Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06523.t1 | XP_013461519.1 | 93.5 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.00E+00 | 1455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06523.t1 | O22881 | 72.5 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0e+00 | 1124.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06523.t1 | A0A072V0K3 | 93.5 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.0e+00 | 1455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049395 | MS.gene06523 | 0.845826 | 3.19E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50194 | MS.gene06523 | PPI |
| MS.gene016996 | MS.gene06523 | PPI |
| MS.gene54170 | MS.gene06523 | PPI |
| MS.gene038119 | MS.gene06523 | PPI |
| MS.gene06523 | MS.gene47702 | PPI |
| MS.gene06523 | MS.gene57004 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06523.t1 | MTR_3g094090 | 93.451 | 794 | 6 | 1 | 1 | 748 | 1 | 794 | 0.0 | 1513 |
| MS.gene06523.t1 | MTR_3g094090 | 92.118 | 609 | 2 | 1 | 186 | 748 | 1 | 609 | 0.0 | 1144 |
| MS.gene06523.t1 | MTR_6g007697 | 59.137 | 788 | 241 | 9 | 14 | 746 | 13 | 774 | 0.0 | 937 |
| MS.gene06523.t1 | MTR_5g034500 | 55.569 | 808 | 273 | 11 | 1 | 748 | 1 | 782 | 0.0 | 883 |
| MS.gene06523.t1 | MTR_6g033165 | 50.993 | 806 | 301 | 11 | 6 | 748 | 45 | 819 | 0.0 | 784 |
| MS.gene06523.t1 | MTR_5g071860 | 49.424 | 781 | 301 | 11 | 14 | 746 | 18 | 752 | 0.0 | 755 |
| MS.gene06523.t1 | MTR_5g071630 | 46.173 | 797 | 302 | 16 | 3 | 746 | 1 | 723 | 0.0 | 683 |
| MS.gene06523.t1 | MTR_8g099090 | 44.289 | 788 | 368 | 10 | 14 | 746 | 19 | 790 | 0.0 | 671 |
| MS.gene06523.t1 | MTR_5g071827 | 48.028 | 710 | 275 | 11 | 85 | 746 | 1 | 664 | 0.0 | 664 |
| MS.gene06523.t1 | MTR_2g438150 | 43.734 | 798 | 363 | 9 | 1 | 748 | 28 | 789 | 0.0 | 645 |
| MS.gene06523.t1 | MTR_2g438150 | 43.609 | 798 | 364 | 9 | 1 | 748 | 28 | 789 | 0.0 | 642 |
| MS.gene06523.t1 | MTR_4g094660 | 43.500 | 800 | 360 | 13 | 1 | 748 | 28 | 787 | 0.0 | 622 |
| MS.gene06523.t1 | MTR_4g099260 | 41.625 | 800 | 385 | 11 | 1 | 746 | 42 | 813 | 0.0 | 613 |
| MS.gene06523.t1 | MTR_8g107510 | 40.996 | 783 | 397 | 9 | 13 | 745 | 12 | 779 | 0.0 | 608 |
| MS.gene06523.t1 | MTR_8g063840 | 42.125 | 781 | 373 | 11 | 18 | 748 | 89 | 840 | 0.0 | 587 |
| MS.gene06523.t1 | MTR_8g022130 | 40.409 | 782 | 353 | 11 | 11 | 746 | 50 | 764 | 0.0 | 574 |
| MS.gene06523.t1 | MTR_7g108480 | 39.336 | 783 | 357 | 9 | 13 | 746 | 58 | 771 | 0.0 | 568 |
| MS.gene06523.t1 | MTR_2g008820 | 39.309 | 781 | 388 | 13 | 22 | 748 | 101 | 849 | 0.0 | 556 |
| MS.gene06523.t1 | MTR_2g438160 | 48.500 | 600 | 251 | 7 | 1 | 550 | 28 | 619 | 0.0 | 545 |
| MS.gene06523.t1 | MTR_8g088200 | 39.675 | 799 | 398 | 10 | 1 | 746 | 13 | 780 | 0.0 | 540 |
| MS.gene06523.t1 | MTR_8g063900 | 43.622 | 635 | 297 | 7 | 12 | 593 | 53 | 679 | 5.33e-180 | 533 |
| MS.gene06523.t1 | MTR_5g070670 | 38.570 | 783 | 391 | 14 | 22 | 748 | 101 | 849 | 1.23e-168 | 507 |
| MS.gene06523.t1 | MTR_4g094660 | 41.693 | 638 | 285 | 10 | 161 | 748 | 1 | 601 | 7.74e-158 | 471 |
| MS.gene06523.t1 | MTR_5g034590 | 63.566 | 129 | 47 | 0 | 421 | 549 | 132 | 260 | 2.06e-53 | 189 |
| MS.gene06523.t1 | MTR_5g034590 | 34.574 | 188 | 92 | 6 | 84 | 240 | 5 | 192 | 1.80e-17 | 85.5 |
| MS.gene06523.t1 | MTR_8g022160 | 52.632 | 171 | 76 | 2 | 11 | 181 | 50 | 215 | 2.05e-51 | 180 |
| MS.gene06523.t1 | MTR_1g029310 | 35.938 | 128 | 73 | 3 | 171 | 298 | 12 | 130 | 1.83e-16 | 77.0 |
| MS.gene06523.t1 | MTR_6g045057 | 37.342 | 158 | 91 | 5 | 176 | 331 | 8 | 159 | 6.53e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
| MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
| MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
| MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
| MS.gene06523.t1 | AT2G40540 | 72.547 | 805 | 153 | 10 | 1 | 748 | 1 | 794 | 0.0 | 1162 |
| MS.gene06523.t1 | AT5G14880 | 59.241 | 790 | 246 | 13 | 14 | 748 | 13 | 781 | 0.0 | 900 |
| MS.gene06523.t1 | AT1G70300 | 57.143 | 805 | 265 | 11 | 1 | 748 | 1 | 782 | 0.0 | 892 |
| MS.gene06523.t1 | AT3G02050 | 51.403 | 784 | 317 | 9 | 17 | 748 | 18 | 789 | 0.0 | 741 |
| MS.gene06523.t1 | AT4G23640 | 46.752 | 785 | 355 | 7 | 12 | 746 | 2 | 773 | 0.0 | 692 |
| MS.gene06523.t1 | AT2G30070 | 54.516 | 609 | 227 | 5 | 14 | 575 | 18 | 623 | 0.0 | 683 |
| MS.gene06523.t1 | AT2G30070 | 61.111 | 72 | 28 | 0 | 677 | 748 | 641 | 712 | 1.04e-18 | 91.3 |
| MS.gene06523.t1 | AT1G31120 | 43.860 | 798 | 362 | 11 | 1 | 748 | 35 | 796 | 0.0 | 615 |
| MS.gene06523.t1 | AT4G19960 | 44.560 | 772 | 353 | 9 | 26 | 748 | 62 | 807 | 0.0 | 613 |
| MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
| MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
| MS.gene06523.t1 | AT2G35060 | 44.236 | 798 | 354 | 13 | 1 | 748 | 36 | 792 | 0.0 | 609 |
| MS.gene06523.t1 | AT2G35060 | 44.180 | 799 | 354 | 14 | 1 | 748 | 36 | 793 | 0.0 | 605 |
| MS.gene06523.t1 | AT1G60160 | 42.516 | 795 | 349 | 15 | 14 | 748 | 81 | 827 | 0.0 | 603 |
| MS.gene06523.t1 | AT4G19960 | 43.108 | 798 | 353 | 10 | 26 | 748 | 62 | 833 | 0.0 | 600 |
| MS.gene06523.t1 | AT4G19960 | 43.401 | 788 | 355 | 11 | 26 | 748 | 62 | 823 | 0.0 | 597 |
| MS.gene06523.t1 | AT4G13420 | 39.649 | 797 | 377 | 10 | 3 | 746 | 38 | 783 | 0.0 | 594 |
| MS.gene06523.t1 | AT2G30070 | 52.277 | 505 | 191 | 5 | 118 | 575 | 2 | 503 | 0.0 | 540 |
| MS.gene06523.t1 | AT2G30070 | 61.111 | 72 | 28 | 0 | 677 | 748 | 521 | 592 | 6.78e-19 | 91.7 |
| MS.gene06523.t1 | AT4G33530 | 39.203 | 778 | 394 | 12 | 22 | 748 | 106 | 855 | 4.51e-180 | 537 |
| MS.gene06523.t1 | AT5G09400 | 38.951 | 801 | 395 | 14 | 2 | 748 | 98 | 858 | 1.57e-176 | 528 |
| MS.gene06523.t1 | AT4G19960 | 42.359 | 602 | 278 | 6 | 195 | 748 | 6 | 586 | 4.11e-157 | 468 |
| MS.gene06523.t1 | AT4G33530 | 36.250 | 640 | 333 | 9 | 158 | 748 | 14 | 627 | 1.76e-141 | 429 |
Find 175 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTGCATTCACCTTTC+TGG | 0.122911 | 3.2:-78864510 | MS.gene06523:intron |
| TGCACTTATATTGGCATATA+TGG | 0.141485 | 3.2:-78864480 | MS.gene06523:CDS |
| CTTGGTACTTGTATGGTAAT+TGG | 0.184251 | 3.2:-78866294 | MS.gene06523:CDS |
| GAGACTAATGAAGAGATTTA+TGG | 0.198641 | 3.2:-78866696 | MS.gene06523:CDS |
| TTTACATCCCAGAAATTAAT+TGG | 0.199713 | 3.2:-78864067 | MS.gene06523:CDS |
| TCTTGGTCATTTCAATTATA+TGG | 0.206069 | 3.2:-78864643 | MS.gene06523:CDS |
