176 301 12 130 2.68e-17 79.3
MS.gene038119.t1 MTR_6g045057 32.051 156 99 3 181 333 8 159 2.46e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038119.t1 AT2G30070 64.987 754 188 3 1 720 1 712 0.0 1011
MS.gene038119.t1 AT2G30070 61.769 633 166 3 122 720 2 592 0.0 806
MS.gene038119.t1 AT1G70300 51.720 785 302 10 8 720 3 782 0.0 785
MS.gene038119.t1 AT5G14880 51.429 770 308 8 17 720 12 781 0.0 766
MS.gene038119.t1 AT3G02050 49.810 789 327 6 1 720 1 789 0.0 763
MS.gene038119.t1 AT2G40540 48.843 778 321 6 18 718 15 792 0.0 758
MS.gene038119.t1 AT2G40540 48.843 778 321 6 18 718 15 792 0.0 758
MS.gene038119.t1 AT2G40540 48.843 778 321 6 18 718 15 792 0.0 758
MS.gene038119.t1 AT2G40540 48.843 778 321 6 18 718 15 792 0.0 758
MS.gene038119.t1 AT2G40540 48.843 778 321 6 18 718 15 792 0.0 758
MS.gene038119.t1 AT4G23640 45.537 773 350 6 18 720 4 775 0.0 696
MS.gene038119.t1 AT4G19960 44.356 753 350 6 30 720 62 807 0.0 629
MS.gene038119.t1 AT1G31120 43.286 767 352 7 18 720 49 796 0.0 622
MS.gene038119.t1 AT4G19960 43.563 769 349 7 30 720 62 823 0.0 620
MS.gene038119.t1 AT1G60160 42.593 756 386 9 11 720 74 827 0.0 619
MS.gene038119.t1 AT4G19960 42.875 779 350 7 30 720 62 833 0.0 616
MS.gene038119.t1 AT2G35060 43.014 730 370 6 34 720 66 792 0.0 616
MS.gene038119.t1 AT2G35060 43.014 730 370 6 34 720 66 792 0.0 616
MS.gene038119.t1 AT2G35060 43.014 730 370 6 34 720 66 792 0.0 616
MS.gene038119.t1 AT2G35060 42.955 731 370 7 34 720 66 793 0.0 611
MS.gene038119.t1 AT4G13420 39.660 764 406 10 2 720 32 785 0.0 588
MS.gene038119.t1 AT4G33530 39.244 767 407 9 11 720 91 855 0.0 539
MS.gene038119.t1 AT5G09400 38.163 773 411 8 11 720 90 858 9.93e-179 532
MS.gene038119.t1 AT4G19960 43.101 587 268 5 196 720 4 586 2.77e-162 481
MS.gene038119.t1 AT4G33530 38.274 614 323 7 163 720 14 627 1.25e-143 434

Find 131 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCATCATCTTCTTTA+AGG 0.071012 5.1:+71396288 None:intergenic
TATTCCAAATTTCTTTAAAA+TGG 0.164431 5.1:+71392555 None:intergenic
GTCAATTCATTTGTTTGTTC+TGG 0.193129 5.1:+71392805 None:intergenic
ATTAATATCCAATTGATTTC+TGG 0.209276 5.1:+71393895 None:intergenic
AAAATGAAAGAGAGCGAAAT+TGG 0.233599 5.1:+71393249 None:intergenic
GAGTGCTTTCATTTATCTTC+TGG 0.238376 5.1:-71396259 MS.gene038119:CDS
TCATCTGTTGGTTGCTGATT+AGG 0.240442 5.1:+71395764 None:intergenic
ATAAGTAACACCTGATTCTT+TGG 0.245477 5.1:+71392618 None:intergenic
CTGCAATGACTCGACTTTAT+AGG 0.258661 5.1:+71392651 None:intergenic
AGTATATCCGTGCCTGATTT+TGG 0.260994 5.1:-71394247 MS.gene038119:CDS
CAAAGATTAACAGTCCTTTC+TGG 0.261123 5.1:+71395654 None:intergenic
TTTCTGCAGAAGCTGTATTT+TGG 0.274753 5.1:-71394074 MS.gene038119:intron
TCCTACAACAGCAGCAAAAT+TGG 0.284343 5.1:+71394035 None:intergenic
CGAAGGAGTTCTACATGTTT+TGG 0.288826 5.1:-71392933 MS.gene038119:CDS
TTTCACCAGTCTATATGTTT+AGG 0.299827 5.1:-71394620 MS.gene038119:CDS
GGAGTTGTGCTTTCAATAAC+AGG 0.310143 5.1:-71394555 MS.gene038119:intron
AAAAGCCATGCTGCAACAAC+TGG 0.319980 5.1:+71394705 None:intergenic
TGTTGGCCATCACATGAAAA+TGG 0.333547 5.1:+71392688 None:intergenic
ATTGGGATCCATCCTCCTTC+AGG 0.341677 5.1:+71393267 None:intergenic
TAGCTGTCACAATTGGCCTT+AGG 0.357454 5.1:-71393861 MS.gene038119:CDS
CTTTGTTTAGCTGTCACAAT+TGG 0.363159 5.1:-71393868 MS.gene038119:CDS
GTGATTACTCCTGCAATATC+AGG 0.363527 5.1:-71395596 MS.gene038119:intron
AACACACCTTGAAATTGAAT+TGG 0.363854 5.1:-71392735 MS.gene038119:CDS
CATACTTCTAGCAAAATATA+TGG 0.365015 5.1:-71393931 MS.gene038119:CDS
CTCAAAACCACTGGCATTGA+AGG 0.371128 5.1:-71394594 MS.gene038119:CDS
CTGTTAATCTTTGTTCTGTT+GGG 0.380410 5.1:-71395644 MS.gene038119:CDS
CTTTCACTTTCATTGACATA+AGG 0.382299 5.1:+71392979 None:intergenic
CAAAGTCTTGGAGTAGTCTA+TGG 0.389439 5.1:-71396368 MS.gene038119:CDS
TCAGGTGTTACTTATATAGT+TGG 0.390413 5.1:-71392610 MS.gene038119:CDS
TTTATGTTCCAGAAATCAAT+TGG 0.391774 5.1:-71393903 MS.gene038119:CDS
GTAATGTTCACATGGAACTA+TGG 0.394069 5.1:-71393219 MS.gene038119:CDS
ACTGTTAATCTTTGTTCTGT+TGG 0.397677 5.1:-71395645 MS.gene038119:CDS
CATACTTCTTTGCTAGAAGT+TGG 0.398742 5.1:-71392469 MS.gene038119:CDS
TTTCACTTTCATTGACATAA+GGG 0.402173 5.1:+71392980 None:intergenic
ATCAAAATACCTGATATTGC+AGG 0.415433 5.1:+71395587 None:intergenic
AGCTGTCACAATTGGCCTTA+GGG 0.426551 5.1:-71393860 MS.gene038119:CDS
ATGTGACCAATTCAATTTCA+AGG 0.426738 5.1:+71392729 None:intergenic
ACCGAAAATAGCCGGGATAC+CGG 0.432386 5.1:+71393071 None:intergenic
CACCCATGTATGCCAAAATC+AGG 0.434049 5.1:+71394235 None:intergenic
TGCACAGCATTGGCTTATGA+TGG 0.434606 5.1:+71393984 None:intergenic
