Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040150.t1 | XP_003631072.1 | 97.9 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.00E+00 | 1283.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040150.t1 | Q9C9U3 | 70.5 | 623 | 183 | 1 | 7 | 629 | 7 | 628 | 9.0e-278 | 957.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040150.t1 | G7LD99 | 97.9 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.0e+00 | 1283.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040150 | MS.gene20639 | PPI |
| MS.gene040150 | MS.gene54669 | PPI |
| MS.gene040150 | MS.gene57088 | PPI |
| MS.gene040150 | MS.gene20637 | PPI |
| MS.gene040150 | MS.gene54667 | PPI |
| MS.gene57085 | MS.gene040150 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040150.t1 | MTR_8g106800 | 97.933 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1290 |
| MS.gene040150.t1 | MTR_6g007767 | 62.600 | 623 | 226 | 2 | 11 | 629 | 21 | 640 | 0.0 | 831 |
| MS.gene040150.t1 | MTR_6g007770 | 65.174 | 603 | 203 | 2 | 31 | 629 | 19 | 618 | 0.0 | 824 |
| MS.gene040150.t1 | MTR_6g007763 | 63.242 | 623 | 225 | 3 | 11 | 629 | 19 | 641 | 0.0 | 813 |
| MS.gene040150.t1 | MTR_6g007767 | 66.468 | 504 | 169 | 0 | 126 | 629 | 2 | 505 | 0.0 | 729 |
| MS.gene040150.t1 | MTR_6g007767 | 62.319 | 552 | 201 | 2 | 11 | 558 | 21 | 569 | 0.0 | 727 |
| MS.gene040150.t1 | MTR_6g007767 | 59.553 | 403 | 156 | 2 | 11 | 409 | 21 | 420 | 3.58e-172 | 496 |
| MS.gene040150.t1 | MTR_6g007767 | 59.406 | 404 | 157 | 2 | 11 | 410 | 21 | 421 | 9.37e-172 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040150.t1 | AT1G73680 | 70.111 | 629 | 187 | 1 | 1 | 629 | 1 | 628 | 0.0 | 961 |
| MS.gene040150.t1 | AT1G73680 | 68.339 | 638 | 192 | 2 | 1 | 629 | 1 | 637 | 0.0 | 938 |
| MS.gene040150.t1 | AT1G73680 | 72.500 | 520 | 142 | 1 | 110 | 629 | 1 | 519 | 0.0 | 821 |
| MS.gene040150.t1 | AT3G01420 | 63.344 | 622 | 226 | 2 | 10 | 629 | 15 | 636 | 0.0 | 815 |
| MS.gene040150.t1 | AT1G73680 | 72.211 | 475 | 131 | 1 | 155 | 629 | 1 | 474 | 0.0 | 743 |
Find 153 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCATTTGGAAATATTT+TGG | 0.100271 | 4.4:-597592 | MS.gene040150:CDS |
| AAATCTTCCCACTTACTAAT+TGG | 0.152032 | 4.4:+596882 | None:intergenic |
| TATAGAGGTATGTATTTCTT+AGG | 0.222425 | 4.4:+596429 | None:intergenic |
| CCTCCGACGACTTTAAATTA+TGG | 0.229905 | 4.4:-599227 | MS.gene040150:CDS |