| GCTGGTATTGCTTTCATTCT+TGG | 0.223882 | 3.2:-78862951 | MS.gene06523:CDS |
| TTGGTACTTGTATGGTAATT+GGG | 0.231362 | 3.2:-78866293 | MS.gene06523:CDS |
| CTAGAATGGCTTCTAGCTTT+AGG | 0.240333 | 3.2:-78863620 | MS.gene06523:CDS |
| TTTCAATTATATGGCCATTC+AGG | 0.245101 | 3.2:-78864634 | MS.gene06523:intron |
| CTCTTTATTCATTGATTTGT+AGG | 0.245636 | 3.2:-78866473 | MS.gene06523:CDS |
| GCAAACCTCACTCGTCTTTC+GGG | 0.247609 | 3.2:+78863062 | None:intergenic |
| CAGAGTCTTGGTGTTGTATA+TGG | 0.249792 | 3.2:-78866783 | MS.gene06523:CDS |
| CTTCTGATTGTGGTTCTTCT+TGG | 0.250106 | 3.2:-78866312 | MS.gene06523:CDS |
| GGTATATCCTGCACTTATAT+TGG | 0.277914 | 3.2:-78864489 | MS.gene06523:CDS |
| GTGCTTACCCCAGCCATTTC+CGG | 0.289029 | 3.2:-78866264 | MS.gene06523:intron |
| GCTGACTCTCATATCCTTGT+TGG | 0.294680 | 3.2:+78863174 | None:intergenic |
| CTGCTACTCATCGATCTTAT+AGG | 0.300540 | 3.2:-78863400 | MS.gene06523:CDS |
| AGCTACTATGTCTCCGTTCC+AGG | 0.305722 | 3.2:-78864410 | MS.gene06523:intron |
| CCAACCTCCAATAAAGAAAC+TGG | 0.307237 | 3.2:+78862810 | None:intergenic |
| ATGAGCATCCAATTAATTTC+TGG | 0.307961 | 3.2:+78864059 | None:intergenic |
| AGCAAACCTCACTCGTCTTT+CGG | 0.311992 | 3.2:+78863061 | None:intergenic |
| TTCTTAGAGCTGATGATAAT+GGG | 0.314821 | 3.2:-78866611 | MS.gene06523:CDS |
| CCTACAAGGTACCTCTCTTC+AGG | 0.321296 | 3.2:+78863434 | None:intergenic |
| GGAATATTACTTTGTATAAC+AGG | 0.322568 | 3.2:-78865543 | MS.gene06523:intron |
| GAAGCTATGTTTGCTGATCT+TGG | 0.331982 | 3.2:-78864660 | MS.gene06523:CDS |
| TAATGATTATAATGCTCATT+TGG | 0.343435 | 3.2:-78863694 | MS.gene06523:CDS |
| GCTATTCTAGCTTCTGTTGT+GGG | 0.351333 | 3.2:-78864200 | MS.gene06523:CDS |
| TCCCATCACTTGCTTCATAC+TGG | 0.360782 | 3.2:-78865772 | MS.gene06523:CDS |
| AGTAGCCATGTCAGCACAAT+TGG | 0.368461 | 3.2:+78865693 | None:intergenic |
| GTTCTTAGAGCTGATGATAA+TGG | 0.369896 | 3.2:-78866612 | MS.gene06523:CDS |
| GATAAGTGGATGGCTGTCTT+TGG | 0.370262 | 3.2:-78865568 | MS.gene06523:CDS |
| AAGAAGCTGGCACTTAACTA+TGG | 0.372161 | 3.2:-78862888 | MS.gene06523:CDS |
| GGTTCTTCTTGGTACTTGTA+TGG | 0.373021 | 3.2:-78866301 | MS.gene06523:CDS |
| AGTTACAGATTAACTGTGAT+TGG | 0.377036 | 3.2:-78863215 | MS.gene06523:CDS |
| AATTTAGAATACTCTTTCTC+TGG | 0.377126 | 3.2:+78866375 | None:intergenic |
| TGGCTGTTTCCCAAGAGTTA+AGG | 0.392383 | 3.2:-78864123 | MS.gene06523:CDS |
| TCATCAGCATGCTGTCTGTT+TGG | 0.393866 | 3.2:+78866429 | None:intergenic |
| TATAGGTGTATAGTAAGATA+TGG | 0.400337 | 3.2:-78863383 | MS.gene06523:CDS |
| TGAGCATCCAATTAATTTCT+GGG | 0.403364 | 3.2:+78864060 | None:intergenic |
| TCTGTTAAGCTTTGCACACT+TGG | 0.403454 | 3.2:+78863116 | None:intergenic |
| GAGTTCGATACCAATCATAT+TGG | 0.413900 | 3.2:+78863291 | None:intergenic |
| TTGTTTGCACTTCAACACTA+TGG | 0.414430 | 3.2:-78865744 | MS.gene06523:CDS |
| ATTGCCAGGGTCCCTGGAAT+AGG | 0.415229 | 3.2:-78863584 | MS.gene06523:CDS |
| ACAACAAGGTTTCACTAGAA+TGG | 0.419139 | 3.2:-78863634 | MS.gene06523:CDS |
| TTGGAAGACTATTCTGCTAC+TGG | 0.426942 | 3.2:-78866811 | MS.gene06523:CDS |
| TTCTTTATTGGAGGTTGGCA+TGG | 0.427269 | 3.2:-78862805 | MS.gene06523:CDS |
| GATAGGATTCTTACCGGAAA+TGG | 0.427379 | 3.2:+78866251 | None:intergenic |
| CCAGTTTCTTTATTGGAGGT+TGG | 0.427965 | 3.2:-78862810 | MS.gene06523:CDS |
| GTATGAACAACCTTAACTCT+TGG | 0.428073 | 3.2:+78864113 | None:intergenic |
| AGCACTTTCTTCATATAAGA+TGG | 0.430100 | 3.2:-78866406 | MS.gene06523:CDS |
| CTATGTATTGCTGTCACCAT+TGG | 0.435178 | 3.2:-78864032 | MS.gene06523:CDS |
| ATAAGTGGATGGCTGTCTTT+GGG | 0.443805 | 3.2:-78865567 | MS.gene06523:CDS |
| CCTGAAGAGAGGTACCTTGT+AGG | 0.443876 | 3.2:-78863434 | MS.gene06523:CDS |
| GGATTCTTACCGGAAATGGC+TGG | 0.446902 | 3.2:+78866255 | None:intergenic |
| AAATGAGCATTATAATCATT+AGG | 0.453239 | 3.2:+78863696 | None:intergenic |
| TTAGGAATTGCCAGGGTCCC+TGG | 0.454586 | 3.2:-78863590 | MS.gene06523:CDS |
| GTGAACACAAGGCCTATTCC+AGG | 0.455129 | 3.2:+78863572 | None:intergenic |
| CAAAGTTCCGCGAGGGTGCT+TGG | 0.456491 | 3.2:-78863742 | MS.gene06523:CDS |
| AGGGCCTGACGTGTCACTTA+AGG | 0.456997 | 3.2:-78862838 | MS.gene06523:CDS |
| AAACAAATGGATCTTGAACC+TGG | 0.462548 | 3.2:-78866973 | None:intergenic |
| TATGAACAACCTTAACTCTT+GGG | 0.463219 | 3.2:+78864114 | None:intergenic |
| TCAGGGGTTACATGAGGAAC+AGG | 0.463891 | 3.2:+78863452 | None:intergenic |
| GTCCAAGCTTAGGAATTGCC+AGG | 0.464211 | 3.2:-78863598 | MS.gene06523:CDS |
| AGGAAGAGGGCAAGGAGGAT+TGG | 0.469920 | 3.2:+78863716 | None:intergenic |
| CTAGCTTTAGGTCCAAGCTT+AGG | 0.471303 | 3.2:-78863608 | MS.gene06523:CDS |
| CTACAAGGTACCTCTCTTCA+GGG | 0.471608 | 3.2:+78863435 | None:intergenic |
| ACTAGGACACGGTGATATGC+AGG | 0.474345 | 3.2:+78863497 | None:intergenic |
| GCACTTATATTGGCATATAT+GGG | 0.478501 | 3.2:-78864479 | MS.gene06523:CDS |
| AAGAACTTGAACATATAATA+CGG | 0.479223 | 3.2:+78865603 | None:intergenic |
| TTGCTCCAATTGTGCTGACA+TGG | 0.480391 | 3.2:-78865698 | MS.gene06523:CDS |
| GCATACTGCTCTTCTGATTG+TGG | 0.480604 | 3.2:-78866322 | MS.gene06523:CDS |
| ACAAAGCGGGAGAAATTCGC+TGG | 0.480919 | 3.2:+78863530 | None:intergenic |
| TTCATCATTCTTGAAGAAGC+TGG | 0.483278 | 3.2:-78862901 | MS.gene06523:CDS |
| TTGGGAAACAGCCAAGAGAT+TGG | 0.488433 | 3.2:+78864132 | None:intergenic |
| CTCAGCAGTATCTGGTCTTG+AGG | 0.489203 | 3.2:-78865986 | MS.gene06523:CDS |
| ACCCTGGCAATTCCTAAGCT+TGG | 0.490023 | 3.2:+78863596 | None:intergenic |
| AACAGCCAAGAGATTGGCTC+TGG | 0.490204 | 3.2:+78864138 | None:intergenic |
| CTTTATGCTGCTCAAGAAGC+TGG | 0.492942 | 3.2:-78862969 | MS.gene06523:CDS |
| TTGAACCTGGGAGGAAGTGT+TGG | 0.499293 | 3.2:-78866960 | MS.gene06523:CDS |
| GCGTATATAATATATTCAAA+TGG | 0.503557 | 3.2:-78865653 | MS.gene06523:CDS |
| CAGGTCCTACGCGGCCTACA+AGG | 0.504050 | 3.2:+78863420 | None:intergenic |
| CTACTGGCTTACCAGAGTCT+TGG | 0.504452 | 3.2:-78866795 | MS.gene06523:CDS |
| CTACTGTGCATTAGCACACT+TGG | 0.504767 | 3.2:-78865675 | MS.gene06523:CDS |
| CTTAACAGATGTTATTGAGA+TGG | 0.506593 | 3.2:-78863102 | MS.gene06523:CDS |
| CTTTCGGGCGCAGCATCCAT+CGG | 0.509696 | 3.2:+78863077 | None:intergenic |
| CTATAAGATCGATGAGTAGC+AGG | 0.510208 | 3.2:+78863401 | None:intergenic |
| AATCCTACAGACACGCTACC+TGG | 0.511247 | 3.2:+78863140 | None:intergenic |
| AGCTATTCTAGCTTCTGTTG+TGG | 0.512141 | 3.2:-78864201 | MS.gene06523:CDS |
| CACTATGGTACACATAAGGT+TGG | 0.512279 | 3.2:-78865729 | MS.gene06523:CDS |