AAGTGAATTCTTGCCTGGTA+TGG 0.436212 5.1:+71394158 None:intergenic
GTATACAAGACCTCATTCTC+AGG 0.441568 5.1:-71396320 MS.gene038119:CDS
CTGAAAATGAGACCGATTCC+TGG 0.448779 5.1:+71393105 None:intergenic
ATGGTCCGTGTCCCAGGAAT+CGG 0.452741 5.1:-71393117 MS.gene038119:CDS
GCTACTTCCAGCATAATATC+AGG 0.456200 5.1:+71392493 None:intergenic
TTAGGCATGGTCCGTGTCCC+AGG 0.459289 5.1:-71393123 MS.gene038119:CDS
AACATGATGGGTCATGCATA+TGG 0.464031 5.1:-71393832 MS.gene038119:intron
GTCATGTCTGCTGATGATAA+TGG 0.466473 5.1:-71396197 MS.gene038119:CDS
GTTTGGTTAGCTTACTGTCA+TGG 0.466721 5.1:+71394882 None:intergenic
AGGACTCGTCTTGAAGTTGT+TGG 0.469508 5.1:+71392671 None:intergenic
TTCTTTGCTAGAAGTTGGTA+TGG 0.472844 5.1:-71392464 MS.gene038119:CDS
CAGGTGTTACTTATATAGTT+GGG 0.474382 5.1:-71392609 MS.gene038119:CDS
AACAATTTAATGCACAGCAT+TGG 0.475035 5.1:+71393974 None:intergenic
GAAGGATGGTTGTCATTAAG+TGG 0.476467 5.1:-71394576 MS.gene038119:CDS
CATGATGTTGAATGGAGAAA+AGG 0.476995 5.1:+71394757 None:intergenic
AACAGTCCTTTCTGGAACCT+AGG 0.480876 5.1:+71395662 None:intergenic
AGATTAGTCATCAGCAGGAT+TGG 0.484310 5.1:-71392958 MS.gene038119:CDS
AAATTTACCAGCATTCCATC+AGG 0.485062 5.1:-71393037 MS.gene038119:CDS
ACTAACACCTGATGGAATGC+TGG 0.486728 5.1:+71393030 None:intergenic
GATATACTTGTCGGTTCCAT+CGG 0.487236 5.1:+71394649 None:intergenic
GCAGATAAATTCTCATCTGT+TGG 0.490212 5.1:+71395752 None:intergenic
TTGGGATCCATCCTCCTTCA+GGG 0.490733 5.1:+71393268 None:intergenic
TTGGGAACTTGCATGACAAT+TGG 0.496346 5.1:-71395626 MS.gene038119:CDS
ATAAAATGACCGAAAATAGC+CGG 0.499251 5.1:+71393063 None:intergenic
GTGAGCAAGATGTTATCCTT+AGG 0.504871 5.1:-71393153 MS.gene038119:CDS
AAATGAAAGAGAGCGAAATT+GGG 0.505248 5.1:+71393250 None:intergenic
TGTTCTACAAATTGCTCAGA+AGG 0.508451 5.1:+71396592 None:intergenic
CAGAAGATTCTGCTGATACA+TGG 0.509581 5.1:-71395721 MS.gene038119:CDS
AATGAATTGACTATAGATGA+TGG 0.510618 5.1:-71392793 MS.gene038119:CDS
TTTAGGTTTCTCAAAACCAC+TGG 0.512735 5.1:-71394603 MS.gene038119:CDS
TTAGCTTACTGTCATGGAGT+TGG 0.515817 5.1:+71394888 None:intergenic
TAATCTTGCTTCCGGTATCC+CGG 0.517669 5.1:-71393082 MS.gene038119:CDS
ACTCTAGCATACCAAAGTCT+TGG 0.519686 5.1:-71396380 MS.gene038119:CDS
CATAGACTACTCCAAGACTT+TGG 0.520654 5.1:+71396369 None:intergenic
GAGGTCTTGTATACATAAAG+AGG 0.520785 5.1:+71396329 None:intergenic
TCATGTATCAGAATTTAAAG+AGG 0.520819 5.1:-71396424 MS.gene038119:intron
GTGAAAGATTAGTCATCAGC+AGG 0.524208 5.1:-71392963 MS.gene038119:CDS
CAAAACATGTAGAACTCCTT+CGG 0.524395 5.1:+71392934 None:intergenic
CCTTAGGGATACAAACATGA+TGG 0.530819 5.1:-71393845 MS.gene038119:CDS
TGTTCTTTGAAAAGCACCCT+AGG 0.532742 5.1:-71395679 MS.gene038119:CDS
CAGAGAACCTGATATTATGC+TGG 0.533599 5.1:-71392500 MS.gene038119:CDS
GCTCAATTCCCCTGAGAATG+AGG 0.534422 5.1:+71396310 None:intergenic
TCTGAGCAATTTGTAGAACA+TGG 0.536455 5.1:-71396589 MS.gene038119:CDS
TGAAAATGAGACCGATTCCT+GGG 0.537425 5.1:+71393106 None:intergenic
ATAGTTCCATGTGAACATTA+CGG 0.537461 5.1:+71393221 None:intergenic
AACATAAATGTGGAAAATCT+CGG 0.537686 5.1:-71392766 MS.gene038119:CDS
CATGCCTAAGCATGGTCCTA+AGG 0.539255 5.1:+71393137 None:intergenic
TGATGTGGAAAACAAGGTCT+CGG 0.545639 5.1:-71393175 MS.gene038119:CDS
ATGTGTTCCATGATGTTGAA+TGG 0.546599 5.1:+71394749 None:intergenic
GCAAAGTCCCTGAAGGAGGA+TGG 0.548872 5.1:-71393275 MS.gene038119:CDS
CCATCATGTTTGTATCCCTA+AGG 0.550781 5.1:+71393845 None:intergenic
ACAGTCCTTTCTGGAACCTA+GGG 0.551879 5.1:+71395663 None:intergenic
TTATCCTTAGGACCATGCTT+AGG 0.552419 5.1:-71393141 MS.gene038119:CDS
CATCAGCAGGATTGGTCCGA+AGG 0.553089 5.1:-71392950 MS.gene038119:CDS
CCAATTTGATGTGGAAAACA+AGG 0.553303 5.1:-71393181 MS.gene038119:CDS
AGTTTCTACAAAGCCATACC+AGG 0.558577 5.1:-71394171 MS.gene038119:intron
TAAAATGACCGAAAATAGCC+GGG 0.558708 5.1:+71393064 None:intergenic
TATACAAGACCTCATTCTCA+GGG 0.567056 5.1:-71396319 MS.gene038119:CDS
GCATGTCTTTGTAACCGTAT+CGG 0.567297 5.1:+71392902 None:intergenic
AGAAACCTAAACATATAGAC+TGG 0.570041 5.1:+71394615 None:intergenic
AAAGCCATGCTGCAACAACT+GGG 0.580024 5.1:+71394706 None:intergenic
AAAGTGCACGATATACTTGT+CGG 0.583744 5.1:+71394640 None:intergenic
CGGATATACTAAACATGTGA+AGG 0.584321 5.1:+71394260 None:intergenic
AACAACTGGGGCAAACATGA+AGG 0.584606 5.1:+71394719 None:intergenic
GAAGAAACACCAATTTGATG+TGG 0.584893 5.1:-71393190 MS.gene038119:CDS
GGAGACAATGTATGCTGACA+TGG 0.585033 5.1:-71394413 MS.gene038119:CDS
AAACCACTGGCATTGAAGGA+TGG 0.591920 5.1:-71394590 MS.gene038119:CDS
TTGCCCCAGTTGTTGCAGCA+TGG 0.595472 5.1:-71394710 MS.gene038119:CDS
TGATGGAAGAAACATAAATG+TGG 0.597494 5.1:-71392776 MS.gene038119:CDS
