AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038517

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038517.t1 MTR_8g065030 98.918 462 4 1 1 462 1 461 0.0 936
MS.gene038517.t1 MTR_7g091850 46.739 368 193 3 64 429 75 441 2.37e-117 351
MS.gene038517.t1 MTR_1g052315 46.049 367 194 4 66 430 65 429 7.26e-116 347
MS.gene038517.t1 MTR_2g103410 45.550 382 206 2 64 443 58 439 1.55e-115 347
MS.gene038517.t1 MTR_2g060350 44.595 370 198 6 64 429 73 439 3.37e-109 330
MS.gene038517.t1 MTR_6g005630 42.674 389 214 5 54 441 34 414 1.67e-107 325
MS.gene038517.t1 MTR_3g030540 44.800 375 193 4 41 409 46 412 1.57e-103 315
MS.gene038517.t1 MTR_4g094715 40.609 394 221 6 64 446 64 455 1.85e-101 311
MS.gene038517.t1 MTR_1g086390 40.148 406 221 8 64 456 80 476 3.46e-101 311
MS.gene038517.t1 MTR_7g110050 40.731 383 213 7 64 434 66 446 2.63e-99 305
MS.gene038517.t1 MTR_7g091840 45.714 315 167 3 64 375 64 377 1.76e-96 296
MS.gene038517.t1 MTR_6g005630 40.103 389 201 7 54 441 34 391 2.11e-93 288
MS.gene038517.t1 MTR_5g034090 40.106 379 197 6 64 415 120 495 3.28e-93 292
MS.gene038517.t1 MTR_8g065010 38.257 413 221 7 53 434 95 504 1.86e-92 290
MS.gene038517.t1 MTR_2g032710 40.204 393 222 6 53 434 55 445 3.47e-91 285
MS.gene038517.t1 MTR_5g033680 33.632 446 272 6 1 436 7 438 2.05e-87 275
MS.gene038517.t1 MTR_2g103650 38.843 363 214 5 66 421 29 390 2.79e-86 270
MS.gene038517.t1 MTR_3g084380 39.943 348 194 6 69 410 25 363 7.09e-86 269
MS.gene038517.t1 MTR_7g113910 45.031 322 142 5 125 443 74 363 1.33e-85 267
MS.gene038517.t1 MTR_4g083660 40.318 377 205 11 66 434 10 374 5.98e-83 260
MS.gene038517.t1 MTR_8g009810 39.737 380 220 7 54 430 24 397 1.72e-82 260
MS.gene038517.t1 MTR_3g438050 37.401 377 223 7 64 434 26 395 3.24e-80 254
MS.gene038517.t1 MTR_4g084050 36.911 382 217 9 66 434 24 394 1.33e-78 250
MS.gene038517.t1 MTR_2g049400 38.874 373 216 10 65 434 28 391 2.74e-78 249
MS.gene038517.t1 MTR_6g028080 35.185 378 225 10 66 434 31 397 3.33e-78 249
MS.gene038517.t1 MTR_3g084360 35.359 362 220 7 66 421 25 378 7.16e-76 243
MS.gene038517.t1 MTR_2g103410 46.538 260 138 1 64 322 58 317 3.82e-75 239
MS.gene038517.t1 MTR_3g054320 35.714 378 224 7 69 440 34 398 3.94e-75 241
MS.gene038517.t1 MTR_5g043350 36.418 335 201 5 66 395 30 357 2.03e-74 239
MS.gene038517.t1 MTR_0157s0060 37.265 373 211 7 70 434 3 360 2.34e-74 238
MS.gene038517.t1 MTR_4g034020 37.265 373 211 7 70 434 3 360 2.34e-74 238
MS.gene038517.t1 MTR_2g435640 38.462 351 205 7 61 405 49 394 3.91e-74 239
MS.gene038517.t1 MTR_8g030930 33.862 378 229 8 64 429 26 394 1.94e-71 231
MS.gene038517.t1 MTR_8g010070 34.392 378 222 11 64 434 30 388 3.69e-69 225
MS.gene038517.t1 MTR_2g029170 38.551 345 193 11 97 434 29 361 8.76e-68 221
MS.gene038517.t1 MTR_4g120320 35.279 377 230 9 61 429 48 418 3.06e-67 221
MS.gene038517.t1 MTR_1g088160 35.356 379 226 10 64 431 34 404 1.14e-66 219
MS.gene038517.t1 MTR_8g010090 33.777 376 226 9 64 434 30 387 1.16e-66 219
MS.gene038517.t1 MTR_8g010040 36.193 373 215 9 66 433 33 387 2.35e-66 218
MS.gene038517.t1 MTR_8g010110 33.598 378 228 8 64 436 30 389 4.47e-66 217
MS.gene038517.t1 MTR_5g034090 39.860 286 144 4 64 322 120 404 4.59e-66 218
MS.gene038517.t1 MTR_1g012390 35.185 378 227 10 66 435 29 396 6.22e-66 217
MS.gene038517.t1 MTR_2g058640 35.328 351 214 5 63 406 23 367 4.80e-64 213
MS.gene038517.t1 MTR_2g058840 34.711 363 216 7 64 416 24 375 6.14e-64 213
MS.gene038517.t1 MTR_8g010080 32.620 374 232 7 64 434 30 386 1.18e-63 211
MS.gene038517.t1 MTR_2g058670 34.795 365 215 8 64 416 24 377 1.98e-63 211
MS.gene038517.t1 MTR_1g013740 31.414 382 232 9 61 435 31 389 1.07e-61 206
MS.gene038517.t1 MTR_8g008765 34.347 329 197 5 64 389 30 342 1.29e-60 202
MS.gene038517.t1 MTR_7g035415 39.796 294 159 6 64 351 39 320 2.68e-60 200
MS.gene038517.t1 MTR_5g063430 34.219 301 182 6 64 359 24 313 1.57e-58 195
MS.gene038517.t1 MTR_1g013730 30.670 388 237 10 54 434 18 380 4.34e-58 196
MS.gene038517.t1 MTR_5g097860 35.185 324 199 8 64 382 24 341 2.78e-55 187
MS.gene038517.t1 MTR_8g010050 30.688 378 202 12 64 434 30 354 3.79e-53 182
MS.gene038517.t1 MTR_8g077320 37.086 302 145 7 64 351 32 302 8.44e-53 182
MS.gene038517.t1 MTR_8g008700 34.201 269 159 4 123 389 13 265 4.43e-46 162
MS.gene038517.t1 MTR_8g031180 39.423 208 117 3 208 409 73 277 1.40e-41 149
MS.gene038517.t1 MTR_2g100040 30.141 355 189 10 56 404 16 317 6.55e-40 147
MS.gene038517.t1 MTR_4g124980 26.037 434 268 15 63 456 72 492 3.53e-28 117
MS.gene038517.t1 MTR_2g042740 25.056 447 282 16 47 456 42 472 6.81e-26 110
MS.gene038517.t1 MTR_7g110710 29.947 374 217 14 65 405 43 404 1.02e-24 106
MS.gene038517.t1 MTR_7g110710 29.947 374 217 14 65 405 43 404 1.18e-24 106
MS.gene038517.t1 MTR_4g120730 25.128 390 250 14 65 422 40 419 2.42e-23 102