| TGCAGAAAGCGTGAGATGGC+CGG | 0.514525 | 3.2:-78864234 | MS.gene06523:intron |
| ATGTTCCACTGATGATTGCT+TGG | 0.514640 | 3.2:+78864174 | None:intergenic |
| TGAACCTGGGAGGAAGTGTT+GGG | 0.514870 | 3.2:-78866959 | MS.gene06523:CDS |
| GATTCTTACCGGAAATGGCT+GGG | 0.515007 | 3.2:+78866256 | None:intergenic |
| AAACACCTGGGAAATGCATC+AGG | 0.515977 | 3.2:-78863996 | MS.gene06523:intron |
| ATGGATATAATTTCTTGAGA+AGG | 0.521502 | 3.2:-78862869 | MS.gene06523:CDS |
| GGAGAAATTCGCTGGGATGC+CGG | 0.528570 | 3.2:+78863538 | None:intergenic |
| ATAAACCAGAGCCAATCTCT+TGG | 0.536473 | 3.2:-78864143 | MS.gene06523:CDS |
| CTATTCTAGCTTCTGTTGTG+GGG | 0.536872 | 3.2:-78864199 | MS.gene06523:CDS |
| TGGTACTTGTATGGTAATTG+GGG | 0.541658 | 3.2:-78866292 | MS.gene06523:CDS |
| TCAACACTATGGTACACATA+AGG | 0.544559 | 3.2:-78865733 | MS.gene06523:CDS |
| GAAGTGTTGGGATAGTTCAA+AGG | 0.545829 | 3.2:-78866947 | MS.gene06523:intron |
| CTAGTGAAACCTTGTTGTGA+AGG | 0.546959 | 3.2:+78863639 | None:intergenic |
| ACTTGTATGGTAATTGGGGA+TGG | 0.550558 | 3.2:-78866288 | MS.gene06523:CDS |
| CAACCTCCAATAAAGAAACT+GGG | 0.551575 | 3.2:+78862811 | None:intergenic |
| AGTCAGCAAAGTGTGCAGCC+AGG | 0.551960 | 3.2:-78863158 | MS.gene06523:CDS |
| CATATACAACACCAAGACTC+TGG | 0.553981 | 3.2:+78866784 | None:intergenic |
| CTATCCCAACACTTCCTCCC+AGG | 0.555040 | 3.2:+78866955 | None:intergenic |
| ATATATGCCAATATAAGTGC+AGG | 0.555536 | 3.2:+78864482 | None:intergenic |
| ATTTCGAGACACAAAACACC+TGG | 0.555691 | 3.2:-78864009 | MS.gene06523:CDS |
| AGGGAGGTTGGTGACAAAGC+GGG | 0.557999 | 3.2:+78863517 | None:intergenic |
| TTAGAATACTCTTTCTCTGG+AGG | 0.560946 | 3.2:+78866378 | None:intergenic |
| ACTATGGTACACATAAGGTT+GGG | 0.561821 | 3.2:-78865728 | MS.gene06523:CDS |
| AACAAATGGATCTTGAACCT+GGG | 0.562805 | 3.2:-78866972 | None:intergenic |
| GCATTATAATCATTAGGAAG+AGG | 0.565169 | 3.2:+78863702 | None:intergenic |
| TCTTGAGAAGGAATTGTAGA+GGG | 0.569945 | 3.2:-78862857 | MS.gene06523:CDS |
| ACCAGTATGAAGCAAGTGAT+GGG | 0.573753 | 3.2:+78865771 | None:intergenic |
| TGAGGTTGGTGTGCAAATGC+AGG | 0.574824 | 3.2:-78863006 | MS.gene06523:CDS |
| GTGTTCACTGATCTCACTAC+CGG | 0.575606 | 3.2:-78863557 | MS.gene06523:CDS |
| TATGATTGGTATCGAACTCG+TGG | 0.577585 | 3.2:-78863287 | MS.gene06523:CDS |
| CACCAGTATGAAGCAAGTGA+TGG | 0.581489 | 3.2:+78865770 | None:intergenic |
| CATTATAATCATTAGGAAGA+GGG | 0.585288 | 3.2:+78863703 | None:intergenic |
| TGGCTGCAGAAAGCGTGAGA+TGG | 0.586100 | 3.2:-78864238 | MS.gene06523:intron |
| AAGGCCTATTCCAGGGACCC+TGG | 0.586920 | 3.2:+78863580 | None:intergenic |
| ATTCTTACCGGAAATGGCTG+GGG | 0.587473 | 3.2:+78866257 | None:intergenic |
| AGAATAGCTAAGATAAGCAC+CGG | 0.592033 | 3.2:+78864215 | None:intergenic |
| CAGCCAGGTAGCGTGTCTGT+AGG | 0.592543 | 3.2:-78863143 | MS.gene06523:CDS |
| ACAAACACATATTTGAAGAG+TGG | 0.592621 | 3.2:+78866636 | None:intergenic |
| AGTATGAGCATTGAGGATGA+TGG | 0.593967 | 3.2:-78863260 | MS.gene06523:CDS |
| TTCTTGAGAAGGAATTGTAG+AGG | 0.594347 | 3.2:-78862858 | MS.gene06523:CDS |
| TGAATATGACCTTCACAACA+AGG | 0.594779 | 3.2:-78863648 | MS.gene06523:CDS |
| GTGGTGTTTCTTGAACATGA+TGG | 0.600895 | 3.2:+78865960 | None:intergenic |
| ACGGTGATATGCAGGGAGGT+TGG | 0.607011 | 3.2:+78863505 | None:intergenic |
| TCTTATATGAAAACAAAGCA+AGG | 0.609165 | 3.2:-78862924 | MS.gene06523:CDS |
| ATATACCTGATGCATTTCCC+AGG | 0.610886 | 3.2:+78863991 | None:intergenic |
| AAAAGACAAGGATAAGTGGA+TGG | 0.612497 | 3.2:-78865578 | MS.gene06523:CDS |
| AGAGCTGATGATAATGGGGA+AGG | 0.616664 | 3.2:-78866606 | MS.gene06523:intron |
| ATGGCAATGAATACCTGGAA+CGG | 0.617377 | 3.2:+78864397 | None:intergenic |
| CTCATGTAACCCCTGAAGAG+AGG | 0.618572 | 3.2:-78863445 | MS.gene06523:CDS |
| GGAACCTTAAGTGACACGTC+AGG | 0.620717 | 3.2:+78862834 | None:intergenic |
| TCCAAGCTTAGGAATTGCCA+GGG | 0.621282 | 3.2:-78863597 | MS.gene06523:CDS |
| TGGGAATAGTATGAGCATTG+AGG | 0.624273 | 3.2:-78863267 | MS.gene06523:CDS |
| AGGTACCTTGTAGGCCGCGT+AGG | 0.626410 | 3.2:-78863425 | MS.gene06523:CDS |
| TAATCATTAGGAAGAGGGCA+AGG | 0.630253 | 3.2:+78863708 | None:intergenic |
| TGTTATTGAGATGGAACCGA+TGG | 0.632286 | 3.2:-78863093 | MS.gene06523:CDS |
| TGAACACAAGGCCTATTCCA+GGG | 0.632355 | 3.2:+78863573 | None:intergenic |
| AGTGGATGGCTGTCTTTGGG+TGG | 0.633140 | 3.2:-78865564 | MS.gene06523:CDS |
| ACTTTCTTCATATAAGATGG+AGG | 0.634857 | 3.2:-78866403 | MS.gene06523:CDS |
| CTCTCTTCAGGGGTTACATG+AGG | 0.638283 | 3.2:+78863446 | None:intergenic |
| GAAAGAGCTTTATATACATG+CGG | 0.639602 | 3.2:+78865627 | None:intergenic |
| GGGAGCCAAGCAATCATCAG+TGG | 0.640267 | 3.2:-78864179 | MS.gene06523:CDS |
| TCTTAGAGCTGATGATAATG+GGG | 0.641130 | 3.2:-78866610 | MS.gene06523:CDS |
| AAGTGCAGGATATACCAGAA+AGG | 0.642926 | 3.2:+78864496 | None:intergenic |
| AACCTCCAATAAAGAAACTG+GGG | 0.647207 | 3.2:+78862812 | None:intergenic |
| ATGATTGGTATCGAACTCGT+GGG | 0.648080 | 3.2:-78863286 | MS.gene06523:CDS |
| CTAGGACACGGTGATATGCA+GGG | 0.648925 | 3.2:+78863498 | None:intergenic |
| TAGTGAGATCAGTGAACACA+AGG | 0.650751 | 3.2:+78863561 | None:intergenic |
| CAAAGCGGGAGAAATTCGCT+GGG | 0.651381 | 3.2:+78863531 | None:intergenic |
| TGAAAGTGAGACAAGGTCTG+AGG | 0.659981 | 3.2:-78863024 | MS.gene06523:CDS |
| CTGCGCCCGAAAGACGAGTG+AGG | 0.673470 | 3.2:-78863067 | MS.gene06523:CDS |
| AGTGAGACAAGGTCTGAGGT+TGG | 0.674888 | 3.2:-78863020 | MS.gene06523:CDS |
| CAGGGAGGTTGGTGACAAAG+CGG | 0.679360 | 3.2:+78863516 | None:intergenic |
| TCACTGACAAAGTTCCGCGA+GGG | 0.681855 | 3.2:-78863749 | MS.gene06523:CDS |
| ATGATCATGAAAGTGAGACA+AGG | 0.691543 | 3.2:-78863031 | MS.gene06523:CDS |
| TTGGTAGCCAAGCACCCTCG+CGG | 0.692674 | 3.2:+78863735 | None:intergenic |
| AAATGGATCTTGAACCTGGG+AGG | 0.693417 | 3.2:-78866969 | MS.gene06523:CDS |
| ACCTCCAATAAAGAAACTGG+GGG | 0.693955 | 3.2:+78862813 | None:intergenic |
| TACAAGGTACCTCTCTTCAG+GGG | 0.697102 | 3.2:+78863436 | None:intergenic |
| TCATTAGGAAGAGGGCAAGG+AGG | 0.700116 | 3.2:+78863711 | None:intergenic |
| TTCACTGACAAAGTTCCGCG+AGG | 0.701157 | 3.2:-78863750 | MS.gene06523:CDS |
| TTTCGAGACACAAAACACCT+GGG | 0.702119 | 3.2:-78864008 | MS.gene06523:CDS |
| GAAGTGATTACTTACACTGG+TGG | 0.711878 | 3.2:+78865941 | None:intergenic |
| CAACATCTTGATGAACGTCG+CGG | 0.736249 | 3.2:+78863357 | None:intergenic |
| GATGAGTAGCAGGTCCTACG+CGG | 0.737138 | 3.2:+78863411 | None:intergenic |