TTATGGCCGTAATGTTCACA+TGG 0.605716 5.1:-71393227 MS.gene038119:CDS
GTCTGCAAAGTCCCTGAAGG+AGG 0.607712 5.1:-71393279 MS.gene038119:CDS
CAACCATCCTTCAATGCCAG+TGG 0.609172 5.1:+71394587 None:intergenic
CTTAGGGATACAAACATGAT+GGG 0.610422 5.1:-71393844 MS.gene038119:CDS
TCTGTCTGCAAAGTCCCTGA+AGG 0.615084 5.1:-71393282 MS.gene038119:CDS
GTATATACAATATATTCCGA+TGG 0.631291 5.1:-71394665 MS.gene038119:CDS
AAGCACCCTAGGTTCCAGAA+AGG 0.633339 5.1:-71395668 MS.gene038119:CDS
CTTAGGACCATGCTTAGGCA+TGG 0.633844 5.1:-71393136 MS.gene038119:CDS
GTATGAACAATCTTGACTCG+AGG 0.638636 5.1:+71393949 None:intergenic
ACACGGACCATGCCTAAGCA+TGG 0.638975 5.1:+71393129 None:intergenic
TGAGACCGATTCCTGGGACA+CGG 0.648319 5.1:+71393112 None:intergenic
ATGTATGCCAAAATCAGGCA+CGG 0.648736 5.1:+71394240 None:intergenic
TATAAGGTTAGAGTTATACA+TGG 0.650607 5.1:+71392437 None:intergenic
AGTTGGGCATTCCTATGCAG+AGG 0.666901 5.1:-71392593 MS.gene038119:CDS
ACTTGCATGACAATTGGTGA+TGG 0.676889 5.1:-71395620 MS.gene038119:CDS
AGAACATGGAATATCTCACC+AGG 0.679281 5.1:-71396575 MS.gene038119:intron
TCTGCTGATGATAATGGAGA+AGG 0.680990 5.1:-71396191 MS.gene038119:intron
CAATTGTGACAGCTAAACAA+AGG 0.683793 5.1:+71393869 None:intergenic
AAGCCATGCTGCAACAACTG+GGG 0.696949 5.1:+71394707 None:intergenic
TGTTGTCACAAACATAACAG+TGG 0.717093 5.1:+71393410 None:intergenic
GAGACAATGTATGCTGACAT+GGG 0.720378 5.1:-71394412 MS.gene038119:CDS
ATACAAGACCTCATTCTCAG+GGG 0.745915 5.1:-71396318 MS.gene038119:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATTTATGATAACTCT+AGG - chr5.1:71394934-71394953 MS.gene038119:intron 15.0%
!! TAAATTTAAACTACATTTCT+TGG - chr5.1:71395596-71395615 MS.gene038119:intron 15.0%
!! TATTATTTATGATAACTCTA+GGG - chr5.1:71394935-71394954 MS.gene038119:intron 15.0%
!! TTAACTAATTATCCTAATTA+AGG + chr5.1:71393169-71393188 None:intergenic 15.0%
!!! AAATCAAATGTTTTCATTTT+TGG + chr5.1:71393821-71393840 None:intergenic 15.0%
!!! ATTGATAACATAATTCTTTT+TGG + chr5.1:71393870-71393889 None:intergenic 15.0%
!!! TATTCCAAATTTCTTTAAAA+TGG + chr5.1:71396496-71396515 None:intergenic 15.0%
!! AAATAATATCGATATCTTTG+TGG + chr5.1:71394923-71394942 None:intergenic 20.0%
!! AATTTGTCATATAAAAGCTT+AGG - chr5.1:71392545-71392564 MS.gene038119:CDS 20.0%
!! ACACAATTTCATATTTGAAA+TGG + chr5.1:71392512-71392531 None:intergenic 20.0%
!! ATTATAATTGTTTGGAAACA+AGG - chr5.1:71395679-71395698 MS.gene038119:CDS 20.0%
!! CACTAGTAATTATAATTGTT+TGG - chr5.1:71395671-71395690 MS.gene038119:CDS 20.0%
!! TATTATCAATTTCTTATGCT+TGG - chr5.1:71392594-71392613 MS.gene038119:CDS 20.0%
!! TCAATTATAACTACTCATTA+AGG - chr5.1:71392960-71392979 MS.gene038119:CDS 20.0%
!! TTAGCTAAAGTTACAATTTA+AGG + chr5.1:71393925-71393944 None:intergenic 20.0%
!! TTATAATTGTTTGGAAACAA+GGG - chr5.1:71395680-71395699 MS.gene038119:CDS 20.0%
!!! ATTAATATCCAATTGATTTC+TGG + chr5.1:71395156-71395175 None:intergenic 20.0%
!!! CTCTTGAAACAATATATTTT+CGG + chr5.1:71394029-71394048 None:intergenic 20.0%
!!! GTCTTTTGTTTGTAATTTTA+TGG + chr5.1:71395453-71395472 None:intergenic 20.0%
!!! TCTTCCATTTTAAAGAAATT+TGG - chr5.1:71396489-71396508 MS.gene038119:intron 20.0%
! AAACTCACATAAAGGATATT+TGG - chr5.1:71393020-71393039 MS.gene038119:CDS 25.0%
! AACATAAATGTGGAAAATCT+CGG - chr5.1:71396282-71396301 MS.gene038119:CDS 25.0%
! AATGAATTGACTATAGATGA+TGG - chr5.1:71396255-71396274 MS.gene038119:CDS 25.0%
! ATTGTTTAATCTAAACACAG+TGG + chr5.1:71395256-71395275 None:intergenic 25.0%
! CATACTTCTAGCAAAATATA+TGG - chr5.1:71395117-71395136 MS.gene038119:intron 25.0%
! CTTTCTTATGTTCCTTAATT+AGG - chr5.1:71393154-71393173 MS.gene038119:CDS 25.0%
! GTATATACAATATATTCCGA+TGG - chr5.1:71394383-71394402 MS.gene038119:intron 25.0%
! TACAAACAAAAGACACTTTA+GGG - chr5.1:71395459-71395478 MS.gene038119:intron 25.0%
! TCATGTATCAGAATTTAAAG+AGG - chr5.1:71392624-71392643 MS.gene038119:CDS 25.0%
! TCATTATGATACTTGAAGTA+TGG - chr5.1:71395568-71395587 MS.gene038119:intron 25.0%
! TTAATAAGCTTAAAAGCCAA+AGG + chr5.1:71392934-71392953 None:intergenic 25.0%
! TTACAAACAAAAGACACTTT+AGG - chr5.1:71395458-71395477 MS.gene038119:intron 25.0%
! TTTATGTTCCAGAAATCAAT+TGG - chr5.1:71395145-71395164 MS.gene038119:intron 25.0%
! TTTCACTTTCATTGACATAA+GGG + chr5.1:71396071-71396090 None:intergenic 25.0%
! TTTCTTCATCATCTTCTTTA+AGG + chr5.1:71392763-71392782 None:intergenic 25.0%
!! AATATCCTTTATGTGAGTTT+TGG + chr5.1:71393020-71393039 None:intergenic 25.0%
!! CTGTCATCATTTTATTCATT+TGG + chr5.1:71393060-71393079 None:intergenic 25.0%
!! GAAGATGATGAAGAAATTTT+TGG - chr5.1:71392767-71392786 MS.gene038119:CDS 25.0%
!! TAATGGTAATGATAGAAGTT+TGG + chr5.1:71394186-71394205 None:intergenic 25.0%