MS.gene038517.t1 MTR_1g086030 29.532 342 204 12 65 377 82 415 1.37e-22 100
MS.gene038517.t1 MTR_1g100040 27.202 386 239 13 51 406 45 418 1.44e-21 97.4
MS.gene038517.t1 MTR_1g100060 27.062 388 237 14 51 406 82 455 1.99e-21 97.4
MS.gene038517.t1 MTR_2g435340 24.808 391 250 13 65 422 37 416 3.46e-21 96.3
MS.gene038517.t1 MTR_1g100050 27.062 388 237 14 51 406 39 412 9.68e-21 95.1
MS.gene038517.t1 MTR_3g096330 25.000 400 251 13 62 426 73 458 1.88e-20 95.1
MS.gene038517.t1 MTR_7g088550 26.287 369 230 13 70 406 55 413 3.61e-20 93.2
MS.gene038517.t1 MTR_8g098840 25.316 395 250 15 66 426 45 428 6.96e-20 92.4
MS.gene038517.t1 MTR_5g090160 25.594 379 239 11 65 411 44 411 7.95e-19 89.0
MS.gene038517.t1 MTR_1g086030 28.522 291 175 10 115 377 26 311 8.90e-19 88.6
MS.gene038517.t1 MTR_8g028725 25.240 416 262 13 65 444 55 457 1.01e-18 89.0
MS.gene038517.t1 MTR_7g078680 25.185 405 254 12 66 434 56 447 1.90e-18 88.2
MS.gene038517.t1 MTR_1g099850 26.829 369 227 13 70 406 60 417 3.61e-17 84.0
MS.gene038517.t1 MTR_2g435340 25.260 289 197 8 152 427 74 356 4.07e-17 83.2
MS.gene038517.t1 MTR_3g449590 23.810 378 246 12 65 411 47 413 3.48e-16 80.9
MS.gene038517.t1 MTR_8g007320 38.571 70 43 0 361 430 22 91 1.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038517.t1 AT1G23460 68.000 450 138 3 14 462 16 460 0.0 629
MS.gene038517.t1 AT1G23460 68.864 440 132 2 24 462 1 436 0.0 624
MS.gene038517.t1 AT1G70500 63.617 470 161 6 1 462 1 468 0.0 617
MS.gene038517.t1 AT1G80170 47.927 386 195 4 64 446 52 434 7.82e-126 373
MS.gene038517.t1 AT3G07970 46.957 345 178 4 66 408 72 413 2.08e-111 336
MS.gene038517.t1 AT3G57510 45.652 368 190 6 65 429 68 428 6.57e-109 329
MS.gene038517.t1 AT2G41850 46.467 368 187 5 65 429 68 428 3.21e-105 320
MS.gene038517.t1 AT4G01890 43.210 405 212 9 53 441 53 455 1.47e-104 319
MS.gene038517.t1 AT1G02460 41.902 389 208 8 64 436 88 474 2.97e-104 319
MS.gene038517.t1 AT1G56710 42.119 387 208 8 61 434 44 427 1.20e-102 313
MS.gene038517.t1 AT5G14650 40.399 401 225 7 57 453 43 433 5.03e-101 309
MS.gene038517.t1 AT1G48100 39.791 382 217 6 64 434 79 458 1.29e-98 304
MS.gene038517.t1 AT1G10640 39.851 404 210 7 61 434 115 515 1.89e-96 300
MS.gene038517.t1 AT3G26610 36.652 442 258 8 5 440 9 434 1.02e-91 286
MS.gene038517.t1 AT1G60590 37.717 403 215 7 66 435 124 523 2.11e-91 288
MS.gene038517.t1 AT3G15720 39.633 381 210 8 65 437 24 392 8.89e-89 278
MS.gene038517.t1 AT3G15720 39.633 381 210 8 65 437 23 391 9.22e-89 278
MS.gene038517.t1 AT3G15720 39.108 381 209 9 65 437 23 388 5.87e-86 271
MS.gene038517.t1 AT2G43890 39.084 371 216 8 66 434 30 392 9.41e-86 268
MS.gene038517.t1 AT4G35670 40.230 348 197 4 66 410 25 364 7.29e-85 266
MS.gene038517.t1 AT1G80170 48.462 260 133 1 64 322 52 311 8.95e-85 264
MS.gene038517.t1 AT2G43880 38.798 366 215 7 66 429 32 390 2.52e-83 262
MS.gene038517.t1 AT1G05660 37.067 375 225 9 64 435 27 393 5.89e-83 261
MS.gene038517.t1 AT1G05650 36.533 375 229 7 63 435 26 393 8.25e-82 258
MS.gene038517.t1 AT2G43870 40.426 376 204 12 66 434 22 384 9.97e-82 258
MS.gene038517.t1 AT1G65570 41.176 374 209 9 65 434 31 397 1.22e-81 258
MS.gene038517.t1 AT3G59850 40.214 373 211 10 66 434 24 388 3.65e-81 256
MS.gene038517.t1 AT5G27530 36.719 384 208 4 64 444 52 403 6.45e-81 258
MS.gene038517.t1 AT3G59850 40.214 373 211 10 66 434 68 432 8.13e-81 257
MS.gene038517.t1 AT1G80140 38.576 337 189 7 101 429 6 332 3.64e-78 247
MS.gene038517.t1 AT5G44840 38.462 351 204 6 64 410 23 365 5.29e-78 248
MS.gene038517.t1 AT3G15720 39.349 338 186 7 107 437 3 328 8.16e-77 245
MS.gene038517.t1 AT2G43860 38.770 374 217 10 65 434 33 398 3.06e-76 244
MS.gene038517.t1 AT1G17150 36.074 377 228 9 64 434 32 401 2.67e-73 236
MS.gene038517.t1 AT2G15450 34.465 383 232 10 64 435 30 404 1.99e-72 234
MS.gene038517.t1 AT1G78400 34.828 379 231 8 61 431 31 401 2.98e-72 234
MS.gene038517.t1 AT2G15460 34.483 377 229 9 64 429 30 399 8.11e-72 233
MS.gene038517.t1 AT2G33160 36.292 383 223 9 60 430 27 400 1.52e-71 239
MS.gene038517.t1 AT2G15470 34.204 383 233 10 64 435 30 404 8.37e-71 230
MS.gene038517.t1 AT1G43080 34.417 369 224 9 64 421 30 391 2.64e-70 229
MS.gene038517.t1 AT2G26620 34.474 380 234 8 64 435 30 402 3.87e-70 228
MS.gene038517.t1 AT5G17200 35.230 369 205 7 60 405 34 391 5.69e-70 228
MS.gene038517.t1 AT4G18180 36.901 355 212 7 64 410 38 388 8.94e-70 228
MS.gene038517.t1 AT1G43090 34.146 369 225 9 64 421 30 391 1.44e-69 228
MS.gene038517.t1 AT4G13760 33.594 384 234 11 64 435 30 404 1.34e-68 224
MS.gene038517.t1 AT1G43100 33.875 369 226 9 64 421 30 391 1.71e-68 225
MS.gene038517.t1 AT5G14650 41.573 267 151 3 57 322 43 305 5.48e-68 220
MS.gene038517.t1 AT2G43880 39.933 298 170 7 66 361 32 322 7.82e-67 217
MS.gene038517.t1 AT5G44830 37.898 314 175 5 99 410 11 306 1.46e-66 217