| GGACACGGTGATATGCAGGG+AGG | 0.810812 | 3.2:+78863501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAAATTTGATACTTTA+AGG | + | chr3.2:78864935-78864954 | None:intergenic | 15.0% |
| !! | GAATATTTATAGATAGATAT+AGG | + | chr3.2:78864328-78864347 | None:intergenic | 15.0% |
| !! | GTGAATATATTTCAATTAAA+TGG | - | chr3.2:78863883-78863902 | MS.gene06523:intron | 15.0% |
| !! | TACTAAATTTGATACTTTAA+GGG | + | chr3.2:78864934-78864953 | None:intergenic | 15.0% |
| !!! | GAAAACATTATACAAAATTT+TGG | - | chr3.2:78865500-78865519 | MS.gene06523:intron | 15.0% |
| !! | AAAAAACAATAGGAAACAAA+GGG | + | chr3.2:78865959-78865978 | None:intergenic | 20.0% |
| !! | AAATGAGCATTATAATCATT+AGG | + | chr3.2:78866065-78866084 | None:intergenic | 20.0% |
| !! | AAGAACTTGAACATATAATA+CGG | + | chr3.2:78864158-78864177 | None:intergenic | 20.0% |
| !! | ATATATACTTGAACAAATTC+TGG | - | chr3.2:78864883-78864902 | MS.gene06523:intron | 20.0% |
| !! | GCGTATATAATATATTCAAA+TGG | - | chr3.2:78864105-78864124 | MS.gene06523:CDS | 20.0% |
| !! | TAATGATTATAATGCTCATT+TGG | - | chr3.2:78866064-78866083 | MS.gene06523:intron | 20.0% |
| !! | TGAATATTTGTGAAATGAAA+TGG | - | chr3.2:78862876-78862895 | MS.gene06523:CDS | 20.0% |
| !! | TGTAAAACATTGTGAAATAA+GGG | + | chr3.2:78863534-78863553 | None:intergenic | 20.0% |
| !! | TTCCTATAAAAAGTGATATA+TGG | + | chr3.2:78865383-78865402 | None:intergenic | 20.0% |
| !! | TTGTAAAACATTGTGAAATA+AGG | + | chr3.2:78863535-78863554 | None:intergenic | 20.0% |
| !! | TTTGGATTTAAAGAATAAGT+AGG | + | chr3.2:78864296-78864315 | None:intergenic | 20.0% |
| !!! | TATAGATAGATATAGGTTTT+GGG | + | chr3.2:78864321-78864340 | None:intergenic | 20.0% |
| !!! | TTATAGATAGATATAGGTTT+TGG | + | chr3.2:78864322-78864341 | None:intergenic | 20.0% |
| ! | AATAAAAACCCACATTAGAA+AGG | + | chr3.2:78862850-78862869 | None:intergenic | 25.0% |
| ! | ACAATGATTTAATCAAGACA+TGG | - | chr3.2:78864846-78864865 | MS.gene06523:intron | 25.0% |
| ! | AGGGAAATAATGATAGATAA+AGG | + | chr3.2:78864915-78864934 | None:intergenic | 25.0% |
| ! | AGTACTATGATTCTTAGAAA+TGG | - | chr3.2:78864485-78864504 | MS.gene06523:CDS | 25.0% |
| ! | ATGGATATAATTTCTTGAGA+AGG | - | chr3.2:78866889-78866908 | MS.gene06523:intron | 25.0% |
| ! | ATTAACTAGATAAAACACAG+TGG | - | chr3.2:78865805-78865824 | MS.gene06523:intron | 25.0% |
| ! | ATTTCACACATACAAAAACT+AGG | + | chr3.2:78866281-78866300 | None:intergenic | 25.0% |
| ! | CAAAAAACAATAGGAAACAA+AGG | + | chr3.2:78865960-78865979 | None:intergenic | 25.0% |
| ! | CATACATCAGAAAAAATACA+TGG | - | chr3.2:78865663-78865682 | MS.gene06523:CDS | 25.0% |
| ! | CATTATAATCATTAGGAAGA+GGG | + | chr3.2:78866058-78866077 | None:intergenic | 25.0% |
| ! | GGAATATTACTTTGTATAAC+AGG | - | chr3.2:78864215-78864234 | MS.gene06523:CDS | 25.0% |
| ! | GTAAAACATTGTGAAATAAG+GGG | + | chr3.2:78863533-78863552 | None:intergenic | 25.0% |
| ! | TAAAACATTGTGAAATAAGG+GGG | + | chr3.2:78863532-78863551 | None:intergenic | 25.0% |
| ! | TAGTTAATGAACTTCAGTTT+AGG | - | chr3.2:78863578-78863597 | MS.gene06523:CDS | 25.0% |
| ! | TATAGGTGTATAGTAAGATA+TGG | - | chr3.2:78866375-78866394 | MS.gene06523:CDS | 25.0% |
| ! | TATTTGTGAAATGAAATGGA+TGG | - | chr3.2:78862880-78862899 | MS.gene06523:CDS | 25.0% |
| ! | TCTTATATGAAAACAAAGCA+AGG | - | chr3.2:78866834-78866853 | MS.gene06523:intron | 25.0% |
| ! | TCTTGGTCATTTCAATTATA+TGG | - | chr3.2:78865115-78865134 | MS.gene06523:intron | 25.0% |
| ! | TTTACATCCCAGAAATTAAT+TGG | - | chr3.2:78865691-78865710 | MS.gene06523:CDS | 25.0% |
| !! | AATTTAGAATACTCTTTCTC+TGG | + | chr3.2:78863386-78863405 | None:intergenic | 25.0% |
| !! | ATAGATAGATATAGGTTTTG+GGG | + | chr3.2:78864320-78864339 | None:intergenic | 25.0% |
| !! | CTGACAATTTGTTTATAAGT+GGG | + | chr3.2:78864563-78864582 | None:intergenic | 25.0% |
| !! | CTGATTTTATCCAATATGAT+TGG | - | chr3.2:78866457-78866476 | MS.gene06523:CDS | 25.0% |
| !! | TGACAATTTGTTTATAAGTG+GGG | + | chr3.2:78864562-78864581 | None:intergenic | 25.0% |
| !!! | AGACAACTTTTTTACTAGTT+CGG | + | chr3.2:78866439-78866458 | None:intergenic | 25.0% |
| !!! | CTCTTTATTCATTGATTTGT+AGG | - | chr3.2:78863285-78863304 | MS.gene06523:CDS | 25.0% |
| !!! | CTTTGTTTCCTATTGTTTTT+TGG | - | chr3.2:78865958-78865977 | MS.gene06523:CDS | 25.0% |
| !!! | TGCCATATATCACTTTTTAT+AGG | - | chr3.2:78865378-78865397 | MS.gene06523:intron | 25.0% |
| AATAGATTTGAGCTTTCACA+TGG | - | chr3.2:78864996-78865015 | MS.gene06523:intron | 30.0% | |
| ACAAACACATATTTGAAGAG+TGG | + | chr3.2:78863125-78863144 | None:intergenic | 30.0% | |
| ACAAGATTTCTTCATTGTTC+TGG | - | chr3.2:78863917-78863936 | MS.gene06523:intron | 30.0% | |
| ACTATGATTCTTAGAAATGG+TGG | - | chr3.2:78864488-78864507 | MS.gene06523:CDS | 30.0% | |
| ACTTTCTTCATATAAGATGG+AGG | - | chr3.2:78863355-78863374 | MS.gene06523:CDS | 30.0% | |
| AGCACTTTCTTCATATAAGA+TGG | - | chr3.2:78863352-78863371 | MS.gene06523:CDS | 30.0% | |
| AGTTACAGATTAACTGTGAT+TGG | - | chr3.2:78866543-78866562 | MS.gene06523:intron | 30.0% | |
| ATATATGCCAATATAAGTGC+AGG | + | chr3.2:78865279-78865298 | None:intergenic | 30.0% | |
| ATATGAGTTCGAACTGTAAT+CGG | - | chr3.2:78863611-78863630 | MS.gene06523:CDS | 30.0% | |
| ATCAGAAAAAATACATGGTC+AGG | - | chr3.2:78865668-78865687 | MS.gene06523:CDS | 30.0% | |
| ATCTGCAGACAAAAATCAAT+AGG | + | chr3.2:78863958-78863977 | None:intergenic | 30.0% | |
| ATGAGCATCCAATTAATTTC+TGG | + | chr3.2:78865702-78865721 | None:intergenic | 30.0% | |
| CCACTTATAAACAAATTGTC+AGG | - | chr3.2:78864561-78864580 | MS.gene06523:intron | 30.0% | |
| CTATAATATGCTATTGTACC+AGG | + | chr3.2:78865481-78865500 | None:intergenic | 30.0% | |
| CTTAACAGATGTTATTGAGA+TGG | - | chr3.2:78866656-78866675 | MS.gene06523:CDS | 30.0% | |
| GAGACTAATGAAGAGATTTA+TGG | - | chr3.2:78863062-78863081 | MS.gene06523:CDS | 30.0% | |
| GCACTTATATTGGCATATAT+GGG | - | chr3.2:78865279-78865298 | MS.gene06523:intron | 30.0% | |
| GCATTATAATCATTAGGAAG+AGG | + | chr3.2:78866059-78866078 | None:intergenic | 30.0% | |
| GTGCTTGTAAAAACATACAA+TGG | + | chr3.2:78863017-78863036 | None:intergenic | 30.0% | |
| TATGAACAACCTTAACTCTT+GGG | + | chr3.2:78865647-78865666 | None:intergenic | 30.0% | |
| TCAAGTTCTTGAAAAAGACA+AGG | - | chr3.2:78864168-78864187 | MS.gene06523:CDS | 30.0% | |
| TGAGCATCCAATTAATTTCT+GGG | + | chr3.2:78865701-78865720 | None:intergenic | 30.0% | |
| TGCACTTATATTGGCATATA+TGG | - | chr3.2:78865278-78865297 | MS.gene06523:intron | 30.0% | |