!! TATGCTTTGAATAGACATAA+TGG + chr5.1:71394203-71394222 None:intergenic 25.0%
!!! ATGAAAACATTTGATTTTGC+AGG - chr5.1:71393824-71393843 MS.gene038119:intron 25.0%
!!! ATTTGTTGTACAACCAAATT+TGG + chr5.1:71394554-71394573 None:intergenic 25.0%
!!! ATTTTAAAAGCCAAAGAATC+AGG - chr5.1:71396420-71396439 MS.gene038119:intron 25.0%
!!! TGAAAACATTTGATTTTGCA+GGG - chr5.1:71393825-71393844 MS.gene038119:intron 25.0%
!!! TGACATTTTGACTAACTAAT+AGG + chr5.1:71394521-71394540 None:intergenic 25.0%
AAAATGAAAGAGAGCGAAAT+TGG + chr5.1:71395802-71395821 None:intergenic 30.0%
AAATGAAAGAGAGCGAAATT+GGG + chr5.1:71395801-71395820 None:intergenic 30.0%
AAATTGGCCACTATAAAAAC+TGG + chr5.1:71395000-71395019 None:intergenic 30.0%
AACAATTTAATGCACAGCAT+TGG + chr5.1:71395077-71395096 None:intergenic 30.0%
AACACACCTTGAAATTGAAT+TGG - chr5.1:71396313-71396332 MS.gene038119:CDS 30.0%
AATGGAAAAAAATGAGTACC+TGG + chr5.1:71392494-71392513 None:intergenic 30.0%
ACATCATAATATGATCTGAG+AGG + chr5.1:71393498-71393517 None:intergenic 30.0%
ACTGTTAATCTTTGTTCTGT+TGG - chr5.1:71393403-71393422 MS.gene038119:intron 30.0%
AGAAACCTAAACATATAGAC+TGG + chr5.1:71394436-71394455 None:intergenic 30.0%
ATAAAATGACCGAAAATAGC+CGG + chr5.1:71395988-71396007 None:intergenic 30.0%
ATACAAAAACTAACACCTGA+TGG + chr5.1:71396029-71396048 None:intergenic 30.0%
ATAGTTCCATGTGAACATTA+CGG + chr5.1:71395830-71395849 None:intergenic 30.0%
ATCAAAATACCTGATATTGC+AGG + chr5.1:71393464-71393483 None:intergenic 30.0%
ATCATAATATGATCTGAGAG+GGG + chr5.1:71393496-71393515 None:intergenic 30.0%
ATGATGTTTACTTCATGATG+TGG - chr5.1:71393511-71393530 MS.gene038119:intron 30.0%
ATGTGACCAATTCAATTTCA+AGG + chr5.1:71396322-71396341 None:intergenic 30.0%
CAAATCAAGAGAAATCTCTT+TGG - chr5.1:71393111-71393130 MS.gene038119:CDS 30.0%
CAATCTTCAATCATTGATGA+TGG - chr5.1:71392882-71392901 MS.gene038119:CDS 30.0%
CATCATAATATGATCTGAGA+GGG + chr5.1:71393497-71393516 None:intergenic 30.0%
CTGTTAATCTTTGTTCTGTT+GGG - chr5.1:71393404-71393423 MS.gene038119:intron 30.0%
CTTTCACTTTCATTGACATA+AGG + chr5.1:71396072-71396091 None:intergenic 30.0%
GTCAATTCATTTGTTTGTTC+TGG + chr5.1:71396246-71396265 None:intergenic 30.0%
TACTGAAATGAGACACAAAA+AGG + chr5.1:71394105-71394124 None:intergenic 30.0%
TGATGGAAGAAACATAAATG+TGG - chr5.1:71396272-71396291 MS.gene038119:CDS 30.0%
TTAGGGACATTATCATAACT+CGG - chr5.1:71395476-71395495 MS.gene038119:intron 30.0%
TTTCACCAGTCTATATGTTT+AGG - chr5.1:71394428-71394447 MS.gene038119:intron 30.0%
! ATTTTCAGTAATCTTGCTTC+CGG - chr5.1:71395958-71395977 MS.gene038119:intron 30.0%
! TGTTTACCATTTTCATGTGA+TGG - chr5.1:71396354-71396373 MS.gene038119:CDS 30.0%
!! ATTTTGGCCAGTTTTTATAG+TGG - chr5.1:71394990-71395009 MS.gene038119:intron 30.0%
!! GTCTCATGTATCATTTTAGT+TGG - chr5.1:71394268-71394287 MS.gene038119:intron 30.0%
!! TTCGCTCTCTTTCATTTTTA+TGG - chr5.1:71395804-71395823 MS.gene038119:CDS 30.0%
!! TTTTTCAGCACTCTCAATAA+AGG - chr5.1:71394662-71394681 MS.gene038119:CDS 30.0%
!!! ATCATTGATGATGGTACTTT+TGG - chr5.1:71392891-71392910 MS.gene038119:CDS 30.0%
AAAGTGCACGATATACTTGT+CGG + chr5.1:71394411-71394430 None:intergenic 35.0%
AAATTTACCAGCATTCCATC+AGG - chr5.1:71396011-71396030 MS.gene038119:intron 35.0%
ATGTGTTCCATGATGTTGAA+TGG + chr5.1:71394302-71394321 None:intergenic 35.0%
CAAAACATGTAGAACTCCTT+CGG + chr5.1:71396117-71396136 None:intergenic 35.0%
CAAAGATTAACAGTCCTTTC+TGG + chr5.1:71393397-71393416 None:intergenic 35.0%
CAATTGTGACAGCTAAACAA+AGG + chr5.1:71395182-71395201 None:intergenic 35.0%
CAGGTACAGAACTTTGTATA+AGG + chr5.1:71394057-71394076 None:intergenic 35.0%
CATACTTCTTTGCTAGAAGT+TGG - chr5.1:71396579-71396598 MS.gene038119:CDS 35.0%
CATATTTATCCTCCATGGAA+CGG + chr5.1:71393557-71393576 None:intergenic 35.0%
CATGATGTTGAATGGAGAAA+AGG + chr5.1:71394294-71394313 None:intergenic 35.0%
CCAATTTGATGTGGAAAACA+AGG - chr5.1:71395867-71395886 MS.gene038119:intron 35.0%
CGGATATACTAAACATGTGA+AGG + chr5.1:71394791-71394810 None:intergenic 35.0%
CGGTTTAAAAAAGCTGATGT+TGG + chr5.1:71393781-71393800 None:intergenic 35.0%
CTTACATGTTTCCTGTTGTT+TGG - chr5.1:71395715-71395734 MS.gene038119:CDS 35.0%
CTTAGGGATACAAACATGAT+GGG - chr5.1:71395204-71395223 MS.gene038119:intron 35.0%
GAAATGAGACACAAAAAGGA+TGG + chr5.1:71394101-71394120 None:intergenic 35.0%
GAAGAAACACCAATTTGATG+TGG - chr5.1:71395858-71395877 MS.gene038119:intron 35.0%
GAGTGCTTTCATTTATCTTC+TGG - chr5.1:71392789-71392808 MS.gene038119:CDS 35.0%
GCAGATAAATTCTCATCTGT+TGG + chr5.1:71393299-71393318 None:intergenic 35.0%