| TCCCTGAGATGACTGAAAAT+TGG | 0.233453 | 4.4:-596497 | MS.gene040150:CDS |
| GGGCAATATACTTGGGAATT+AGG | 0.236418 | 4.4:-599409 | MS.gene040150:CDS |
| GGTATCAAAGAGGGTCATTT+TGG | 0.261310 | 4.4:+599624 | None:intergenic |
| CATAAGCTTCCAGTGTTGTT+GGG | 0.270454 | 4.4:-599431 | MS.gene040150:CDS |
| CATTTGTCTTCTCCTGTTGT+AGG | 0.275032 | 4.4:+597432 | None:intergenic |
| AAGAGTTCACGAGTGTTTAT+AGG | 0.276589 | 4.4:-597500 | MS.gene040150:CDS |
| TTTCCTATCATTTCTGTCAT+TGG | 0.278143 | 4.4:+597236 | None:intergenic |
| TTTCTTTATCTTTGTGATCA+TGG | 0.279891 | 4.4:-596733 | MS.gene040150:CDS |
| ACCAAGGAGTCCTAATGTTT+TGG | 0.297547 | 4.4:+598552 | None:intergenic |
| GGTATGTATTTCTTAGGATT+TGG | 0.300998 | 4.4:+596435 | None:intergenic |
| CATGTGGTGCTGTTACTTTA+TGG | 0.301909 | 4.4:-597148 | MS.gene040150:CDS |
| AAGAAATTCAAAGATTCATT+TGG | 0.309732 | 4.4:-597603 | MS.gene040150:CDS |
| ACCTTCGTTTGTGTATGTTT+TGG | 0.313730 | 4.4:+596572 | None:intergenic |
| GGCTCTTCACACATGAAGTT+TGG | 0.314198 | 4.4:-598578 | MS.gene040150:CDS |
| AGGGATGGAAGTGTGATATA+TGG | 0.316910 | 4.4:-598192 | MS.gene040150:CDS |
| AAGTCGTCGGAGGCATATTC+CGG | 0.320238 | 4.4:+599237 | None:intergenic |
| CGATCACTTGATCGGTAGTC+AGG | 0.325900 | 4.4:-599273 | MS.gene040150:CDS |
| CTCCGACGACTTTAAATTAT+GGG | 0.335283 | 4.4:-599226 | MS.gene040150:CDS |
| TCAACATGATAGCTTGTTCA+TGG | 0.341489 | 4.4:-599039 | MS.gene040150:CDS |
| TCCAGTTGACATGGCTACTA+TGG | 0.351321 | 4.4:-597063 | MS.gene040150:CDS |
| TAGTGGATTAGTTGGTCTTA+AGG | 0.355480 | 4.4:-597559 | MS.gene040150:CDS |
| TACAGTTCATGATTCATGAT+TGG | 0.365374 | 4.4:-599015 | MS.gene040150:CDS |
| AGCTTCGAGGCCACCAGTGC+AGG | 0.374076 | 4.4:+599100 | None:intergenic |
| GGCTGGTTATTCCCTTCTGC+AGG | 0.375799 | 4.4:-598043 | MS.gene040150:CDS |
| AGTTTGGCTTCCAAAACATT+AGG | 0.378367 | 4.4:-598562 | MS.gene040150:CDS |
| AATCTTCCCACTTACTAATT+GGG | 0.380096 | 4.4:+596883 | None:intergenic |
| CTCATTGCACATGATATTGA+TGG | 0.387523 | 4.4:-597101 | MS.gene040150:CDS |
| TGATTGGATTGATCATTTAG+AGG | 0.390749 | 4.4:-598999 | MS.gene040150:CDS |
| AACTCTTCAGTAAGCGAATA+GGG | 0.394166 | 4.4:+597516 | None:intergenic |
| CTACAGTCCAATCAATTGTA+TGG | 0.403949 | 4.4:+597791 | None:intergenic |
| CTACCGATCAAGTGATCGTC+GGG | 0.415701 | 4.4:+599278 | None:intergenic |
| ACTCTATAGGTATGCAAGAT+TGG | 0.417959 | 4.4:-597839 | MS.gene040150:CDS |
