Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013424.t1 | XP_013461519.1 | 99.4 | 794 | 5 | 0 | 1 | 794 | 1 | 794 | 0.00E+00 | 1561.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013424.t1 | O22881 | 77.9 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0e+00 | 1226.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013424.t1 | A0A072V0K3 | 99.4 | 794 | 5 | 0 | 1 | 794 | 1 | 794 | 0.0e+00 | 1561.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013424 | MS.gene47702 | PPI |
| MS.gene013424 | MS.gene54170 | PPI |
| MS.gene016996 | MS.gene013424 | PPI |
| MS.gene013424 | MS.gene038119 | PPI |
| MS.gene013424 | MS.gene57004 | PPI |
| MS.gene50194 | MS.gene013424 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013424.t1 | MTR_3g094090 | 99.370 | 794 | 5 | 0 | 1 | 794 | 1 | 794 | 0.0 | 1626 |
| MS.gene013424.t1 | MTR_3g094090 | 99.672 | 609 | 2 | 0 | 186 | 794 | 1 | 609 | 0.0 | 1256 |
| MS.gene013424.t1 | MTR_6g007697 | 63.832 | 788 | 250 | 8 | 14 | 792 | 13 | 774 | 0.0 | 1035 |
| MS.gene013424.t1 | MTR_5g034500 | 59.530 | 808 | 287 | 10 | 1 | 794 | 1 | 782 | 0.0 | 957 |
| MS.gene013424.t1 | MTR_6g033165 | 53.970 | 806 | 323 | 10 | 6 | 794 | 45 | 819 | 0.0 | 847 |
| MS.gene013424.t1 | MTR_5g071860 | 52.625 | 781 | 322 | 10 | 14 | 792 | 18 | 752 | 0.0 | 826 |
| MS.gene013424.t1 | MTR_5g071630 | 49.435 | 797 | 322 | 15 | 3 | 792 | 1 | 723 | 0.0 | 754 |
| MS.gene013424.t1 | MTR_8g099090 | 47.081 | 788 | 392 | 9 | 14 | 792 | 19 | 790 | 0.0 | 737 |
| MS.gene013424.t1 | MTR_5g071827 | 51.549 | 710 | 296 | 10 | 85 | 792 | 1 | 664 | 0.0 | 736 |
| MS.gene013424.t1 | MTR_2g438150 | 46.366 | 798 | 388 | 8 | 1 | 794 | 28 | 789 | 0.0 | 698 |
| MS.gene013424.t1 | MTR_2g438150 | 46.241 | 798 | 389 | 8 | 1 | 794 | 28 | 789 | 0.0 | 696 |
| MS.gene013424.t1 | MTR_8g107510 | 44.061 | 783 | 419 | 8 | 13 | 791 | 12 | 779 | 0.0 | 676 |
| MS.gene013424.t1 | MTR_4g099260 | 44.125 | 800 | 411 | 10 | 1 | 792 | 42 | 813 | 0.0 | 675 |
| MS.gene013424.t1 | MTR_4g094660 | 46.433 | 799 | 384 | 11 | 1 | 794 | 28 | 787 | 0.0 | 671 |
| MS.gene013424.t1 | MTR_8g063840 | 44.942 | 781 | 397 | 10 | 18 | 794 | 89 | 840 | 0.0 | 652 |
| MS.gene013424.t1 | MTR_8g022130 | 42.455 | 782 | 383 | 10 | 11 | 792 | 50 | 764 | 0.0 | 626 |
| MS.gene013424.t1 | MTR_7g108480 | 41.507 | 783 | 386 | 8 | 13 | 792 | 58 | 771 | 0.0 | 624 |
| MS.gene013424.t1 | MTR_2g438160 | 52.000 | 600 | 276 | 6 | 1 | 596 | 28 | 619 | 0.0 | 598 |
| MS.gene013424.t1 | MTR_8g088200 | 41.927 | 799 | 426 | 9 | 1 | 792 | 13 | 780 | 0.0 | 598 |
| MS.gene013424.t1 | MTR_2g008820 | 41.869 | 781 | 414 | 12 | 22 | 794 | 101 | 849 | 0.0 | 597 |
| MS.gene013424.t1 | MTR_8g063900 | 46.142 | 635 | 327 | 6 | 12 | 639 | 53 | 679 | 0.0 | 585 |
| MS.gene013424.t1 | MTR_5g070670 | 40.741 | 783 | 420 | 13 | 22 | 794 | 101 | 849 | 0.0 | 561 |
| MS.gene013424.t1 | MTR_4g094660 | 45.369 | 637 | 309 | 8 | 161 | 794 | 1 | 601 | 8.28e-176 | 518 |
| MS.gene013424.t1 | MTR_5g034590 | 63.584 | 173 | 63 | 0 | 423 | 595 | 88 | 260 | 2.52e-74 | 246 |
| MS.gene013424.t1 | MTR_5g034590 | 34.574 | 188 | 92 | 6 | 84 | 240 | 5 | 192 | 2.97e-17 | 84.7 |
| MS.gene013424.t1 | MTR_8g022160 | 52.047 | 171 | 77 | 2 | 11 | 181 | 50 | 215 | 3.47e-51 | 180 |
| MS.gene013424.t1 | MTR_1g029310 | 35.938 | 128 | 73 | 3 | 171 | 298 | 12 | 130 | 5.10e-17 | 78.6 |
| MS.gene013424.t1 | MTR_6g045057 | 37.342 | 158 | 91 | 5 | 176 | 331 | 8 | 159 | 2.12e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013424.t1 | AT2G40540 | 77.888 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0 | 1272 |
| MS.gene013424.t1 | AT2G40540 | 77.888 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0 | 1272 |
| MS.gene013424.t1 | AT2G40540 | 77.888 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0 | 1272 |
| MS.gene013424.t1 | AT2G40540 | 77.888 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0 | 1272 |
| MS.gene013424.t1 | AT2G40540 | 77.888 | 805 | 156 | 9 | 1 | 794 | 1 | 794 | 0.0 | 1272 |
| MS.gene013424.t1 | AT5G14880 | 63.418 | 790 | 259 | 12 | 14 | 794 | 13 | 781 | 0.0 | 991 |
| MS.gene013424.t1 | AT1G70300 | 61.194 | 804 | 280 | 9 | 1 | 794 | 1 | 782 | 0.0 | 985 |
| MS.gene013424.t1 | AT3G02050 | 53.325 | 797 | 354 | 8 | 4 | 794 | 5 | 789 | 0.0 | 795 |
| MS.gene013424.t1 | AT2G30070 | 58.949 | 609 | 246 | 4 | 14 | 621 | 18 | 623 | 0.0 | 759 |
| MS.gene013424.t1 | AT2G30070 | 59.459 | 74 | 30 | 0 | 721 | 794 | 639 | 712 | 1.09e-18 | 91.7 |
| MS.gene013424.t1 | AT4G23640 | 49.554 | 785 | 379 | 7 | 12 | 792 | 2 | 773 | 0.0 | 755 |
| MS.gene013424.t1 | AT1G60160 | 45.283 | 795 | 373 | 14 | 14 | 794 | 81 | 827 | 0.0 | 666 |
| MS.gene013424.t1 | AT4G19960 | 47.409 | 772 | 377 | 8 | 26 | 794 | 62 | 807 | 0.0 | 662 |
| MS.gene013424.t1 | AT2G35060 | 46.617 | 798 | 381 | 12 | 1 | 794 | 36 | 792 | 0.0 | 662 |
| MS.gene013424.t1 | AT2G35060 | 46.617 | 798 | 381 | 12 | 1 | 794 | 36 | 792 | 0.0 | 662 |
| MS.gene013424.t1 | AT2G35060 | 46.617 | 798 | 381 | 12 | 1 | 794 | 36 | 792 | 0.0 | 662 |
| MS.gene013424.t1 | AT1G31120 | 46.366 | 798 | 388 | 10 | 1 | 794 | 35 | 796 | 0.0 | 658 |
| MS.gene013424.t1 | AT4G13420 | 42.033 | 797 | 404 | 9 | 3 | 792 | 38 | 783 | 0.0 | 657 |
| MS.gene013424.t1 | AT2G35060 | 46.558 | 799 | 381 | 13 | 1 | 794 | 36 | 793 | 0.0 | 657 |
| MS.gene013424.t1 | AT4G19960 | 46.447 | 788 | 377 | 9 | 26 | 794 | 62 | 823 | 0.0 | 652 |
| MS.gene013424.t1 | AT4G19960 | 45.865 | 798 | 377 | 9 | 26 | 794 | 62 | 833 | 0.0 | 649 |
| MS.gene013424.t1 | AT2G30070 | 57.624 | 505 | 210 | 4 | 118 | 621 | 2 | 503 | 0.0 | 616 |
| MS.gene013424.t1 | AT2G30070 | 59.459 | 74 | 30 | 0 | 721 | 794 | 519 | 592 | 7.65e-19 | 91.7 |
| MS.gene013424.t1 | AT4G33530 | 41.260 | 778 | 424 | 12 | 22 | 794 | 106 | 855 | 0.0 | 583 |
| MS.gene013424.t1 | AT5G09400 | 40.949 | 801 | 425 | 13 | 2 | 794 | 98 | 858 | 0.0 | 582 |
| MS.gene013424.t1 | AT4G19960 | 46.013 | 602 | 302 | 5 | 195 | 794 | 6 | 586 | 1.77e-174 | 514 |