GTAATGTTCACATGGAACTA+TGG - chr5.1:71395829-71395848 MS.gene038119:intron 35.0%
GTTCAATAGATCCAAACAAC+AGG + chr5.1:71395729-71395748 None:intergenic 35.0%
TAAAAATGAGGAGATAGACG+TGG - chr5.1:71393635-71393654 MS.gene038119:intron 35.0%
TAAAATGACCGAAAATAGCC+GGG + chr5.1:71395987-71396006 None:intergenic 35.0%
TAGCTCACTATCATCAAATG+TGG - chr5.1:71393700-71393719 MS.gene038119:intron 35.0%
TATACAAGACCTCATTCTCA+GGG - chr5.1:71392729-71392748 MS.gene038119:CDS 35.0%
TCACGAAGATTGTCCAAATT+TGG - chr5.1:71394538-71394557 MS.gene038119:intron 35.0%
TCTGAGCAATTTGTAGAACA+TGG - chr5.1:71392459-71392478 MS.gene038119:CDS 35.0%
TCTTAAAGTGAATTCTTGCC+TGG + chr5.1:71394898-71394917 None:intergenic 35.0%
TGAACACGTCAGTAAAAATG+AGG - chr5.1:71393623-71393642 MS.gene038119:intron 35.0%
TGTTCTACAAATTGCTCAGA+AGG + chr5.1:71392459-71392478 None:intergenic 35.0%
TGTTGTCACAAACATAACAG+TGG + chr5.1:71395641-71395660 None:intergenic 35.0%
TTCAGCCAAAACTCACATAA+AGG - chr5.1:71393012-71393031 MS.gene038119:CDS 35.0%
TTCCTATGTGATACCATCTT+AGG - chr5.1:71394609-71394628 MS.gene038119:CDS 35.0%
TTGTTCACTTATTGTACTGC+AGG - chr5.1:71393206-71393225 MS.gene038119:CDS 35.0%
! CTTTGTTTAGCTGTCACAAT+TGG - chr5.1:71395180-71395199 MS.gene038119:intron 35.0%
! CTTTTCTCCATTCAACATCA+TGG - chr5.1:71394292-71394311 MS.gene038119:intron 35.0%
! CTTTTGTGTATCAGTGGTAT+TGG - chr5.1:71394361-71394380 MS.gene038119:intron 35.0%
! GAGGTCTTGTATACATAAAG+AGG + chr5.1:71392722-71392741 None:intergenic 35.0%
! TCAGTATTTTCAGCAGTTTC+AGG - chr5.1:71394119-71394138 MS.gene038119:intron 35.0%
! TCATTTTCCCTAAATGTGTG+AGG + chr5.1:71395528-71395547 None:intergenic 35.0%
! TTTAGGTTTCTCAAAACCAC+TGG - chr5.1:71394445-71394464 MS.gene038119:intron 35.0%
! TTTCTGCAGAAGCTGTATTT+TGG - chr5.1:71394974-71394993 MS.gene038119:intron 35.0%
!! AACTACATTTCTTGGTTTGC+AGG - chr5.1:71395604-71395623 MS.gene038119:CDS 35.0%
!! ACTACATTTCTTGGTTTGCA+GGG - chr5.1:71395605-71395624 MS.gene038119:CDS 35.0%
!! TAAACCGAAAGTTGATGTCA+GGG - chr5.1:71393794-71393813 MS.gene038119:intron 35.0%
!! TTAAACCGAAAGTTGATGTC+AGG - chr5.1:71393793-71393812 MS.gene038119:intron 35.0%
!! TTCTTTGCTAGAAGTTGGTA+TGG - chr5.1:71396584-71396603 MS.gene038119:CDS 35.0%
!!! CCTTGTTTTCCACATCAAAT+TGG + chr5.1:71395870-71395889 None:intergenic 35.0%
!!! TCAAATGTGGTTTTGACATG+CGG - chr5.1:71393713-71393732 MS.gene038119:intron 35.0%
!!! TGATTTTTTTGCCTCTGCAT+AGG + chr5.1:71396469-71396488 None:intergenic 35.0%
AAAGCTGATGTTGGAAACAG+AGG + chr5.1:71393772-71393791 None:intergenic 40.0%
AAGTGAATTCTTGCCTGGTA+TGG + chr5.1:71394893-71394912 None:intergenic 40.0%
ACTCTAGCATACCAAAGTCT+TGG - chr5.1:71392668-71392687 MS.gene038119:CDS 40.0%
ACTTGCATGACAATTGGTGA+TGG - chr5.1:71393428-71393447 MS.gene038119:intron 40.0%
AGAACATGGAATATCTCACC+AGG - chr5.1:71392473-71392492 MS.gene038119:CDS 40.0%
AGTAAATGACATCCGTTCCA+TGG - chr5.1:71393542-71393561 MS.gene038119:intron 40.0%
AGTTTCTACAAAGCCATACC+AGG - chr5.1:71394877-71394896 MS.gene038119:intron 40.0%
ATACAAGACCTCATTCTCAG+GGG - chr5.1:71392730-71392749 MS.gene038119:CDS 40.0%
ATGTATGCCAAAATCAGGCA+CGG + chr5.1:71394811-71394830 None:intergenic 40.0%
ATGTGATACCATCTTAGGTG+TGG - chr5.1:71394614-71394633 MS.gene038119:CDS 40.0%
CAAAGTCTTGGAGTAGTCTA+TGG - chr5.1:71392680-71392699 MS.gene038119:CDS 40.0%
CACCTAAGATGGTATCACAT+AGG + chr5.1:71394614-71394633 None:intergenic 40.0%
CAGAAGATTCTGCTGATACA+TGG - chr5.1:71393327-71393346 MS.gene038119:intron 40.0%
CAGAGAACCTGATATTATGC+TGG - chr5.1:71396548-71396567 MS.gene038119:intron 40.0%
CAGCTTCTGCAGAAAAATAG+TGG + chr5.1:71394969-71394988 None:intergenic 40.0%
CATAGACTACTCCAAGACTT+TGG + chr5.1:71392682-71392701 None:intergenic 40.0%
CCACATGTCAACACCATATT+GGG - chr5.1:71393577-71393596 MS.gene038119:intron 40.0%
CCATCATGTTTGTATCCCTA+AGG + chr5.1:71395206-71395225 None:intergenic 40.0%
CCTTAGGGATACAAACATGA+TGG - chr5.1:71395203-71395222 MS.gene038119:intron 40.0%
CTGCAATGACTCGACTTTAT+AGG + chr5.1:71396400-71396419 None:intergenic 40.0%
GAAGGATGGTTGTCATTAAG+TGG - chr5.1:71394472-71394491 MS.gene038119:intron 40.0%
GACTAACATGAACATCAGCA+CGG + chr5.1:71393679-71393698 None:intergenic 40.0%
GAGACAATGTATGCTGACAT+GGG - chr5.1:71394636-71394655 MS.gene038119:CDS 40.0%
GATTACGCCTCACACATTTA+GGG - chr5.1:71395518-71395537 MS.gene038119:intron 40.0%
GCATGTCTTTGTAACCGTAT+CGG + chr5.1:71396149-71396168 None:intergenic 40.0%
GCTACTTCCAGCATAATATC+AGG + chr5.1:71396558-71396577 None:intergenic 40.0%
GGAGTTGTGCTTTCAATAAC+AGG - chr5.1:71394493-71394512 MS.gene038119:intron 40.0%
GTATACAAGACCTCATTCTC+AGG - chr5.1:71392728-71392747 MS.gene038119:CDS 40.0%
