Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06523.t1 | XP_013461519.1 | 93.5 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.00E+00 | 1455.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06523.t1 | O22881 | 72.5 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0e+00 | 1124.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06523.t1 | A0A072V0K3 | 93.5 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.0e+00 | 1455.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049395 | MS.gene06523 | 0.845826 | 3.19E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene50194 | MS.gene06523 | PPI |
MS.gene016996 | MS.gene06523 | PPI |
MS.gene54170 | MS.gene06523 | PPI |
MS.gene038119 | MS.gene06523 | PPI |
MS.gene06523 | MS.gene47702 | PPI |
MS.gene06523 | MS.gene57004 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06523.t1 | MTR_3g094090 | 93.451 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.0 | 1513 |
MS.gene06523.t1 | MTR_3g094090 | 92.118 | 609 | 2 | 1 | 186 | 748 | 1 | 609 | 0.0 | 1144 |
MS.gene06523.t1 | MTR_6g007697 | 59.137 | 788 | 241 | 9 | 14 | 746 | 13 | 774 | 0.0 | 937 |
MS.gene06523.t1 | MTR_5g034500 | 55.569 | 808 | 273 | 11 | 1 | 748 | 1 | 782 | 0.0 | 883 |
MS.gene06523.t1 | MTR_6g033165 | 50.993 | 806 | 301 | 11 | 6 | 748 | 45 | 819 | 0.0 | 784 |
MS.gene06523.t1 | MTR_5g071860 | 49.424 | 781 | 301 | 11 | 14 | 746 | 18 | 752 | 0.0 | 755 |
MS.gene06523.t1 | MTR_5g071630 | 46.173 | 797 | 302 | 16 | 3 | 746 | 1 | 723 | 0.0 | 683 |
MS.gene06523.t1 | MTR_8g099090 | 44.289 | 788 | 368 | 10 | 14 | 746 | 19 | 790 | 0.0 | 671 |
MS.gene06523.t1 | MTR_5g071827 | 48.028 | 710 | 275 | 11 | 85 | 746 | 1 | 664 | 0.0 | 664 |
MS.gene06523.t1 | MTR_2g438150 | 43.734 | 798 | 363 | 9 | 1 | 748 | 28 | 789 | 0.0 | 645 |
MS.gene06523.t1 | MTR_2g438150 | 43.609 | 798 | 364 | 9 | 1 | 748 | 28 | 789 | 0.0 | 642 |
MS.gene06523.t1 | MTR_4g094660 | 43.500 | 800 | 360 | 13 | 1 | 748 | 28 | 787 | 0.0 | 622 |
MS.gene06523.t1 | MTR_4g099260 | 41.625 | 800 | 385 | 11 | 1 | 746 | 42 | 813 | 0.0 | 613 |
MS.gene06523.t1 | MTR_8g107510 | 40.996 | 783 | 397 | 9 | 13 | 745 | 12 | 779 | 0.0 | 608 |
MS.gene06523.t1 | MTR_8g063840 | 42.125 | 781 | 373 | 11 | 18 | 748 | 89 | 840 | 0.0 | 587 |
MS.gene06523.t1 | MTR_8g022130 | 40.409 | 782 | 353 | 11 | 11 | 746 | 50 | 764 | 0.0 | 574 |
MS.gene06523.t1 | MTR_7g108480 | 39.336 | 783 | 357 | 9 | 13 | 746 | 58 | 771 | 0.0 | 568 |
MS.gene06523.t1 | MTR_2g008820 | 39.309 | 781 | 388 | 13 | 22 | 748 | 101 | 849 | 0.0 | 556 |
MS.gene06523.t1 | MTR_2g438160 | 48.500 | 600 | 251 | 7 | 1 | 550 | 28 | 619 | 0.0 | 545 |
MS.gene06523.t1 | MTR_8g088200 | 39.675 | 799 | 398 | 10 | 1 | 746 | 13 | 780 | 0.0 | 540 |
MS.gene06523.t1 | MTR_8g063900 | 43.622 | 635 | 297 | 7 | 12 | 593 | 53 | 679 | 5.33e-180 | 533 |
MS.gene06523.t1 | MTR_5g070670 | 38.570 | 783 | 391 | 14 | 22 | 748 | 101 | 849 | 1.23e-168 | 507 |
MS.gene06523.t1 | MTR_4g094660 | 41.693 | 638 | 285 | 10 | 161 | 748 | 1 | 601 | 7.74e-158 | 471 |
MS.gene06523.t1 | MTR_5g034590 | 63.566 | 129 | 47 | 0 | 421 | 549 | 132 | 260 | 2.06e-53 | 189 |
MS.gene06523.t1 | MTR_5g034590 | 34.574 | 188 | 92 | 6 | 84 | 240 | 5 | 192 | 1.80e-17 | 85.5 |
MS.gene06523.t1 | MTR_8g022160 | 52.632 | 171 | 76 | 2 | 11 | 181 | 50 | 215 | 2.05e-51 | 180 |
MS.gene06523.t1 | MTR_1g029310 | 35.938 | 128 | 73 | 3 | 171 | 298 | 12 | 130 | 1.83e-16 | 77.0 |
MS.gene06523.t1 | MTR_6g045057 | 37.342 | 158 | 91 | 5 | 176 | 331 | 8 | 159 | 6.53e-14 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
MS.gene06523.t1 | AT5G14880 | 59.241 | 790 | 246 | 13 | 14 | 748 | 13 | 781 | 0.0 | 900 |
MS.gene06523.t1 | AT1G70300 | 57.143 | 805 | 265 | 11 | 1 | 748 | 1 | 782 | 0.0 | 892 |
MS.gene06523.t1 | AT3G02050 | 51.403 | 784 | 317 | 9 | 17 | 748 | 18 | 789 | 0.0 | 741 |
MS.gene06523.t1 | AT4G23640 | 46.752 | 785 | 355 | 7 | 12 | 746 | 2 | 773 | 0.0 | 692 |
MS.gene06523.t1 | AT2G30070 | 54.516 | 609 | 227 | 5 | 14 | 575 | 18 | 623 | 0.0 | 683 |
MS.gene06523.t1 | AT2G30070 | 61.111 | 72 | 28 | 0 | 677 | 748 | 641 | 712 | 1.04e-18 | 91.3 |
MS.gene06523.t1 | AT1G31120 | 43.860 | 798 | 362 | 11 | 1 | 748 | 35 | 796 | 0.0 | 615 |
MS.gene06523.t1 | AT4G19960 | 44.560 | 772 | 353 | 9 | 26 | 748 | 62 | 807 | 0.0 | 613 |
MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
MS.gene06523.t1 | AT2G35060 | 44.180 | 799 | 354 | 14 | 1 | 748 | 36 | 793 | 0.0 | 605 |
MS.gene06523.t1 | AT1G60160 | 42.516 | 795 | 349 | 15 | 14 | 748 | 81 | 827 | 0.0 | 603 |
MS.gene06523.t1 | AT4G19960 | 43.108 | 798 | 353 | 10 | 26 | 748 | 62 | 833 | 0.0 | 600 |
MS.gene06523.t1 | AT4G19960 | 43.401 | 788 | 355 | 11 | 26 | 748 | 62 | 823 | 0.0 | 597 |
MS.gene06523.t1 | AT4G13420 | 39.649 | 797 | 377 | 10 | 3 | 746 | 38 | 783 | 0.0 | 594 |
MS.gene06523.t1 | AT2G30070 | 52.277 | 505 | 191 | 5 | 118 | 575 | 2 | 503 | 0.0 | 540 |
MS.gene06523.t1 | AT2G30070 | 61.111 | 72 | 28 | 0 | 677 | 748 | 521 | 592 | 6.78e-19 | 91.7 |
MS.gene06523.t1 | AT4G33530 | 39.203 | 778 | 394 | 12 | 22 | 748 | 106 | 855 | 4.51e-180 | 537 |
MS.gene06523.t1 | AT5G09400 | 38.951 | 801 | 395 | 14 | 2 | 748 | 98 | 858 | 1.57e-176 | 528 |
MS.gene06523.t1 | AT4G19960 | 42.359 | 602 | 278 | 6 | 195 | 748 | 6 | 586 | 4.11e-157 | 468 |
MS.gene06523.t1 | AT4G33530 | 36.250 | 640 | 333 | 9 | 158 | 748 | 14 | 627 | 1.76e-141 | 429 |
Find 175 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGATTGCATTCACCTTTC+TGG | 0.122911 | 3.2:-78864510 | MS.gene06523:intron |
TGCACTTATATTGGCATATA+TGG | 0.141485 | 3.2:-78864480 | MS.gene06523:CDS |
CTTGGTACTTGTATGGTAAT+TGG | 0.184251 | 3.2:-78866294 | MS.gene06523:CDS |
GAGACTAATGAAGAGATTTA+TGG | 0.198641 | 3.2:-78866696 | MS.gene06523:CDS |
TTTACATCCCAGAAATTAAT+TGG | 0.199713 | 3.2:-78864067 | MS.gene06523:CDS |
TCTTGGTCATTTCAATTATA+TGG | 0.206069 | 3.2:-78864643 | MS.gene06523:CDS |
GCTGGTATTGCTTTCATTCT+TGG | 0.223882 | 3.2:-78862951 | MS.gene06523:CDS |
TTGGTACTTGTATGGTAATT+GGG | 0.231362 | 3.2:-78866293 | MS.gene06523:CDS |
CTAGAATGGCTTCTAGCTTT+AGG | 0.240333 | 3.2:-78863620 | MS.gene06523:CDS |
TTTCAATTATATGGCCATTC+AGG | 0.245101 | 3.2:-78864634 | MS.gene06523:intron |