| MS.gene013424.t1 | AT4G33530 | 38.438 | 640 | 365 | 8 | 158 | 794 | 14 | 627 | 1.63e-158 | 475 |
Find 183 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTGCATTCACCTTTC+TGG | 0.122911 | 3.4:-85730259 | MS.gene013424:intron |
| TGCACTTATATTGGCATATA+TGG | 0.141485 | 3.4:-85730229 | MS.gene013424:CDS |
| CTTGGTACTTGTATGGTAAT+TGG | 0.184251 | 3.4:-85731626 | MS.gene013424:CDS |
| GAGACTAATGAAGAGATTTA+TGG | 0.198641 | 3.4:-85732028 | MS.gene013424:CDS |
| TTTACATCCCAGAAATTAAT+TGG | 0.199713 | 3.4:-85729816 | MS.gene013424:CDS |
| TCTTGGTCATTTCAATTATA+TGG | 0.206069 | 3.4:-85730391 | MS.gene013424:CDS |
| GCTGGTATTGCTTTCATTCT+TGG | 0.223882 | 3.4:-85728700 | MS.gene013424:CDS |
| TTGGTACTTGTATGGTAATT+GGG | 0.231362 | 3.4:-85731625 | MS.gene013424:CDS |
| CTTACACTGGTGGTGTTTCT+TGG | 0.237289 | 3.4:+85731280 | None:intergenic |
| CTAGAATGGCTTCTAGCTTT+AGG | 0.240333 | 3.4:-85729369 | MS.gene013424:CDS |
| TTTCAATTATATGGCCATTC+AGG | 0.245101 | 3.4:-85730382 | MS.gene013424:intron |
| CTCTTTATTCATTGATTTGT+AGG | 0.245636 | 3.4:-85731805 | MS.gene013424:CDS |
| GCAAACCTCACTCGTCTTTC+GGG | 0.247609 | 3.4:+85728811 | None:intergenic |
| CAGAGTCTTGGTGTTGTATA+TGG | 0.249792 | 3.4:-85732115 | MS.gene013424:CDS |
| CTTCTGATTGTGGTTCTTCT+TGG | 0.250106 | 3.4:-85731644 | MS.gene013424:CDS |
| GGTATATCCTGCACTTATAT+TGG | 0.277914 | 3.4:-85730238 | MS.gene013424:CDS |
| GTGCTTACCCCAGCCATTTC+GGG | 0.281397 | 3.4:-85731596 | MS.gene013424:intron |
| CTGCTACTCATCGATCTTAT+AGG | 0.300540 | 3.4:-85729149 | MS.gene013424:CDS |
| AGCTACTATGTCTCCGTTCC+AGG | 0.305722 | 3.4:-85730159 | MS.gene013424:intron |
| CCAACCTCCAATAAAGAAAC+TGG | 0.307237 | 3.4:+85728559 | None:intergenic |
| AACAACGTGCCTAACTTCTT+TGG | 0.307827 | 3.4:-85729610 | MS.gene013424:CDS |
| ATGAGCATCCAATTAATTTC+TGG | 0.307961 | 3.4:+85729808 | None:intergenic |
| AGCAAACCTCACTCGTCTTT+CGG | 0.311992 | 3.4:+85728810 | None:intergenic |
| TTCTTAGAGCTGATGATAAT+GGG | 0.314821 | 3.4:-85731943 | MS.gene013424:CDS |
| CCTACAAGGTACCTCTCTTC+AGG | 0.321296 | 3.4:+85729183 | None:intergenic |
| GGAATATTACTTTGTATAAC+AGG | 0.322568 | 3.4:-85730872 | MS.gene013424:intron |
| AGTGCTTACCCCAGCCATTT+CGG | 0.325203 | 3.4:-85731597 | MS.gene013424:CDS |
| GAAGCTATGTTTGCTGATCT+TGG | 0.331982 | 3.4:-85730408 | MS.gene013424:CDS |
| GCTGACTCTCGTATCCTTGT+TGG | 0.338648 | 3.4:+85728923 | None:intergenic |
| TAATGATTATAATGCTCATT+TGG | 0.343435 | 3.4:-85729443 | MS.gene013424:CDS |
| GCTATTCTAGCTTCTGTTGT+GGG | 0.351333 | 3.4:-85729949 | MS.gene013424:CDS |
| AATTTAGAATATTCTTTCTC+TGG | 0.360057 | 3.4:+85731707 | None:intergenic |
| TCCCATCACTTGCTTCATAC+TGG | 0.360782 | 3.4:-85731101 | MS.gene013424:CDS |
| AGGAAACAAAGGGCTAAAAT+TGG | 0.361450 | 3.4:+85729561 | None:intergenic |
| AGTAGCCATGTCAGCACAAT+TGG | 0.368461 | 3.4:+85731022 | None:intergenic |
| GTTCTTAGAGCTGATGATAA+TGG | 0.369896 | 3.4:-85731944 | MS.gene013424:CDS |
| GATAAGTGGATGGCTGTCTT+TGG | 0.370262 | 3.4:-85730897 | MS.gene013424:CDS |
| AAGAAGCTGGCACTTAACTA+TGG | 0.372161 | 3.4:-85728637 | MS.gene013424:CDS |
| GGTTCTTCTTGGTACTTGTA+TGG | 0.373021 | 3.4:-85731633 | MS.gene013424:CDS |
| AGTTACAGATTAACTGTGAT+TGG | 0.377036 | 3.4:-85728964 | MS.gene013424:CDS |
| CTTTGGTGATAGTAGTTTGT+TGG | 0.378759 | 3.4:-85729593 | MS.gene013424:CDS |
| TGGCTGTTTCCCAAGAGTTA+AGG | 0.392383 | 3.4:-85729872 | MS.gene013424:CDS |
| TCATCAGCATGCTGTCTGTT+TGG | 0.393866 | 3.4:+85731761 | None:intergenic |
| TATAGGTGTATAGTAAGATA+TGG | 0.400337 | 3.4:-85729132 | MS.gene013424:CDS |
| TGAGCATCCAATTAATTTCT+GGG | 0.403364 | 3.4:+85729809 | None:intergenic |
| TCTGTTAAGCTTTGCACACT+TGG | 0.403454 | 3.4:+85728865 | None:intergenic |
| GAGTTCGATACCAATCATAT+TGG | 0.413900 | 3.4:+85729040 | None:intergenic |
| TTGTTTGCACTTCAACACTA+TGG | 0.414430 | 3.4:-85731073 | MS.gene013424:CDS |
| ATTGCCAGGGTCCCTGGAAT+AGG | 0.415229 | 3.4:-85729333 | MS.gene013424:CDS |
| ACAACAAGGTTTCACTAGAA+TGG | 0.419139 | 3.4:-85729383 | MS.gene013424:CDS |
| TTGGAAGACTATTCTGCTAC+TGG | 0.426942 | 3.4:-85732143 | MS.gene013424:CDS |
| TTCTTTATTGGAGGTTGGCA+TGG | 0.427269 | 3.4:-85728554 | MS.gene013424:CDS |
| CCAGTTTCTTTATTGGAGGT+TGG | 0.427965 | 3.4:-85728559 | MS.gene013424:CDS |
| GTATGAACAACCTTAACTCT+TGG | 0.428073 | 3.4:+85729862 | None:intergenic |
| AGCACTTTCTTCATATAAGA+TGG | 0.430100 | 3.4:-85731738 | MS.gene013424:CDS |
| CTATGTATTGCTGTCACCAT+TGG | 0.435178 | 3.4:-85729781 | MS.gene013424:CDS |
| ATAAGTGGATGGCTGTCTTT+GGG | 0.443805 | 3.4:-85730896 | MS.gene013424:CDS |
| CCTGAAGAGAGGTACCTTGT+AGG | 0.443876 | 3.4:-85729183 | MS.gene013424:CDS |
| GGATTCTTACCCGAAATGGC+TGG | 0.451539 | 3.4:+85731587 | None:intergenic |
| AAATGAGCATTATAATCATT+AGG | 0.453239 | 3.4:+85729445 | None:intergenic |
| TTAGGAATTGCCAGGGTCCC+TGG | 0.454586 | 3.4:-85729339 | MS.gene013424:CDS |
| GTGAACACAAGGCCTATTCC+AGG | 0.455129 | 3.4:+85729321 | None:intergenic |
| CAAAGTTCCGCGAGGGTGCT+TGG | 0.456491 | 3.4:-85729491 | MS.gene013424:CDS |
| AGGGCCTGACGTGTCACTTA+AGG | 0.456997 | 3.4:-85728587 | MS.gene013424:CDS |
| AAACAAATGGATCTTGAACC+TGG | 0.462548 | 3.4:-85732305 | None:intergenic |
| TATGAACAACCTTAACTCTT+GGG | 0.463219 | 3.4:+85729863 | None:intergenic |
| TCAGGGGTTACATGAGGAAC+AGG | 0.463891 | 3.4:+85729201 | None:intergenic |
| GTCCAAGCTTAGGAATTGCC+AGG | 0.464211 | 3.4:-85729347 | MS.gene013424:CDS |
| AGGAAGAGGGCAAGGAGGAT+TGG | 0.469920 | 3.4:+85729465 | None:intergenic |
| CTAGCTTTAGGTCCAAGCTT+AGG | 0.471303 | 3.4:-85729357 | MS.gene013424:CDS |
| CTACAAGGTACCTCTCTTCA+GGG | 0.471608 | 3.4:+85729184 | None:intergenic |
| ACTAGGACACGGTGATATGC+AGG | 0.474345 | 3.4:+85729246 | None:intergenic |
| GCACTTATATTGGCATATAT+GGG | 0.478501 | 3.4:-85730228 | MS.gene013424:CDS |
| AAGAACTTGAACATATAATA+CGG | 0.479223 | 3.4:+85730932 | None:intergenic |
| TTGCTCCAATTGTGCTGACA+TGG | 0.480391 | 3.4:-85731027 | MS.gene013424:CDS |
| GCATACTGCTCTTCTGATTG+TGG | 0.480604 | 3.4:-85731654 | MS.gene013424:CDS |