GTCATGTCTGCTGATGATAA+TGG - chr5.1:71392851-71392870 MS.gene038119:CDS 40.0%
GTGAGCAAGATGTTATCCTT+AGG - chr5.1:71395895-71395914 MS.gene038119:intron 40.0%
GTGATTACTCCTGCAATATC+AGG - chr5.1:71393452-71393471 MS.gene038119:intron 40.0%
GTGTCTTCAAGTAGTCAACT+TGG - chr5.1:71395426-71395445 MS.gene038119:intron 40.0%
GTGTGTCTTATCAGTTCCTT+TGG - chr5.1:71392915-71392934 MS.gene038119:CDS 40.0%
TCCTACAACAGCAGCAAAAT+TGG + chr5.1:71395016-71395035 None:intergenic 40.0%
TGATGTGGAAAACAAGGTCT+CGG - chr5.1:71395873-71395892 MS.gene038119:intron 40.0%
TGATTACGCCTCACACATTT+AGG - chr5.1:71395517-71395536 MS.gene038119:intron 40.0%
TGTGGCATATTTATCCTCCA+TGG + chr5.1:71393562-71393581 None:intergenic 40.0%
TGTTGGCCATCACATGAAAA+TGG + chr5.1:71396363-71396382 None:intergenic 40.0%
TTAGCTTACTGTCATGGAGT+TGG + chr5.1:71394163-71394182 None:intergenic 40.0%
TTATCCTTAGGACCATGCTT+AGG - chr5.1:71395907-71395926 MS.gene038119:intron 40.0%
TTATGGCCGTAATGTTCACA+TGG - chr5.1:71395821-71395840 MS.gene038119:CDS 40.0%
TTCACTTATTGTACTGCAGG+AGG - chr5.1:71393209-71393228 MS.gene038119:CDS 40.0%
TTGGGAACTTGCATGACAAT+TGG - chr5.1:71393422-71393441 MS.gene038119:CDS 40.0%
! AGATTAGTCATCAGCAGGAT+TGG - chr5.1:71396090-71396109 MS.gene038119:intron 40.0%
! AGTATATCCGTGCCTGATTT+TGG - chr5.1:71394801-71394820 MS.gene038119:intron 40.0%
! CGAAGGAGTTCTACATGTTT+TGG - chr5.1:71396115-71396134 MS.gene038119:intron 40.0%
! GACAGCGCTTAACACATTTT+AGG + chr5.1:71395288-71395307 None:intergenic 40.0%
! GTATGAACAATCTTGACTCG+AGG + chr5.1:71395102-71395121 None:intergenic 40.0%
! GTGAAAGATTAGTCATCAGC+AGG - chr5.1:71396085-71396104 MS.gene038119:intron 40.0%
! TCATCTGTTGGTTGCTGATT+AGG + chr5.1:71393287-71393306 None:intergenic 40.0%
! TGAAAATGAGACCGATTCCT+GGG + chr5.1:71395945-71395964 None:intergenic 40.0%
! TGTGTCACTATCACCCAATA+TGG + chr5.1:71393593-71393612 None:intergenic 40.0%
!! AACATGATGGGTCATGCATA+TGG - chr5.1:71395216-71395235 MS.gene038119:intron 40.0%
!! GATATACTTGTCGGTTCCAT+CGG + chr5.1:71394402-71394421 None:intergenic 40.0%
!! GTTTGGTTAGCTTACTGTCA+TGG + chr5.1:71394169-71394188 None:intergenic 40.0%
!! TCTGCTGATGATAATGGAGA+AGG - chr5.1:71392857-71392876 MS.gene038119:CDS 40.0%
!! TGCCTGATTTTGGCATACAT+GGG - chr5.1:71394811-71394830 MS.gene038119:intron 40.0%
!! TGTTCTTTGAAAAGCACCCT+AGG - chr5.1:71393369-71393388 MS.gene038119:intron 40.0%
!! TTTTGGTGCATTGTCCGATA+CGG - chr5.1:71396132-71396151 MS.gene038119:intron 40.0%
AAAAGCCATGCTGCAACAAC+TGG + chr5.1:71394346-71394365 None:intergenic 45.0%
AAAGCCATGCTGCAACAACT+GGG + chr5.1:71394345-71394364 None:intergenic 45.0%
AAATGACATCCGTTCCATGG+AGG - chr5.1:71393545-71393564 MS.gene038119:intron 45.0%
AACAACTGGGGCAAACATGA+AGG + chr5.1:71394332-71394351 None:intergenic 45.0%
ACACACCATCATGTCCATGT+AGG + chr5.1:71393748-71393767 None:intergenic 45.0%
ACTAACACCTGATGGAATGC+TGG + chr5.1:71396021-71396040 None:intergenic 45.0%
AGGACTCGTCTTGAAGTTGT+TGG + chr5.1:71396380-71396399 None:intergenic 45.0%
AGGATGGTCATAGACCGAAA+CGG + chr5.1:71394085-71394104 None:intergenic 45.0%
ATAGACCGAAACGGACAAAC+AGG + chr5.1:71394076-71394095 None:intergenic 45.0%
CACCCATGTATGCCAAAATC+AGG + chr5.1:71394816-71394835 None:intergenic 45.0%
CATTGTCTCCACACCTAAGA+TGG + chr5.1:71394625-71394644 None:intergenic 45.0%
CTGTACCTGTTTGTCCGTTT+CGG - chr5.1:71394068-71394087 MS.gene038119:CDS 45.0%
GCCACATGTCAACACCATAT+TGG - chr5.1:71393576-71393595 MS.gene038119:intron 45.0%
GGAGACAATGTATGCTGACA+TGG - chr5.1:71394635-71394654 MS.gene038119:CDS 45.0%
GTCATCCTACATGGACATGA+TGG - chr5.1:71393740-71393759 MS.gene038119:intron 45.0%
TAATCTTGCTTCCGGTATCC+CGG - chr5.1:71395966-71395985 MS.gene038119:intron 45.0%
TGGTCCCTGACATCAACTTT+CGG + chr5.1:71393801-71393820 None:intergenic 45.0%
! AAACCACTGGCATTGAAGGA+TGG - chr5.1:71394458-71394477 MS.gene038119:intron 45.0%
! CTCAAAACCACTGGCATTGA+AGG - chr5.1:71394454-71394473 MS.gene038119:intron 45.0%
! CTGAAAATGAGACCGATTCC+TGG + chr5.1:71395946-71395965 None:intergenic 45.0%
! GCATGGCTTTTGTGTATCAG+TGG - chr5.1:71394355-71394374 MS.gene038119:intron 45.0%
! GCCAATTTTGCTGCTGTTGT+AGG - chr5.1:71395012-71395031 MS.gene038119:intron 45.0%
!! AACAGTCCTTTCTGGAACCT+AGG + chr5.1:71393389-71393408 None:intergenic 45.0%
!! ACAGTCCTTTCTGGAACCTA+GGG + chr5.1:71393388-71393407 None:intergenic 45.0%
!! AGCTGTCACAATTGGCCTTA+GGG - chr5.1:71395188-71395207 MS.gene038119:intron 45.0%
!! CATTTCTTGGTTTGCAGGGT+TGG - chr5.1:71395609-71395628 MS.gene038119:CDS 45.0%
!! CCCAATATGGTGTTGACATG+TGG + chr5.1:71393580-71393599 None:intergenic 45.0%