MS.gene038517.t1 AT1G02790 34.160 363 223 8 47 406 34 383 4.22e-66 218
MS.gene038517.t1 AT3G07840 33.684 380 243 5 66 441 22 396 7.10e-66 217
MS.gene038517.t1 AT2G40310 33.158 380 237 9 66 435 32 404 2.34e-65 216
MS.gene038517.t1 AT3G14040 35.433 381 235 8 56 431 62 436 6.82e-64 213
MS.gene038517.t1 AT4G32380 32.804 378 238 7 52 420 12 382 2.14e-63 212
MS.gene038517.t1 AT5G48140 34.302 344 214 6 78 416 34 370 1.93e-61 205
MS.gene038517.t1 AT3G07850 34.946 372 231 8 65 431 70 435 4.83e-61 206
MS.gene038517.t1 AT4G35670 39.245 265 153 2 146 410 1 257 2.13e-59 196
MS.gene038517.t1 AT3G07830 31.476 359 235 6 78 431 34 386 5.65e-59 199
MS.gene038517.t1 AT5G39910 30.239 377 199 6 64 435 35 352 1.38e-58 197
MS.gene038517.t1 AT4G32370 35.756 344 203 9 35 367 2 338 7.59e-57 192
MS.gene038517.t1 AT3G07820 31.198 359 236 6 63 416 18 370 1.61e-56 192
MS.gene038517.t1 AT4G32375 34.266 286 178 3 137 419 3 281 3.80e-54 187
MS.gene038517.t1 AT4G32380 34.395 314 192 7 52 360 12 316 5.61e-47 167
MS.gene038517.t1 AT3G62110 30.836 347 194 14 65 377 43 377 1.04e-26 112
MS.gene038517.t1 AT3G62110 30.836 347 194 14 65 377 43 377 1.04e-26 112
MS.gene038517.t1 AT2G23900 25.575 391 243 13 67 421 58 436 9.30e-25 107
MS.gene038517.t1 AT3G42950 25.000 428 267 16 63 454 64 473 5.35e-23 102
MS.gene038517.t1 AT5G41870 28.158 380 218 14 64 405 44 406 4.40e-22 99.0
MS.gene038517.t1 AT1G19170 24.048 420 268 14 45 429 72 475 6.58e-22 98.6
MS.gene038517.t1 AT4G23820 27.436 390 238 15 65 421 41 418 6.63e-22 98.2
MS.gene038517.t1 AT3G48950 24.932 369 233 10 70 405 50 407 1.59e-21 97.4
MS.gene038517.t1 AT5G49215 24.747 396 257 12 44 409 22 406 5.72e-21 95.5
MS.gene038517.t1 AT5G49215 24.747 396 257 12 44 409 24 408 7.58e-21 95.1
MS.gene038517.t1 AT4G33440 25.700 393 251 12 62 423 69 451 2.81e-20 93.6
MS.gene038517.t1 AT4G23500 25.558 403 255 13 66 434 69 460 4.66e-20 93.2
MS.gene038517.t1 AT3G06770 25.737 373 230 12 65 403 44 403 4.09e-19 90.1
MS.gene038517.t1 AT3G06770 26.005 373 229 13 65 403 43 402 4.14e-19 89.7
MS.gene038517.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene038517.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene038517.t1 AT3G61490 23.919 393 258 13 66 426 46 429 1.88e-16 82.0
MS.gene038517.t1 AT3G61490 24.324 370 241 12 66 405 61 421 1.93e-16 82.0
MS.gene038517.t1 AT3G16850 22.762 391 256 12 65 422 40 417 3.45e-16 80.9
MS.gene038517.t1 AT3G61490 24.324 370 241 12 66 405 159 519 3.68e-16 81.3
MS.gene038517.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.37e-15 77.8
MS.gene038517.t1 AT3G06770 24.601 313 195 9 122 403 31 333 2.37e-15 77.8
MS.gene038517.t1 AT3G06770 24.585 301 186 9 134 403 25 315 1.07e-13 72.8

Find 94 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCATCTGTTGGCTATTC+TGG 0.169467 8.4:-36731934 None:intergenic
GGAACCAATAGAACAGATTT+TGG 0.206049 8.4:-36731323 None:intergenic
AGCCAAACGCGTGGAAGTTT+TGG 0.227777 8.4:-36731542 None:intergenic
TGCCATTCAGCTCAAGGATT+TGG 0.250772 8.4:+36734050 MS.gene038517:CDS
TTGTAGTCCCACTTACATTT+TGG 0.252854 8.4:-36733920 None:intergenic
TGTAGTCACGAAAGTGATTT+TGG 0.253475 8.4:+36733067 MS.gene038517:CDS
GTCACTGCAGTCAAATTTAA+TGG 0.268057 8.4:-36733955 None:intergenic
ACAAGGTAACGGCGTCCTTT+TGG 0.293118 8.4:-36731344 None:intergenic
ATAGTGGCGAATGGAGTTTC+AGG 0.295850 8.4:+36730950 MS.gene038517:CDS
AAATATGGACAGATTCTTCT+TGG 0.303466 8.4:+36730907 None:intergenic
GTTAATGCAACGAAATTCAT+AGG 0.304534 8.4:+36731365 MS.gene038517:CDS
AGTTCATCTATAAAGGTTAA+AGG 0.314242 8.4:+36731902 MS.gene038517:CDS
ATTGTCCAAGACTGCAAAAT+TGG 0.318689 8.4:+36732064 MS.gene038517:CDS
TACACCAAAATCTGTTCTAT+TGG 0.328917 8.4:+36731319 MS.gene038517:CDS
AGTCCTTAGCAATGTTGATT+TGG 0.335788 8.4:+36733998 MS.gene038517:CDS
TTCTTTCCAGTCATCAGCTC+TGG 0.359397 8.4:+36733878 MS.gene038517:intron
GTGGACCGGGACATGGAATC+AGG 0.364502 8.4:+36732501 MS.gene038517:CDS
TCAGCTCAAGGATTTGGATA+TGG 0.367389 8.4:+36734056 MS.gene038517:CDS
CGATACAAGTTCATCTATAA+AGG 0.367696 8.4:+36731895 MS.gene038517:CDS
TCCCAGTTCTTAGGATCTTC+CGG 0.369647 8.4:-36731518 None:intergenic
GGAGGTGCTGGATATGTTAA+AGG 0.370065 8.4:+36733604 MS.gene038517:CDS
AACTTTCTGACATACCTTCA+TGG 0.370106 8.4:+36731053 MS.gene038517:CDS
ATCCAAAACTTCCACGCGTT+TGG 0.373107 8.4:+36731540 MS.gene038517:CDS
TTTGCATTTCTCCAGATTGA+TGG 0.378623 8.4:+36731482 MS.gene038517:intron
AGCTTTGGTGCTGCAGGAAA+TGG 0.388430 8.4:+36731115 MS.gene038517:CDS
ATATGAATTCCATCAGTGTT+TGG 0.389036 8.4:-36732022 None:intergenic
TTTACTCGGTTTGCTTATAG+TGG 0.390214 8.4:+36730934 MS.gene038517:CDS
TAAAATTGATCTATAAGAAT+GGG 0.393440 8.4:-36733667 None:intergenic
CTCCGGAAGATCCTAAGAAC+TGG 0.407663 8.4:+36731516 MS.gene038517:CDS
TTCTTCTTGGTCTCTTTACT+CGG 0.414283 8.4:+36730920 MS.gene038517:CDS