| ACAAAGCGGGAGAAATTCGC+TGG | 0.480919 | 3.4:+85729279 | None:intergenic |
| TTCATCATTCTTGAAGAAGC+TGG | 0.483278 | 3.4:-85728650 | MS.gene013424:CDS |
| TTGGGAAACAGCCAAGAGAT+TGG | 0.488433 | 3.4:+85729881 | None:intergenic |
| GATAGGATTCTTACCCGAAA+TGG | 0.489122 | 3.4:+85731583 | None:intergenic |
| CTCAGCAGTATCTGGTCTTG+AGG | 0.489203 | 3.4:-85731315 | MS.gene013424:CDS |
| ACCCTGGCAATTCCTAAGCT+TGG | 0.490023 | 3.4:+85729345 | None:intergenic |
| AACAGCCAAGAGATTGGCTC+TGG | 0.490204 | 3.4:+85729887 | None:intergenic |
| CTTTATGCTGCTCAAGAAGC+TGG | 0.492942 | 3.4:-85728718 | MS.gene013424:CDS |
| TTGAACCTGGGAGGAAGTGT+TGG | 0.499293 | 3.4:-85732292 | MS.gene013424:CDS |
| GCGTATATAATATATTCAAA+TGG | 0.503557 | 3.4:-85730982 | MS.gene013424:CDS |
| CAGGTCCTACGCGGCCTACA+AGG | 0.504050 | 3.4:+85729169 | None:intergenic |
| CTACTGGCTTACCAGAGTCT+TGG | 0.504452 | 3.4:-85732127 | MS.gene013424:CDS |
| CTACTATCACCAAAGAAGTT+AGG | 0.504694 | 3.4:+85729601 | None:intergenic |
| CTACTGTGCATTAGCACACT+TGG | 0.504767 | 3.4:-85731004 | MS.gene013424:CDS |
| CTTAACAGATGTTATTGAGA+TGG | 0.506593 | 3.4:-85728851 | MS.gene013424:CDS |
| CTTTCGGGCGCAGCATCCAT+CGG | 0.509696 | 3.4:+85728826 | None:intergenic |
| CTATAAGATCGATGAGTAGC+AGG | 0.510208 | 3.4:+85729150 | None:intergenic |
| AATCCTACAGACACGCTACC+TGG | 0.511247 | 3.4:+85728889 | None:intergenic |
| AGCTATTCTAGCTTCTGTTG+TGG | 0.512141 | 3.4:-85729950 | MS.gene013424:CDS |
| CACTATGGTACACATAAGGT+TGG | 0.512279 | 3.4:-85731058 | MS.gene013424:CDS |
| TGCAGAAAGCGTGAGATGGC+CGG | 0.514525 | 3.4:-85729983 | MS.gene013424:intron |
| ATGTTCCACTGATGATTGCT+TGG | 0.514640 | 3.4:+85729923 | None:intergenic |
| TGAACCTGGGAGGAAGTGTT+GGG | 0.514870 | 3.4:-85732291 | MS.gene013424:CDS |
| AAACACCTGGGAAATGCATC+AGG | 0.515977 | 3.4:-85729745 | MS.gene013424:intron |
| AAACAAAGGGCTAAAATTGG+TGG | 0.517367 | 3.4:+85729564 | None:intergenic |
| GATTCTTACCCGAAATGGCT+GGG | 0.519645 | 3.4:+85731588 | None:intergenic |
| ATGGATATAATTTCTTGAGA+AGG | 0.521502 | 3.4:-85728618 | MS.gene013424:CDS |
| GGAGAAATTCGCTGGGATGC+CGG | 0.528570 | 3.4:+85729287 | None:intergenic |
| ATAAACCAGAGCCAATCTCT+TGG | 0.536473 | 3.4:-85729892 | MS.gene013424:CDS |
| CTATTCTAGCTTCTGTTGTG+GGG | 0.536872 | 3.4:-85729948 | MS.gene013424:CDS |
| TGGTACTTGTATGGTAATTG+GGG | 0.541658 | 3.4:-85731624 | MS.gene013424:CDS |
| TCAACACTATGGTACACATA+AGG | 0.544559 | 3.4:-85731062 | MS.gene013424:CDS |
| TTAGAATATTCTTTCTCTGG+AGG | 0.545268 | 3.4:+85731710 | None:intergenic |
| GAAGTGTTGGGATAGTTCAA+AGG | 0.545829 | 3.4:-85732279 | MS.gene013424:intron |
| CTAGTGAAACCTTGTTGTGA+AGG | 0.546959 | 3.4:+85729388 | None:intergenic |
| GTGGTGTTTCTTGGACATGA+TGG | 0.549521 | 3.4:+85731289 | None:intergenic |
| ACTTGTATGGTAATTGGGGA+TGG | 0.550558 | 3.4:-85731620 | MS.gene013424:CDS |
| CAACCTCCAATAAAGAAACT+GGG | 0.551575 | 3.4:+85728560 | None:intergenic |
| CATATACAACACCAAGACTC+TGG | 0.553981 | 3.4:+85732116 | None:intergenic |
| AGTCAGCAAAGTGTGCAGCC+AGG | 0.554399 | 3.4:-85728907 | MS.gene013424:CDS |
| CTATCCCAACACTTCCTCCC+AGG | 0.555040 | 3.4:+85732287 | None:intergenic |
| ATATATGCCAATATAAGTGC+AGG | 0.555536 | 3.4:+85730231 | None:intergenic |
| ATTTCGAGACACAAAACACC+TGG | 0.555691 | 3.4:-85729758 | MS.gene013424:CDS |
| AGGGAGGTTGGTGACAAAGC+GGG | 0.557999 | 3.4:+85729266 | None:intergenic |
| ACTATGGTACACATAAGGTT+GGG | 0.561821 | 3.4:-85731057 | MS.gene013424:CDS |
| AACAAATGGATCTTGAACCT+GGG | 0.562805 | 3.4:-85732304 | None:intergenic |
| GCATTATAATCATTAGGAAG+AGG | 0.565169 | 3.4:+85729451 | None:intergenic |
| TCTTGAGAAGGAATTGTAGA+GGG | 0.569945 | 3.4:-85728606 | MS.gene013424:CDS |
| ACCAGTATGAAGCAAGTGAT+GGG | 0.573753 | 3.4:+85731100 | None:intergenic |
| TGAGGTTGGTGTGCAAATGC+AGG | 0.574824 | 3.4:-85728755 | MS.gene013424:CDS |
| GTGTTCACTGATCTCACTAC+CGG | 0.575606 | 3.4:-85729306 | MS.gene013424:CDS |
| TATGATTGGTATCGAACTCG+TGG | 0.577585 | 3.4:-85729036 | MS.gene013424:CDS |
| CACCAGTATGAAGCAAGTGA+TGG | 0.581489 | 3.4:+85731099 | None:intergenic |
| CATTATAATCATTAGGAAGA+GGG | 0.585288 | 3.4:+85729452 | None:intergenic |
| TGGCTGCAGAAAGCGTGAGA+TGG | 0.586100 | 3.4:-85729987 | MS.gene013424:intron |
| AAGGCCTATTCCAGGGACCC+TGG | 0.586920 | 3.4:+85729329 | None:intergenic |
| AGAATAGCTAAGATAAGCAC+CGG | 0.592033 | 3.4:+85729964 | None:intergenic |
| CAGCCAGGTAGCGTGTCTGT+AGG | 0.592543 | 3.4:-85728892 | MS.gene013424:CDS |
| ACAAACACATATTTGAAGAG+TGG | 0.592621 | 3.4:+85731968 | None:intergenic |
| AGTATGAGCATTGAGGATGA+TGG | 0.593967 | 3.4:-85729009 | MS.gene013424:CDS |
| TTCTTGAGAAGGAATTGTAG+AGG | 0.594347 | 3.4:-85728607 | MS.gene013424:CDS |
| TGAATATGACCTTCACAACA+AGG | 0.594779 | 3.4:-85729397 | MS.gene013424:CDS |
| AGCAGTGATGACCGTGATGT+TGG | 0.596899 | 3.4:-85729634 | MS.gene013424:CDS |
| ATTCTTACCCGAAATGGCTG+GGG | 0.602759 | 3.4:+85731589 | None:intergenic |
| ACGGTGATATGCAGGGAGGT+TGG | 0.607011 | 3.4:+85729254 | None:intergenic |
| TCTTATATGAAAACAAAGCA+AGG | 0.609165 | 3.4:-85728673 | MS.gene013424:CDS |
| ATATACCTGATGCATTTCCC+AGG | 0.610886 | 3.4:+85729740 | None:intergenic |
| AAAAGACAAGGATAAGTGGA+TGG | 0.612497 | 3.4:-85730907 | MS.gene013424:CDS |
| AGAGCTGATGATAATGGGGA+AGG | 0.616664 | 3.4:-85731938 | MS.gene013424:intron |
| ATGGCAATGAATACCTGGAA+CGG | 0.617377 | 3.4:+85730146 | None:intergenic |
| CTCATGTAACCCCTGAAGAG+AGG | 0.618572 | 3.4:-85729194 | MS.gene013424:CDS |
| GGAACCTTAAGTGACACGTC+AGG | 0.620717 | 3.4:+85728583 | None:intergenic |
| TCCAAGCTTAGGAATTGCCA+GGG | 0.621282 | 3.4:-85729346 | MS.gene013424:CDS |
| TGGGAATAGTATGAGCATTG+AGG | 0.624273 | 3.4:-85729016 | MS.gene013424:CDS |
| AGGTACCTTGTAGGCCGCGT+AGG | 0.626410 | 3.4:-85729174 | MS.gene013424:CDS |
| TAATCATTAGGAAGAGGGCA+AGG | 0.630253 | 3.4:+85729457 | None:intergenic |
| TGTTATTGAGATGGAACCGA+TGG | 0.632286 | 3.4:-85728842 | MS.gene013424:CDS |
| TGAACACAAGGCCTATTCCA+GGG | 0.632355 | 3.4:+85729322 | None:intergenic |
| AGTGGATGGCTGTCTTTGGG+TGG | 0.633140 | 3.4:-85730893 | MS.gene013424:CDS |