CTCTTTATTCATTGATTTGT+AGG | 0.245636 | 3.2:-78866473 | MS.gene06523:CDS |
GCAAACCTCACTCGTCTTTC+GGG | 0.247609 | 3.2:+78863062 | None:intergenic |
CAGAGTCTTGGTGTTGTATA+TGG | 0.249792 | 3.2:-78866783 | MS.gene06523:CDS |
CTTCTGATTGTGGTTCTTCT+TGG | 0.250106 | 3.2:-78866312 | MS.gene06523:CDS |
GGTATATCCTGCACTTATAT+TGG | 0.277914 | 3.2:-78864489 | MS.gene06523:CDS |
GTGCTTACCCCAGCCATTTC+CGG | 0.289029 | 3.2:-78866264 | MS.gene06523:intron |
GCTGACTCTCATATCCTTGT+TGG | 0.294680 | 3.2:+78863174 | None:intergenic |
CTGCTACTCATCGATCTTAT+AGG | 0.300540 | 3.2:-78863400 | MS.gene06523:CDS |
AGCTACTATGTCTCCGTTCC+AGG | 0.305722 | 3.2:-78864410 | MS.gene06523:intron |
CCAACCTCCAATAAAGAAAC+TGG | 0.307237 | 3.2:+78862810 | None:intergenic |
ATGAGCATCCAATTAATTTC+TGG | 0.307961 | 3.2:+78864059 | None:intergenic |
AGCAAACCTCACTCGTCTTT+CGG | 0.311992 | 3.2:+78863061 | None:intergenic |
TTCTTAGAGCTGATGATAAT+GGG | 0.314821 | 3.2:-78866611 | MS.gene06523:CDS |
CCTACAAGGTACCTCTCTTC+AGG | 0.321296 | 3.2:+78863434 | None:intergenic |
GGAATATTACTTTGTATAAC+AGG | 0.322568 | 3.2:-78865543 | MS.gene06523:intron |
GAAGCTATGTTTGCTGATCT+TGG | 0.331982 | 3.2:-78864660 | MS.gene06523:CDS |
TAATGATTATAATGCTCATT+TGG | 0.343435 | 3.2:-78863694 | MS.gene06523:CDS |
GCTATTCTAGCTTCTGTTGT+GGG | 0.351333 | 3.2:-78864200 | MS.gene06523:CDS |
TCCCATCACTTGCTTCATAC+TGG | 0.360782 | 3.2:-78865772 | MS.gene06523:CDS |
AGTAGCCATGTCAGCACAAT+TGG | 0.368461 | 3.2:+78865693 | None:intergenic |
GTTCTTAGAGCTGATGATAA+TGG | 0.369896 | 3.2:-78866612 | MS.gene06523:CDS |
GATAAGTGGATGGCTGTCTT+TGG | 0.370262 | 3.2:-78865568 | MS.gene06523:CDS |
AAGAAGCTGGCACTTAACTA+TGG | 0.372161 | 3.2:-78862888 | MS.gene06523:CDS |
GGTTCTTCTTGGTACTTGTA+TGG | 0.373021 | 3.2:-78866301 | MS.gene06523:CDS |
AGTTACAGATTAACTGTGAT+TGG | 0.377036 | 3.2:-78863215 | MS.gene06523:CDS |
AATTTAGAATACTCTTTCTC+TGG | 0.377126 | 3.2:+78866375 | None:intergenic |
TGGCTGTTTCCCAAGAGTTA+AGG | 0.392383 | 3.2:-78864123 | MS.gene06523:CDS |
TCATCAGCATGCTGTCTGTT+TGG | 0.393866 | 3.2:+78866429 | None:intergenic |
TATAGGTGTATAGTAAGATA+TGG | 0.400337 | 3.2:-78863383 | MS.gene06523:CDS |
TGAGCATCCAATTAATTTCT+GGG | 0.403364 | 3.2:+78864060 | None:intergenic |
TCTGTTAAGCTTTGCACACT+TGG | 0.403454 | 3.2:+78863116 | None:intergenic |
GAGTTCGATACCAATCATAT+TGG | 0.413900 | 3.2:+78863291 | None:intergenic |
TTGTTTGCACTTCAACACTA+TGG | 0.414430 | 3.2:-78865744 | MS.gene06523:CDS |
ATTGCCAGGGTCCCTGGAAT+AGG | 0.415229 | 3.2:-78863584 | MS.gene06523:CDS |
ACAACAAGGTTTCACTAGAA+TGG | 0.419139 | 3.2:-78863634 | MS.gene06523:CDS |
TTGGAAGACTATTCTGCTAC+TGG | 0.426942 | 3.2:-78866811 | MS.gene06523:CDS |
TTCTTTATTGGAGGTTGGCA+TGG | 0.427269 | 3.2:-78862805 | MS.gene06523:CDS |
GATAGGATTCTTACCGGAAA+TGG | 0.427379 | 3.2:+78866251 | None:intergenic |
CCAGTTTCTTTATTGGAGGT+TGG | 0.427965 | 3.2:-78862810 | MS.gene06523:CDS |
GTATGAACAACCTTAACTCT+TGG | 0.428073 | 3.2:+78864113 | None:intergenic |
AGCACTTTCTTCATATAAGA+TGG | 0.430100 | 3.2:-78866406 | MS.gene06523:CDS |
CTATGTATTGCTGTCACCAT+TGG | 0.435178 | 3.2:-78864032 | MS.gene06523:CDS |
ATAAGTGGATGGCTGTCTTT+GGG | 0.443805 | 3.2:-78865567 | MS.gene06523:CDS |
CCTGAAGAGAGGTACCTTGT+AGG | 0.443876 | 3.2:-78863434 | MS.gene06523:CDS |
GGATTCTTACCGGAAATGGC+TGG | 0.446902 | 3.2:+78866255 | None:intergenic |
AAATGAGCATTATAATCATT+AGG | 0.453239 | 3.2:+78863696 | None:intergenic |
TTAGGAATTGCCAGGGTCCC+TGG | 0.454586 | 3.2:-78863590 | MS.gene06523:CDS |
GTGAACACAAGGCCTATTCC+AGG | 0.455129 | 3.2:+78863572 | None:intergenic |
CAAAGTTCCGCGAGGGTGCT+TGG | 0.456491 | 3.2:-78863742 | MS.gene06523:CDS |
AGGGCCTGACGTGTCACTTA+AGG | 0.456997 | 3.2:-78862838 | MS.gene06523:CDS |
AAACAAATGGATCTTGAACC+TGG | 0.462548 | 3.2:-78866973 | None:intergenic |
TATGAACAACCTTAACTCTT+GGG | 0.463219 | 3.2:+78864114 | None:intergenic |
TCAGGGGTTACATGAGGAAC+AGG | 0.463891 | 3.2:+78863452 | None:intergenic |
GTCCAAGCTTAGGAATTGCC+AGG | 0.464211 | 3.2:-78863598 | MS.gene06523:CDS |
AGGAAGAGGGCAAGGAGGAT+TGG | 0.469920 | 3.2:+78863716 | None:intergenic |
CTAGCTTTAGGTCCAAGCTT+AGG | 0.471303 | 3.2:-78863608 | MS.gene06523:CDS |
CTACAAGGTACCTCTCTTCA+GGG | 0.471608 | 3.2:+78863435 | None:intergenic |
ACTAGGACACGGTGATATGC+AGG | 0.474345 | 3.2:+78863497 | None:intergenic |
GCACTTATATTGGCATATAT+GGG | 0.478501 | 3.2:-78864479 | MS.gene06523:CDS |
AAGAACTTGAACATATAATA+CGG | 0.479223 | 3.2:+78865603 | None:intergenic |
TTGCTCCAATTGTGCTGACA+TGG | 0.480391 | 3.2:-78865698 | MS.gene06523:CDS |
GCATACTGCTCTTCTGATTG+TGG | 0.480604 | 3.2:-78866322 | MS.gene06523:CDS |
ACAAAGCGGGAGAAATTCGC+TGG | 0.480919 | 3.2:+78863530 | None:intergenic |
TTCATCATTCTTGAAGAAGC+TGG | 0.483278 | 3.2:-78862901 | MS.gene06523:CDS |
TTGGGAAACAGCCAAGAGAT+TGG | 0.488433 | 3.2:+78864132 | None:intergenic |
CTCAGCAGTATCTGGTCTTG+AGG | 0.489203 | 3.2:-78865986 | MS.gene06523:CDS |
ACCCTGGCAATTCCTAAGCT+TGG | 0.490023 | 3.2:+78863596 | None:intergenic |
AACAGCCAAGAGATTGGCTC+TGG | 0.490204 | 3.2:+78864138 | None:intergenic |
CTTTATGCTGCTCAAGAAGC+TGG | 0.492942 | 3.2:-78862969 | MS.gene06523:CDS |
TTGAACCTGGGAGGAAGTGT+TGG | 0.499293 | 3.2:-78866960 | MS.gene06523:CDS |
GCGTATATAATATATTCAAA+TGG | 0.503557 | 3.2:-78865653 | MS.gene06523:CDS |
CAGGTCCTACGCGGCCTACA+AGG | 0.504050 | 3.2:+78863420 | None:intergenic |
CTACTGGCTTACCAGAGTCT+TGG | 0.504452 | 3.2:-78866795 | MS.gene06523:CDS |
CTACTGTGCATTAGCACACT+TGG | 0.504767 | 3.2:-78865675 | MS.gene06523:CDS |
CTTAACAGATGTTATTGAGA+TGG | 0.506593 | 3.2:-78863102 | MS.gene06523:CDS |
CTTTCGGGCGCAGCATCCAT+CGG | 0.509696 | 3.2:+78863077 | None:intergenic |
CTATAAGATCGATGAGTAGC+AGG | 0.510208 | 3.2:+78863401 | None:intergenic |
AATCCTACAGACACGCTACC+TGG | 0.511247 | 3.2:+78863140 | None:intergenic |
AGCTATTCTAGCTTCTGTTG+TGG | 0.512141 | 3.2:-78864201 | MS.gene06523:CDS |
CACTATGGTACACATAAGGT+TGG | 0.512279 | 3.2:-78865729 | MS.gene06523:CDS |
TGCAGAAAGCGTGAGATGGC+CGG | 0.514525 | 3.2:-78864234 | MS.gene06523:intron |
ATGTTCCACTGATGATTGCT+TGG | 0.514640 | 3.2:+78864174 | None:intergenic |
TGAACCTGGGAGGAAGTGTT+GGG | 0.514870 | 3.2:-78866959 | MS.gene06523:CDS |
GATTCTTACCGGAAATGGCT+GGG | 0.515007 | 3.2:+78866256 | None:intergenic |
AAACACCTGGGAAATGCATC+AGG | 0.515977 | 3.2:-78863996 | MS.gene06523:intron |