| GAACTCTTCAGTAAGCGAAT+AGG | 0.419424 | 4.4:+597515 | None:intergenic |
| ATTTCGAACATCACCGGATA+CGG | 0.419806 | 4.4:+598071 | None:intergenic |
| TCCATAGTAGCCATGTCAAC+TGG | 0.420756 | 4.4:+597062 | None:intergenic |
| TAGTTTATAGAGATAGAGAA+AGG | 0.421895 | 4.4:-596950 | MS.gene040150:CDS |
| AACACTAACATAGAAAAGTA+TGG | 0.422519 | 4.4:+599603 | None:intergenic |
| TGGCATCCATGAGGATCAAC+TGG | 0.432200 | 4.4:-597744 | MS.gene040150:intron |
| AAGACTAAGAAATTTCAAAC+TGG | 0.433686 | 4.4:-598599 | MS.gene040150:CDS |
| TTGATGATGAGCAACTCTAT+AGG | 0.440552 | 4.4:-597852 | MS.gene040150:CDS |
| TCTTTGTGATCATGGCTTCA+AGG | 0.441291 | 4.4:-596725 | MS.gene040150:intron |
| AGTTTATAGAGATAGAGAAA+GGG | 0.446296 | 4.4:-596949 | MS.gene040150:CDS |
| GGGTGGTTGCACGTGCCTGC+CGG | 0.447014 | 4.4:+599299 | None:intergenic |
| GGAGCAAATGTTAGTATCCA+TGG | 0.447899 | 4.4:-597180 | MS.gene040150:CDS |
| CCCTGGTCTCCAACCTCTTG+TGG | 0.448983 | 4.4:-599647 | MS.gene040150:CDS |
| GCCACAAGAGGTTGGAGACC+AGG | 0.457452 | 4.4:+599646 | None:intergenic |
| AGTTGCTCATCATCAAAATC+AGG | 0.460874 | 4.4:+597859 | None:intergenic |
| TCCAAAACATTAGGACTCCT+TGG | 0.461125 | 4.4:-598553 | MS.gene040150:CDS |
| CTTTCTTGCTAGAAGCTTCG+AGG | 0.462793 | 4.4:+599087 | None:intergenic |
| TCATTTAGAGGACACTGAAC+AGG | 0.462942 | 4.4:-598987 | MS.gene040150:intron |
| CCGGTGATGTTCGAAATTCA+TGG | 0.466050 | 4.4:-598065 | MS.gene040150:CDS |
| GCATAAGCTTCCAGTGTTGT+TGG | 0.466181 | 4.4:-599432 | MS.gene040150:CDS |
| CTTAAGGAGCCAAGAGATCA+TGG | 0.466526 | 4.4:-597543 | MS.gene040150:CDS |
| TAGGGAACTCCATGATCTCT+TGG | 0.467798 | 4.4:+597534 | None:intergenic |
| CGAAACATCAAGCCTACAAC+AGG | 0.469821 | 4.4:-597444 | MS.gene040150:CDS |
| GGGATGGAAGTGTGATATAT+GGG | 0.472264 | 4.4:-598191 | MS.gene040150:CDS |
| GAGGCCACCAGTGCAGGGTG+AGG | 0.479639 | 4.4:+599106 | None:intergenic |
| TACAATCTGTTGCATGTTGG+AGG | 0.481984 | 4.4:-599368 | MS.gene040150:CDS |
| CCCGAGCTTAGTGGATTAGT+TGG | 0.482142 | 4.4:-597567 | MS.gene040150:CDS |
| ATAAGCTTCCAGTGTTGTTG+GGG | 0.485280 | 4.4:-599430 | MS.gene040150:CDS |
| AGAAGGGAATGAGCAGAGTA+AGG | 0.488277 | 4.4:-598161 | MS.gene040150:CDS |
| GGTAGTCAGGGAACTATCAT+TGG | 0.489155 | 4.4:-599260 | MS.gene040150:CDS |
| TTTCGAAGGACAAGCTCCTC+AGG | 0.489212 | 4.4:+597462 | None:intergenic |
| ACCAACTAATCCACTAAGCT+CGG | 0.494691 | 4.4:+597566 | None:intergenic |
| GTTTATAGAGATAGAGAAAG+GGG | 0.495286 | 4.4:-596948 | MS.gene040150:CDS |