CAAGGCTCTGGAGTTATTGA+CGG 0.420399 8.4:+36731596 MS.gene038517:CDS
TTGGATACAGCACTTCTAAA+GGG 0.432719 8.4:+36733086 MS.gene038517:CDS
TTGACGGCTCAGGAAGTAAA+TGG 0.432957 8.4:+36731612 MS.gene038517:CDS
CTTGGTAAAGATAACTCAAC+TGG 0.447181 8.4:+36733044 MS.gene038517:CDS
TTTGGATACAGCACTTCTAA+AGG 0.453983 8.4:+36733085 MS.gene038517:CDS
CTTGTGAATATAGATAGCTT+TGG 0.454173 8.4:+36731100 MS.gene038517:CDS
GTAAAATTGATCTATAAGAA+TGG 0.463416 8.4:-36733668 None:intergenic
TCAGTGTTTGGACTGTCTCC+TGG 0.464955 8.4:-36732010 None:intergenic
CAAGACTGCAAAATTGGAAC+AGG 0.468126 8.4:+36732070 MS.gene038517:CDS
ATAGATAGCTTTGGTGCTGC+AGG 0.470470 8.4:+36731109 MS.gene038517:CDS
TGATGGAACACTGGTTGCTC+CGG 0.475544 8.4:+36731499 MS.gene038517:CDS
GAAGCAATTTAACTATAGTT+CGG 0.478462 8.4:-36734183 None:intergenic
ACCGTTGGTGCACCTTTGCA+AGG 0.479936 8.4:-36731773 None:intergenic
TCTGTTCTATTGGTTCCAAA+AGG 0.493777 8.4:+36731329 MS.gene038517:CDS
TAACTATAGTTCGGTGTGAC+GGG 0.494328 8.4:-36734174 None:intergenic
GAGGTGCTGGATATGTTAAA+GGG 0.497893 8.4:+36733605 MS.gene038517:CDS
TATAGATGAACTTGTATCGA+TGG 0.501752 8.4:-36731891 None:intergenic
ATCCAAATCCTTGAGCTGAA+TGG 0.502123 8.4:-36734052 None:intergenic
ATGATTAGATTGTCTTTACA+AGG 0.505103 8.4:-36731389 None:intergenic
AGTCTTAATTCTAAGACCAT+TGG 0.510878 8.4:-36733114 None:intergenic
ATGATGTGCGACAACAACTT+TGG 0.511955 8.4:+36730977 MS.gene038517:CDS
GGAGTTAAAGTGGCTTCACC+AGG 0.522566 8.4:+36731992 MS.gene038517:CDS
CCGCGTTCGCTTGTCCATGA+AGG 0.523462 8.4:-36731067 None:intergenic
ACATATTGCCATTCAGCTCA+AGG 0.523769 8.4:+36734044 MS.gene038517:CDS
TAAAGACAATCTAATCATCC+AGG 0.530090 8.4:+36731394 MS.gene038517:CDS
CATGACATGTAGGGAGGTGC+TGG 0.531306 8.4:+36733592 MS.gene038517:intron
TTAATGCAACGAAATTCATA+GGG 0.535160 8.4:+36731366 MS.gene038517:CDS
TTAACTATAGTTCGGTGTGA+CGG 0.537996 8.4:-36734175 None:intergenic
TCTTAGAATTAAGACTTGGC+AGG 0.540406 8.4:+36733121 MS.gene038517:CDS
TCTCCAAATCAACATTGCTA+AGG 0.541315 8.4:-36734001 None:intergenic
GTTGATTTGGAGAAACAAGA+TGG 0.543075 8.4:+36734011 MS.gene038517:CDS
ATATCGTAAAATGCATCTGT+TGG 0.547197 8.4:-36731943 None:intergenic
GAATTAAGGCATTCAGCTGA+AGG 0.547826 8.4:-36734089 None:intergenic
ATAATGTACCAAAATGTAAG+TGG 0.551720 8.4:+36733912 MS.gene038517:CDS
TGAATTTCGTTGCATTAACA+AGG 0.555793 8.4:-36731361 None:intergenic
CGTCAATAACTCCAGAGCCT+TGG 0.555802 8.4:-36731595 None:intergenic
TCTCCAGATTGATGGAACAC+TGG 0.557615 8.4:+36731490 MS.gene038517:intron
TGACACAGAGGAAGATTATG+AGG 0.559293 8.4:+36731024 MS.gene038517:CDS
CTTCTAAAGGGGACTACCAA+TGG 0.563594 8.4:+36733098 MS.gene038517:CDS
TCTGGAGTTATTGACGGCTC+AGG 0.564729 8.4:+36731602 MS.gene038517:CDS
TGGATACAGCACTTCTAAAG+GGG 0.580220 8.4:+36733087 MS.gene038517:CDS
TCGTTGCATTAACAAGGTAA+CGG 0.584606 8.4:-36731355 None:intergenic
CATAATCTTCCTCTGTGTCA+AGG 0.592302 8.4:-36731021 None:intergenic
GGTTTGCTTATAGTGGCGAA+TGG 0.593921 8.4:+36730941 MS.gene038517:CDS
TGATACCTGATTCCATGTCC+CGG 0.596840 8.4:-36732506 None:intergenic
GCCTTGCAAAGGTGCACCAA+CGG 0.604733 8.4:+36731772 MS.gene038517:intron
TCCGGAAGATCCTAAGAACT+GGG 0.607519 8.4:+36731517 MS.gene038517:CDS
TGGGACTACAAATAGTGCTA+AGG 0.607906 8.4:+36733932 MS.gene038517:CDS
GGAGACAGTCCAAACACTGA+TGG 0.616282 8.4:+36732013 MS.gene038517:CDS
CTAAGGACTAAGTTGCTGCA+TGG 0.619838 8.4:-36733984 None:intergenic
AAAATTGATCTATAAGAATG+GGG 0.621737 8.4:-36733666 None:intergenic
CGGCTCAGGAAGTAAATGGT+GGG 0.625021 8.4:+36731616 MS.gene038517:CDS
ATGGTCTTAGAATTAAGACT+TGG 0.628616 8.4:+36733117 MS.gene038517:CDS
GGGTACGCTTTCAGAATGTG+AGG 0.631944 8.4:+36733626 MS.gene038517:CDS
ACGGCTCAGGAAGTAAATGG+TGG 0.633961 8.4:+36731615 MS.gene038517:CDS
CCTTCATGGACAAGCGAACG+CGG 0.635643 8.4:+36731067 MS.gene038517:CDS
TAATGTACCAAAATGTAAGT+GGG 0.636159 8.4:+36733913 MS.gene038517:CDS
TCCAACCTCATGTCAAAACC+AGG 0.643988 8.4:+36733699 MS.gene038517:CDS
TGGAGAAACTGATGATACTG+AGG 0.647771 8.4:+36731135 MS.gene038517:CDS
ACGCTTTCAGAATGTGAGGG+TGG 0.678654 8.4:+36733630 MS.gene038517:CDS
ACTCAACAACCTTGACACAG+AGG 0.681814 8.4:+36731012 MS.gene038517:CDS
GGTACGCTTTCAGAATGTGA+GGG 0.685332 8.4:+36733627 MS.gene038517:CDS
AGGTGCTGGATATGTTAAAG+GGG 0.703846 8.4:+36733606 MS.gene038517:CDS
TCATGGACAAGCGAACGCGG+CGG 0.737434 8.4:+36731070 MS.gene038517:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATATCACATTTAAT+TGG + chr8.4:36733468-36733487 MS.gene038517:intron 10.0%
!!! TCATTTAAAATCATATAAAA+TGG + chr8.4:36732376-36732395 MS.gene038517:intron 10.0%
!! AATCAAATCAAATATATTCA+GGG + chr8.4:36732792-36732811 MS.gene038517:intron 15.0%
!! TAAAATATAGAATACAACAA+TGG - chr8.4:36731817-36731836 None:intergenic 15.0%
!! TAAAATTGATCTATAAGAAT+GGG - chr8.4:36733670-36733689 None:intergenic 15.0%
!! TAATCAAATCAAATATATTC+AGG + chr8.4:36732791-36732810 MS.gene038517:intron 15.0%