ATGGATATAATTTCTTGAGA+AGG | 0.521502 | 3.2:-78862869 | MS.gene06523:CDS |
GGAGAAATTCGCTGGGATGC+CGG | 0.528570 | 3.2:+78863538 | None:intergenic |
ATAAACCAGAGCCAATCTCT+TGG | 0.536473 | 3.2:-78864143 | MS.gene06523:CDS |
CTATTCTAGCTTCTGTTGTG+GGG | 0.536872 | 3.2:-78864199 | MS.gene06523:CDS |
TGGTACTTGTATGGTAATTG+GGG | 0.541658 | 3.2:-78866292 | MS.gene06523:CDS |
TCAACACTATGGTACACATA+AGG | 0.544559 | 3.2:-78865733 | MS.gene06523:CDS |
GAAGTGTTGGGATAGTTCAA+AGG | 0.545829 | 3.2:-78866947 | MS.gene06523:intron |
CTAGTGAAACCTTGTTGTGA+AGG | 0.546959 | 3.2:+78863639 | None:intergenic |
ACTTGTATGGTAATTGGGGA+TGG | 0.550558 | 3.2:-78866288 | MS.gene06523:CDS |
CAACCTCCAATAAAGAAACT+GGG | 0.551575 | 3.2:+78862811 | None:intergenic |
AGTCAGCAAAGTGTGCAGCC+AGG | 0.551960 | 3.2:-78863158 | MS.gene06523:CDS |
CATATACAACACCAAGACTC+TGG | 0.553981 | 3.2:+78866784 | None:intergenic |
CTATCCCAACACTTCCTCCC+AGG | 0.555040 | 3.2:+78866955 | None:intergenic |
ATATATGCCAATATAAGTGC+AGG | 0.555536 | 3.2:+78864482 | None:intergenic |
ATTTCGAGACACAAAACACC+TGG | 0.555691 | 3.2:-78864009 | MS.gene06523:CDS |
AGGGAGGTTGGTGACAAAGC+GGG | 0.557999 | 3.2:+78863517 | None:intergenic |
TTAGAATACTCTTTCTCTGG+AGG | 0.560946 | 3.2:+78866378 | None:intergenic |
ACTATGGTACACATAAGGTT+GGG | 0.561821 | 3.2:-78865728 | MS.gene06523:CDS |
AACAAATGGATCTTGAACCT+GGG | 0.562805 | 3.2:-78866972 | None:intergenic |
GCATTATAATCATTAGGAAG+AGG | 0.565169 | 3.2:+78863702 | None:intergenic |
TCTTGAGAAGGAATTGTAGA+GGG | 0.569945 | 3.2:-78862857 | MS.gene06523:CDS |
ACCAGTATGAAGCAAGTGAT+GGG | 0.573753 | 3.2:+78865771 | None:intergenic |
TGAGGTTGGTGTGCAAATGC+AGG | 0.574824 | 3.2:-78863006 | MS.gene06523:CDS |
GTGTTCACTGATCTCACTAC+CGG | 0.575606 | 3.2:-78863557 | MS.gene06523:CDS |
TATGATTGGTATCGAACTCG+TGG | 0.577585 | 3.2:-78863287 | MS.gene06523:CDS |
CACCAGTATGAAGCAAGTGA+TGG | 0.581489 | 3.2:+78865770 | None:intergenic |
CATTATAATCATTAGGAAGA+GGG | 0.585288 | 3.2:+78863703 | None:intergenic |
TGGCTGCAGAAAGCGTGAGA+TGG | 0.586100 | 3.2:-78864238 | MS.gene06523:intron |
AAGGCCTATTCCAGGGACCC+TGG | 0.586920 | 3.2:+78863580 | None:intergenic |
ATTCTTACCGGAAATGGCTG+GGG | 0.587473 | 3.2:+78866257 | None:intergenic |
AGAATAGCTAAGATAAGCAC+CGG | 0.592033 | 3.2:+78864215 | None:intergenic |
CAGCCAGGTAGCGTGTCTGT+AGG | 0.592543 | 3.2:-78863143 | MS.gene06523:CDS |
ACAAACACATATTTGAAGAG+TGG | 0.592621 | 3.2:+78866636 | None:intergenic |
AGTATGAGCATTGAGGATGA+TGG | 0.593967 | 3.2:-78863260 | MS.gene06523:CDS |
TTCTTGAGAAGGAATTGTAG+AGG | 0.594347 | 3.2:-78862858 | MS.gene06523:CDS |
TGAATATGACCTTCACAACA+AGG | 0.594779 | 3.2:-78863648 | MS.gene06523:CDS |
GTGGTGTTTCTTGAACATGA+TGG | 0.600895 | 3.2:+78865960 | None:intergenic |
ACGGTGATATGCAGGGAGGT+TGG | 0.607011 | 3.2:+78863505 | None:intergenic |
TCTTATATGAAAACAAAGCA+AGG | 0.609165 | 3.2:-78862924 | MS.gene06523:CDS |
ATATACCTGATGCATTTCCC+AGG | 0.610886 | 3.2:+78863991 | None:intergenic |
AAAAGACAAGGATAAGTGGA+TGG | 0.612497 | 3.2:-78865578 | MS.gene06523:CDS |
AGAGCTGATGATAATGGGGA+AGG | 0.616664 | 3.2:-78866606 | MS.gene06523:intron |
ATGGCAATGAATACCTGGAA+CGG | 0.617377 | 3.2:+78864397 | None:intergenic |
CTCATGTAACCCCTGAAGAG+AGG | 0.618572 | 3.2:-78863445 | MS.gene06523:CDS |
GGAACCTTAAGTGACACGTC+AGG | 0.620717 | 3.2:+78862834 | None:intergenic |
TCCAAGCTTAGGAATTGCCA+GGG | 0.621282 | 3.2:-78863597 | MS.gene06523:CDS |
TGGGAATAGTATGAGCATTG+AGG | 0.624273 | 3.2:-78863267 | MS.gene06523:CDS |
AGGTACCTTGTAGGCCGCGT+AGG | 0.626410 | 3.2:-78863425 | MS.gene06523:CDS |
TAATCATTAGGAAGAGGGCA+AGG | 0.630253 | 3.2:+78863708 | None:intergenic |
TGTTATTGAGATGGAACCGA+TGG | 0.632286 | 3.2:-78863093 | MS.gene06523:CDS |
TGAACACAAGGCCTATTCCA+GGG | 0.632355 | 3.2:+78863573 | None:intergenic |
AGTGGATGGCTGTCTTTGGG+TGG | 0.633140 | 3.2:-78865564 | MS.gene06523:CDS |
ACTTTCTTCATATAAGATGG+AGG | 0.634857 | 3.2:-78866403 | MS.gene06523:CDS |
CTCTCTTCAGGGGTTACATG+AGG | 0.638283 | 3.2:+78863446 | None:intergenic |
GAAAGAGCTTTATATACATG+CGG | 0.639602 | 3.2:+78865627 | None:intergenic |
GGGAGCCAAGCAATCATCAG+TGG | 0.640267 | 3.2:-78864179 | MS.gene06523:CDS |
TCTTAGAGCTGATGATAATG+GGG | 0.641130 | 3.2:-78866610 | MS.gene06523:CDS |
AAGTGCAGGATATACCAGAA+AGG | 0.642926 | 3.2:+78864496 | None:intergenic |
AACCTCCAATAAAGAAACTG+GGG | 0.647207 | 3.2:+78862812 | None:intergenic |
ATGATTGGTATCGAACTCGT+GGG | 0.648080 | 3.2:-78863286 | MS.gene06523:CDS |
CTAGGACACGGTGATATGCA+GGG | 0.648925 | 3.2:+78863498 | None:intergenic |
TAGTGAGATCAGTGAACACA+AGG | 0.650751 | 3.2:+78863561 | None:intergenic |
CAAAGCGGGAGAAATTCGCT+GGG | 0.651381 | 3.2:+78863531 | None:intergenic |
TGAAAGTGAGACAAGGTCTG+AGG | 0.659981 | 3.2:-78863024 | MS.gene06523:CDS |
CTGCGCCCGAAAGACGAGTG+AGG | 0.673470 | 3.2:-78863067 | MS.gene06523:CDS |
AGTGAGACAAGGTCTGAGGT+TGG | 0.674888 | 3.2:-78863020 | MS.gene06523:CDS |
CAGGGAGGTTGGTGACAAAG+CGG | 0.679360 | 3.2:+78863516 | None:intergenic |
TCACTGACAAAGTTCCGCGA+GGG | 0.681855 | 3.2:-78863749 | MS.gene06523:CDS |
ATGATCATGAAAGTGAGACA+AGG | 0.691543 | 3.2:-78863031 | MS.gene06523:CDS |
TTGGTAGCCAAGCACCCTCG+CGG | 0.692674 | 3.2:+78863735 | None:intergenic |
AAATGGATCTTGAACCTGGG+AGG | 0.693417 | 3.2:-78866969 | MS.gene06523:CDS |
ACCTCCAATAAAGAAACTGG+GGG | 0.693955 | 3.2:+78862813 | None:intergenic |
TACAAGGTACCTCTCTTCAG+GGG | 0.697102 | 3.2:+78863436 | None:intergenic |
TCATTAGGAAGAGGGCAAGG+AGG | 0.700116 | 3.2:+78863711 | None:intergenic |
TTCACTGACAAAGTTCCGCG+AGG | 0.701157 | 3.2:-78863750 | MS.gene06523:CDS |
TTTCGAGACACAAAACACCT+GGG | 0.702119 | 3.2:-78864008 | MS.gene06523:CDS |
GAAGTGATTACTTACACTGG+TGG | 0.711878 | 3.2:+78865941 | None:intergenic |
CAACATCTTGATGAACGTCG+CGG | 0.736249 | 3.2:+78863357 | None:intergenic |
GATGAGTAGCAGGTCCTACG+CGG | 0.737138 | 3.2:+78863411 | None:intergenic |
GGACACGGTGATATGCAGGG+AGG | 0.810812 | 3.2:+78863501 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACTAAATTTGATACTTTA+AGG | + | chr3.2:78864935-78864954 | None:intergenic | 15.0% |
!! | GAATATTTATAGATAGATAT+AGG | + | chr3.2:78864328-78864347 | None:intergenic | 15.0% |
!! | GTGAATATATTTCAATTAAA+TGG | - | chr3.2:78863883-78863902 | MS.gene06523:intron | 15.0% |