| AAACTGAAGATCTCAGAAGA+TGG | 0.498138 | 4.4:-598123 | MS.gene040150:CDS |
| GTAGCCATGTCAACTGGATC+AGG | 0.498191 | 4.4:+597068 | None:intergenic |
| GTGCCAATGACAGAAATGAT+AGG | 0.502812 | 4.4:-597239 | MS.gene040150:CDS |
| AGAAAAGTATGGTATCAAAG+AGG | 0.504773 | 4.4:+599614 | None:intergenic |
| TGATGATGATGTTGAGAAGC+TGG | 0.506358 | 4.4:-596817 | MS.gene040150:CDS |
| CTTTGATCTTCTTCTCAGCA+TGG | 0.506564 | 4.4:+596778 | None:intergenic |
| ATGAGGTTCCTTAGCCATGT+TGG | 0.507797 | 4.4:+597119 | None:intergenic |
| GATGTTCGAAATTCATGGGC+TGG | 0.508622 | 4.4:-598060 | MS.gene040150:CDS |
| AGACCCTCACCCTGCACTGG+TGG | 0.509737 | 4.4:-599110 | MS.gene040150:CDS |
| CTTTGAAGGATGTGATTGAC+AGG | 0.509857 | 4.4:-596524 | MS.gene040150:CDS |
| GAGAAGCTGGACTTGATAGT+TGG | 0.512234 | 4.4:-596804 | MS.gene040150:CDS |
| CAGCCGCTTGAGTAACCATC+AGG | 0.514618 | 4.4:+598647 | None:intergenic |
| ACCCCATAATTTAAAGTCGT+CGG | 0.514864 | 4.4:+599224 | None:intergenic |
| ATAGAGAAAGGGGAGTTGCA+AGG | 0.518453 | 4.4:-596938 | MS.gene040150:CDS |
| GACTTACCAGTTGATCCTCA+TGG | 0.521146 | 4.4:+597738 | None:intergenic |
| GTTAGACCCTCACCCTGCAC+TGG | 0.526913 | 4.4:-599113 | MS.gene040150:CDS |
| TTTCGAACATCACCGGATAC+GGG | 0.528141 | 4.4:+598072 | None:intergenic |
| GGAACTTTCCAACATGGCTA+AGG | 0.528495 | 4.4:-597127 | MS.gene040150:CDS |
| TTGGAGACCAGGGTGAATGA+AGG | 0.531161 | 4.4:+599657 | None:intergenic |
| CGTTACAATCTGTTGCATGT+TGG | 0.531167 | 4.4:-599371 | MS.gene040150:CDS |
| GAGAAAGGTATTCCCGTATC+CGG | 0.532581 | 4.4:-598084 | MS.gene040150:CDS |
| TAATAAACAAAGCCTGCAGA+AGG | 0.533377 | 4.4:+598031 | None:intergenic |
| TAATGATCCCAATTAGTAAG+TGG | 0.534721 | 4.4:-596890 | MS.gene040150:CDS |
| AACTGAAGATCTCAGAAGAT+GGG | 0.535040 | 4.4:-598122 | MS.gene040150:CDS |
| CTTCTTGAGCATGATGAGAA+AGG | 0.538966 | 4.4:-598099 | MS.gene040150:CDS |
| AAACAAAACAGAGTCTTTGA+AGG | 0.539259 | 4.4:-596538 | MS.gene040150:CDS |
| GCTTCGAGGCCACCAGTGCA+GGG | 0.541610 | 4.4:+599101 | None:intergenic |
| CTTTATGGAACTTTCCAACA+TGG | 0.544514 | 4.4:-597133 | MS.gene040150:CDS |
| TCTACACCCTTCATTCACCC+TGG | 0.544687 | 4.4:-599664 | MS.gene040150:CDS |
| ATGCTGAGAAGAAGATCAAA+GGG | 0.545504 | 4.4:-596776 | MS.gene040150:CDS |
| AGGCCACCAGTGCAGGGTGA+GGG | 0.545996 | 4.4:+599107 | None:intergenic |
| CTCAAGTGCATTCTCTGTGT+GGG | 0.546472 | 4.4:-596466 | MS.gene040150:CDS |