!!! GTAAAAATTTTCAGAATTTT+TGG + chr8.4:36731668-36731687 MS.gene038517:intron 15.0%
!! AAAACGAATTTATATTGTAC+TGG + chr8.4:36732957-36732976 MS.gene038517:intron 20.0%
!! AAAATTGATCTATAAGAATG+GGG - chr8.4:36733669-36733688 None:intergenic 20.0%
!! AATAACTACTTTACCTAATA+TGG - chr8.4:36732986-36733005 None:intergenic 20.0%
!! GAATAAAGTTTATGTTAGTT+AGG - chr8.4:36733381-36733400 None:intergenic 20.0%
!! GTAAAATTGATCTATAAGAA+TGG - chr8.4:36733671-36733690 None:intergenic 20.0%
!! TACAAGTCAAATATTAATGT+AGG - chr8.4:36733846-36733865 None:intergenic 20.0%
!! TTAAAATAATGTTATGTGTG+TGG - chr8.4:36732892-36732911 None:intergenic 20.0%
!! TTTCAAACATGCATTTATTA+AGG - chr8.4:36732135-36732154 None:intergenic 20.0%
!!! AAAATGAAGAGAATTTTTTG+TGG + chr8.4:36732482-36732501 MS.gene038517:CDS 20.0%
!!! AATAACTTTTACCAAAATCA+CGG + chr8.4:36732191-36732210 MS.gene038517:intron 20.0%
!!! ACTGATCAATTCTTATTTAT+AGG + chr8.4:36731265-36731284 MS.gene038517:intron 20.0%
!!! ATTGATTTTGTACTAAATTG+AGG - chr8.4:36732545-36732564 None:intergenic 20.0%
!!! CACACATAACATTATTTTAA+TGG + chr8.4:36732892-36732911 MS.gene038517:intron 20.0%
!!! TCTTTAAAATGATACTATGT+TGG - chr8.4:36733734-36733753 None:intergenic 20.0%
!!! TTAAATTTTAGTTGCATGTT+TGG - chr8.4:36732252-36732271 None:intergenic 20.0%
!!! TTGATTTTGTACTAAATTGA+GGG - chr8.4:36732544-36732563 None:intergenic 20.0%
! AACTGTGTGTTATATTATTC+AGG + chr8.4:36732419-36732438 MS.gene038517:intron 25.0%
! ACTGTGTGTTATATTATTCA+GGG + chr8.4:36732420-36732439 MS.gene038517:intron 25.0%
! AGTTCATCTATAAAGGTTAA+AGG + chr8.4:36731902-36731921 MS.gene038517:CDS 25.0%
! ATAATGTACCAAAATGTAAG+TGG + chr8.4:36733912-36733931 MS.gene038517:CDS 25.0%
! ATGATTAGATTGTCTTTACA+AGG - chr8.4:36731392-36731411 None:intergenic 25.0%
! TAATGTACCAAAATGTAAGT+GGG + chr8.4:36733913-36733932 MS.gene038517:CDS 25.0%
! TAGTTTAACTATGAGTTTAG+TGG + chr8.4:36733423-36733442 MS.gene038517:intron 25.0%
! TCTAGAAAGAAAAAAATGGT+GGG - chr8.4:36732852-36732871 None:intergenic 25.0%
! TTAATGCAACGAAATTCATA+GGG + chr8.4:36731366-36731385 MS.gene038517:CDS 25.0%
! TTTATGTTAGTTAGGTTCAT+GGG - chr8.4:36733373-36733392 None:intergenic 25.0%
!! CTCTTCTAGAAAGAAAAAAA+TGG - chr8.4:36732856-36732875 None:intergenic 25.0%
!! GTTTAAAATTAGAGTGCTTA+TGG + chr8.4:36732584-36732603 MS.gene038517:intron 25.0%
!! TTCTAGAAAGAAAAAAATGG+TGG - chr8.4:36732853-36732872 None:intergenic 25.0%
!! TTTTGGTAAAAGTTATTCGT+TGG - chr8.4:36732188-36732207 None:intergenic 25.0%
!!! AAATGTAGTTTTAACTCTGA+AGG + chr8.4:36731847-36731866 MS.gene038517:intron 25.0%
!!! AAGTTTTATCACTGGAATTA+AGG - chr8.4:36734106-36734125 None:intergenic 25.0%
!!! AATGTAGTTTTAACTCTGAA+GGG + chr8.4:36731848-36731867 MS.gene038517:intron 25.0%
!!! ACACTAATTTTTTACAGCAT+TGG + chr8.4:36733017-36733036 MS.gene038517:intron 25.0%
AATAACGTGAGTTACATTAC+CGG + chr8.4:36733264-36733283 MS.gene038517:intron 30.0%
ATATCGTAAAATGCATCTGT+TGG - chr8.4:36731946-36731965 None:intergenic 30.0%
ATATGAATTCCATCAGTGTT+TGG - chr8.4:36732025-36732044 None:intergenic 30.0%
ATTGTACTGGAAACCATATT+AGG + chr8.4:36732970-36732989 MS.gene038517:intron 30.0%
CATCATTACAATTACTGACA+TGG + chr8.4:36731457-36731476 MS.gene038517:intron 30.0%
CATGTTGAACATAGAAAAAC+AGG - chr8.4:36731190-36731209 None:intergenic 30.0%
CGATACAAGTTCATCTATAA+AGG + chr8.4:36731895-36731914 MS.gene038517:CDS 30.0%
CGCTTACATTTCAAAACTAT+GGG + chr8.4:36733517-36733536 MS.gene038517:intron 30.0%
CTGTGTGTTATATTATTCAG+GGG + chr8.4:36732421-36732440 MS.gene038517:intron 30.0%
CTTGTGAATATAGATAGCTT+TGG + chr8.4:36731100-36731119 MS.gene038517:CDS 30.0%
GTTAATGCAACGAAATTCAT+AGG + chr8.4:36731365-36731384 MS.gene038517:CDS 30.0%
GTTTATGTTAGTTAGGTTCA+TGG - chr8.4:36733374-36733393 None:intergenic 30.0%
TAAAGACAATCTAATCATCC+AGG + chr8.4:36731394-36731413 MS.gene038517:CDS 30.0%
TACACCAAAATCTGTTCTAT+TGG + chr8.4:36731319-36731338 MS.gene038517:CDS 30.0%
TATAGATGAACTTGTATCGA+TGG - chr8.4:36731894-36731913 None:intergenic 30.0%
TCGCTTACATTTCAAAACTA+TGG + chr8.4:36733516-36733535 MS.gene038517:intron 30.0%
TGAATTTCGTTGCATTAACA+AGG - chr8.4:36731364-36731383 None:intergenic 30.0%
TTATGTTAGTTAGGTTCATG+GGG - chr8.4:36733372-36733391 None:intergenic 30.0%
TTGGAGTTTCAACAAAATTG+CGG - chr8.4:36732169-36732188 None:intergenic 30.0%
! ATGGTCTTAGAATTAAGACT+TGG + chr8.4:36733117-36733136 MS.gene038517:CDS 30.0%
! TTTCTAGAAGAGTTAGTTAC+AGG + chr8.4:36732864-36732883 MS.gene038517:intron 30.0%
!! AGTCTTAATTCTAAGACCAT+TGG - chr8.4:36733117-36733136 None:intergenic 30.0%
!! ATCTTGAGAAGTTTTATCAC+TGG - chr8.4:36734114-36734133 None:intergenic 30.0%
!! TGTTTTGTTCATGACATGTA+GGG + chr8.4:36733583-36733602 MS.gene038517:intron 30.0%
!! TTGTTTTGTTCATGACATGT+AGG + chr8.4:36733582-36733601 MS.gene038517:intron 30.0%
!!! TCGAATTTTTGGAGTTAAAG+TGG + chr8.4:36731982-36732001 MS.gene038517:CDS 30.0%