| CTCTCTTCAGGGGTTACATG+AGG | 0.638283 | 3.4:+85729195 | None:intergenic |
| GAAAGAGCTTTATATACATG+CGG | 0.639602 | 3.4:+85730956 | None:intergenic |
| GGGAGCCAAGCAATCATCAG+TGG | 0.640267 | 3.4:-85729928 | MS.gene013424:CDS |
| TCTTAGAGCTGATGATAATG+GGG | 0.641130 | 3.4:-85731942 | MS.gene013424:CDS |
| AAGTGCAGGATATACCAGAA+AGG | 0.642926 | 3.4:+85730245 | None:intergenic |
| AACCTCCAATAAAGAAACTG+GGG | 0.647207 | 3.4:+85728561 | None:intergenic |
| ATGATTGGTATCGAACTCGT+GGG | 0.648080 | 3.4:-85729035 | MS.gene013424:CDS |
| CTAGGACACGGTGATATGCA+GGG | 0.648925 | 3.4:+85729247 | None:intergenic |
| TAGTGAGATCAGTGAACACA+AGG | 0.650751 | 3.4:+85729310 | None:intergenic |
| CAAAGCGGGAGAAATTCGCT+GGG | 0.651381 | 3.4:+85729280 | None:intergenic |
| TGAAAGTGAGACAAGGTCTG+AGG | 0.659981 | 3.4:-85728773 | MS.gene013424:CDS |
| GCACGTTGTTACCAACATCA+CGG | 0.662323 | 3.4:+85729623 | None:intergenic |
| CTGCGCCCGAAAGACGAGTG+AGG | 0.673470 | 3.4:-85728816 | MS.gene013424:CDS |
| AGTGAGACAAGGTCTGAGGT+TGG | 0.674888 | 3.4:-85728769 | MS.gene013424:CDS |
| CAGGGAGGTTGGTGACAAAG+CGG | 0.679360 | 3.4:+85729265 | None:intergenic |
| TCACTGACAAAGTTCCGCGA+GGG | 0.681855 | 3.4:-85729498 | MS.gene013424:CDS |
| ATGATCATGAAAGTGAGACA+AGG | 0.691543 | 3.4:-85728780 | MS.gene013424:CDS |
| TTGGTAGCCAAGCACCCTCG+CGG | 0.692674 | 3.4:+85729484 | None:intergenic |
| AAATGGATCTTGAACCTGGG+AGG | 0.693417 | 3.4:-85732301 | MS.gene013424:CDS |
| ACCTCCAATAAAGAAACTGG+GGG | 0.693955 | 3.4:+85728562 | None:intergenic |
| TACAAGGTACCTCTCTTCAG+GGG | 0.697102 | 3.4:+85729185 | None:intergenic |
| TCATTAGGAAGAGGGCAAGG+AGG | 0.700116 | 3.4:+85729460 | None:intergenic |
| TTCACTGACAAAGTTCCGCG+AGG | 0.701157 | 3.4:-85729499 | MS.gene013424:CDS |
| TTTCGAGACACAAAACACCT+GGG | 0.702119 | 3.4:-85729757 | MS.gene013424:CDS |
| GAAGTGATTACTTACACTGG+TGG | 0.711878 | 3.4:+85731270 | None:intergenic |
| CAACATCTTGATGAACGTCG+CGG | 0.736249 | 3.4:+85729106 | None:intergenic |
| GATGAGTAGCAGGTCCTACG+CGG | 0.737138 | 3.4:+85729160 | None:intergenic |
| GGACACGGTGATATGCAGGG+AGG | 0.810812 | 3.4:+85729250 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAAATTTGATACTTTA+AGG | + | chr3.4:85730268-85730287 | None:intergenic | 15.0% |
| !! | GAATATTTATAGATAGATAT+AGG | + | chr3.4:85730080-85730099 | None:intergenic | 15.0% |
| !! | GTGAATATATTTCAATTAAA+TGG | - | chr3.4:85729635-85729654 | MS.gene013424:CDS | 15.0% |
| !! | TACTAAATTTGATACTTTAA+GGG | + | chr3.4:85730267-85730286 | None:intergenic | 15.0% |
| !!! | GAAAACATTATACAAAATTT+TGG | - | chr3.4:85730832-85730851 | MS.gene013424:intron | 15.0% |
| !! | AAAAAACAATAGGAAACAAA+GGG | + | chr3.4:85731291-85731310 | None:intergenic | 20.0% |
| !! | AAATGAGCATTATAATCATT+AGG | + | chr3.4:85731397-85731416 | None:intergenic | 20.0% |
| !! | AAGAACTTGAACATATAATA+CGG | + | chr3.4:85729910-85729929 | None:intergenic | 20.0% |
| !! | ATATATACTTGAACAAATTC+TGG | - | chr3.4:85730216-85730235 | MS.gene013424:CDS | 20.0% |
| !! | GCGTATATAATATATTCAAA+TGG | - | chr3.4:85729857-85729876 | MS.gene013424:CDS | 20.0% |
| !! | TAATGATTATAATGCTCATT+TGG | - | chr3.4:85731396-85731415 | MS.gene013424:intron | 20.0% |
| !! | TGAATATTTGTGAAATGAAA+TGG | - | chr3.4:85728625-85728644 | MS.gene013424:CDS | 20.0% |
| !! | TGTAAAACATTGTGAAATAA+GGG | + | chr3.4:85729283-85729302 | None:intergenic | 20.0% |
| !! | TTCCTATAAAAAGTGATATA+TGG | + | chr3.4:85730715-85730734 | None:intergenic | 20.0% |
| !! | TTGTAAAACATTGTGAAATA+AGG | + | chr3.4:85729284-85729303 | None:intergenic | 20.0% |
| !!! | AATTTAGAATATTCTTTCTC+TGG | + | chr3.4:85729135-85729154 | None:intergenic | 20.0% |
| !!! | ACTATGATTTTATTAAGACA+TGG | - | chr3.4:85730179-85730198 | MS.gene013424:CDS | 20.0% |
| !!! | TATAGATAGATATAGGTTTT+GGG | + | chr3.4:85730073-85730092 | None:intergenic | 20.0% |
| !!! | TTATAGATAGATATAGGTTT+TGG | + | chr3.4:85730074-85730093 | None:intergenic | 20.0% |
| ! | AATAAAAACCCACATTAGAA+AGG | + | chr3.4:85728599-85728618 | None:intergenic | 25.0% |
| ! | AGGGAAATAATGATAGATAA+AGG | + | chr3.4:85730248-85730267 | None:intergenic | 25.0% |
| ! | ATGGATATAATTTCTTGAGA+AGG | - | chr3.4:85732221-85732240 | MS.gene013424:intron | 25.0% |
| ! | ATTAACTAGATAAAACACAG+TGG | - | chr3.4:85731137-85731156 | MS.gene013424:intron | 25.0% |
| ! | ATTTCACACATACAAAAACT+AGG | + | chr3.4:85731613-85731632 | None:intergenic | 25.0% |
| ! | CAAAAAACAATAGGAAACAA+AGG | + | chr3.4:85731292-85731311 | None:intergenic | 25.0% |
| ! | CATACATCAGAAAAAATACA+TGG | - | chr3.4:85730995-85731014 | MS.gene013424:CDS | 25.0% |
| ! | CATTATAATCATTAGGAAGA+GGG | + | chr3.4:85731390-85731409 | None:intergenic | 25.0% |
| ! | GGAATATTACTTTGTATAAC+AGG | - | chr3.4:85729967-85729986 | MS.gene013424:CDS | 25.0% |
| ! | GTAAAACATTGTGAAATAAG+GGG | + | chr3.4:85729282-85729301 | None:intergenic | 25.0% |
| ! | TAAAACATTGTGAAATAAGG+GGG | + | chr3.4:85729281-85729300 | None:intergenic | 25.0% |
| ! | TATAGGTGTATAGTAAGATA+TGG | - | chr3.4:85731707-85731726 | MS.gene013424:CDS | 25.0% |
| ! | TATTTGTGAAATGAAATGGA+TGG | - | chr3.4:85728629-85728648 | MS.gene013424:CDS | 25.0% |
| ! | TCTTATATGAAAACAAAGCA+AGG | - | chr3.4:85732166-85732185 | MS.gene013424:intron | 25.0% |
| ! | TCTTGGTCATTTCAATTATA+TGG | - | chr3.4:85730448-85730467 | MS.gene013424:intron | 25.0% |
| ! | TTCAACTAGTTAATGAACTT+CGG | - | chr3.4:85729321-85729340 | MS.gene013424:CDS | 25.0% |
| ! | TTTACATCCCAGAAATTAAT+TGG | - | chr3.4:85731023-85731042 | MS.gene013424:CDS | 25.0% |
| ! | TTTGGATTTAAAGAATAAGC+AGG | + | chr3.4:85730048-85730067 | None:intergenic | 25.0% |
| !! | ATAGATAGATATAGGTTTTG+GGG | + | chr3.4:85730072-85730091 | None:intergenic | 25.0% |
| !! | CTGATTTTATCCAATATGAT+TGG | - | chr3.4:85731789-85731808 | MS.gene013424:CDS | 25.0% |
| !!! | AGACAACTTTTTTACTAGTT+CGG | + | chr3.4:85731771-85731790 | None:intergenic | 25.0% |
| !!! | CTCTTTATTCATTGATTTGT+AGG | - | chr3.4:85729034-85729053 | MS.gene013424:CDS | 25.0% |