!! | TACTAAATTTGATACTTTAA+GGG | + | chr3.2:78864934-78864953 | None:intergenic | 15.0% |
!!! | GAAAACATTATACAAAATTT+TGG | - | chr3.2:78865500-78865519 | MS.gene06523:intron | 15.0% |
!! | AAAAAACAATAGGAAACAAA+GGG | + | chr3.2:78865959-78865978 | None:intergenic | 20.0% |
!! | AAATGAGCATTATAATCATT+AGG | + | chr3.2:78866065-78866084 | None:intergenic | 20.0% |
!! | AAGAACTTGAACATATAATA+CGG | + | chr3.2:78864158-78864177 | None:intergenic | 20.0% |
!! | ATATATACTTGAACAAATTC+TGG | - | chr3.2:78864883-78864902 | MS.gene06523:intron | 20.0% |
!! | GCGTATATAATATATTCAAA+TGG | - | chr3.2:78864105-78864124 | MS.gene06523:CDS | 20.0% |
!! | TAATGATTATAATGCTCATT+TGG | - | chr3.2:78866064-78866083 | MS.gene06523:intron | 20.0% |
!! | TGAATATTTGTGAAATGAAA+TGG | - | chr3.2:78862876-78862895 | MS.gene06523:CDS | 20.0% |
!! | TGTAAAACATTGTGAAATAA+GGG | + | chr3.2:78863534-78863553 | None:intergenic | 20.0% |
!! | TTCCTATAAAAAGTGATATA+TGG | + | chr3.2:78865383-78865402 | None:intergenic | 20.0% |
!! | TTGTAAAACATTGTGAAATA+AGG | + | chr3.2:78863535-78863554 | None:intergenic | 20.0% |
!! | TTTGGATTTAAAGAATAAGT+AGG | + | chr3.2:78864296-78864315 | None:intergenic | 20.0% |
!!! | TATAGATAGATATAGGTTTT+GGG | + | chr3.2:78864321-78864340 | None:intergenic | 20.0% |
!!! | TTATAGATAGATATAGGTTT+TGG | + | chr3.2:78864322-78864341 | None:intergenic | 20.0% |
! | AATAAAAACCCACATTAGAA+AGG | + | chr3.2:78862850-78862869 | None:intergenic | 25.0% |
! | ACAATGATTTAATCAAGACA+TGG | - | chr3.2:78864846-78864865 | MS.gene06523:intron | 25.0% |
! | AGGGAAATAATGATAGATAA+AGG | + | chr3.2:78864915-78864934 | None:intergenic | 25.0% |
! | AGTACTATGATTCTTAGAAA+TGG | - | chr3.2:78864485-78864504 | MS.gene06523:CDS | 25.0% |
! | ATGGATATAATTTCTTGAGA+AGG | - | chr3.2:78866889-78866908 | MS.gene06523:intron | 25.0% |
! | ATTAACTAGATAAAACACAG+TGG | - | chr3.2:78865805-78865824 | MS.gene06523:intron | 25.0% |
! | ATTTCACACATACAAAAACT+AGG | + | chr3.2:78866281-78866300 | None:intergenic | 25.0% |
! | CAAAAAACAATAGGAAACAA+AGG | + | chr3.2:78865960-78865979 | None:intergenic | 25.0% |
! | CATACATCAGAAAAAATACA+TGG | - | chr3.2:78865663-78865682 | MS.gene06523:CDS | 25.0% |
! | CATTATAATCATTAGGAAGA+GGG | + | chr3.2:78866058-78866077 | None:intergenic | 25.0% |
! | GGAATATTACTTTGTATAAC+AGG | - | chr3.2:78864215-78864234 | MS.gene06523:CDS | 25.0% |
! | GTAAAACATTGTGAAATAAG+GGG | + | chr3.2:78863533-78863552 | None:intergenic | 25.0% |
! | TAAAACATTGTGAAATAAGG+GGG | + | chr3.2:78863532-78863551 | None:intergenic | 25.0% |
! | TAGTTAATGAACTTCAGTTT+AGG | - | chr3.2:78863578-78863597 | MS.gene06523:CDS | 25.0% |
! | TATAGGTGTATAGTAAGATA+TGG | - | chr3.2:78866375-78866394 | MS.gene06523:CDS | 25.0% |
! | TATTTGTGAAATGAAATGGA+TGG | - | chr3.2:78862880-78862899 | MS.gene06523:CDS | 25.0% |
! | TCTTATATGAAAACAAAGCA+AGG | - | chr3.2:78866834-78866853 | MS.gene06523:intron | 25.0% |
! | TCTTGGTCATTTCAATTATA+TGG | - | chr3.2:78865115-78865134 | MS.gene06523:intron | 25.0% |
! | TTTACATCCCAGAAATTAAT+TGG | - | chr3.2:78865691-78865710 | MS.gene06523:CDS | 25.0% |
!! | AATTTAGAATACTCTTTCTC+TGG | + | chr3.2:78863386-78863405 | None:intergenic | 25.0% |
!! | ATAGATAGATATAGGTTTTG+GGG | + | chr3.2:78864320-78864339 | None:intergenic | 25.0% |
!! | CTGACAATTTGTTTATAAGT+GGG | + | chr3.2:78864563-78864582 | None:intergenic | 25.0% |
!! | CTGATTTTATCCAATATGAT+TGG | - | chr3.2:78866457-78866476 | MS.gene06523:CDS | 25.0% |
!! | TGACAATTTGTTTATAAGTG+GGG | + | chr3.2:78864562-78864581 | None:intergenic | 25.0% |
!!! | AGACAACTTTTTTACTAGTT+CGG | + | chr3.2:78866439-78866458 | None:intergenic | 25.0% |
!!! | CTCTTTATTCATTGATTTGT+AGG | - | chr3.2:78863285-78863304 | MS.gene06523:CDS | 25.0% |
!!! | CTTTGTTTCCTATTGTTTTT+TGG | - | chr3.2:78865958-78865977 | MS.gene06523:CDS | 25.0% |
!!! | TGCCATATATCACTTTTTAT+AGG | - | chr3.2:78865378-78865397 | MS.gene06523:intron | 25.0% |
AATAGATTTGAGCTTTCACA+TGG | - | chr3.2:78864996-78865015 | MS.gene06523:intron | 30.0% | |
ACAAACACATATTTGAAGAG+TGG | + | chr3.2:78863125-78863144 | None:intergenic | 30.0% | |
ACAAGATTTCTTCATTGTTC+TGG | - | chr3.2:78863917-78863936 | MS.gene06523:intron | 30.0% | |
ACTATGATTCTTAGAAATGG+TGG | - | chr3.2:78864488-78864507 | MS.gene06523:CDS | 30.0% | |
ACTTTCTTCATATAAGATGG+AGG | - | chr3.2:78863355-78863374 | MS.gene06523:CDS | 30.0% | |
AGCACTTTCTTCATATAAGA+TGG | - | chr3.2:78863352-78863371 | MS.gene06523:CDS | 30.0% | |
AGTTACAGATTAACTGTGAT+TGG | - | chr3.2:78866543-78866562 | MS.gene06523:intron | 30.0% | |
ATATATGCCAATATAAGTGC+AGG | + | chr3.2:78865279-78865298 | None:intergenic | 30.0% | |
ATATGAGTTCGAACTGTAAT+CGG | - | chr3.2:78863611-78863630 | MS.gene06523:CDS | 30.0% | |
ATCAGAAAAAATACATGGTC+AGG | - | chr3.2:78865668-78865687 | MS.gene06523:CDS | 30.0% | |
ATCTGCAGACAAAAATCAAT+AGG | + | chr3.2:78863958-78863977 | None:intergenic | 30.0% | |
ATGAGCATCCAATTAATTTC+TGG | + | chr3.2:78865702-78865721 | None:intergenic | 30.0% | |
CCACTTATAAACAAATTGTC+AGG | - | chr3.2:78864561-78864580 | MS.gene06523:intron | 30.0% | |
CTATAATATGCTATTGTACC+AGG | + | chr3.2:78865481-78865500 | None:intergenic | 30.0% | |
CTTAACAGATGTTATTGAGA+TGG | - | chr3.2:78866656-78866675 | MS.gene06523:CDS | 30.0% | |
GAGACTAATGAAGAGATTTA+TGG | - | chr3.2:78863062-78863081 | MS.gene06523:CDS | 30.0% | |
GCACTTATATTGGCATATAT+GGG | - | chr3.2:78865279-78865298 | MS.gene06523:intron | 30.0% | |
GCATTATAATCATTAGGAAG+AGG | + | chr3.2:78866059-78866078 | None:intergenic | 30.0% | |
GTGCTTGTAAAAACATACAA+TGG | + | chr3.2:78863017-78863036 | None:intergenic | 30.0% | |
TATGAACAACCTTAACTCTT+GGG | + | chr3.2:78865647-78865666 | None:intergenic | 30.0% | |
TCAAGTTCTTGAAAAAGACA+AGG | - | chr3.2:78864168-78864187 | MS.gene06523:CDS | 30.0% | |
TGAGCATCCAATTAATTTCT+GGG | + | chr3.2:78865701-78865720 | None:intergenic | 30.0% | |
TGCACTTATATTGGCATATA+TGG | - | chr3.2:78865278-78865297 | MS.gene06523:intron | 30.0% | |
TTCTTAGAGCTGATGATAAT+GGG | - | chr3.2:78863147-78863166 | MS.gene06523:CDS | 30.0% | |
TTGAAAAAGACAAGGATAAG+TGG | - | chr3.2:78864176-78864195 | MS.gene06523:CDS | 30.0% | |
TTGGTACTTGTATGGTAATT+GGG | - | chr3.2:78863465-78863484 | MS.gene06523:CDS | 30.0% | |