!!! TTTTTTTGTGTAACATCACC+TGG - chr8.4:36731415-36731434 None:intergenic 30.0%
AACTTTCTGACATACCTTCA+TGG + chr8.4:36731053-36731072 MS.gene038517:CDS 35.0%
AAGAAAGTTGTTCTTACCGT+TGG - chr8.4:36731791-36731810 None:intergenic 35.0%
ACATGCACTTTACACATTTG+AGG + chr8.4:36731205-36731224 MS.gene038517:intron 35.0%
ATTGTCCAAGACTGCAAAAT+TGG + chr8.4:36732064-36732083 MS.gene038517:CDS 35.0%
CTTGGTAAAGATAACTCAAC+TGG + chr8.4:36733044-36733063 MS.gene038517:CDS 35.0%
GTCACTGCAGTCAAATTTAA+TGG - chr8.4:36733958-36733977 None:intergenic 35.0%
TAACACACAGTTAGTCAATG+TGG - chr8.4:36732411-36732430 None:intergenic 35.0%
TACGTGTCTTGTGTAAACAT+AGG + chr8.4:36732916-36732935 MS.gene038517:intron 35.0%
TATAGGCTCTTCAAAAAGCA+TGG + chr8.4:36731282-36731301 MS.gene038517:intron 35.0%
TCGTTGCATTAACAAGGTAA+CGG - chr8.4:36731358-36731377 None:intergenic 35.0%
TCTCCAAATCAACATTGCTA+AGG - chr8.4:36734004-36734023 None:intergenic 35.0%
TCTTAGAATTAAGACTTGGC+AGG + chr8.4:36733121-36733140 MS.gene038517:CDS 35.0%
TTCTTCTTGGTCTCTTTACT+CGG + chr8.4:36730920-36730939 MS.gene038517:CDS 35.0%
TTGGATACAGCACTTCTAAA+GGG + chr8.4:36733086-36733105 MS.gene038517:CDS 35.0%
TTTGCATTTCTCCAGATTGA+TGG + chr8.4:36731482-36731501 MS.gene038517:intron 35.0%
TTTGGATACAGCACTTCTAA+AGG + chr8.4:36733085-36733104 MS.gene038517:CDS 35.0%
! AACTTTTACCAAAATCACGG+TGG + chr8.4:36732194-36732213 MS.gene038517:intron 35.0%
! AGTCCTTAGCAATGTTGATT+TGG + chr8.4:36733998-36734017 MS.gene038517:CDS 35.0%
! ATAGGCTCTTCAAAAAGCAT+GGG + chr8.4:36731283-36731302 MS.gene038517:intron 35.0%
! GGAACCAATAGAACAGATTT+TGG - chr8.4:36731326-36731345 None:intergenic 35.0%
! TGCGATTCTGTTCGAATTTT+TGG + chr8.4:36731971-36731990 MS.gene038517:CDS 35.0%
! TGTAGTCACGAAAGTGATTT+TGG + chr8.4:36733067-36733086 MS.gene038517:CDS 35.0%
! TTGTAGTCCCACTTACATTT+TGG - chr8.4:36733923-36733942 None:intergenic 35.0%
! TTTACTCGGTTTGCTTATAG+TGG + chr8.4:36730934-36730953 MS.gene038517:CDS 35.0%
!! GTTGATTTGGAGAAACAAGA+TGG + chr8.4:36734011-36734030 MS.gene038517:CDS 35.0%
!! TAGGGTTTTGACAGACTTTA+AGG - chr8.4:36733344-36733363 None:intergenic 35.0%
!! TCTGTTCTATTGGTTCCAAA+AGG + chr8.4:36731329-36731348 MS.gene038517:CDS 35.0%
!! TTGAAGAAAGCTGTTTTCCA+AGG + chr8.4:36731578-36731597 MS.gene038517:CDS 35.0%
!! TTTTACAGCATTGGAAGTCT+TGG + chr8.4:36733026-36733045 MS.gene038517:intron 35.0%
!!! AAGAGAATTTTTTGTGGACC+GGG + chr8.4:36732488-36732507 MS.gene038517:CDS 35.0%
!!! GAAGAGAATTTTTTGTGGAC+CGG + chr8.4:36732487-36732506 MS.gene038517:CDS 35.0%
ACATATTGCCATTCAGCTCA+AGG + chr8.4:36734044-36734063 MS.gene038517:CDS 40.0%
AGACACACAAGTTTCATGAG+TGG - chr8.4:36732637-36732656 None:intergenic 40.0%
ATCCAAATCCTTGAGCTGAA+TGG - chr8.4:36734055-36734074 None:intergenic 40.0%
ATGATGTGCGACAACAACTT+TGG + chr8.4:36730977-36730996 MS.gene038517:CDS 40.0%
ATGTAACTCACGTTATTGCG+AGG - chr8.4:36733261-36733280 None:intergenic 40.0%
CAAGACTGCAAAATTGGAAC+AGG + chr8.4:36732070-36732089 MS.gene038517:CDS 40.0%
CATAATCTTCCTCTGTGTCA+AGG - chr8.4:36731024-36731043 None:intergenic 40.0%
CATCAAAGAAATCCTCACAC+CGG - chr8.4:36733286-36733305 None:intergenic 40.0%
GCATCAACTTCATGTGAGTT+TGG - chr8.4:36732818-36732837 None:intergenic 40.0%
TCAGCTCAAGGATTTGGATA+TGG + chr8.4:36734056-36734075 MS.gene038517:CDS 40.0%
TGACACAGAGGAAGATTATG+AGG + chr8.4:36731024-36731043 MS.gene038517:CDS 40.0%
TGGAGAAACTGATGATACTG+AGG + chr8.4:36731135-36731154 MS.gene038517:CDS 40.0%
TGGGACTACAAATAGTGCTA+AGG + chr8.4:36733932-36733951 MS.gene038517:CDS 40.0%
TTTGCAAGGCTGTGAGAAAA+AGG - chr8.4:36731762-36731781 None:intergenic 40.0%
TTTGTTCATGACATGTAGGG+AGG + chr8.4:36733586-36733605 MS.gene038517:intron 40.0%
! AATGCATCTGTTGGCTATTC+TGG - chr8.4:36731937-36731956 None:intergenic 40.0%
! CTGTTCCAATTTTGCAGTCT+TGG - chr8.4:36732072-36732091 None:intergenic 40.0%
! GAATTAAGGCATTCAGCTGA+AGG - chr8.4:36734092-36734111 None:intergenic 40.0%
! TAGGCTCTTCAAAAAGCATG+GGG + chr8.4:36731284-36731303 MS.gene038517:intron 40.0%
! TGGATACAGCACTTCTAAAG+GGG + chr8.4:36733087-36733106 MS.gene038517:CDS 40.0%
! TTTTTCTCACAGCCTTGCAA+AGG + chr8.4:36731761-36731780 MS.gene038517:intron 40.0%
!! AGGTGCTGGATATGTTAAAG+GGG + chr8.4:36733606-36733625 MS.gene038517:CDS 40.0%
!! GAGGTGCTGGATATGTTAAA+GGG + chr8.4:36733605-36733624 MS.gene038517:CDS 40.0%
!!! AGTTTTGGATCCCAGTTCTT+AGG - chr8.4:36731530-36731549 None:intergenic 40.0%
!!! CTATGTTGGTTTTGAGTACC+TGG - chr8.4:36733720-36733739 None:intergenic 40.0%
ACTCAACAACCTTGACACAG+AGG + chr8.4:36731012-36731031 MS.gene038517:CDS 45.0%
ATAGTGGCGAATGGAGTTTC+AGG + chr8.4:36730950-36730969 MS.gene038517:CDS 45.0%
ATCCAAAACTTCCACGCGTT+TGG + chr8.4:36731540-36731559 MS.gene038517:CDS 45.0%
CAACATGTCTATGAGTCGTG+TGG + chr8.4:36732108-36732127 MS.gene038517:intron 45.0%