!! GATTTTGGCATACATGGGTG+AGG - chr5.1:71394816-71394835 MS.gene038119:intron 45.0%
!! GTGCCTGATTTTGGCATACA+TGG - chr5.1:71394810-71394829 MS.gene038119:intron 45.0%
!! TAGCTGTCACAATTGGCCTT+AGG - chr5.1:71395187-71395206 MS.gene038119:intron 45.0%
!! TGCACAGCATTGGCTTATGA+TGG + chr5.1:71395067-71395086 None:intergenic 45.0%
AAGCACCCTAGGTTCCAGAA+AGG - chr5.1:71393380-71393399 MS.gene038119:intron 50.0%
AAGCCATGCTGCAACAACTG+GGG + chr5.1:71394344-71394363 None:intergenic 50.0%
ACCGAAAATAGCCGGGATAC+CGG + chr5.1:71395980-71395999 None:intergenic 50.0%
AGTTGGGCATTCCTATGCAG+AGG - chr5.1:71396455-71396474 MS.gene038119:intron 50.0%
ATTGGGATCCATCCTCCTTC+AGG + chr5.1:71395784-71395803 None:intergenic 50.0%
CAACCATCCTTCAATGCCAG+TGG + chr5.1:71394464-71394483 None:intergenic 50.0%
CATGCCTAAGCATGGTCCTA+AGG + chr5.1:71395914-71395933 None:intergenic 50.0%
CTTAGGACCATGCTTAGGCA+TGG - chr5.1:71395912-71395931 MS.gene038119:intron 50.0%
GCTCAATTCCCCTGAGAATG+AGG + chr5.1:71392741-71392760 None:intergenic 50.0%
TCTGTCTGCAAAGTCCCTGA+AGG - chr5.1:71395766-71395785 MS.gene038119:CDS 50.0%
TGCGGCATTGTCATCCTACA+TGG - chr5.1:71393731-71393750 MS.gene038119:intron 50.0%
TTGGGATCCATCCTCCTTCA+GGG + chr5.1:71395783-71395802 None:intergenic 50.0%
!! TCCGGTATCCCGGCTATTTT+CGG - chr5.1:71395976-71395995 MS.gene038119:intron 50.0%
ACACGGACCATGCCTAAGCA+TGG + chr5.1:71395922-71395941 None:intergenic 55.0%
ATGGTCCGTGTCCCAGGAAT+CGG - chr5.1:71395931-71395950 MS.gene038119:intron 55.0%
CGTGGCATATCAGCTCCATG+TGG - chr5.1:71393653-71393672 MS.gene038119:intron 55.0%
GCAAAGTCCCTGAAGGAGGA+TGG - chr5.1:71395773-71395792 MS.gene038119:CDS 55.0%
GTCTGCAAAGTCCCTGAAGG+AGG - chr5.1:71395769-71395788 MS.gene038119:CDS 55.0%
TGAACATCAGCACGGCCACA+TGG + chr5.1:71393671-71393690 None:intergenic 55.0%
TTGCCCCAGTTGTTGCAGCA+TGG - chr5.1:71394338-71394357 MS.gene038119:intron 55.0%
! TGAGACCGATTCCTGGGACA+CGG + chr5.1:71395939-71395958 None:intergenic 55.0%
!! CATCAGCAGGATTGGTCCGA+AGG - chr5.1:71396098-71396117 MS.gene038119:intron 55.0%
TTAGGCATGGTCCGTGTCCC+AGG - chr5.1:71395925-71395944 MS.gene038119:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 71392450 71396620 71392450 ID=MS.gene038119
chr5.1 mRNA 71392450 71396620 71392450 ID=MS.gene038119.t1;Parent=MS.gene038119
chr5.1 exon 71396576 71396620 71396576 ID=MS.gene038119.t1.exon1;Parent=MS.gene038119.t1
chr5.1 CDS 71396576 71396620 71396576 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71396192 71396435 71396192 ID=MS.gene038119.t1.exon2;Parent=MS.gene038119.t1
chr5.1 CDS 71396192 71396435 71396192 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71395597 71395842 71395597 ID=MS.gene038119.t1.exon3;Parent=MS.gene038119.t1
chr5.1 CDS 71395597 71395842 71395597 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71394897 71394947 71394897 ID=MS.gene038119.t1.exon4;Parent=MS.gene038119.t1
chr5.1 CDS 71394897 71394947 71394897 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71394556 71394816 71394556 ID=MS.gene038119.t1.exon5;Parent=MS.gene038119.t1
chr5.1 CDS 71394556 71394816 71394556 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71394387 71394439 71394387 ID=MS.gene038119.t1.exon6;Parent=MS.gene038119.t1
chr5.1 CDS 71394387 71394439 71394387 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71394172 71394286 71394172 ID=MS.gene038119.t1.exon7;Parent=MS.gene038119.t1
chr5.1 CDS 71394172 71394286 71394172 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71393833 71394087 71393833 ID=MS.gene038119.t1.exon8;Parent=MS.gene038119.t1
chr5.1 CDS 71393833 71394087 71393833 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71393409 71393444 71393409 ID=MS.gene038119.t1.exon9;Parent=MS.gene038119.t1
chr5.1 CDS 71393409 71393444 71393409 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
chr5.1 exon 71392450 71393306 71392450 ID=MS.gene038119.t1.exon10;Parent=MS.gene038119.t1
chr5.1 CDS 71392450 71393306 71392450 ID=cds.MS.gene038119.t1;Parent=MS.gene038119.t1
Gene Sequence

>MS.gene038119