| TTCTTAGAGCTGATGATAAT+GGG | - | chr3.2:78863147-78863166 | MS.gene06523:CDS | 30.0% | |
| TTGAAAAAGACAAGGATAAG+TGG | - | chr3.2:78864176-78864195 | MS.gene06523:CDS | 30.0% | |
| TTGGTACTTGTATGGTAATT+GGG | - | chr3.2:78863465-78863484 | MS.gene06523:CDS | 30.0% | |
| TTTACTTACTCCGGATTATT+GGG | - | chr3.2:78863652-78863671 | MS.gene06523:CDS | 30.0% | |
| TTTCAATTATATGGCCATTC+AGG | - | chr3.2:78865124-78865143 | MS.gene06523:intron | 30.0% | |
| ! | CCTGACAATTTGTTTATAAG+TGG | + | chr3.2:78864564-78864583 | None:intergenic | 30.0% |
| ! | GAAAGAGCTTTATATACATG+CGG | + | chr3.2:78864134-78864153 | None:intergenic | 30.0% |
| ! | GACAATTTGTTTATAAGTGG+GGG | + | chr3.2:78864561-78864580 | None:intergenic | 30.0% |
| ! | TGATGATTTTCATGTATGTG+TGG | - | chr3.2:78863242-78863261 | MS.gene06523:CDS | 30.0% |
| ! | TTGATTTTCAGAGAGATTCT+TGG | - | chr3.2:78862928-78862947 | MS.gene06523:CDS | 30.0% |
| ! | TTTTACTAGTTCGGTTTCAA+AGG | + | chr3.2:78866430-78866449 | None:intergenic | 30.0% |
| !! | AGCTCAAATCTATTGATTTG+AGG | + | chr3.2:78864990-78865009 | None:intergenic | 30.0% |
| !! | GCTCAAATCTATTGATTTGA+GGG | + | chr3.2:78864989-78865008 | None:intergenic | 30.0% |
| !!! | AATCAACAATGTTTTGATGC+AGG | - | chr3.2:78865847-78865866 | MS.gene06523:intron | 30.0% |
| !!! | AGTATTTTAACCAACCTGAA+TGG | + | chr3.2:78865141-78865160 | None:intergenic | 30.0% |
| !!! | ATCAACAATGTTTTGATGCA+GGG | - | chr3.2:78865848-78865867 | MS.gene06523:intron | 30.0% |
| AAAAGACAAGGATAAGTGGA+TGG | - | chr3.2:78864180-78864199 | MS.gene06523:CDS | 35.0% | |
| AAACAAAGGGCTAAAATTGG+TGG | + | chr3.2:78865946-78865965 | None:intergenic | 35.0% | |
| AACCTCCAATAAAGAAACTG+GGG | + | chr3.2:78866949-78866968 | None:intergenic | 35.0% | |
| AAGACATGGAATAAGTTCTC+TGG | - | chr3.2:78864860-78864879 | MS.gene06523:intron | 35.0% | |
| AATTATATGGCCATTCAGGT+TGG | - | chr3.2:78865128-78865147 | MS.gene06523:intron | 35.0% | |
| ACAACAAGGTTTCACTAGAA+TGG | - | chr3.2:78866124-78866143 | MS.gene06523:intron | 35.0% | |
| ACTATGGTACACATAAGGTT+GGG | - | chr3.2:78864030-78864049 | MS.gene06523:CDS | 35.0% | |
| AGAATAGCTAAGATAAGCAC+CGG | + | chr3.2:78865546-78865565 | None:intergenic | 35.0% | |
| AGGAAACAAAGGGCTAAAAT+TGG | + | chr3.2:78865949-78865968 | None:intergenic | 35.0% | |
| ATGATCATGAAAGTGAGACA+AGG | - | chr3.2:78866727-78866746 | MS.gene06523:CDS | 35.0% | |
| ATTTGACACTGCTAACATGT+TGG | + | chr3.2:78863860-78863879 | None:intergenic | 35.0% | |
| CAACCTCCAATAAAGAAACT+GGG | + | chr3.2:78866950-78866969 | None:intergenic | 35.0% | |
| CACATACAAAAACTAGGACA+CGG | + | chr3.2:78866275-78866294 | None:intergenic | 35.0% | |
| CGACAGATCCAAAAAACAAT+AGG | + | chr3.2:78865969-78865988 | None:intergenic | 35.0% | |
| CTACTATCACCAAAGAAGTT+AGG | + | chr3.2:78865909-78865928 | None:intergenic | 35.0% | |
| CTAGAAGTGATTACTTACAC+TGG | + | chr3.2:78863823-78863842 | None:intergenic | 35.0% | |
| CTCTGATACCATCTTAGAAA+TGG | - | chr3.2:78864719-78864738 | MS.gene06523:intron | 35.0% | |
| CTTGGTACTTGTATGGTAAT+TGG | - | chr3.2:78863464-78863483 | MS.gene06523:CDS | 35.0% | |
| CTTTACTTACTCCGGATTAT+TGG | - | chr3.2:78863651-78863670 | MS.gene06523:CDS | 35.0% | |
| GAGTTCGATACCAATCATAT+TGG | + | chr3.2:78866470-78866489 | None:intergenic | 35.0% | |
| GATATATGGCAATGAATACC+TGG | + | chr3.2:78865369-78865388 | None:intergenic | 35.0% | |
| GATTCTTAGAAATGGTGGTT+GGG | - | chr3.2:78864493-78864512 | MS.gene06523:CDS | 35.0% | |
| GCATTTCACCTTTCTAATGT+GGG | - | chr3.2:78862839-78862858 | MS.gene06523:CDS | 35.0% | |
| GGTATATCCTGCACTTATAT+TGG | - | chr3.2:78865269-78865288 | MS.gene06523:intron | 35.0% | |
| GTACTGTTGTAAGAGTAAGA+CGG | - | chr3.2:78864355-78864374 | MS.gene06523:intron | 35.0% | |
| GTATGAACAACCTTAACTCT+TGG | + | chr3.2:78865648-78865667 | None:intergenic | 35.0% | |
| GTTCTTAGAGCTGATGATAA+TGG | - | chr3.2:78863146-78863165 | MS.gene06523:CDS | 35.0% | |
| TAATCCGGAGTAAGTAAAGT+CGG | + | chr3.2:78863650-78863669 | None:intergenic | 35.0% | |
| TCAACACTATGGTACACATA+AGG | - | chr3.2:78864025-78864044 | MS.gene06523:CDS | 35.0% | |
| TCATCATGAGCAAAAGAAAC+AGG | + | chr3.2:78863228-78863247 | None:intergenic | 35.0% | |
| TCTTGAGAAGGAATTGTAGA+GGG | - | chr3.2:78866901-78866920 | MS.gene06523:intron | 35.0% | |
| TGAAGCGTGAACATAAATGA+CGG | - | chr3.2:78864643-78864662 | MS.gene06523:CDS | 35.0% | |
| TGAATATGACCTTCACAACA+AGG | - | chr3.2:78866110-78866129 | MS.gene06523:intron | 35.0% | |
| TGATACCATCTTAGAAATGG+TGG | - | chr3.2:78864722-78864741 | MS.gene06523:intron | 35.0% | |
| TGATTCTTAGAAATGGTGGT+TGG | - | chr3.2:78864492-78864511 | MS.gene06523:CDS | 35.0% | |
| TGCATTTCACCTTTCTAATG+TGG | - | chr3.2:78862838-78862857 | MS.gene06523:CDS | 35.0% | |
| TGGTACTTGTATGGTAATTG+GGG | - | chr3.2:78863466-78863485 | MS.gene06523:CDS | 35.0% | |
| TGTTATCAGGTTTCCGTTAT+CGG | + | chr3.2:78864674-78864693 | None:intergenic | 35.0% | |
| TGTTATGCTCTTATAGACCT+GGG | - | chr3.2:78865197-78865216 | MS.gene06523:intron | 35.0% | |
| TTACTTACTCCGGATTATTG+GGG | - | chr3.2:78863653-78863672 | MS.gene06523:CDS | 35.0% | |
| TTAGAATACTCTTTCTCTGG+AGG | + | chr3.2:78863383-78863402 | None:intergenic | 35.0% | |
| TTCATCATTCTTGAAGAAGC+TGG | - | chr3.2:78866857-78866876 | MS.gene06523:intron | 35.0% | |
| TTCTTGAGAAGGAATTGTAG+AGG | - | chr3.2:78866900-78866919 | MS.gene06523:intron | 35.0% | |
| TTGTTATGCTCTTATAGACC+TGG | - | chr3.2:78865196-78865215 | MS.gene06523:intron | 35.0% | |
| TTGTTTGCACTTCAACACTA+TGG | - | chr3.2:78864014-78864033 | MS.gene06523:CDS | 35.0% | |
| TTTATTTGCAATGCCTTTCC+TGG | - | chr3.2:78865428-78865447 | MS.gene06523:intron | 35.0% | |
| ! | AGGTTTCTAAAAAGATGCCT+CGG | + | chr3.2:78864455-78864474 | None:intergenic | 35.0% |
| ! | CTCTTATGGTTGTTATTACC+TGG | - | chr3.2:78865460-78865479 | MS.gene06523:intron | 35.0% |
| ! | CTTTGGTGATAGTAGTTTGT+TGG | - | chr3.2:78865914-78865933 | MS.gene06523:intron | 35.0% |
| ! | TCTTAGAGCTGATGATAATG+GGG | - | chr3.2:78863148-78863167 | MS.gene06523:CDS | 35.0% |
| ! | TGTTAAAAGACATTTTCCCC+AGG | + | chr3.2:78865217-78865236 | None:intergenic | 35.0% |
| ! | TTTTGTGTCTCGAAATCCAA+TGG | + | chr3.2:78865745-78865764 | None:intergenic | 35.0% |
| !! | TCATAGTACTTTTGACTCTG+AGG | + | chr3.2:78864475-78864494 | None:intergenic | 35.0% |
| !! | TGATAATGGGGAAGGTAATA+AGG | - | chr3.2:78863160-78863179 | MS.gene06523:CDS | 35.0% |