CAACCAGTGTTCCATCAATC+TGG - chr8.4:36731496-36731515 None:intergenic 45.0%
CGGTGTGAGGATTTCTTTGA+TGG + chr8.4:36733284-36733303 MS.gene038517:intron 45.0%
CTAAGGACTAAGTTGCTGCA+TGG - chr8.4:36733987-36734006 None:intergenic 45.0%
GGTACGCTTTCAGAATGTGA+GGG + chr8.4:36733627-36733646 MS.gene038517:CDS 45.0%
TAGGTTCATGGGGTTCACTA+GGG - chr8.4:36733362-36733381 None:intergenic 45.0%
TCCAACCTCATGTCAAAACC+AGG + chr8.4:36733699-36733718 MS.gene038517:CDS 45.0%
TCCCAGTTCTTAGGATCTTC+CGG - chr8.4:36731521-36731540 None:intergenic 45.0%
TCCGGAAGATCCTAAGAACT+GGG + chr8.4:36731517-36731536 MS.gene038517:CDS 45.0%
TCTCCAGATTGATGGAACAC+TGG + chr8.4:36731490-36731509 MS.gene038517:intron 45.0%
TGAGTTACATTACCGGTGTG+AGG + chr8.4:36733271-36733290 MS.gene038517:intron 45.0%
TGATACCTGATTCCATGTCC+CGG - chr8.4:36732509-36732528 None:intergenic 45.0%
TGCCATTCAGCTCAAGGATT+TGG + chr8.4:36734050-36734069 MS.gene038517:CDS 45.0%
TTAGGTTCATGGGGTTCACT+AGG - chr8.4:36733363-36733382 None:intergenic 45.0%
TTATCTCCAGAGCTGATGAC+TGG - chr8.4:36733887-36733906 None:intergenic 45.0%
TTCTTTCCAGTCATCAGCTC+TGG + chr8.4:36733878-36733897 MS.gene038517:intron 45.0%
TTGACGGCTCAGGAAGTAAA+TGG + chr8.4:36731612-36731631 MS.gene038517:CDS 45.0%
! ACAGTATGCCACCGTGATTT+TGG - chr8.4:36732205-36732224 None:intergenic 45.0%
! CTTCTAAAGGGGACTACCAA+TGG + chr8.4:36733098-36733117 MS.gene038517:CDS 45.0%
! GGTTTGCTTATAGTGGCGAA+TGG + chr8.4:36730941-36730960 MS.gene038517:CDS 45.0%
!! AAAGCTGTTTTCCAAGGCTC+TGG + chr8.4:36731584-36731603 MS.gene038517:CDS 45.0%
!! ATAGATAGCTTTGGTGCTGC+AGG + chr8.4:36731109-36731128 MS.gene038517:CDS 45.0%
!! CAAGGCTCTGGAGTTATTGA+CGG + chr8.4:36731596-36731615 MS.gene038517:CDS 45.0%
!! CTCACATGAAGTTGATGCCA+CGG + chr8.4:36732820-36732839 MS.gene038517:intron 45.0%
!! GGAGGTGCTGGATATGTTAA+AGG + chr8.4:36733604-36733623 MS.gene038517:CDS 45.0%
!!! ACCTGGTTTTGACATGAGGT+TGG - chr8.4:36733703-36733722 None:intergenic 45.0%
!!! ATTTTTTGTGGACCGGGACA+TGG + chr8.4:36732494-36732513 MS.gene038517:CDS 45.0%
!!! GAGTACCTGGTTTTGACATG+AGG - chr8.4:36733707-36733726 None:intergenic 45.0%
ACGCTTTCAGAATGTGAGGG+TGG + chr8.4:36733630-36733649 MS.gene038517:CDS 50.0%
ACGGCTCAGGAAGTAAATGG+TGG + chr8.4:36731615-36731634 MS.gene038517:CDS 50.0%
CGGCTCAGGAAGTAAATGGT+GGG + chr8.4:36731616-36731635 MS.gene038517:CDS 50.0%
CGTCAATAACTCCAGAGCCT+TGG - chr8.4:36731598-36731617 None:intergenic 50.0%
CTCCGGAAGATCCTAAGAAC+TGG + chr8.4:36731516-36731535 MS.gene038517:CDS 50.0%
GAAAAATCGAGCCAAACGCG+TGG - chr8.4:36731554-36731573 None:intergenic 50.0%
GGAGACAGTCCAAACACTGA+TGG + chr8.4:36732013-36732032 MS.gene038517:CDS 50.0%
GGAGTTAAAGTGGCTTCACC+AGG + chr8.4:36731992-36732011 MS.gene038517:CDS 50.0%
GGGTACGCTTTCAGAATGTG+AGG + chr8.4:36733626-36733645 MS.gene038517:CDS 50.0%
TCAGTGTTTGGACTGTCTCC+TGG - chr8.4:36732013-36732032 None:intergenic 50.0%
TCTGAAGGGTGATTCATCGC+AGG + chr8.4:36731862-36731881 MS.gene038517:intron 50.0%
! AAAATGGTGGGAACCAACCG+TGG - chr8.4:36732840-36732859 None:intergenic 50.0%
! AGCCAAACGCGTGGAAGTTT+TGG - chr8.4:36731545-36731564 None:intergenic 50.0%
! TCTGGAGTTATTGACGGCTC+AGG + chr8.4:36731602-36731621 MS.gene038517:CDS 50.0%
! TGATGGAACACTGGTTGCTC+CGG + chr8.4:36731499-36731518 MS.gene038517:CDS 50.0%
!! ACAAGGTAACGGCGTCCTTT+TGG - chr8.4:36731347-36731366 None:intergenic 50.0%
!! AGCTTTGGTGCTGCAGGAAA+TGG + chr8.4:36731115-36731134 MS.gene038517:CDS 50.0%
!! CATGAAGTTGATGCCACGGT+TGG + chr8.4:36732824-36732843 MS.gene038517:intron 50.0%
ACCGTTGGTGCACCTTTGCA+AGG - chr8.4:36731776-36731795 None:intergenic 55.0%
CCTTCATGGACAAGCGAACG+CGG + chr8.4:36731067-36731086 MS.gene038517:CDS 55.0%
! CATGACATGTAGGGAGGTGC+TGG + chr8.4:36733592-36733611 MS.gene038517:intron 55.0%
! GCCTTGCAAAGGTGCACCAA+CGG + chr8.4:36731772-36731791 MS.gene038517:intron 55.0%
CCGCGTTCGCTTGTCCATGA+AGG - chr8.4:36731070-36731089 None:intergenic 60.0%
GTGGACCGGGACATGGAATC+AGG + chr8.4:36732501-36732520 MS.gene038517:CDS 60.0%
TCATGGACAAGCGAACGCGG+CGG + chr8.4:36731070-36731089 MS.gene038517:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 36730911 36734193 36730911 ID=MS.gene038517
chr8.4 mRNA 36730911 36734193 36730911 ID=MS.gene038517.t1;Parent=MS.gene038517
chr8.4 exon 36730911 36731156 36730911 ID=MS.gene038517.t1.exon1;Parent=MS.gene038517.t1
chr8.4 CDS 36730911 36731156 36730911 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36731287 36731415 36731287 ID=MS.gene038517.t1.exon2;Parent=MS.gene038517.t1
chr8.4 CDS 36731287 36731415 36731287 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36731497 36731667 36731497 ID=MS.gene038517.t1.exon3;Parent=MS.gene038517.t1
chr8.4 CDS 36731497 36731667 36731497 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36731773 36731793 36731773 ID=MS.gene038517.t1.exon4;Parent=MS.gene038517.t1