| !!! | CTTTGTTTCCTATTGTTTTT+TGG | - | chr3.4:85731290-85731309 | MS.gene013424:CDS | 25.0% |
| !!! | TGCCATATATCACTTTTTAT+AGG | - | chr3.4:85730710-85730729 | MS.gene013424:intron | 25.0% |
| AATAGATTTGAGCTTTCACA+TGG | - | chr3.4:85730329-85730348 | MS.gene013424:intron | 30.0% | |
| ACAAACACATATTTGAAGAG+TGG | + | chr3.4:85728874-85728893 | None:intergenic | 30.0% | |
| ACAAGATTTCTTCATTGTTC+TGG | - | chr3.4:85729669-85729688 | MS.gene013424:intron | 30.0% | |
| AGCACTTTCTTCATATAAGA+TGG | - | chr3.4:85729101-85729120 | MS.gene013424:CDS | 30.0% | |
| AGTTACAGATTAACTGTGAT+TGG | - | chr3.4:85731875-85731894 | MS.gene013424:intron | 30.0% | |
| ATATATGCCAATATAAGTGC+AGG | + | chr3.4:85730611-85730630 | None:intergenic | 30.0% | |
| ATATGAGTTCGAACTGTAAT+TGG | - | chr3.4:85729367-85729386 | MS.gene013424:CDS | 30.0% | |
| ATCAGAAAAAATACATGGTC+AGG | - | chr3.4:85731000-85731019 | MS.gene013424:CDS | 30.0% | |
| ATCTGCAGACAAAAATCAAT+AGG | + | chr3.4:85729710-85729729 | None:intergenic | 30.0% | |
| ATGAGCATCCAATTAATTTC+TGG | + | chr3.4:85731034-85731053 | None:intergenic | 30.0% | |
| CTATAATATGCTATTGTACC+AGG | + | chr3.4:85730813-85730832 | None:intergenic | 30.0% | |
| CTTAACAGATGTTATTGAGA+TGG | - | chr3.4:85731988-85732007 | MS.gene013424:CDS | 30.0% | |
| GAGACTAATGAAGAGATTTA+TGG | - | chr3.4:85728811-85728830 | MS.gene013424:CDS | 30.0% | |
| GCACTTATATTGGCATATAT+GGG | - | chr3.4:85730611-85730630 | MS.gene013424:intron | 30.0% | |
| GCATTATAATCATTAGGAAG+AGG | + | chr3.4:85731391-85731410 | None:intergenic | 30.0% | |
| GTGCTTGTAAAAACATACAA+TGG | + | chr3.4:85728766-85728785 | None:intergenic | 30.0% | |
| TAGTTAATGAACTTCGGTTT+AGG | - | chr3.4:85729327-85729346 | MS.gene013424:CDS | 30.0% | |
| TATGAACAACCTTAACTCTT+GGG | + | chr3.4:85730979-85730998 | None:intergenic | 30.0% | |
| TCAAGTTCTTGAAAAAGACA+AGG | - | chr3.4:85729920-85729939 | MS.gene013424:CDS | 30.0% | |
| TGAGCATCCAATTAATTTCT+GGG | + | chr3.4:85731033-85731052 | None:intergenic | 30.0% | |
| TGCACTTATATTGGCATATA+TGG | - | chr3.4:85730610-85730629 | MS.gene013424:intron | 30.0% | |
| TTAGAATATTCTTTCTCTGG+AGG | + | chr3.4:85729132-85729151 | None:intergenic | 30.0% | |
| TTCTTAGAGCTGATGATAAT+GGG | - | chr3.4:85728896-85728915 | MS.gene013424:CDS | 30.0% | |
| TTGAAAAAGACAAGGATAAG+TGG | - | chr3.4:85729928-85729947 | MS.gene013424:CDS | 30.0% | |
| TTGGTACTTGTATGGTAATT+GGG | - | chr3.4:85729214-85729233 | MS.gene013424:CDS | 30.0% | |
| TTTATTAACCCTTCGATTTC+CGG | + | chr3.4:85729443-85729462 | None:intergenic | 30.0% | |
| TTTCAATTATATGGCCATTC+AGG | - | chr3.4:85730457-85730476 | MS.gene013424:intron | 30.0% | |
| ! | GAAAGAGCTTTATATACATG+CGG | + | chr3.4:85729886-85729905 | None:intergenic | 30.0% |
| ! | TGATGATTTTCATGTATGTG+TGG | - | chr3.4:85728991-85729010 | MS.gene013424:CDS | 30.0% |
| ! | TTGATTTTCAGAGAGATTCT+TGG | - | chr3.4:85728677-85728696 | MS.gene013424:CDS | 30.0% |
| ! | TTTTACTAGTTCGGTTTCAA+AGG | + | chr3.4:85731762-85731781 | None:intergenic | 30.0% |
| !! | AGCTCAAATCTATTGATTTG+AGG | + | chr3.4:85730323-85730342 | None:intergenic | 30.0% |
| !! | GCTCAAATCTATTGATTTGA+GGG | + | chr3.4:85730322-85730341 | None:intergenic | 30.0% |
| !!! | AATCAACAATGTTTTGATGC+AGG | - | chr3.4:85731179-85731198 | MS.gene013424:intron | 30.0% |
| !!! | AGTATTTTAACCAACCTGAA+TGG | + | chr3.4:85730474-85730493 | None:intergenic | 30.0% |
| !!! | ATCAACAATGTTTTGATGCA+GGG | - | chr3.4:85731180-85731199 | MS.gene013424:intron | 30.0% |
| AAAAGACAAGGATAAGTGGA+TGG | - | chr3.4:85729932-85729951 | MS.gene013424:CDS | 35.0% | |
| AAACAAAGGGCTAAAATTGG+TGG | + | chr3.4:85731278-85731297 | None:intergenic | 35.0% | |
| AACCTCCAATAAAGAAACTG+GGG | + | chr3.4:85732281-85732300 | None:intergenic | 35.0% | |
| AAGACATGGAATAAGTTCTC+TGG | - | chr3.4:85730193-85730212 | MS.gene013424:CDS | 35.0% | |
| AATTATATGGCCATTCAGGT+TGG | - | chr3.4:85730461-85730480 | MS.gene013424:intron | 35.0% | |
| ACAACAAGGTTTCACTAGAA+TGG | - | chr3.4:85731456-85731475 | MS.gene013424:intron | 35.0% | |
| ACTATGGTACACATAAGGTT+GGG | - | chr3.4:85729782-85729801 | MS.gene013424:CDS | 35.0% | |
| AGAATAGCTAAGATAAGCAC+CGG | + | chr3.4:85730878-85730897 | None:intergenic | 35.0% | |
| AGGAAACAAAGGGCTAAAAT+TGG | + | chr3.4:85731281-85731300 | None:intergenic | 35.0% | |
| ATGATCATGAAAGTGAGACA+AGG | - | chr3.4:85732059-85732078 | MS.gene013424:CDS | 35.0% | |
| ATTTGACACTGCTAACATGT+TGG | + | chr3.4:85729612-85729631 | None:intergenic | 35.0% | |
| CAACCTCCAATAAAGAAACT+GGG | + | chr3.4:85732282-85732301 | None:intergenic | 35.0% | |
| CACATACAAAAACTAGGACA+CGG | + | chr3.4:85731607-85731626 | None:intergenic | 35.0% | |
| CGACAGATCCAAAAAACAAT+AGG | + | chr3.4:85731301-85731320 | None:intergenic | 35.0% | |
| CTACTATCACCAAAGAAGTT+AGG | + | chr3.4:85731241-85731260 | None:intergenic | 35.0% | |
| CTAGAAGTGATTACTTACAC+TGG | + | chr3.4:85729575-85729594 | None:intergenic | 35.0% | |
| CTTGGTACTTGTATGGTAAT+TGG | - | chr3.4:85729213-85729232 | MS.gene013424:CDS | 35.0% | |
| GAGTTCGATACCAATCATAT+TGG | + | chr3.4:85731802-85731821 | None:intergenic | 35.0% | |
| GATATATGGCAATGAATACC+TGG | + | chr3.4:85730701-85730720 | None:intergenic | 35.0% | |
| GCATTTCACCTTTCTAATGT+GGG | - | chr3.4:85728588-85728607 | MS.gene013424:CDS | 35.0% | |
| GGTATATCCTGCACTTATAT+TGG | - | chr3.4:85730601-85730620 | MS.gene013424:intron | 35.0% | |
| GTACTGTTGTAAGAGTAAGA+CGG | - | chr3.4:85730107-85730126 | MS.gene013424:intron | 35.0% | |
| GTATGAACAACCTTAACTCT+TGG | + | chr3.4:85730980-85730999 | None:intergenic | 35.0% | |
| GTTCTTAGAGCTGATGATAA+TGG | - | chr3.4:85728895-85728914 | MS.gene013424:CDS | 35.0% | |
| TCAACACTATGGTACACATA+AGG | - | chr3.4:85729777-85729796 | MS.gene013424:CDS | 35.0% | |
| TCATCATGAGCAAAAGAAAC+AGG | + | chr3.4:85728977-85728996 | None:intergenic | 35.0% | |
| TCTTGAGAAGGAATTGTAGA+GGG | - | chr3.4:85732233-85732252 | MS.gene013424:intron | 35.0% | |