ATGAATCCTTCTGAGCAATTTGTAGAACATGGAATATCTCACCAGGTACTCATTTTTTTCCATTTCAAATATGAAATTGTGTATACTGTATTATTAATTTGTCATATAAAAGCTTAGGAAAATTAAATGTGTGTAGATAATATATATTATCAATTTCTTATGCTTGGTTTCATTTCATGTATCAGAATTTAAAGAGGACATCTTGTGCAAATGTGCTGACTCTAGCATACCAAAGTCTTGGAGTAGTCTATGGTGACTTAAGCACTTCTCCTCTTTATGTATACAAGACCTCATTCTCAGGGGAATTGAGCCTTAAAGAAGATGATGAAGAAATTTTTGGAGTGCTTTCATTTATCTTCTGGACATTTACTATTATTGCTCTCTTCAAATATGTGTTCATTGTCATGTCTGCTGATGATAATGGAGAAGGTACAATCTTCAATCATTGATGATGGTACTTTTGGTGTGTGTCTTATCAGTTCCTTTGGCTTTTAAGCTTATTAAGTCAACTCAATTATAACTACTCATTAAGGACACAGTTATTTTTATAATCACATTATTATTCAGCCAAAACTCACATAAAGGATATTTGGATATTTTTGCTTTACCAAATGAATAAAATGATGACAGAAGCATTGTATATTTTGTCTTTTGTTCTTTACAAATCAAGAGAAATCTCTTTGGTTCATGAGCATCTAAAATTTCTTTCTTATGTTCCTTAATTAGGATAATTAGTTAAATCTTTGTTAGAATCAATTGTTCACTTATTGTACTGCAGGAGGCACATTTGCATTATACTCACTTCTCTGCAGACATGCTAGACTAAGCATTTTGCCTAATCAGCAACCAACAGATGAGAATTTATCTGCTTATTCAACAGAAGATTCTGCTGATACATGGCAATCTTCTCTTTTGAAGCTGTTCTTTGAAAAGCACCCTAGGTTCCAGAAAGGACTGTTAATCTTTGTTCTGTTGGGAACTTGCATGACAATTGGTGATGGTGTGATTACTCCTGCAATATCAGGTATTTTGATCAGAAGCATCCCCTCTCAGATCATATTATGATGTTTACTTCATGATGTGGCAAATACAAGTAAATGACATCCGTTCCATGGAGGATAAATATGCCACATGTCAACACCATATTGGGTGATAGTGACACATCAACACTAATGAACACGTCAGTAAAAATGAGGAGATAGACGTGGCATATCAGCTCCATGTGGCCGTGCTGATGTTCATGTTAGTCGTAGCTCACTATCATCAAATGTGGTTTTGACATGCGGCATTGTCATCCTACATGGACATGATGGTGTGTACCTCTGTTTCCAACATCAGCTTTTTTAAACCGAAAGTTGATGTCAGGGACCAAAAATGAAAACATTTGATTTTGCAGGGACTAAACATAATATTTAAACCAAAAAGAATTATGTTATCAATCATTAGCAATGTCACAGATACACATATGCATTCCTTAAATTGTAACTTTAGCTAATTAGTAATTGCTAGAATTCATTATTTCTCATTAATGTGATTAGACAAAAGCACATTTCAGAATAAATAATTGCACTGTTTACCGAAAATATATTGTTTCAAGAGTTGATCCTTATACAAAGTTCTGTACCTGTTTGTCCGTTTCGGTCTATGACCATCCTTTTTGTGTCTCATTTCAGTATTTTCAGCAGTTTCAGGAGTTCAAGTTAAGATCAACCAACTCCATGACAGTAAGCTAACCAAACTTCTATCATTACCATTATGTCTATTCAAAGCATAATTTTAAAACACTACATTATGTATTGCGCAGATTATGTTGTTATAGTCTCATGTATCATTTTAGTTGGCCTTTTCTCCATTCAACATCATGGAACACATAGAGTTGCCTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAATATATTCCGATGGAACCGACAAGTATATCGTGCACTTTCACCAGTCTATATGTTTAGGTTTCTCAAAACCACTGGCATTGAAGGATGGTTGTCATTAAGTGGAGTTGTGCTTTCAATAACAGGTACCTATTAGTTAGTCAAAATGTCACGAAGATTGTCCAAATTTGGTTGTACAACAAATCATTTCTCTTTCAGCTAAAGAGCTACGCGATTAATTTCCTATGTGATACCATCTTAGGTGTGGAGACAATGTATGCTGACATGGGTCATTTTTCAGCACTCTCAATAAAGGTAAATTAAAAGTATACAATAATTAACAATATTGATCACAAGTATATTAGTCTAGCATACAAAAATGAAATCTGATTTAACAGTTGCACTTAAATATCAGATAGCCTTCACATGTTTAGTATATCCGTGCCTGATTTTGGCATACATGGGTGAGGCTGCATTTCTCTCTAAGCATCATTATGACATTGAGAGAAGTTTCTACAAAGCCATACCAGGCAAGAATTCACTTTAAGAAACCACAAAGATATCGATATTATTTATGATAACTCTAGGGTAACTGTGCCACTATTTTTCTGCAGAAGCTGTATTTTGGCCAGTTTTTATAGTGGCCAATTTTGCTGCTGTTGTAGGAAGTCAAGCAGTGATTTCTGCAACTTTTTCCATCATAAGCCAATGCTGTGCATTAAATTGTTTTCCTCGAGTCAAGATTGTTCATACTTCTAGCAAAATATATGGACAGATTTATGTTCCAGAAATCAATTGGATATTAATGTGCCTTTGTTTAGCTGTCACAATTGGCCTTAGGGATACAAACATGATGGGTCATGCATATGGTATGATATCTTTTTCCACTGTGTTTAGATTAAACAATCATTTTTATCCTAAAATGTGTTAAGCGCTGTCACAATAGTCTCTAGCGTATCAAATTATAAAAATAAAATGAAAAACTACATAAATGCGTCTTTCATTAGTCTGTTTCTTCATCAAATGTATCTTTCATTAATTAGTTTAATTATTGAATGTGTCTTCAAGTAGTCAACTTGGTCCATAAAATTACAAACAAAAGACACTTTAGGGACATTATCATAACTCGGATACAATCATTATTATAGTGATTACGCCTCACACATTTAGGGAAAATGACTGTTTATTCTTATATTTACTCATTATGATACTTGAAGTATGGAAAACTAAATTTAAACTACATTTCTTGGTTTGCAGGGTTGGCTATCACCACTGTTATGTTTGTGACAACATGTTTGATGACACTAGTAATTATAATTGTTTGGAAACAAGGGATAATAAAAGCACTTACATGTTTCCTGTTGTTTGGATCTATTGAACTTCTTTACATCTCAGCTTCTGTCTGCAAAGTCCCTGAAGGAGGATGGATCCCAATTTCGCTCTCTTTCATTTTTATGGCCGTAATGTTCACATGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAAAACAAGGTCTCGGTGAGCAAGATGTTATCCTTAGGACCATGCTTAGGCATGGTCCGTGTCCCAGGAATCGGTCTCATTTTCAGTAATCTTGCTTCCGGTATCCCGGCTATTTTCGGTCATTTTATTACAAATTTACCAGCATTCCATCAGGTGTTAGTTTTTGTATGTACTAAATCAGTTCAAGTCCCTTATGTCAATGAAAGTGAAAGATTAGTCATCAGCAGGATTGGTCCGAAGGAGTTCTACATGTTTTGGTGCATTGTCCGATACGGTTACAAAGACATGCAACAAGAGAATTACAATTTTGATAATAAATTGATATCTGCAATAATTCAGTTTATAGAAATAGAAGACAATGTTCCAGAACAAACAAATGAATTGACTATAGATGATGGAAGAAACATAAATGTGGAAAATCTCGGTGCTTCACAACACACCTTGAAATTGAATTGGTCACATTCTGAAAAGAATTGTTTACCATTTTCATGTGATGGCCAACAACTTCAAGACGAGTCCTATAAAGTCGAGTCATTGCAGATTTTAAAAGCCAAAGAATCAGGTGTTACTTATATAGTTGGGCATTCCTATGCAGAGGCAAAAAAATCATCTTCCATTTTAAAGAAATTTGGAATAGATGTTGTTTATGCTTTTCTAAGCAAAAATTGCAGAGAACCTGATATTATGCTGGAAGTAGCTCATACTTCTTTGCTAGAAGTTGGTATGGTTTACCATGTATAA
Protein sequence

>MS.gene038119.t1

MNPSEQFVEHGISHQNLKRTSCANVLTLAYQSLGVVYGDLSTSPLYVYKTSFSGELSLKEDDEEIFGVLSFIFWTFTIIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDENLSAYSTEDSADTWQSSLLKLFFEKHPRFQKGLLIFVLLGTCMTIGDGVITPAISVFSAVSGVQVKINQLHDNYVVIVSCIILVGLFSIQHHGTHRVAFMFAPVVAAWLLCISGIGIYNIFRWNRQVYRALSPVYMFRFLKTTGIEGWLSLSGVVLSITGVETMYADMGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIERSFYKAIPEAVFWPVFIVANFAAVVGSQAVISATFSIISQCCALNCFPRVKIVHTSSKIYGQIYVPEINWILMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTSSVCKVPEGGWIPISLSFIFMAVMFTWNYGTMKKHQFDVENKVSVSKMLSLGPCLGMVRVPGIGLIFSNLASGIPAIFGHFITNLPAFHQVLVFVCTKSVQVPYVNESERLVISRIGPKEFYMFWCIVRYGYKDMQQENYNFDNKLISAIIQFIEIEDNVPEQTNELTIDDGRNINVENLGASQHTLKLNWSHSEKNCLPFSCDGQQLQDESYKVESLQILKAKESGVTYIVGHSYAEAKKSSSILKKFGIDVVYAFLSKNCREPDIMLEVAHTSLLEVGMVYHV