| !!! | AGATATAGGTTTTGGGGTTT+TGG | + | chr3.2:78864314-78864333 | None:intergenic | 35.0% |
| !!! | GCACACTTTCTTTTGTTTTC+TGG | - | chr3.2:78863084-78863103 | MS.gene06523:CDS | 35.0% |
| AACAACGTGCCTAACTTCTT+TGG | - | chr3.2:78865897-78865916 | MS.gene06523:intron | 40.0% | |
| AAGAAGCTGGCACTTAACTA+TGG | - | chr3.2:78866870-78866889 | MS.gene06523:intron | 40.0% | |
| AAGTGCAGGATATACCAGAA+AGG | + | chr3.2:78865265-78865284 | None:intergenic | 40.0% | |
| ACCAGTATGAAGCAAGTGAT+GGG | + | chr3.2:78863990-78864009 | None:intergenic | 40.0% | |
| ACCATCTTAGAAATGGTGGT+TGG | - | chr3.2:78864726-78864745 | MS.gene06523:intron | 40.0% | |
| ACCTCCAATAAAGAAACTGG+GGG | + | chr3.2:78866948-78866967 | None:intergenic | 40.0% | |
| ACTTGTATGGTAATTGGGGA+TGG | - | chr3.2:78863470-78863489 | MS.gene06523:CDS | 40.0% | |
| AGTTCGAACTCATATACTCC+AGG | + | chr3.2:78863606-78863625 | None:intergenic | 40.0% | |
| ATAAACCAGAGCCAATCTCT+TGG | - | chr3.2:78865615-78865634 | MS.gene06523:CDS | 40.0% | |
| ATAAGTGGATGGCTGTCTTT+GGG | - | chr3.2:78864191-78864210 | MS.gene06523:CDS | 40.0% | |
| ATATACCTGATGCATTTCCC+AGG | + | chr3.2:78865770-78865789 | None:intergenic | 40.0% | |
| ATGGCAATGAATACCTGGAA+CGG | + | chr3.2:78865364-78865383 | None:intergenic | 40.0% | |
| ATGTTCCACTGATGATTGCT+TGG | + | chr3.2:78865587-78865606 | None:intergenic | 40.0% | |
| ATTTCGAGACACAAAACACC+TGG | - | chr3.2:78865749-78865768 | MS.gene06523:CDS | 40.0% | |
| CACTATGGTACACATAAGGT+TGG | - | chr3.2:78864029-78864048 | MS.gene06523:CDS | 40.0% | |
| CATATACAACACCAAGACTC+TGG | + | chr3.2:78862977-78862996 | None:intergenic | 40.0% | |
| CATTGTGAAATAAGGGGGAT+AGG | + | chr3.2:78863527-78863546 | None:intergenic | 40.0% | |
| CATTGTTAAGAGTCCCACAT+CGG | + | chr3.2:78864832-78864851 | None:intergenic | 40.0% | |
| CCAACCTCCAATAAAGAAAC+TGG | + | chr3.2:78866951-78866970 | None:intergenic | 40.0% | |
| CCAGTTTCTTTATTGGAGGT+TGG | - | chr3.2:78866948-78866967 | MS.gene06523:CDS | 40.0% | |
| CCATCTTAGAAATGGTGGTT+GGG | - | chr3.2:78864727-78864746 | MS.gene06523:intron | 40.0% | |
| CTATAAGATCGATGAGTAGC+AGG | + | chr3.2:78866360-78866379 | None:intergenic | 40.0% | |
| CTATGTATTGCTGTCACCAT+TGG | - | chr3.2:78865726-78865745 | MS.gene06523:CDS | 40.0% | |
| CTGCTACTCATCGATCTTAT+AGG | - | chr3.2:78866358-78866377 | MS.gene06523:CDS | 40.0% | |
| CTTCTGATTGTGGTTCTTCT+TGG | - | chr3.2:78863446-78863465 | MS.gene06523:CDS | 40.0% | |
| GAAGCGTGAACATAAATGAC+GGG | - | chr3.2:78864644-78864663 | MS.gene06523:CDS | 40.0% | |
| GAAGTGATTACTTACACTGG+TGG | + | chr3.2:78863820-78863839 | None:intergenic | 40.0% | |
| GATAGGATTCTTACCGGAAA+TGG | + | chr3.2:78863510-78863529 | None:intergenic | 40.0% | |
| GCACACAAAGTCAACACATA+AGG | + | chr3.2:78865071-78865090 | None:intergenic | 40.0% | |
| GCTGGTATTGCTTTCATTCT+TGG | - | chr3.2:78866807-78866826 | MS.gene06523:CDS | 40.0% | |
| GGTTCTTCTTGGTACTTGTA+TGG | - | chr3.2:78863457-78863476 | MS.gene06523:CDS | 40.0% | |
| GTGGTGTTTCTTGAACATGA+TGG | + | chr3.2:78863801-78863820 | None:intergenic | 40.0% | |
| GTTATCAGGTTTCCGTTATC+GGG | + | chr3.2:78864673-78864692 | None:intergenic | 40.0% | |
| GTTATGCTCTTATAGACCTG+GGG | - | chr3.2:78865198-78865217 | MS.gene06523:intron | 40.0% | |
| GTTCGAACTCATATACTCCA+GGG | + | chr3.2:78863605-78863624 | None:intergenic | 40.0% | |
| TAATCATTAGGAAGAGGGCA+AGG | + | chr3.2:78866053-78866072 | None:intergenic | 40.0% | |
| TAGTGAGATCAGTGAACACA+AGG | + | chr3.2:78866200-78866219 | None:intergenic | 40.0% | |
| TCTGTTAAGCTTTGCACACT+TGG | + | chr3.2:78866645-78866664 | None:intergenic | 40.0% | |
| TGTTATTGAGATGGAACCGA+TGG | - | chr3.2:78866665-78866684 | MS.gene06523:CDS | 40.0% | |
| TGTTCCGACTTTACTTACTC+CGG | - | chr3.2:78863643-78863662 | MS.gene06523:CDS | 40.0% | |
| TTCTTTATTGGAGGTTGGCA+TGG | - | chr3.2:78866953-78866972 | MS.gene06523:CDS | 40.0% | |
| TTGGAAGACTATTCTGCTAC+TGG | - | chr3.2:78862947-78862966 | MS.gene06523:CDS | 40.0% | |
| TTTCGAGACACAAAACACCT+GGG | - | chr3.2:78865750-78865769 | MS.gene06523:CDS | 40.0% | |
| ! | ATGATTGGTATCGAACTCGT+GGG | - | chr3.2:78866472-78866491 | MS.gene06523:CDS | 40.0% |
| ! | CTAGTGAAACCTTGTTGTGA+AGG | + | chr3.2:78866122-78866141 | None:intergenic | 40.0% |
| ! | GAAGCTATGTTTGCTGATCT+TGG | - | chr3.2:78865098-78865117 | MS.gene06523:intron | 40.0% |
| ! | GTAGTTTTCTCAGCAGTATC+TGG | - | chr3.2:78863764-78863783 | MS.gene06523:intron | 40.0% |
| ! | TATGATTGGTATCGAACTCG+TGG | - | chr3.2:78866471-78866490 | MS.gene06523:CDS | 40.0% |
| ! | TGGGAATAGTATGAGCATTG+AGG | - | chr3.2:78866491-78866510 | MS.gene06523:intron | 40.0% |
| !! | AGAGTTCTGAAAACCAGGAA+AGG | + | chr3.2:78865444-78865463 | None:intergenic | 40.0% |
| !! | AGCTATTCTAGCTTCTGTTG+TGG | - | chr3.2:78865557-78865576 | MS.gene06523:CDS | 40.0% |
| !! | AGTATGAGCATTGAGGATGA+TGG | - | chr3.2:78866498-78866517 | MS.gene06523:intron | 40.0% |
| !! | CAGAGTCTTGGTGTTGTATA+TGG | - | chr3.2:78862975-78862994 | MS.gene06523:CDS | 40.0% |
| !! | CCATAAGAGTTCTGAAAACC+AGG | + | chr3.2:78865449-78865468 | None:intergenic | 40.0% |
| !! | CCTGGTTTTCAGAACTCTTA+TGG | - | chr3.2:78865446-78865465 | MS.gene06523:intron | 40.0% |
| !! | CTAGAATGGCTTCTAGCTTT+AGG | - | chr3.2:78866138-78866157 | MS.gene06523:intron | 40.0% |
| !! | CTATTCTAGCTTCTGTTGTG+GGG | - | chr3.2:78865559-78865578 | MS.gene06523:CDS | 40.0% |
| !! | GAAGTGTTGGGATAGTTCAA+AGG | - | chr3.2:78862811-78862830 | MS.gene06523:CDS | 40.0% |
| !! | GATAACGGAAACCTGATAAC+AGG | - | chr3.2:78864673-78864692 | MS.gene06523:intron | 40.0% |
| !! | GCTATTCTAGCTTCTGTTGT+GGG | - | chr3.2:78865558-78865577 | MS.gene06523:CDS | 40.0% |
| !! | TATGTGTTGACTTTGTGTGC+AGG | - | chr3.2:78865071-78865090 | MS.gene06523:intron | 40.0% |
| !!! | ACGGAATGCTATTTTATCCG+AGG | - | chr3.2:78864435-78864454 | MS.gene06523:CDS | 40.0% |
| AAACACCTGGGAAATGCATC+AGG | - | chr3.2:78865762-78865781 | MS.gene06523:CDS | 45.0% | |
| AACGGAAACCTGATAACAGG+TGG | - | chr3.2:78864676-78864695 | MS.gene06523:intron | 45.0% | |
| AAGGGGGATAGGATTCTTAC+CGG | + | chr3.2:78863516-78863535 | None:intergenic | 45.0% | |
| AGAGCCTCTTCACGATTCTT+TGG | + | chr3.2:78864703-78864722 | None:intergenic | 45.0% | |
| AGCAAACCTCACTCGTCTTT+CGG | + | chr3.2:78866700-78866719 | None:intergenic | 45.0% | |
| AGTAGCCATGTCAGCACAAT+TGG | + | chr3.2:78864068-78864087 | None:intergenic | 45.0% | |