| TGAATATGACCTTCACAACA+AGG | - | chr3.4:85731442-85731461 | MS.gene013424:intron | 35.0% | |
| TGCATTTCACCTTTCTAATG+TGG | - | chr3.4:85728587-85728606 | MS.gene013424:CDS | 35.0% | |
| TGGTACTTGTATGGTAATTG+GGG | - | chr3.4:85729215-85729234 | MS.gene013424:CDS | 35.0% | |
| TGTTATGCTCTTATAGACCT+GGG | - | chr3.4:85730530-85730549 | MS.gene013424:intron | 35.0% | |
| TGTTCAGACTTTACTTACTC+CGG | - | chr3.4:85729395-85729414 | MS.gene013424:CDS | 35.0% | |
| TTATTAACCCTTCGATTTCC+GGG | + | chr3.4:85729442-85729461 | None:intergenic | 35.0% | |
| TTCATCATTCTTGAAGAAGC+TGG | - | chr3.4:85732189-85732208 | MS.gene013424:intron | 35.0% | |
| TTCTTGAGAAGGAATTGTAG+AGG | - | chr3.4:85732232-85732251 | MS.gene013424:intron | 35.0% | |
| TTGTTATGCTCTTATAGACC+TGG | - | chr3.4:85730529-85730548 | MS.gene013424:intron | 35.0% | |
| TTGTTTGCACTTCAACACTA+TGG | - | chr3.4:85729766-85729785 | MS.gene013424:CDS | 35.0% | |
| TTTACTTACTCCGGATTACT+GGG | - | chr3.4:85729404-85729423 | MS.gene013424:CDS | 35.0% | |
| TTTATTTGCAATGCCTTTCC+TGG | - | chr3.4:85730760-85730779 | MS.gene013424:intron | 35.0% | |
| ! | ACGGAATACTATTTTATCCG+AGG | - | chr3.4:85730126-85730145 | MS.gene013424:intron | 35.0% |
| ! | AGGTTTCTAAAAAGATGCCT+CGG | + | chr3.4:85730146-85730165 | None:intergenic | 35.0% |
| ! | CTCTTATGGTTGTTATTACC+TGG | - | chr3.4:85730792-85730811 | MS.gene013424:intron | 35.0% |
| ! | CTTTGGTGATAGTAGTTTGT+TGG | - | chr3.4:85731246-85731265 | MS.gene013424:intron | 35.0% |
| ! | TCTTAGAGCTGATGATAATG+GGG | - | chr3.4:85728897-85728916 | MS.gene013424:CDS | 35.0% |
| ! | TTGTTAAAGACATTTTCCCC+AGG | + | chr3.4:85730550-85730569 | None:intergenic | 35.0% |
| ! | TTTTGTGTCTCGAAATCCAA+TGG | + | chr3.4:85731077-85731096 | None:intergenic | 35.0% |
| !! | TCATAGTACTTTTGACTCTG+AGG | + | chr3.4:85730166-85730185 | None:intergenic | 35.0% |
| !! | TGATAATGGGGAAGGTAATA+AGG | - | chr3.4:85728909-85728928 | MS.gene013424:CDS | 35.0% |
| !!! | AGATATAGGTTTTGGGGTTT+TGG | + | chr3.4:85730066-85730085 | None:intergenic | 35.0% |
| !!! | GCACACTTTCTTTTGTTTTC+TGG | - | chr3.4:85728833-85728852 | MS.gene013424:CDS | 35.0% |
| AACAACGTGCCTAACTTCTT+TGG | - | chr3.4:85731229-85731248 | MS.gene013424:intron | 40.0% | |
| AAGAAGCTGGCACTTAACTA+TGG | - | chr3.4:85732202-85732221 | MS.gene013424:intron | 40.0% | |
| AAGTGCAGGATATACCAGAA+AGG | + | chr3.4:85730597-85730616 | None:intergenic | 40.0% | |
| ACCAGTATGAAGCAAGTGAT+GGG | + | chr3.4:85729742-85729761 | None:intergenic | 40.0% | |
| ACCTCCAATAAAGAAACTGG+GGG | + | chr3.4:85732280-85732299 | None:intergenic | 40.0% | |
| ACTTGTATGGTAATTGGGGA+TGG | - | chr3.4:85729219-85729238 | MS.gene013424:CDS | 40.0% | |
| AGTTCGAACTCATATACTCC+TGG | + | chr3.4:85729362-85729381 | None:intergenic | 40.0% | |
| ATAAACCAGAGCCAATCTCT+TGG | - | chr3.4:85730947-85730966 | MS.gene013424:CDS | 40.0% | |
| ATAAGTGGATGGCTGTCTTT+GGG | - | chr3.4:85729943-85729962 | MS.gene013424:CDS | 40.0% | |
| ATATACCTGATGCATTTCCC+AGG | + | chr3.4:85731102-85731121 | None:intergenic | 40.0% | |
| ATGGCAATGAATACCTGGAA+CGG | + | chr3.4:85730696-85730715 | None:intergenic | 40.0% | |
| ATGTTCCACTGATGATTGCT+TGG | + | chr3.4:85730919-85730938 | None:intergenic | 40.0% | |
| ATTTCGAGACACAAAACACC+TGG | - | chr3.4:85731081-85731100 | MS.gene013424:CDS | 40.0% | |
| CACTATGGTACACATAAGGT+TGG | - | chr3.4:85729781-85729800 | MS.gene013424:CDS | 40.0% | |
| CATATACAACACCAAGACTC+TGG | + | chr3.4:85728726-85728745 | None:intergenic | 40.0% | |
| CATTGTGAAATAAGGGGGAT+AGG | + | chr3.4:85729276-85729295 | None:intergenic | 40.0% | |
| CCAACCTCCAATAAAGAAAC+TGG | + | chr3.4:85732283-85732302 | None:intergenic | 40.0% | |
| CCAGTTTCTTTATTGGAGGT+TGG | - | chr3.4:85732280-85732299 | MS.gene013424:CDS | 40.0% | |
| CTATAAGATCGATGAGTAGC+AGG | + | chr3.4:85731692-85731711 | None:intergenic | 40.0% | |
| CTATGTATTGCTGTCACCAT+TGG | - | chr3.4:85731058-85731077 | MS.gene013424:CDS | 40.0% | |
| CTGCTACTCATCGATCTTAT+AGG | - | chr3.4:85731690-85731709 | MS.gene013424:CDS | 40.0% | |
| CTTCTGATTGTGGTTCTTCT+TGG | - | chr3.4:85729195-85729214 | MS.gene013424:CDS | 40.0% | |
| CTTTACTTACTCCGGATTAC+TGG | - | chr3.4:85729403-85729422 | MS.gene013424:CDS | 40.0% | |
| GAAGTGATTACTTACACTGG+TGG | + | chr3.4:85729572-85729591 | None:intergenic | 40.0% | |
| GATAGGATTCTTACCCGAAA+TGG | + | chr3.4:85729259-85729278 | None:intergenic | 40.0% | |
| GCACACAAAGTCAACACATA+AGG | + | chr3.4:85730404-85730423 | None:intergenic | 40.0% | |
| GCTGGTATTGCTTTCATTCT+TGG | - | chr3.4:85732139-85732158 | MS.gene013424:CDS | 40.0% | |
| GGTTCTTCTTGGTACTTGTA+TGG | - | chr3.4:85729206-85729225 | MS.gene013424:CDS | 40.0% | |
| GTTATGCTCTTATAGACCTG+GGG | - | chr3.4:85730531-85730550 | MS.gene013424:intron | 40.0% | |
| TAATCATTAGGAAGAGGGCA+AGG | + | chr3.4:85731385-85731404 | None:intergenic | 40.0% | |
| TAGTGAGATCAGTGAACACA+AGG | + | chr3.4:85731532-85731551 | None:intergenic | 40.0% | |
| TCTGTTAAGCTTTGCACACT+TGG | + | chr3.4:85731977-85731996 | None:intergenic | 40.0% | |
| TGTTATTGAGATGGAACCGA+TGG | - | chr3.4:85731997-85732016 | MS.gene013424:CDS | 40.0% | |
| TTACTTACTCCGGATTACTG+GGG | - | chr3.4:85729405-85729424 | MS.gene013424:CDS | 40.0% | |
| TTCTTTATTGGAGGTTGGCA+TGG | - | chr3.4:85732285-85732304 | MS.gene013424:CDS | 40.0% | |
| TTGGAAGACTATTCTGCTAC+TGG | - | chr3.4:85728696-85728715 | MS.gene013424:CDS | 40.0% | |
| TTTCGAGACACAAAACACCT+GGG | - | chr3.4:85731082-85731101 | MS.gene013424:CDS | 40.0% | |
| ! | ATGATTGGTATCGAACTCGT+GGG | - | chr3.4:85731804-85731823 | MS.gene013424:CDS | 40.0% |
| ! | CTAGTGAAACCTTGTTGTGA+AGG | + | chr3.4:85731454-85731473 | None:intergenic | 40.0% |
| ! | GAAGCTATGTTTGCTGATCT+TGG | - | chr3.4:85730431-85730450 | MS.gene013424:intron | 40.0% |
| ! | GTAGTTTTCTCAGCAGTATC+TGG | - | chr3.4:85729516-85729535 | MS.gene013424:CDS | 40.0% |
| ! | TATGATTGGTATCGAACTCG+TGG | - | chr3.4:85731803-85731822 | MS.gene013424:CDS | 40.0% |
| ! | TGGGAATAGTATGAGCATTG+AGG | - | chr3.4:85731823-85731842 | MS.gene013424:intron | 40.0% |