chr8.4 CDS 36731773 36731793 36731773 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36731884 36732091 36731884 ID=MS.gene038517.t1.exon5;Parent=MS.gene038517.t1
chr8.4 CDS 36731884 36732091 36731884 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36732441 36732522 36732441 ID=MS.gene038517.t1.exon6;Parent=MS.gene038517.t1
chr8.4 CDS 36732441 36732522 36732441 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36733034 36733142 36733034 ID=MS.gene038517.t1.exon7;Parent=MS.gene038517.t1
chr8.4 CDS 36733034 36733142 36733034 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36733604 36733720 36733604 ID=MS.gene038517.t1.exon8;Parent=MS.gene038517.t1
chr8.4 CDS 36733604 36733720 36733604 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
chr8.4 exon 36733888 36734193 36733888 ID=MS.gene038517.t1.exon9;Parent=MS.gene038517.t1
chr8.4 CDS 36733888 36734193 36733888 ID=cds.MS.gene038517.t1;Parent=MS.gene038517.t1
Gene Sequence

>MS.gene038517

ATGGACAGATTCTTCTTGGTCTCTTTACTCGGTTTGCTTATAGTGGCGAATGGAGTTTCAGGAAGCATGATGTGCGACAACAACTTTGGCATGCTTGAAGAACTCAACAACCTTGACACAGAGGAAGATTATGAGGTAGAAGAACTTTCTGACATACCTTCATGGACAAGCGAACGCGGCGGAAAAGTTCTTGTGAATATAGATAGCTTTGGTGCTGCAGGAAATGGAGAAACTGATGATACTGAGGTAAAGTTCTTTCATAATTTGCAAATTAGTCCTGTTTTTCTATGTTCAACATGCACTTTACACATTTGAGGTTGTTGAACATATGCAACTGTTCTATTTTTTTTCTGTACTGATCAATTCTTATTTATAGGCTCTTCAAAAAGCATGGGGAGTTGCTTGTTCTACACCAAAATCTGTTCTATTGGTTCCAAAAGGACGCCGTTACCTTGTTAATGCAACGAAATTCATAGGGCCTTGTAAAGACAATCTAATCATCCAGGTGATGTTACACAAAAAAATTATTTAGTTTTATCAGCGACTCATCATTACAATTACTGACATGGTATTTGCATTTCTCCAGATTGATGGAACACTGGTTGCTCCGGAAGATCCTAAGAACTGGGATCCAAAACTTCCACGCGTTTGGCTCGATTTTTCTAAATTGAAGAAAGCTGTTTTCCAAGGCTCTGGAGTTATTGACGGCTCAGGAAGTAAATGGTGGGCAGCATCTTGCAAAAAGAACAAGACTAATGTAAAAATTTTCAGAATTTTTGGCTTTGTTATCTTACAAATATTTAAAAATAACTTATATTGCAAGCAATAATAATTTTCTGTTTTTTTTTCCTTTTTCTCACAGCCTTGCAAAGGTGCACCAACGGTAAGAACAACTTTCTTAAACCATTGTTGTATTCTATATTTTAAGCACAAAAAAAATGTAGTTTTAACTCTGAAGGGTGATTCATCGCAGGCACTAACCATCGATACAAGTTCATCTATAAAGGTTAAAGGACTGACTATCCAGAATAGCCAACAGATGCATTTTACGATATCACGATGCGATTCTGTTCGAATTTTTGGAGTTAAAGTGGCTTCACCAGGAGACAGTCCAAACACTGATGGAATTCATATTAGTGAATCAACAAATGTCATTGTCCAAGACTGCAAAATTGGAACAGGTTCTGAACTTAGAATCAACATGTCTATGAGTCGTGTGGTCCTTAATAAATGCATGTTTGAAATCACAGTTGCACCGCAATTTTGTTGAAACTCCAACGAATAACTTTTACCAAAATCACGGTGGCATACTGTGCTTATGTCAAATTTACTGTCAATCCAAACATGCAACTAAAATTTAATTATGTTGAAATTTTACATTCAAATTTTCTTTCAAAGTATAAACATATCTAAACATAATTCGCTTTATTTCGAACTCAATTATACTCAAAACAATTTATAATTTTCATTTAAAATCATATAAAATGGTCACACAAACCACATTGACTAACTGTGTGTTATATTATTCAGGGGATGATTGCATTTCAATTGTGAATGCTAGTTCAAATATCAAAATGAAGAGAATTTTTTGTGGACCGGGACATGGAATCAGGTATCATCAAATCTTCATCCCTCAATTTAGTACAAAATCAATGTTAATACTTGTTTGTTACGTTTAAAATTAGAGTGCTTATGGTTGCACAAAGATTTTCTGACACTAATGCCACTCATGAAACTTGTGTGTCTAAACGCTTTGTAAAACTATCTACTTATATTAAAAAAATACACTTATATAATAAGTGCTTTATTAAGTTGTATATACAATTAGACTAAAAGCATTCAAGCACAACTAACTTTACTTTAAAGTTTAAACTCAAATTTAATCAAATCAAATATATTCAGGGCCAAACTCACATGAAGTTGATGCCACGGTTGGTTCCCACCATTTTTTTCTTTCTAGAAGAGTTAGTTACAGGAACCACACACATAACATTATTTTAATGGTTACGTGTCTTGTGTAAACATAGGATAACAAACTCAAAGATAAAAACGAATTTATATTGTACTGGAAACCATATTAGGTAAAGTAGTTATTTTCTTTCACTAACACTAATTTTTTACAGCATTGGAAGTCTTGGTAAAGATAACTCAACTGGTGTAGTCACGAAAGTGATTTTGGATACAGCACTTCTAAAGGGGACTACCAATGGTCTTAGAATTAAGACTTGGCAGGTAGAATTTTTTATTTCTATCTTGATTAAATTTTGCTAAATATTTATTATGTAGTATTGTTAATTAATTAATTTAACAATGAAGATTGACTCAATTGATAAAGAGCTTAATCATACCTCGCAATAACGTGAGTTACATTACCGGTGTGAGGATTTCTTTGATGGAGAATTTGTAAATACTTTGTTAGCGTTCTCTGAGCCTTAAAGTCTGTCAAAACCCTAGTGAACCCCATGAACCTAACTAACATAAACTTTATTCTATAAAAAACAATATCATTAATTAGTTTAACTATGAGTTTAGTGGATATACACATAGAGTGAAAAATAAAATTATATCACATTTAATTGGACATTTTATAATTTTAGAATTATTTTCGCTTACATTTCAAAACTATGGGAATTGATTATTTGAAAATGACAAGCAATGCTTTCTCTCTATCTTGTTTTGTTCATGACATGTAGGGAGGTGCTGGATATGTTAAAGGGGTACGCTTTCAGAATGTGAGGGTGGAAAATGTATCAAACCCCATTCTTATAGATCAATTTTACTGTGATTCTCCAACCTCATGTCAAAACCAGGTACTCAAAACCAACATAGTATCATTTTAAAGATTTCAGTTCTTTAATGTTTCATTTTATTTTACTGATGTTTAAATTATTATTATATACACATAATTGTGTTTTTGATGTGTGATAATTATCCTACATTAATATTTGACTTGTATGATATTTTTTTTTCTTTCCAGTCATCAGCTCTGGAGATAAGTGAGATAATGTACCAAAATGTAAGTGGGACTACAAATAGTGCTAAGGCCATTAAATTTGACTGCAGTGACACTGTTCCATGCAGCAACTTAGTCCTTAGCAATGTTGATTTGGAGAAACAAGATGGCACAGTTGAAACATATTGCCATTCAGCTCAAGGATTTGGATATGGTGTTGTTCATCCTTCAGCTGAATGCCTTAATTCCAGTGATAAAACTTCTCAAGATGATGAATCTCAATCTATTATTTCTGAAGATGATGATTATACCCGTCACACCGAACTATAG
Protein sequence

>MS.gene038517.t1

MDRFFLVSLLGLLIVANGVSGSMMCDNNFGMLEELNNLDTEEDYEVEELSDIPSWTSERGGKVLVNIDSFGAAGNGETDDTEALQKAWGVACSTPKSVLLVPKGRRYLVNATKFIGPCKDNLIIQIDGTLVAPEDPKNWDPKLPRVWLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRIFGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTALLKGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQDGTVETYCHSAQGFGYGVVHPSAECLNSSDKTSQDDESQSIISEDDDYTRHTEL