| ATGTGTAATCCTGAGCGTGA+GGG | + | chr3.2:78864622-78864641 | None:intergenic | 45.0% | |
| ATTAACCCTCCGAATTCCCA+GGG | + | chr3.2:78863688-78863707 | None:intergenic | 45.0% | |
| ATTCTTACCGGAAATGGCTG+GGG | + | chr3.2:78863504-78863523 | None:intergenic | 45.0% | |
| CAACATCTTGATGAACGTCG+CGG | + | chr3.2:78866404-78866423 | None:intergenic | 45.0% | |
| CACCAGTATGAAGCAAGTGA+TGG | + | chr3.2:78863991-78864010 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | - | chr3.2:78864517-78864536 | MS.gene06523:intron | 45.0% | |
| CTACTGTGCATTAGCACACT+TGG | - | chr3.2:78864083-78864102 | MS.gene06523:CDS | 45.0% | |
| GAGCCTCTTCACGATTCTTT+GGG | + | chr3.2:78864702-78864721 | None:intergenic | 45.0% | |
| GATAAGTGGATGGCTGTCTT+TGG | - | chr3.2:78864190-78864209 | MS.gene06523:CDS | 45.0% | |
| GATTCTTACCGGAAATGGCT+GGG | + | chr3.2:78863505-78863524 | None:intergenic | 45.0% | |
| GCACGTTGTTACCAACATCA+CGG | + | chr3.2:78865887-78865906 | None:intergenic | 45.0% | |
| GCAGATTGCATTCACCTTTC+TGG | - | chr3.2:78865248-78865267 | MS.gene06523:intron | 45.0% | |
| GCATACTGCTCTTCTGATTG+TGG | - | chr3.2:78863436-78863455 | MS.gene06523:CDS | 45.0% | |
| GGTTCCCCCAGTTTCTTTAT+TGG | - | chr3.2:78866941-78866960 | MS.gene06523:intron | 45.0% | |
| GTGTGTTAAGAGTCCCACAT+CGG | + | chr3.2:78864598-78864617 | None:intergenic | 45.0% | |
| GTGTTCACTGATCTCACTAC+CGG | - | chr3.2:78866201-78866220 | MS.gene06523:intron | 45.0% | |
| TATTAACCCTCCGAATTCCC+AGG | + | chr3.2:78863689-78863708 | None:intergenic | 45.0% | |
| TCATCAGCATGCTGTCTGTT+TGG | + | chr3.2:78863332-78863351 | None:intergenic | 45.0% | |
| TCATGTATGTGTGGCTATGC+AGG | - | chr3.2:78863251-78863270 | MS.gene06523:CDS | 45.0% | |
| TCCAAGCTTAGGAATTGCCA+GGG | - | chr3.2:78866161-78866180 | MS.gene06523:intron | 45.0% | |
| TCCCATCACTTGCTTCATAC+TGG | - | chr3.2:78863986-78864005 | MS.gene06523:intron | 45.0% | |
| TCCCCCAGTTTCTTTATTGG+AGG | - | chr3.2:78866944-78866963 | MS.gene06523:intron | 45.0% | |
| TGAAAGTGAGACAAGGTCTG+AGG | - | chr3.2:78866734-78866753 | MS.gene06523:CDS | 45.0% | |
| TGAACACAAGGCCTATTCCA+GGG | + | chr3.2:78866188-78866207 | None:intergenic | 45.0% | |
| TGAACTTCAGTTTAGGTCCC+TGG | - | chr3.2:78863585-78863604 | MS.gene06523:CDS | 45.0% | |
| TTGGGAAACAGCCAAGAGAT+TGG | + | chr3.2:78865629-78865648 | None:intergenic | 45.0% | |
| ! | CCCAACCACCATTTCTAAGA+TGG | + | chr3.2:78864496-78864515 | None:intergenic | 45.0% |
| ! | CTACAAGGTACCTCTCTTCA+GGG | + | chr3.2:78866326-78866345 | None:intergenic | 45.0% |
| ! | GCTGACTCTCATATCCTTGT+TGG | + | chr3.2:78866587-78866606 | None:intergenic | 45.0% |
| ! | TACAAGGTACCTCTCTTCAG+GGG | + | chr3.2:78866325-78866344 | None:intergenic | 45.0% |
| ! | TGGCTGTTTCCCAAGAGTTA+AGG | - | chr3.2:78865635-78865654 | MS.gene06523:CDS | 45.0% |
| ! | TTAAGAGTCCCACATCGGTT+AGG | + | chr3.2:78864593-78864612 | None:intergenic | 45.0% |
| ! | TTGCTCCAATTGTGCTGACA+TGG | - | chr3.2:78864060-78864079 | MS.gene06523:CDS | 45.0% |
| !! | AGAGCTGATGATAATGGGGA+AGG | - | chr3.2:78863152-78863171 | MS.gene06523:CDS | 45.0% |
| !! | CTAGCTTTAGGTCCAAGCTT+AGG | - | chr3.2:78866150-78866169 | MS.gene06523:intron | 45.0% |
| !!! | ACTAGCTTTTGCAGCCAACA+AGG | - | chr3.2:78866570-78866589 | MS.gene06523:intron | 45.0% |
| AATCCTACAGACACGCTACC+TGG | + | chr3.2:78866621-78866640 | None:intergenic | 50.0% | |
| ACAAAGCGGGAGAAATTCGC+TGG | + | chr3.2:78866231-78866250 | None:intergenic | 50.0% | |
| ACCCTGGCAATTCCTAAGCT+TGG | + | chr3.2:78866165-78866184 | None:intergenic | 50.0% | |
| ACTAGGACACGGTGATATGC+AGG | + | chr3.2:78866264-78866283 | None:intergenic | 50.0% | |
| AGCAGTGATGACCGTGATGT+TGG | - | chr3.2:78865873-78865892 | MS.gene06523:intron | 50.0% | |
| AGCTACTATGTCTCCGTTCC+AGG | - | chr3.2:78865348-78865367 | MS.gene06523:intron | 50.0% | |
| CAAAGCGGGAGAAATTCGCT+GGG | + | chr3.2:78866230-78866249 | None:intergenic | 50.0% | |
| CTAGGACACGGTGATATGCA+GGG | + | chr3.2:78866263-78866282 | None:intergenic | 50.0% | |
| CTCATGTAACCCCTGAAGAG+AGG | - | chr3.2:78866313-78866332 | MS.gene06523:CDS | 50.0% | |
| CTCTCTTCAGGGGTTACATG+AGG | + | chr3.2:78866315-78866334 | None:intergenic | 50.0% | |
| CTTACTCCGGATTATTGGGG+CGG | - | chr3.2:78863656-78863675 | MS.gene06523:CDS | 50.0% | |
| GATGTGTAATCCTGAGCGTG+AGG | + | chr3.2:78864623-78864642 | None:intergenic | 50.0% | |
| GCAAACCTCACTCGTCTTTC+GGG | + | chr3.2:78866699-78866718 | None:intergenic | 50.0% | |
| GGAACCTTAAGTGACACGTC+AGG | + | chr3.2:78866927-78866946 | None:intergenic | 50.0% | |
| GGATTCTTACCGGAAATGGC+TGG | + | chr3.2:78863506-78863525 | None:intergenic | 50.0% | |
| GTCCAAGCTTAGGAATTGCC+AGG | - | chr3.2:78866160-78866179 | MS.gene06523:intron | 50.0% | |
| GTGAACACAAGGCCTATTCC+AGG | + | chr3.2:78866189-78866208 | None:intergenic | 50.0% | |
| TCACTGACAAAGTTCCGCGA+GGG | - | chr3.2:78866009-78866028 | MS.gene06523:intron | 50.0% | |
| TCAGGGGTTACATGAGGAAC+AGG | + | chr3.2:78866309-78866328 | None:intergenic | 50.0% | |
| TCATTAGGAAGAGGGCAAGG+AGG | + | chr3.2:78866050-78866069 | None:intergenic | 50.0% | |
| TCTTTGGGCCACCTGTTATC+AGG | + | chr3.2:78864687-78864706 | None:intergenic | 50.0% | |
| TGGCCCAAAGAATCGTGAAG+AGG | - | chr3.2:78864696-78864715 | MS.gene06523:intron | 50.0% | |
| TGTATGTGTGGCTATGCAGG+TGG | - | chr3.2:78863254-78863273 | MS.gene06523:CDS | 50.0% | |
| TGTGTAATCCTGAGCGTGAG+GGG | + | chr3.2:78864621-78864640 | None:intergenic | 50.0% | |
| TTAACCCTCCGAATTCCCAG+GGG | + | chr3.2:78863687-78863706 | None:intergenic | 50.0% | |
| TTCACTGACAAAGTTCCGCG+AGG | - | chr3.2:78866008-78866027 | MS.gene06523:intron | 50.0% | |
| ! | AACAGCCAAGAGATTGGCTC+TGG | + | chr3.2:78865623-78865642 | None:intergenic | 50.0% |
| ! | AGTGAGACAAGGTCTGAGGT+TGG | - | chr3.2:78866738-78866757 | MS.gene06523:CDS | 50.0% |
| ! | CCTACAAGGTACCTCTCTTC+AGG | + | chr3.2:78866327-78866346 | None:intergenic | 50.0% |
| ! | GCGTGAACATAAATGACGGG+TGG | - | chr3.2:78864647-78864666 | MS.gene06523:CDS | 50.0% |
| ! | TTGAACCTGGGAGGAAGTGT+TGG | - | chr3.2:78862798-78862817 | MS.gene06523:CDS | 50.0% |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr3.2:78864530-78864549 | None:intergenic | 50.0% |
| !! | CCTGAAGAGAGGTACCTTGT+AGG | - | chr3.2:78866324-78866343 | MS.gene06523:CDS | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr3.2:78864519-78864538 | None:intergenic | 50.0% |