| !! | AGAGTTCTGAAAACCAGGAA+AGG | + | chr3.4:85730776-85730795 | None:intergenic | 40.0% |
| !! | AGCTATTCTAGCTTCTGTTG+TGG | - | chr3.4:85730889-85730908 | MS.gene013424:CDS | 40.0% |
| !! | AGTATGAGCATTGAGGATGA+TGG | - | chr3.4:85731830-85731849 | MS.gene013424:intron | 40.0% |
| !! | CAGAGTCTTGGTGTTGTATA+TGG | - | chr3.4:85728724-85728743 | MS.gene013424:CDS | 40.0% |
| !! | CCATAAGAGTTCTGAAAACC+AGG | + | chr3.4:85730781-85730800 | None:intergenic | 40.0% |
| !! | CCTGGTTTTCAGAACTCTTA+TGG | - | chr3.4:85730778-85730797 | MS.gene013424:intron | 40.0% |
| !! | CTAGAATGGCTTCTAGCTTT+AGG | - | chr3.4:85731470-85731489 | MS.gene013424:intron | 40.0% |
| !! | CTATTCTAGCTTCTGTTGTG+GGG | - | chr3.4:85730891-85730910 | MS.gene013424:CDS | 40.0% |
| !! | GAAGTGTTGGGATAGTTCAA+AGG | - | chr3.4:85728560-85728579 | MS.gene013424:CDS | 40.0% |
| !! | GCTATTCTAGCTTCTGTTGT+GGG | - | chr3.4:85730890-85730909 | MS.gene013424:CDS | 40.0% |
| !! | TATGTGTTGACTTTGTGTGC+AGG | - | chr3.4:85730404-85730423 | MS.gene013424:CDS | 40.0% |
| AAACACCTGGGAAATGCATC+AGG | - | chr3.4:85731094-85731113 | MS.gene013424:CDS | 45.0% | |
| AGCAAACCTCACTCGTCTTT+CGG | + | chr3.4:85732032-85732051 | None:intergenic | 45.0% | |
| AGTAGCCATGTCAGCACAAT+TGG | + | chr3.4:85729820-85729839 | None:intergenic | 45.0% | |
| ATTCTTACCCGAAATGGCTG+GGG | + | chr3.4:85729253-85729272 | None:intergenic | 45.0% | |
| CAACATCTTGATGAACGTCG+CGG | + | chr3.4:85731736-85731755 | None:intergenic | 45.0% | |
| CACCAGTATGAAGCAAGTGA+TGG | + | chr3.4:85729743-85729762 | None:intergenic | 45.0% | |
| CTACTGTGCATTAGCACACT+TGG | - | chr3.4:85729835-85729854 | MS.gene013424:CDS | 45.0% | |
| CTTTATGCTGCTCAAGAAGC+TGG | - | chr3.4:85732121-85732140 | MS.gene013424:CDS | 45.0% | |
| GATAAGTGGATGGCTGTCTT+TGG | - | chr3.4:85729942-85729961 | MS.gene013424:CDS | 45.0% | |
| GATTCTTACCCGAAATGGCT+GGG | + | chr3.4:85729254-85729273 | None:intergenic | 45.0% | |
| GCACGTTGTTACCAACATCA+CGG | + | chr3.4:85731219-85731238 | None:intergenic | 45.0% | |
| GCAGATTGCATTCACCTTTC+TGG | - | chr3.4:85730580-85730599 | MS.gene013424:intron | 45.0% | |
| GCATACTGCTCTTCTGATTG+TGG | - | chr3.4:85729185-85729204 | MS.gene013424:CDS | 45.0% | |
| GGTTCCCCCAGTTTCTTTAT+TGG | - | chr3.4:85732273-85732292 | MS.gene013424:intron | 45.0% | |
| GTGGTGTTTCTTGGACATGA+TGG | + | chr3.4:85729553-85729572 | None:intergenic | 45.0% | |
| GTGTTCACTGATCTCACTAC+CGG | - | chr3.4:85731533-85731552 | MS.gene013424:intron | 45.0% | |
| TCATCAGCATGCTGTCTGTT+TGG | + | chr3.4:85729081-85729100 | None:intergenic | 45.0% | |
| TCATGTATGTGTGGCTATGC+AGG | - | chr3.4:85729000-85729019 | MS.gene013424:CDS | 45.0% | |
| TCCAAGCTTAGGAATTGCCA+GGG | - | chr3.4:85731493-85731512 | MS.gene013424:intron | 45.0% | |
| TCCCATCACTTGCTTCATAC+TGG | - | chr3.4:85729738-85729757 | MS.gene013424:intron | 45.0% | |
| TCCCCCAGTTTCTTTATTGG+AGG | - | chr3.4:85732276-85732295 | MS.gene013424:intron | 45.0% | |
| TGAAAGTGAGACAAGGTCTG+AGG | - | chr3.4:85732066-85732085 | MS.gene013424:CDS | 45.0% | |
| TGAACACAAGGCCTATTCCA+GGG | + | chr3.4:85731520-85731539 | None:intergenic | 45.0% | |
| TTGGGAAACAGCCAAGAGAT+TGG | + | chr3.4:85730961-85730980 | None:intergenic | 45.0% | |
| ! | CTACAAGGTACCTCTCTTCA+GGG | + | chr3.4:85731658-85731677 | None:intergenic | 45.0% |
| ! | CTTACACTGGTGGTGTTTCT+TGG | + | chr3.4:85729562-85729581 | None:intergenic | 45.0% |
| ! | TACAAGGTACCTCTCTTCAG+GGG | + | chr3.4:85731657-85731676 | None:intergenic | 45.0% |
| ! | TGGCTGTTTCCCAAGAGTTA+AGG | - | chr3.4:85730967-85730986 | MS.gene013424:CDS | 45.0% |
| ! | TTGCTCCAATTGTGCTGACA+TGG | - | chr3.4:85729812-85729831 | MS.gene013424:CDS | 45.0% |
| !! | AGAGCTGATGATAATGGGGA+AGG | - | chr3.4:85728901-85728920 | MS.gene013424:CDS | 45.0% |
| !! | CTAGCTTTAGGTCCAAGCTT+AGG | - | chr3.4:85731482-85731501 | MS.gene013424:intron | 45.0% |
| !!! | ACTAGCTTTTGCAGCCAACA+AGG | - | chr3.4:85731902-85731921 | MS.gene013424:intron | 45.0% |
| AATCCTACAGACACGCTACC+TGG | + | chr3.4:85731953-85731972 | None:intergenic | 50.0% | |
| ACAAAGCGGGAGAAATTCGC+TGG | + | chr3.4:85731563-85731582 | None:intergenic | 50.0% | |
| ACCCTGGCAATTCCTAAGCT+TGG | + | chr3.4:85731497-85731516 | None:intergenic | 50.0% | |
| ACTAGGACACGGTGATATGC+AGG | + | chr3.4:85731596-85731615 | None:intergenic | 50.0% | |
| AGCAGTGATGACCGTGATGT+TGG | - | chr3.4:85731205-85731224 | MS.gene013424:intron | 50.0% | |
| AGCTACTATGTCTCCGTTCC+AGG | - | chr3.4:85730680-85730699 | MS.gene013424:intron | 50.0% | |
| AGTGCTTACCCCAGCCATTT+CGG | - | chr3.4:85729242-85729261 | MS.gene013424:CDS | 50.0% | |
| CAAAGCGGGAGAAATTCGCT+GGG | + | chr3.4:85731562-85731581 | None:intergenic | 50.0% | |
| CTAGGACACGGTGATATGCA+GGG | + | chr3.4:85731595-85731614 | None:intergenic | 50.0% | |
| CTCATGTAACCCCTGAAGAG+AGG | - | chr3.4:85731645-85731664 | MS.gene013424:CDS | 50.0% | |
| CTCTCTTCAGGGGTTACATG+AGG | + | chr3.4:85731647-85731666 | None:intergenic | 50.0% | |
| GCAAACCTCACTCGTCTTTC+GGG | + | chr3.4:85732031-85732050 | None:intergenic | 50.0% | |
| GGAACCTTAAGTGACACGTC+AGG | + | chr3.4:85732259-85732278 | None:intergenic | 50.0% | |
| GGATTCTTACCCGAAATGGC+TGG | + | chr3.4:85729255-85729274 | None:intergenic | 50.0% | |
| GTCCAAGCTTAGGAATTGCC+AGG | - | chr3.4:85731492-85731511 | MS.gene013424:intron | 50.0% | |
| GTGAACACAAGGCCTATTCC+AGG | + | chr3.4:85731521-85731540 | None:intergenic | 50.0% | |
| TCACTGACAAAGTTCCGCGA+GGG | - | chr3.4:85731341-85731360 | MS.gene013424:intron | 50.0% | |
| TCAGGGGTTACATGAGGAAC+AGG | + | chr3.4:85731641-85731660 | None:intergenic | 50.0% | |
| TCATTAGGAAGAGGGCAAGG+AGG | + | chr3.4:85731382-85731401 | None:intergenic | 50.0% | |
| TGTATGTGTGGCTATGCAGG+TGG | - | chr3.4:85729003-85729022 | MS.gene013424:CDS | 50.0% | |
| TTAACCCTTCGATTTCCGGG+AGG | + | chr3.4:85729439-85729458 | None:intergenic | 50.0% | |
| TTCACTGACAAAGTTCCGCG+AGG | - | chr3.4:85731340-85731359 | MS.gene013424:intron | 50.0% | |