| GTCAGGGAACTATCATTGGC+CGG | 0.549049 | 4.4:-599256 | MS.gene040150:CDS |
| CGGTGATGTTCGAAATTCAT+GGG | 0.553151 | 4.4:-598064 | MS.gene040150:CDS |
| TTGTAGGCTTGATGTTTCGA+AGG | 0.557809 | 4.4:+597448 | None:intergenic |
| AGAAAGAGCTTCATAGACAC+AGG | 0.560247 | 4.4:-599070 | MS.gene040150:CDS |
| CATGCTGAGAAGAAGATCAA+AGG | 0.562475 | 4.4:-596777 | MS.gene040150:CDS |
| GGGGCTTATCTCAAATATAG+AGG | 0.563891 | 4.4:+596414 | None:intergenic |
| ATATATGGGAACAATGAGAA+GGG | 0.571299 | 4.4:-598177 | MS.gene040150:CDS |
| GATATATGGGAACAATGAGA+AGG | 0.571690 | 4.4:-598178 | MS.gene040150:CDS |
| CCATGAATTTCGAACATCAC+CGG | 0.573382 | 4.4:+598065 | None:intergenic |
| TGGAGACCAGGGTGAATGAA+GGG | 0.574228 | 4.4:+599658 | None:intergenic |
| ACCACATGGTTGGTGGCCCA+TGG | 0.575046 | 4.4:+597163 | None:intergenic |
| GAAAAGTATGGTATCAAAGA+GGG | 0.584808 | 4.4:+599615 | None:intergenic |
| TAACAGCACCACATGGTTGG+TGG | 0.592861 | 4.4:+597156 | None:intergenic |
| TATGCATATCGTACTCCGGC+AGG | 0.593657 | 4.4:-599314 | MS.gene040150:CDS |
| AATGATCCCAATTAGTAAGT+GGG | 0.596335 | 4.4:-596889 | MS.gene040150:CDS |
| AAAACATTAGGACTCCTTGG+TGG | 0.596480 | 4.4:-598550 | MS.gene040150:intron |
| GCTCAAGTGCATTCTCTGTG+TGG | 0.597626 | 4.4:-596467 | MS.gene040150:CDS |
| CACCCCGACGATCACTTGAT+CGG | 0.601063 | 4.4:-599281 | MS.gene040150:CDS |
| GAGCAAATGTTAGTATCCAT+GGG | 0.602349 | 4.4:-597179 | MS.gene040150:CDS |
| CCAACTAATCCACTAAGCTC+GGG | 0.606288 | 4.4:+597567 | None:intergenic |
| CCACAAGAGGTTGGAGACCA+GGG | 0.607968 | 4.4:+599647 | None:intergenic |
| AGAGTAAGGACATTCAAAGA+GGG | 0.611673 | 4.4:-598147 | MS.gene040150:CDS |
| AAGGGTGTAGAGAAAAGAGA+AGG | 0.612180 | 4.4:+599676 | None:intergenic |
| CATCAATATCATGTGCAATG+AGG | 0.613592 | 4.4:+597102 | None:intergenic |
| AGATTTAACAGATGATCAAG+AGG | 0.616215 | 4.4:-596865 | MS.gene040150:CDS |
| GTGGAAATCAGTGCTCCTGA+TGG | 0.623708 | 4.4:-598662 | MS.gene040150:CDS |
| TCCGACGACTTTAAATTATG+GGG | 0.625649 | 4.4:-599225 | MS.gene040150:intron |
| CAGAGTAAGGACATTCAAAG+AGG | 0.629292 | 4.4:-598148 | MS.gene040150:CDS |
| CAGAAATGATAGGAAAACAA+GGG | 0.629712 | 4.4:-597229 | MS.gene040150:CDS |
| GATCACTTGATCGGTAGTCA+GGG | 0.631545 | 4.4:-599272 | MS.gene040150:CDS |
| ACAGAAATGATAGGAAAACA+AGG | 0.633600 | 4.4:-597230 | MS.gene040150:CDS |
| AATAAACAAAGCCTGCAGAA+GGG | 0.635093 | 4.4:+598032 | None:intergenic |