TTTACTTACTCCGGATTATT+GGG | - | chr3.2:78863652-78863671 | MS.gene06523:CDS | 30.0% | |
TTTCAATTATATGGCCATTC+AGG | - | chr3.2:78865124-78865143 | MS.gene06523:intron | 30.0% | |
! | CCTGACAATTTGTTTATAAG+TGG | + | chr3.2:78864564-78864583 | None:intergenic | 30.0% |
! | GAAAGAGCTTTATATACATG+CGG | + | chr3.2:78864134-78864153 | None:intergenic | 30.0% |
! | GACAATTTGTTTATAAGTGG+GGG | + | chr3.2:78864561-78864580 | None:intergenic | 30.0% |
! | TGATGATTTTCATGTATGTG+TGG | - | chr3.2:78863242-78863261 | MS.gene06523:CDS | 30.0% |
! | TTGATTTTCAGAGAGATTCT+TGG | - | chr3.2:78862928-78862947 | MS.gene06523:CDS | 30.0% |
! | TTTTACTAGTTCGGTTTCAA+AGG | + | chr3.2:78866430-78866449 | None:intergenic | 30.0% |
!! | AGCTCAAATCTATTGATTTG+AGG | + | chr3.2:78864990-78865009 | None:intergenic | 30.0% |
!! | GCTCAAATCTATTGATTTGA+GGG | + | chr3.2:78864989-78865008 | None:intergenic | 30.0% |
!!! | AATCAACAATGTTTTGATGC+AGG | - | chr3.2:78865847-78865866 | MS.gene06523:intron | 30.0% |
!!! | AGTATTTTAACCAACCTGAA+TGG | + | chr3.2:78865141-78865160 | None:intergenic | 30.0% |
!!! | ATCAACAATGTTTTGATGCA+GGG | - | chr3.2:78865848-78865867 | MS.gene06523:intron | 30.0% |
AAAAGACAAGGATAAGTGGA+TGG | - | chr3.2:78864180-78864199 | MS.gene06523:CDS | 35.0% | |
AAACAAAGGGCTAAAATTGG+TGG | + | chr3.2:78865946-78865965 | None:intergenic | 35.0% | |
AACCTCCAATAAAGAAACTG+GGG | + | chr3.2:78866949-78866968 | None:intergenic | 35.0% | |
AAGACATGGAATAAGTTCTC+TGG | - | chr3.2:78864860-78864879 | MS.gene06523:intron | 35.0% | |
AATTATATGGCCATTCAGGT+TGG | - | chr3.2:78865128-78865147 | MS.gene06523:intron | 35.0% | |
ACAACAAGGTTTCACTAGAA+TGG | - | chr3.2:78866124-78866143 | MS.gene06523:intron | 35.0% | |
ACTATGGTACACATAAGGTT+GGG | - | chr3.2:78864030-78864049 | MS.gene06523:CDS | 35.0% | |
AGAATAGCTAAGATAAGCAC+CGG | + | chr3.2:78865546-78865565 | None:intergenic | 35.0% | |
AGGAAACAAAGGGCTAAAAT+TGG | + | chr3.2:78865949-78865968 | None:intergenic | 35.0% | |
ATGATCATGAAAGTGAGACA+AGG | - | chr3.2:78866727-78866746 | MS.gene06523:CDS | 35.0% | |
ATTTGACACTGCTAACATGT+TGG | + | chr3.2:78863860-78863879 | None:intergenic | 35.0% | |
CAACCTCCAATAAAGAAACT+GGG | + | chr3.2:78866950-78866969 | None:intergenic | 35.0% | |
CACATACAAAAACTAGGACA+CGG | + | chr3.2:78866275-78866294 | None:intergenic | 35.0% | |
CGACAGATCCAAAAAACAAT+AGG | + | chr3.2:78865969-78865988 | None:intergenic | 35.0% | |
CTACTATCACCAAAGAAGTT+AGG | + | chr3.2:78865909-78865928 | None:intergenic | 35.0% | |
CTAGAAGTGATTACTTACAC+TGG | + | chr3.2:78863823-78863842 | None:intergenic | 35.0% | |
CTCTGATACCATCTTAGAAA+TGG | - | chr3.2:78864719-78864738 | MS.gene06523:intron | 35.0% | |
CTTGGTACTTGTATGGTAAT+TGG | - | chr3.2:78863464-78863483 | MS.gene06523:CDS | 35.0% | |
CTTTACTTACTCCGGATTAT+TGG | - | chr3.2:78863651-78863670 | MS.gene06523:CDS | 35.0% | |
GAGTTCGATACCAATCATAT+TGG | + | chr3.2:78866470-78866489 | None:intergenic | 35.0% | |
GATATATGGCAATGAATACC+TGG | + | chr3.2:78865369-78865388 | None:intergenic | 35.0% | |
GATTCTTAGAAATGGTGGTT+GGG | - | chr3.2:78864493-78864512 | MS.gene06523:CDS | 35.0% | |
GCATTTCACCTTTCTAATGT+GGG | - | chr3.2:78862839-78862858 | MS.gene06523:CDS | 35.0% | |
GGTATATCCTGCACTTATAT+TGG | - | chr3.2:78865269-78865288 | MS.gene06523:intron | 35.0% | |
GTACTGTTGTAAGAGTAAGA+CGG | - | chr3.2:78864355-78864374 | MS.gene06523:intron | 35.0% | |
GTATGAACAACCTTAACTCT+TGG | + | chr3.2:78865648-78865667 | None:intergenic | 35.0% | |
GTTCTTAGAGCTGATGATAA+TGG | - | chr3.2:78863146-78863165 | MS.gene06523:CDS | 35.0% | |
TAATCCGGAGTAAGTAAAGT+CGG | + | chr3.2:78863650-78863669 | None:intergenic | 35.0% | |
TCAACACTATGGTACACATA+AGG | - | chr3.2:78864025-78864044 | MS.gene06523:CDS | 35.0% | |
TCATCATGAGCAAAAGAAAC+AGG | + | chr3.2:78863228-78863247 | None:intergenic | 35.0% | |
TCTTGAGAAGGAATTGTAGA+GGG | - | chr3.2:78866901-78866920 | MS.gene06523:intron | 35.0% | |
TGAAGCGTGAACATAAATGA+CGG | - | chr3.2:78864643-78864662 | MS.gene06523:CDS | 35.0% | |
TGAATATGACCTTCACAACA+AGG | - | chr3.2:78866110-78866129 | MS.gene06523:intron | 35.0% | |
TGATACCATCTTAGAAATGG+TGG | - | chr3.2:78864722-78864741 | MS.gene06523:intron | 35.0% | |
TGATTCTTAGAAATGGTGGT+TGG | - | chr3.2:78864492-78864511 | MS.gene06523:CDS | 35.0% | |
TGCATTTCACCTTTCTAATG+TGG | - | chr3.2:78862838-78862857 | MS.gene06523:CDS | 35.0% | |
TGGTACTTGTATGGTAATTG+GGG | - | chr3.2:78863466-78863485 | MS.gene06523:CDS | 35.0% | |
TGTTATCAGGTTTCCGTTAT+CGG | + | chr3.2:78864674-78864693 | None:intergenic | 35.0% | |
TGTTATGCTCTTATAGACCT+GGG | - | chr3.2:78865197-78865216 | MS.gene06523:intron | 35.0% | |
TTACTTACTCCGGATTATTG+GGG | - | chr3.2:78863653-78863672 | MS.gene06523:CDS | 35.0% | |
TTAGAATACTCTTTCTCTGG+AGG | + | chr3.2:78863383-78863402 | None:intergenic | 35.0% | |
TTCATCATTCTTGAAGAAGC+TGG | - | chr3.2:78866857-78866876 | MS.gene06523:intron | 35.0% | |
TTCTTGAGAAGGAATTGTAG+AGG | - | chr3.2:78866900-78866919 | MS.gene06523:intron | 35.0% | |
TTGTTATGCTCTTATAGACC+TGG | - | chr3.2:78865196-78865215 | MS.gene06523:intron | 35.0% | |
TTGTTTGCACTTCAACACTA+TGG | - | chr3.2:78864014-78864033 | MS.gene06523:CDS | 35.0% | |
TTTATTTGCAATGCCTTTCC+TGG | - | chr3.2:78865428-78865447 | MS.gene06523:intron | 35.0% | |
! | AGGTTTCTAAAAAGATGCCT+CGG | + | chr3.2:78864455-78864474 | None:intergenic | 35.0% |
! | CTCTTATGGTTGTTATTACC+TGG | - | chr3.2:78865460-78865479 | MS.gene06523:intron | 35.0% |
! | CTTTGGTGATAGTAGTTTGT+TGG | - | chr3.2:78865914-78865933 | MS.gene06523:intron | 35.0% |
! | TCTTAGAGCTGATGATAATG+GGG | - | chr3.2:78863148-78863167 | MS.gene06523:CDS | 35.0% |
! | TGTTAAAAGACATTTTCCCC+AGG | + | chr3.2:78865217-78865236 | None:intergenic | 35.0% |
! | TTTTGTGTCTCGAAATCCAA+TGG | + | chr3.2:78865745-78865764 | None:intergenic | 35.0% |
!! | TCATAGTACTTTTGACTCTG+AGG | + | chr3.2:78864475-78864494 | None:intergenic | 35.0% |
!! | TGATAATGGGGAAGGTAATA+AGG | - | chr3.2:78863160-78863179 | MS.gene06523:CDS | 35.0% |
!!! | AGATATAGGTTTTGGGGTTT+TGG | + | chr3.2:78864314-78864333 | None:intergenic | 35.0% |
!!! | GCACACTTTCTTTTGTTTTC+TGG | - | chr3.2:78863084-78863103 | MS.gene06523:CDS | 35.0% |