| !! | CTACTGGCTTACCAGAGTCT+TGG | - | chr3.2:78862963-78862982 | MS.gene06523:CDS | 50.0% |
| !! | CTCAGCAGTATCTGGTCTTG+AGG | - | chr3.2:78863772-78863791 | MS.gene06523:intron | 50.0% |
| !! | TGAACCTGGGAGGAAGTGTT+GGG | - | chr3.2:78862799-78862818 | MS.gene06523:CDS | 50.0% |
| !! | TGAGGTTGGTGTGCAAATGC+AGG | - | chr3.2:78866752-78866771 | MS.gene06523:CDS | 50.0% |
| ACGGTGATATGCAGGGAGGT+TGG | + | chr3.2:78866256-78866275 | None:intergenic | 55.0% | |
| AGGAAGAGGGCAAGGAGGAT+TGG | + | chr3.2:78866045-78866064 | None:intergenic | 55.0% | |
| AGGCCAACTCCTAACCGATG+TGG | - | chr3.2:78864581-78864600 | MS.gene06523:intron | 55.0% | |
| AGTCAGCAAAGTGTGCAGCC+AGG | - | chr3.2:78866600-78866619 | MS.gene06523:intron | 55.0% | |
| AGTGGATGGCTGTCTTTGGG+TGG | - | chr3.2:78864194-78864213 | MS.gene06523:CDS | 55.0% | |
| ATTGCCAGGGTCCCTGGAAT+AGG | - | chr3.2:78866174-78866193 | MS.gene06523:intron | 55.0% | |
| CTATCCCAACACTTCCTCCC+AGG | + | chr3.2:78862806-78862825 | None:intergenic | 55.0% | |
| GATGAGTAGCAGGTCCTACG+CGG | + | chr3.2:78866350-78866369 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr3.2:78864539-78864558 | None:intergenic | 55.0% | |
| GGAGAAATTCGCTGGGATGC+CGG | + | chr3.2:78866223-78866242 | None:intergenic | 55.0% | |
| GGCCAACTCCTAACCGATGT+GGG | - | chr3.2:78864582-78864601 | MS.gene06523:intron | 55.0% | |
| GGGAGCCAAGCAATCATCAG+TGG | - | chr3.2:78865579-78865598 | MS.gene06523:CDS | 55.0% | |
| GTGCTTACCCCAGCCATTTC+CGG | - | chr3.2:78863494-78863513 | MS.gene06523:CDS | 55.0% | |
| GTGTAATCCTGAGCGTGAGG+GGG | + | chr3.2:78864620-78864639 | None:intergenic | 55.0% | |
| TTAGGAATTGCCAGGGTCCC+TGG | - | chr3.2:78866168-78866187 | MS.gene06523:intron | 55.0% | |
| ! | GTCCCACATCGGTTAGGAGT+TGG | + | chr3.2:78864587-78864606 | None:intergenic | 55.0% |
| ! | TGCAGAAAGCGTGAGATGGC+CGG | - | chr3.2:78865524-78865543 | MS.gene06523:intron | 55.0% |
| ! | TGGCTGCAGAAAGCGTGAGA+TGG | - | chr3.2:78865520-78865539 | MS.gene06523:intron | 55.0% |
| !! | AATGACGGGTGGCCCGATAA+CGG | - | chr3.2:78864658-78864677 | MS.gene06523:CDS | 55.0% |
| !! | AGGGAGGTTGGTGACAAAGC+GGG | + | chr3.2:78866244-78866263 | None:intergenic | 55.0% |
| !! | AGGGCCTGACGTGTCACTTA+AGG | - | chr3.2:78866920-78866939 | MS.gene06523:intron | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr3.2:78864531-78864550 | MS.gene06523:intron | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | + | chr3.2:78864531-78864550 | None:intergenic | 55.0% |
| !! | CAGGGAGGTTGGTGACAAAG+CGG | + | chr3.2:78866245-78866264 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr3.2:78864529-78864548 | None:intergenic | 55.0% |
| AAGGCCTATTCCAGGGACCC+TGG | + | chr3.2:78866181-78866200 | None:intergenic | 60.0% | |
| AGGTACCTTGTAGGCCGCGT+AGG | - | chr3.2:78866333-78866352 | MS.gene06523:CDS | 60.0% | |
| CAGCCAGGTAGCGTGTCTGT+AGG | - | chr3.2:78866615-78866634 | MS.gene06523:CDS | 60.0% | |
| CCTCCGAATTCCCAGGGGAA+GGG | + | chr3.2:78863682-78863701 | None:intergenic | 60.0% | |
| CCTTCCCCTGGGAATTCGGA+GGG | - | chr3.2:78863680-78863699 | MS.gene06523:CDS | 60.0% | |
| CTTTCGGGCGCAGCATCCAT+CGG | + | chr3.2:78866684-78866703 | None:intergenic | 60.0% | |
| GAAGGGCCGCCCCAATAATC+CGG | + | chr3.2:78863665-78863684 | None:intergenic | 60.0% | |
| GGACACGGTGATATGCAGGG+AGG | + | chr3.2:78866260-78866279 | None:intergenic | 60.0% | |
| TAACACACCCCCTCACGCTC+AGG | - | chr3.2:78864610-78864629 | MS.gene06523:intron | 60.0% | |
| ! | TTGGTAGCCAAGCACCCTCG+CGG | + | chr3.2:78866026-78866045 | None:intergenic | 60.0% |
| !! | CAAAGTTCCGCGAGGGTGCT+TGG | - | chr3.2:78866016-78866035 | MS.gene06523:intron | 60.0% |
| !! | CCCCACAAAACCGGCTTGTG+AGG | - | chr3.2:78864526-78864545 | MS.gene06523:intron | 60.0% |
| CAGGTCCTACGCGGCCTACA+AGG | + | chr3.2:78866341-78866360 | None:intergenic | 65.0% | |
| CCCTCCGAATTCCCAGGGGA+AGG | + | chr3.2:78863683-78863702 | None:intergenic | 65.0% | |
| CCCTTCCCCTGGGAATTCGG+AGG | - | chr3.2:78863679-78863698 | MS.gene06523:CDS | 65.0% | |
| CGGCCCTTCCCCTGGGAATT+CGG | - | chr3.2:78863676-78863695 | MS.gene06523:CDS | 65.0% | |
| CTGCGCCCGAAAGACGAGTG+AGG | - | chr3.2:78866691-78866710 | MS.gene06523:CDS | 65.0% | |
| ATTGGGGCGGCCCTTCCCCT+GGG | - | chr3.2:78863669-78863688 | MS.gene06523:CDS | 70.0% | |
| TATTGGGGCGGCCCTTCCCC+TGG | - | chr3.2:78863668-78863687 | MS.gene06523:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78862791 | 78866989 | 78862791 | ID=MS.gene06523 |
| chr3.2 | mRNA | 78862791 | 78866989 | 78862791 | ID=MS.gene06523.t1;Parent=MS.gene06523 |
| chr3.2 | exon | 78866948 | 78866989 | 78866948 | ID=MS.gene06523.t1.exon1;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78866948 | 78866989 | 78866948 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78866607 | 78866841 | 78866607 | ID=MS.gene06523.t1.exon2;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78866607 | 78866841 | 78866607 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78866265 | 78866507 | 78866265 | ID=MS.gene06523.t1.exon3;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78866265 | 78866507 | 78866265 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78865956 | 78866012 | 78865956 | ID=MS.gene06523.t1.exon4;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78865956 | 78866012 | 78865956 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78865544 | 78865804 | 78865544 | ID=MS.gene06523.t1.exon5;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78865544 | 78865804 | 78865544 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78864635 | 78864687 | 78864635 | ID=MS.gene06523.t1.exon6;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78864635 | 78864687 | 78864635 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78864411 | 78864528 | 78864411 | ID=MS.gene06523.t1.exon7;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78864411 | 78864528 | 78864411 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78863997 | 78864251 | 78863997 | ID=MS.gene06523.t1.exon8;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78863997 | 78864251 | 78863997 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| chr3.2 | exon | 78862791 | 78863773 | 78862791 | ID=MS.gene06523.t1.exon9;Parent=MS.gene06523.t1 |
| chr3.2 | CDS | 78862791 | 78863773 | 78862791 | ID=cds.MS.gene06523.t1;Parent=MS.gene06523.t1 |
| Gene Sequence |
| Protein sequence |