| GTTGACATGGCTACTATGGA+AGG | 0.637307 | 4.4:-597059 | MS.gene040150:intron |
| GCTCCTGATGGTTACTCAAG+CGG | 0.639000 | 4.4:-598650 | MS.gene040150:CDS |
| TTGCATGTTGGAGGAGTGAG+TGG | 0.640130 | 4.4:-599359 | MS.gene040150:CDS |
| CGATCAAGTGATCGTCGGGG+TGG | 0.644828 | 4.4:+599282 | None:intergenic |
| AAGACCTGATCCAGTTGACA+TGG | 0.645059 | 4.4:-597072 | MS.gene040150:CDS |
| ACTACCGATCAAGTGATCGT+CGG | 0.652642 | 4.4:+599277 | None:intergenic |
| AAGTAACAGCACCACATGGT+TGG | 0.654011 | 4.4:+597153 | None:intergenic |
| TTGTGGACAAAATTGTGCTG+TGG | 0.655463 | 4.4:-599454 | MS.gene040150:CDS |
| TCCAAAACATACACAAACGA+AGG | 0.658132 | 4.4:-596573 | MS.gene040150:CDS |
| GGTTATTGAAGCTCTCAAAG+AGG | 0.662069 | 4.4:-596844 | MS.gene040150:CDS |
| AGAAATGATAGGAAAACAAG+GGG | 0.662137 | 4.4:-597228 | MS.gene040150:CDS |
| ACACTATGCATATCGTACTC+CGG | 0.664405 | 4.4:-599318 | MS.gene040150:CDS |
| TAAGCTTCCAGTGTTGTTGG+GGG | 0.664838 | 4.4:-599429 | MS.gene040150:CDS |
| CATAAAGTAACAGCACCACA+TGG | 0.666274 | 4.4:+597149 | None:intergenic |
| CCATAATTTAAAGTCGTCGG+AGG | 0.668887 | 4.4:+599227 | None:intergenic |
| GATGCATGCACTCTTGCCTG+AGG | 0.680891 | 4.4:-597478 | MS.gene040150:CDS |
| AATTAAACTACTTACCACCA+AGG | 0.695218 | 4.4:+598536 | None:intergenic |
| TCCATGGGCCACCAACCATG+TGG | 0.700524 | 4.4:-597164 | MS.gene040150:CDS |
| GAAAGAGCTTCATAGACACA+GGG | 0.708446 | 4.4:-599069 | MS.gene040150:CDS |
| TACCGATCAAGTGATCGTCG+GGG | 0.754460 | 4.4:+599279 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATAAAAGAATTAAA+TGG | + | chr4.4:596910-596929 | None:intergenic | 10.0% |
| !!! | CAAATAAAATTTGATTATTT+TGG | - | chr4.4:599424-599443 | MS.gene040150:CDS | 10.0% |
| !! | ATAAAAAATTCTTAACTCTT+GGG | + | chr4.4:598748-598767 | None:intergenic | 15.0% |
| !! | TGATAATATTGAATTTATGT+AGG | - | chr4.4:596615-596634 | MS.gene040150:CDS | 15.0% |
| !!! | ATAATTGCATATGTTATTTA+GGG | - | chr4.4:598840-598859 | MS.gene040150:intron | 15.0% |
| !!! | TATAATTGCATATGTTATTT+AGG | - | chr4.4:598839-598858 | MS.gene040150:intron | 15.0% |
| !! | AAAAATTTGAAAGTCTTTAG+AGG | + | chr4.4:597481-597500 | None:intergenic | 20.0% |
| !! | AAGAAATTCAAAGATTCATT+TGG | - | chr4.4:598498-598517 | MS.gene040150:intron | 20.0% |
| !! | CATAAAAAATTCTTAACTCT+TGG | + | chr4.4:598749-598768 | None:intergenic | 20.0% |
| !! | TCTATGTTAAATGAGAATAT+AGG | - | chr4.4:597171-597190 | MS.gene040150:CDS | 20.0% |