AACAACGTGCCTAACTTCTT+TGG | - | chr3.2:78865897-78865916 | MS.gene06523:intron | 40.0% | |
AAGAAGCTGGCACTTAACTA+TGG | - | chr3.2:78866870-78866889 | MS.gene06523:intron | 40.0% | |
AAGTGCAGGATATACCAGAA+AGG | + | chr3.2:78865265-78865284 | None:intergenic | 40.0% | |
ACCAGTATGAAGCAAGTGAT+GGG | + | chr3.2:78863990-78864009 | None:intergenic | 40.0% | |
ACCATCTTAGAAATGGTGGT+TGG | - | chr3.2:78864726-78864745 | MS.gene06523:intron | 40.0% | |
ACCTCCAATAAAGAAACTGG+GGG | + | chr3.2:78866948-78866967 | None:intergenic | 40.0% | |
ACTTGTATGGTAATTGGGGA+TGG | - | chr3.2:78863470-78863489 | MS.gene06523:CDS | 40.0% | |
AGTTCGAACTCATATACTCC+AGG | + | chr3.2:78863606-78863625 | None:intergenic | 40.0% | |
ATAAACCAGAGCCAATCTCT+TGG | - | chr3.2:78865615-78865634 | MS.gene06523:CDS | 40.0% | |
ATAAGTGGATGGCTGTCTTT+GGG | - | chr3.2:78864191-78864210 | MS.gene06523:CDS | 40.0% | |
ATATACCTGATGCATTTCCC+AGG | + | chr3.2:78865770-78865789 | None:intergenic | 40.0% | |
ATGGCAATGAATACCTGGAA+CGG | + | chr3.2:78865364-78865383 | None:intergenic | 40.0% | |
ATGTTCCACTGATGATTGCT+TGG | + | chr3.2:78865587-78865606 | None:intergenic | 40.0% | |
ATTTCGAGACACAAAACACC+TGG | - | chr3.2:78865749-78865768 | MS.gene06523:CDS | 40.0% | |
CACTATGGTACACATAAGGT+TGG | - | chr3.2:78864029-78864048 | MS.gene06523:CDS | 40.0% | |
CATATACAACACCAAGACTC+TGG | + | chr3.2:78862977-78862996 | None:intergenic | 40.0% | |
CATTGTGAAATAAGGGGGAT+AGG | + | chr3.2:78863527-78863546 | None:intergenic | 40.0% | |
CATTGTTAAGAGTCCCACAT+CGG | + | chr3.2:78864832-78864851 | None:intergenic | 40.0% | |
CCAACCTCCAATAAAGAAAC+TGG | + | chr3.2:78866951-78866970 | None:intergenic | 40.0% | |
CCAGTTTCTTTATTGGAGGT+TGG | - | chr3.2:78866948-78866967 | MS.gene06523:CDS | 40.0% | |
CCATCTTAGAAATGGTGGTT+GGG | - | chr3.2:78864727-78864746 | MS.gene06523:intron | 40.0% | |
CTATAAGATCGATGAGTAGC+AGG | + | chr3.2:78866360-78866379 | None:intergenic | 40.0% | |
CTATGTATTGCTGTCACCAT+TGG | - | chr3.2:78865726-78865745 | MS.gene06523:CDS | 40.0% | |
CTGCTACTCATCGATCTTAT+AGG | - | chr3.2:78866358-78866377 | MS.gene06523:CDS | 40.0% | |
CTTCTGATTGTGGTTCTTCT+TGG | - | chr3.2:78863446-78863465 | MS.gene06523:CDS | 40.0% | |
GAAGCGTGAACATAAATGAC+GGG | - | chr3.2:78864644-78864663 | MS.gene06523:CDS | 40.0% | |
GAAGTGATTACTTACACTGG+TGG | + | chr3.2:78863820-78863839 | None:intergenic | 40.0% | |
GATAGGATTCTTACCGGAAA+TGG | + | chr3.2:78863510-78863529 | None:intergenic | 40.0% | |
GCACACAAAGTCAACACATA+AGG | + | chr3.2:78865071-78865090 | None:intergenic | 40.0% | |
GCTGGTATTGCTTTCATTCT+TGG | - | chr3.2:78866807-78866826 | MS.gene06523:CDS | 40.0% | |
GGTTCTTCTTGGTACTTGTA+TGG | - | chr3.2:78863457-78863476 | MS.gene06523:CDS | 40.0% | |
GTGGTGTTTCTTGAACATGA+TGG | + | chr3.2:78863801-78863820 | None:intergenic | 40.0% | |
GTTATCAGGTTTCCGTTATC+GGG | + | chr3.2:78864673-78864692 | None:intergenic | 40.0% | |
GTTATGCTCTTATAGACCTG+GGG | - | chr3.2:78865198-78865217 | MS.gene06523:intron | 40.0% | |
GTTCGAACTCATATACTCCA+GGG | + | chr3.2:78863605-78863624 | None:intergenic | 40.0% | |
TAATCATTAGGAAGAGGGCA+AGG | + | chr3.2:78866053-78866072 | None:intergenic | 40.0% | |
TAGTGAGATCAGTGAACACA+AGG | + | chr3.2:78866200-78866219 | None:intergenic | 40.0% | |
TCTGTTAAGCTTTGCACACT+TGG | + | chr3.2:78866645-78866664 | None:intergenic | 40.0% | |
TGTTATTGAGATGGAACCGA+TGG | - | chr3.2:78866665-78866684 | MS.gene06523:CDS | 40.0% | |
TGTTCCGACTTTACTTACTC+CGG | - | chr3.2:78863643-78863662 | MS.gene06523:CDS | 40.0% | |
TTCTTTATTGGAGGTTGGCA+TGG | - | chr3.2:78866953-78866972 | MS.gene06523:CDS | 40.0% | |
TTGGAAGACTATTCTGCTAC+TGG | - | chr3.2:78862947-78862966 | MS.gene06523:CDS | 40.0% | |
TTTCGAGACACAAAACACCT+GGG | - | chr3.2:78865750-78865769 | MS.gene06523:CDS | 40.0% | |
! | ATGATTGGTATCGAACTCGT+GGG | - | chr3.2:78866472-78866491 | MS.gene06523:CDS | 40.0% |
! | CTAGTGAAACCTTGTTGTGA+AGG | + | chr3.2:78866122-78866141 | None:intergenic | 40.0% |
! | GAAGCTATGTTTGCTGATCT+TGG | - | chr3.2:78865098-78865117 | MS.gene06523:intron | 40.0% |
! | GTAGTTTTCTCAGCAGTATC+TGG | - | chr3.2:78863764-78863783 | MS.gene06523:intron | 40.0% |
! | TATGATTGGTATCGAACTCG+TGG | - | chr3.2:78866471-78866490 | MS.gene06523:CDS | 40.0% |
! | TGGGAATAGTATGAGCATTG+AGG | - | chr3.2:78866491-78866510 | MS.gene06523:intron | 40.0% |
!! | AGAGTTCTGAAAACCAGGAA+AGG | + | chr3.2:78865444-78865463 | None:intergenic | 40.0% |
!! | AGCTATTCTAGCTTCTGTTG+TGG | - | chr3.2:78865557-78865576 | MS.gene06523:CDS | 40.0% |
!! | AGTATGAGCATTGAGGATGA+TGG | - | chr3.2:78866498-78866517 | MS.gene06523:intron | 40.0% |
!! | CAGAGTCTTGGTGTTGTATA+TGG | - | chr3.2:78862975-78862994 | MS.gene06523:CDS | 40.0% |
!! | CCATAAGAGTTCTGAAAACC+AGG | + | chr3.2:78865449-78865468 | None:intergenic | 40.0% |
!! | CCTGGTTTTCAGAACTCTTA+TGG | - | chr3.2:78865446-78865465 | MS.gene06523:intron | 40.0% |
!! | CTAGAATGGCTTCTAGCTTT+AGG | - | chr3.2:78866138-78866157 | MS.gene06523:intron | 40.0% |
!! | CTATTCTAGCTTCTGTTGTG+GGG | - | chr3.2:78865559-78865578 | MS.gene06523:CDS | 40.0% |
!! | GAAGTGTTGGGATAGTTCAA+AGG | - | chr3.2:78862811-78862830 | MS.gene06523:CDS | 40.0% |
!! | GATAACGGAAACCTGATAAC+AGG | - | chr3.2:78864673-78864692 | MS.gene06523:intron | 40.0% |
!! | GCTATTCTAGCTTCTGTTGT+GGG | - | chr3.2:78865558-78865577 | MS.gene06523:CDS | 40.0% |
!! | TATGTGTTGACTTTGTGTGC+AGG | - | chr3.2:78865071-78865090 | MS.gene06523:intron | 40.0% |
!!! | ACGGAATGCTATTTTATCCG+AGG | - | chr3.2:78864435-78864454 | MS.gene06523:CDS | 40.0% |
AAACACCTGGGAAATGCATC+AGG | - | chr3.2:78865762-78865781 | MS.gene06523:CDS | 45.0% | |
AACGGAAACCTGATAACAGG+TGG | - | chr3.2:78864676-78864695 | MS.gene06523:intron | 45.0% | |
AAGGGGGATAGGATTCTTAC+CGG | + | chr3.2:78863516-78863535 | None:intergenic | 45.0% | |
AGAGCCTCTTCACGATTCTT+TGG | + | chr3.2:78864703-78864722 | None:intergenic | 45.0% | |
AGCAAACCTCACTCGTCTTT+CGG | + | chr3.2:78866700-78866719 | None:intergenic | 45.0% | |
AGTAGCCATGTCAGCACAAT+TGG | + | chr3.2:78864068-78864087 | None:intergenic | 45.0% | |
ATGTGTAATCCTGAGCGTGA+GGG | + | chr3.2:78864622-78864641 | None:intergenic | 45.0% | |
ATTAACCCTCCGAATTCCCA+GGG | + | chr3.2:78863688-78863707 | None:intergenic | 45.0% | |