| ! | AACAGCCAAGAGATTGGCTC+TGG | + | chr3.4:85730955-85730974 | None:intergenic | 50.0% |
| ! | AGTGAGACAAGGTCTGAGGT+TGG | - | chr3.4:85732070-85732089 | MS.gene013424:CDS | 50.0% |
| ! | CCTACAAGGTACCTCTCTTC+AGG | + | chr3.4:85731659-85731678 | None:intergenic | 50.0% |
| ! | GCTGACTCTCGTATCCTTGT+TGG | + | chr3.4:85731919-85731938 | None:intergenic | 50.0% |
| ! | TTGAACCTGGGAGGAAGTGT+TGG | - | chr3.4:85728547-85728566 | MS.gene013424:CDS | 50.0% |
| !! | CCTGAAGAGAGGTACCTTGT+AGG | - | chr3.4:85731656-85731675 | MS.gene013424:CDS | 50.0% |
| !! | CTACTGGCTTACCAGAGTCT+TGG | - | chr3.4:85728712-85728731 | MS.gene013424:CDS | 50.0% |
| !! | CTCAGCAGTATCTGGTCTTG+AGG | - | chr3.4:85729524-85729543 | MS.gene013424:CDS | 50.0% |
| !! | TGAACCTGGGAGGAAGTGTT+GGG | - | chr3.4:85728548-85728567 | MS.gene013424:CDS | 50.0% |
| !! | TGAGGTTGGTGTGCAAATGC+AGG | - | chr3.4:85732084-85732103 | MS.gene013424:CDS | 50.0% |
| ACGGTGATATGCAGGGAGGT+TGG | + | chr3.4:85731588-85731607 | None:intergenic | 55.0% | |
| AGGAAGAGGGCAAGGAGGAT+TGG | + | chr3.4:85731377-85731396 | None:intergenic | 55.0% | |
| AGTCAGCAAAGTGTGCAGCC+AGG | - | chr3.4:85731932-85731951 | MS.gene013424:intron | 55.0% | |
| AGTGGATGGCTGTCTTTGGG+TGG | - | chr3.4:85729946-85729965 | MS.gene013424:CDS | 55.0% | |
| ATTGCCAGGGTCCCTGGAAT+AGG | - | chr3.4:85731506-85731525 | MS.gene013424:intron | 55.0% | |
| CCTTCCTCCCGGAAATCGAA+GGG | - | chr3.4:85729432-85729451 | MS.gene013424:CDS | 55.0% | |
| CCTTCGATTTCCGGGAGGAA+GGG | + | chr3.4:85729434-85729453 | None:intergenic | 55.0% | |
| CGGTTTAGGTCGAATCGACC+AGG | - | chr3.4:85729341-85729360 | MS.gene013424:CDS | 55.0% | |
| CTATCCCAACACTTCCTCCC+AGG | + | chr3.4:85728555-85728574 | None:intergenic | 55.0% | |
| CTTACTCCGGATTACTGGGG+CGG | - | chr3.4:85729408-85729427 | MS.gene013424:CDS | 55.0% | |
| GATGAGTAGCAGGTCCTACG+CGG | + | chr3.4:85731682-85731701 | None:intergenic | 55.0% | |
| GGAGAAATTCGCTGGGATGC+CGG | + | chr3.4:85731555-85731574 | None:intergenic | 55.0% | |
| GGGAGCCAAGCAATCATCAG+TGG | - | chr3.4:85730911-85730930 | MS.gene013424:CDS | 55.0% | |
| GTGCTTACCCCAGCCATTTC+GGG | - | chr3.4:85729243-85729262 | MS.gene013424:CDS | 55.0% | |
| TTAGGAATTGCCAGGGTCCC+TGG | - | chr3.4:85731500-85731519 | MS.gene013424:intron | 55.0% | |
| ! | TGCAGAAAGCGTGAGATGGC+CGG | - | chr3.4:85730856-85730875 | MS.gene013424:intron | 55.0% |
| ! | TGGCTGCAGAAAGCGTGAGA+TGG | - | chr3.4:85730852-85730871 | MS.gene013424:intron | 55.0% |
| !! | AGGGAGGTTGGTGACAAAGC+GGG | + | chr3.4:85731576-85731595 | None:intergenic | 55.0% |
| !! | AGGGCCTGACGTGTCACTTA+AGG | - | chr3.4:85732252-85732271 | MS.gene013424:intron | 55.0% |
| !! | CAGGGAGGTTGGTGACAAAG+CGG | + | chr3.4:85731577-85731596 | None:intergenic | 55.0% |
| AAGGCCTATTCCAGGGACCC+TGG | + | chr3.4:85731513-85731532 | None:intergenic | 60.0% | |
| AGGTACCTTGTAGGCCGCGT+AGG | - | chr3.4:85731665-85731684 | MS.gene013424:CDS | 60.0% | |
| CAGCCAGGTAGCGTGTCTGT+AGG | - | chr3.4:85731947-85731966 | MS.gene013424:CDS | 60.0% | |
| CCCTTCCTCCCGGAAATCGA+AGG | - | chr3.4:85729431-85729450 | MS.gene013424:CDS | 60.0% | |
| CCCTTCGATTTCCGGGAGGA+AGG | + | chr3.4:85729435-85729454 | None:intergenic | 60.0% | |
| CTTTCGGGCGCAGCATCCAT+CGG | + | chr3.4:85732016-85732035 | None:intergenic | 60.0% | |
| GGACACGGTGATATGCAGGG+AGG | + | chr3.4:85731592-85731611 | None:intergenic | 60.0% | |
| ! | TTGGTAGCCAAGCACCCTCG+CGG | + | chr3.4:85731358-85731377 | None:intergenic | 60.0% |
| !! | CAAAGTTCCGCGAGGGTGCT+TGG | - | chr3.4:85731348-85731367 | MS.gene013424:intron | 60.0% |
| CAGGTCCTACGCGGCCTACA+AGG | + | chr3.4:85731673-85731692 | None:intergenic | 65.0% | |
| CTGCGCCCGAAAGACGAGTG+AGG | - | chr3.4:85732023-85732042 | MS.gene013424:CDS | 65.0% | |
| GAAGGGCCGCCCCAGTAATC+CGG | + | chr3.4:85729417-85729436 | None:intergenic | 65.0% | |
| ACTGGGGCGGCCCTTCCTCC+CGG | - | chr3.4:85729421-85729440 | MS.gene013424:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 85728540 | 85732321 | 85728540 | ID=MS.gene013424 |
| chr3.4 | mRNA | 85728540 | 85732321 | 85728540 | ID=MS.gene013424.t1;Parent=MS.gene013424 |
| chr3.4 | exon | 85732280 | 85732321 | 85732280 | ID=MS.gene013424.t1.exon1;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85732280 | 85732321 | 85732280 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85731939 | 85732173 | 85731939 | ID=MS.gene013424.t1.exon2;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85731939 | 85732173 | 85731939 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85731597 | 85731839 | 85731597 | ID=MS.gene013424.t1.exon3;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85731597 | 85731839 | 85731597 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85731285 | 85731341 | 85731285 | ID=MS.gene013424.t1.exon4;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85731285 | 85731341 | 85731285 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85730873 | 85731133 | 85730873 | ID=MS.gene013424.t1.exon5;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85730873 | 85731133 | 85730873 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85730383 | 85730435 | 85730383 | ID=MS.gene013424.t1.exon6;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85730383 | 85730435 | 85730383 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85730160 | 85730277 | 85730160 | ID=MS.gene013424.t1.exon7;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85730160 | 85730277 | 85730160 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85729746 | 85730000 | 85729746 | ID=MS.gene013424.t1.exon8;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85729746 | 85730000 | 85729746 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| chr3.4 | exon | 85728540 | 85729660 | 85728540 | ID=MS.gene013424.t1.exon9;Parent=MS.gene013424.t1 |
| chr3.4 | CDS | 85728540 | 85729660 | 85728540 | ID=cds.MS.gene013424.t1;Parent=MS.gene013424.t1 |
| Gene Sequence |
| Protein sequence |