ATTCTTACCGGAAATGGCTG+GGG | + | chr3.2:78863504-78863523 | None:intergenic | 45.0% | |
CAACATCTTGATGAACGTCG+CGG | + | chr3.2:78866404-78866423 | None:intergenic | 45.0% | |
CACCAGTATGAAGCAAGTGA+TGG | + | chr3.2:78863991-78864010 | None:intergenic | 45.0% | |
CTAACACAACCCCACAAAAC+CGG | - | chr3.2:78864517-78864536 | MS.gene06523:intron | 45.0% | |
CTACTGTGCATTAGCACACT+TGG | - | chr3.2:78864083-78864102 | MS.gene06523:CDS | 45.0% | |
GAGCCTCTTCACGATTCTTT+GGG | + | chr3.2:78864702-78864721 | None:intergenic | 45.0% | |
GATAAGTGGATGGCTGTCTT+TGG | - | chr3.2:78864190-78864209 | MS.gene06523:CDS | 45.0% | |
GATTCTTACCGGAAATGGCT+GGG | + | chr3.2:78863505-78863524 | None:intergenic | 45.0% | |
GCACGTTGTTACCAACATCA+CGG | + | chr3.2:78865887-78865906 | None:intergenic | 45.0% | |
GCAGATTGCATTCACCTTTC+TGG | - | chr3.2:78865248-78865267 | MS.gene06523:intron | 45.0% | |
GCATACTGCTCTTCTGATTG+TGG | - | chr3.2:78863436-78863455 | MS.gene06523:CDS | 45.0% | |
GGTTCCCCCAGTTTCTTTAT+TGG | - | chr3.2:78866941-78866960 | MS.gene06523:intron | 45.0% | |
GTGTGTTAAGAGTCCCACAT+CGG | + | chr3.2:78864598-78864617 | None:intergenic | 45.0% | |
GTGTTCACTGATCTCACTAC+CGG | - | chr3.2:78866201-78866220 | MS.gene06523:intron | 45.0% | |
TATTAACCCTCCGAATTCCC+AGG | + | chr3.2:78863689-78863708 | None:intergenic | 45.0% | |
TCATCAGCATGCTGTCTGTT+TGG | + | chr3.2:78863332-78863351 | None:intergenic | 45.0% | |
TCATGTATGTGTGGCTATGC+AGG | - | chr3.2:78863251-78863270 | MS.gene06523:CDS | 45.0% | |
TCCAAGCTTAGGAATTGCCA+GGG | - | chr3.2:78866161-78866180 | MS.gene06523:intron | 45.0% | |
TCCCATCACTTGCTTCATAC+TGG | - | chr3.2:78863986-78864005 | MS.gene06523:intron | 45.0% | |
TCCCCCAGTTTCTTTATTGG+AGG | - | chr3.2:78866944-78866963 | MS.gene06523:intron | 45.0% | |
TGAAAGTGAGACAAGGTCTG+AGG | - | chr3.2:78866734-78866753 | MS.gene06523:CDS | 45.0% | |
TGAACACAAGGCCTATTCCA+GGG | + | chr3.2:78866188-78866207 | None:intergenic | 45.0% | |
TGAACTTCAGTTTAGGTCCC+TGG | - | chr3.2:78863585-78863604 | MS.gene06523:CDS | 45.0% | |
TTGGGAAACAGCCAAGAGAT+TGG | + | chr3.2:78865629-78865648 | None:intergenic | 45.0% | |
! | CCCAACCACCATTTCTAAGA+TGG | + | chr3.2:78864496-78864515 | None:intergenic | 45.0% |
! | CTACAAGGTACCTCTCTTCA+GGG | + | chr3.2:78866326-78866345 | None:intergenic | 45.0% |
! | GCTGACTCTCATATCCTTGT+TGG | + | chr3.2:78866587-78866606 | None:intergenic | 45.0% |
! | TACAAGGTACCTCTCTTCAG+GGG | + | chr3.2:78866325-78866344 | None:intergenic | 45.0% |
! | TGGCTGTTTCCCAAGAGTTA+AGG | - | chr3.2:78865635-78865654 | MS.gene06523:CDS | 45.0% |
! | TTAAGAGTCCCACATCGGTT+AGG | + | chr3.2:78864593-78864612 | None:intergenic | 45.0% |
! | TTGCTCCAATTGTGCTGACA+TGG | - | chr3.2:78864060-78864079 | MS.gene06523:CDS | 45.0% |
!! | AGAGCTGATGATAATGGGGA+AGG | - | chr3.2:78863152-78863171 | MS.gene06523:CDS | 45.0% |
!! | CTAGCTTTAGGTCCAAGCTT+AGG | - | chr3.2:78866150-78866169 | MS.gene06523:intron | 45.0% |
!!! | ACTAGCTTTTGCAGCCAACA+AGG | - | chr3.2:78866570-78866589 | MS.gene06523:intron | 45.0% |
AATCCTACAGACACGCTACC+TGG | + | chr3.2:78866621-78866640 | None:intergenic | 50.0% | |
ACAAAGCGGGAGAAATTCGC+TGG | + | chr3.2:78866231-78866250 | None:intergenic | 50.0% | |
ACCCTGGCAATTCCTAAGCT+TGG | + | chr3.2:78866165-78866184 | None:intergenic | 50.0% | |
ACTAGGACACGGTGATATGC+AGG | + | chr3.2:78866264-78866283 | None:intergenic | 50.0% | |
AGCAGTGATGACCGTGATGT+TGG | - | chr3.2:78865873-78865892 | MS.gene06523:intron | 50.0% | |
AGCTACTATGTCTCCGTTCC+AGG | - | chr3.2:78865348-78865367 | MS.gene06523:intron | 50.0% | |
CAAAGCGGGAGAAATTCGCT+GGG | + | chr3.2:78866230-78866249 | None:intergenic | 50.0% | |
CTAGGACACGGTGATATGCA+GGG | + | chr3.2:78866263-78866282 | None:intergenic | 50.0% | |
CTCATGTAACCCCTGAAGAG+AGG | - | chr3.2:78866313-78866332 | MS.gene06523:CDS | 50.0% | |
CTCTCTTCAGGGGTTACATG+AGG | + | chr3.2:78866315-78866334 | None:intergenic | 50.0% | |
CTTACTCCGGATTATTGGGG+CGG | - | chr3.2:78863656-78863675 | MS.gene06523:CDS | 50.0% | |
GATGTGTAATCCTGAGCGTG+AGG | + | chr3.2:78864623-78864642 | None:intergenic | 50.0% | |
GCAAACCTCACTCGTCTTTC+GGG | + | chr3.2:78866699-78866718 | None:intergenic | 50.0% | |
GGAACCTTAAGTGACACGTC+AGG | + | chr3.2:78866927-78866946 | None:intergenic | 50.0% | |
GGATTCTTACCGGAAATGGC+TGG | + | chr3.2:78863506-78863525 | None:intergenic | 50.0% | |
GTCCAAGCTTAGGAATTGCC+AGG | - | chr3.2:78866160-78866179 | MS.gene06523:intron | 50.0% | |
GTGAACACAAGGCCTATTCC+AGG | + | chr3.2:78866189-78866208 | None:intergenic | 50.0% | |
TCACTGACAAAGTTCCGCGA+GGG | - | chr3.2:78866009-78866028 | MS.gene06523:intron | 50.0% | |
TCAGGGGTTACATGAGGAAC+AGG | + | chr3.2:78866309-78866328 | None:intergenic | 50.0% | |
TCATTAGGAAGAGGGCAAGG+AGG | + | chr3.2:78866050-78866069 | None:intergenic | 50.0% | |
TCTTTGGGCCACCTGTTATC+AGG | + | chr3.2:78864687-78864706 | None:intergenic | 50.0% | |
TGGCCCAAAGAATCGTGAAG+AGG | - | chr3.2:78864696-78864715 | MS.gene06523:intron | 50.0% | |
TGTATGTGTGGCTATGCAGG+TGG | - | chr3.2:78863254-78863273 | MS.gene06523:CDS | 50.0% | |
TGTGTAATCCTGAGCGTGAG+GGG | + | chr3.2:78864621-78864640 | None:intergenic | 50.0% | |
TTAACCCTCCGAATTCCCAG+GGG | + | chr3.2:78863687-78863706 | None:intergenic | 50.0% | |
TTCACTGACAAAGTTCCGCG+AGG | - | chr3.2:78866008-78866027 | MS.gene06523:intron | 50.0% | |
! | AACAGCCAAGAGATTGGCTC+TGG | + | chr3.2:78865623-78865642 | None:intergenic | 50.0% |
! | AGTGAGACAAGGTCTGAGGT+TGG | - | chr3.2:78866738-78866757 | MS.gene06523:CDS | 50.0% |
! | CCTACAAGGTACCTCTCTTC+AGG | + | chr3.2:78866327-78866346 | None:intergenic | 50.0% |
! | GCGTGAACATAAATGACGGG+TGG | - | chr3.2:78864647-78864666 | MS.gene06523:CDS | 50.0% |
! | TTGAACCTGGGAGGAAGTGT+TGG | - | chr3.2:78862798-78862817 | MS.gene06523:CDS | 50.0% |
!! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr3.2:78864530-78864549 | None:intergenic | 50.0% |
!! | CCTGAAGAGAGGTACCTTGT+AGG | - | chr3.2:78866324-78866343 | MS.gene06523:CDS | 50.0% |
!! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr3.2:78864519-78864538 | None:intergenic | 50.0% |
!! | CTACTGGCTTACCAGAGTCT+TGG | - | chr3.2:78862963-78862982 | MS.gene06523:CDS | 50.0% |
!! | CTCAGCAGTATCTGGTCTTG+AGG | - | chr3.2:78863772-78863791 | MS.gene06523:intron | 50.0% |
!! | TGAACCTGGGAGGAAGTGTT+GGG | - | chr3.2:78862799-78862818 | MS.gene06523:CDS | 50.0% |
!! | TGAGGTTGGTGTGCAAATGC+AGG | - | chr3.2:78866752-78866771 | MS.gene06523:CDS | 50.0% |
ACGGTGATATGCAGGGAGGT+TGG | + | chr3.2:78866256-78866275 | None:intergenic | 55.0% | |
AGGAAGAGGGCAAGGAGGAT+TGG | + | chr3.2:78866045-78866064 | None:intergenic | 55.0% | |
AGGCCAACTCCTAACCGATG+TGG | - | chr3.2:78864581-78864600 | MS.gene06523:intron | 55.0% | |
AGTCAGCAAAGTGTGCAGCC+AGG | - | chr3.2:78866600-78866619 | MS.gene06523:intron | 55.0% | |
AGTGGATGGCTGTCTTTGGG+TGG | - | chr3.2:78864194-78864213 | MS.gene06523:CDS | 55.0% | |
ATTGCCAGGGTCCCTGGAAT+AGG | - | chr3.2:78866174-78866193 | MS.gene06523:intron | 55.0% | |
CTATCCCAACACTTCCTCCC+AGG | + | chr3.2:78862806-78862825 | None:intergenic | 55.0% | |
GATGAGTAGCAGGTCCTACG+CGG | + | chr3.2:78866350-78866369 | None:intergenic | 55.0% | |
GCAATCCTCACCTCACAAGC+CGG | + | chr3.2:78864539-78864558 | None:intergenic | 55.0% | |
GGAGAAATTCGCTGGGATGC+CGG | + | chr3.2:78866223-78866242 | None:intergenic | 55.0% | |
GGCCAACTCCTAACCGATGT+GGG | - | chr3.2:78864582-78864601 | MS.gene06523:intron | 55.0% | |
GGGAGCCAAGCAATCATCAG+TGG | - | chr3.2:78865579-78865598 | MS.gene06523:CDS | 55.0% | |
GTGCTTACCCCAGCCATTTC+CGG | - | chr3.2:78863494-78863513 | MS.gene06523:CDS | 55.0% | |
GTGTAATCCTGAGCGTGAGG+GGG | + | chr3.2:78864620-78864639 | None:intergenic | 55.0% | |
TTAGGAATTGCCAGGGTCCC+TGG | - | chr3.2:78866168-78866187 | MS.gene06523:intron | 55.0% | |
! | GTCCCACATCGGTTAGGAGT+TGG | + | chr3.2:78864587-78864606 | None:intergenic | 55.0% |
! | TGCAGAAAGCGTGAGATGGC+CGG | - | chr3.2:78865524-78865543 | MS.gene06523:intron | 55.0% |
! | TGGCTGCAGAAAGCGTGAGA+TGG | - | chr3.2:78865520-78865539 | MS.gene06523:intron | 55.0% |
!! | AATGACGGGTGGCCCGATAA+CGG | - | chr3.2:78864658-78864677 | MS.gene06523:CDS | 55.0% |
!! | AGGGAGGTTGGTGACAAAGC+GGG | + | chr3.2:78866244-78866263 | None:intergenic | 55.0% |
!! | AGGGCCTGACGTGTCACTTA+AGG | - | chr3.2:78866920-78866939 | MS.gene06523:intron | 55.0% |
!! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr3.2:78864531-78864550 | MS.gene06523:intron | 55.0% |
!! | CACCTCACAAGCCGGTTTTG+TGG | + | chr3.2:78864531-78864550 | None:intergenic | 55.0% |
!! | CAGGGAGGTTGGTGACAAAG+CGG | + | chr3.2:78866245-78866264 | None:intergenic | 55.0% |
!! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr3.2:78864529-78864548 | None:intergenic | 55.0% |
AAGGCCTATTCCAGGGACCC+TGG | + | chr3.2:78866181-78866200 | None:intergenic | 60.0% | |
AGGTACCTTGTAGGCCGCGT+AGG | - | chr3.2:78866333-78866352 | MS.gene06523:CDS | 60.0% | |
CAGCCAGGTAGCGTGTCTGT+AGG | - | chr3.2:78866615-78866634 | MS.gene06523:CDS | 60.0% | |
CCTCCGAATTCCCAGGGGAA+GGG | + | chr3.2:78863682-78863701 | None:intergenic | 60.0% | |
CCTTCCCCTGGGAATTCGGA+GGG | - | chr3.2:78863680-78863699 | MS.gene06523:CDS | 60.0% | |
CTTTCGGGCGCAGCATCCAT+CGG | + | chr3.2:78866684-78866703 | None:intergenic | 60.0% | |
GAAGGGCCGCCCCAATAATC+CGG | + | chr3.2:78863665-78863684 | None:intergenic | 60.0% | |
GGACACGGTGATATGCAGGG+AGG | + | chr3.2:78866260-78866279 | None:intergenic | 60.0% | |
TAACACACCCCCTCACGCTC+AGG | - | chr3.2:78864610-78864629 | MS.gene06523:intron | 60.0% | |
! | TTGGTAGCCAAGCACCCTCG+CGG | + | chr3.2:78866026-78866045 | None:intergenic | 60.0% |
!! | CAAAGTTCCGCGAGGGTGCT+TGG | - | chr3.2:78866016-78866035 | MS.gene06523:intron | 60.0% |
!! | CCCCACAAAACCGGCTTGTG+AGG | - | chr3.2:78864526-78864545 | MS.gene06523:intron | 60.0% |
CAGGTCCTACGCGGCCTACA+AGG | + | chr3.2:78866341-78866360 | None:intergenic | 65.0% | |
CCCTCCGAATTCCCAGGGGA+AGG | + | chr3.2:78863683-78863702 | None:intergenic | 65.0% | |
CCCTTCCCCTGGGAATTCGG+AGG | - | chr3.2:78863679-78863698 | MS.gene06523:CDS | 65.0% | |
CGGCCCTTCCCCTGGGAATT+CGG | - | chr3.2:78863676-78863695 | MS.gene06523:CDS | 65.0% | |
CTGCGCCCGAAAGACGAGTG+AGG | - | chr3.2:78866691-78866710 | MS.gene06523:CDS | 65.0% | |
ATTGGGGCGGCCCTTCCCCT+GGG | - | chr3.2:78863669-78863688 | MS.gene06523:CDS | 70.0% | |
TATTGGGGCGGCCCTTCCCC+TGG | - | chr3.2:78863668-78863687 | MS.gene06523:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 78862791 | 78866989 | 78862791 | ID=MS.gene06523 |
chr3.2 | mRNA | 78862791 | 78866989 | 78862791 | ID=MS.gene06523.t1;Parent=MS.gene06523 |
chr3.2 | exon | 78866948 | 78866989 | 78866948 | ID=MS.gene06523.t1.exon1;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78866948 | 78866989 | 78866948 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78866607 | 78866841 | 78866607 | ID=MS.gene06523.t1.exon2;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78866607 | 78866841 | 78866607 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78866265 | 78866507 | 78866265 | ID=MS.gene06523.t1.exon3;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78866265 | 78866507 | 78866265 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78865956 | 78866012 | 78865956 | ID=MS.gene06523.t1.exon4;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78865956 | 78866012 | 78865956 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78865544 | 78865804 | 78865544 | ID=MS.gene06523.t1.exon5;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78865544 | 78865804 | 78865544 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78864635 | 78864687 | 78864635 | ID=MS.gene06523.t1.exon6;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78864635 | 78864687 | 78864635 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78864411 | 78864528 | 78864411 | ID=MS.gene06523.t1.exon7;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78864411 | 78864528 | 78864411 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78863997 | 78864251 | 78863997 | ID=MS.gene06523.t1.exon8;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78863997 | 78864251 | 78863997 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
chr3.2 | exon | 78862791 | 78863773 | 78862791 | ID=MS.gene06523.t1.exon9;Parent=MS.gene06523.t1 |
chr3.2 | CDS | 78862791 | 78863773 | 78862791 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
Gene Sequence |
Protein sequence |