| !!! | AAAATTTGATTATTTTGGCT+TGG | - | chr4.4:599429-599448 | MS.gene040150:CDS | 20.0% |
| !!! | AGATTCATTTGGAAATATTT+TGG | - | chr4.4:598509-598528 | MS.gene040150:intron | 20.0% |
| !!! | GATTCATTTGGAAATATTTT+GGG | - | chr4.4:598510-598529 | MS.gene040150:intron | 20.0% |
| !!! | GTTAAACTTTCATTTTCTTT+TGG | - | chr4.4:598456-598475 | MS.gene040150:intron | 20.0% |
| !!! | TAGAGTTTACTATTGTTTTT+TGG | - | chr4.4:597873-597892 | MS.gene040150:intron | 20.0% |
| !!! | TATACTTTTCAAGTATTGAA+GGG | + | chr4.4:598695-598714 | None:intergenic | 20.0% |
| !!! | TTTTGGTATGTGAATTATTA+GGG | - | chr4.4:597890-597909 | MS.gene040150:intron | 20.0% |
| !!! | TTTTTGGTATGTGAATTATT+AGG | - | chr4.4:597889-597908 | MS.gene040150:intron | 20.0% |
| ! | AACACTAACATAGAAAAGTA+TGG | + | chr4.4:596501-596520 | None:intergenic | 25.0% |
| ! | AACACTTGTGAAGATATTTA+AGG | - | chr4.4:597653-597672 | MS.gene040150:intron | 25.0% |
| ! | AAGACTAAGAAATTTCAAAC+TGG | - | chr4.4:597502-597521 | MS.gene040150:CDS | 25.0% |
| ! | AGTTTATAGAGATAGAGAAA+GGG | - | chr4.4:599152-599171 | MS.gene040150:intron | 25.0% |
| ! | CAAAAATCCATACAATTGAT+TGG | - | chr4.4:598303-598322 | MS.gene040150:intron | 25.0% |
| ! | CTTAGATCCAAATTACATTA+AGG | + | chr4.4:597386-597405 | None:intergenic | 25.0% |
| ! | GAAAAAAGGCTTTCAAAAAT+AGG | - | chr4.4:598895-598914 | MS.gene040150:intron | 25.0% |
| ! | GTTGAACCATCAAATTTAAA+AGG | + | chr4.4:597788-597807 | None:intergenic | 25.0% |
| ! | TAGTTTATAGAGATAGAGAA+AGG | - | chr4.4:599151-599170 | MS.gene040150:intron | 25.0% |
| ! | TCCAAAACCTTAATGTAATT+TGG | - | chr4.4:597376-597395 | MS.gene040150:intron | 25.0% |
| ! | TGTCAGTGTAAAAACTAAAA+AGG | + | chr4.4:597734-597753 | None:intergenic | 25.0% |
| ! | TTTCTTTATCTTTGTGATCA+TGG | - | chr4.4:599368-599387 | MS.gene040150:CDS | 25.0% |
| !! | CTTAAAAACTGATACTCTTT+TGG | - | chr4.4:598337-598356 | MS.gene040150:intron | 25.0% |
| !! | TAACCACCTTTTAAATTTGA+TGG | - | chr4.4:597779-597798 | MS.gene040150:CDS | 25.0% |
| !! | TATAGAGGTATGTATTTCTT+AGG | + | chr4.4:599675-599694 | None:intergenic | 25.0% |
| !! | TCCAAATTACATTAAGGTTT+TGG | + | chr4.4:597380-597399 | None:intergenic | 25.0% |
| !! | TTTTCATCTGTTGTATAACT+TGG | - | chr4.4:598138-598157 | MS.gene040150:CDS | 25.0% |
| !!! | GAAAACATTTTTTCATAGTG+TGG | - | chr4.4:598793-598812 | MS.gene040150:intron | 25.0% |
| !!! | GTATACTTTTCAAGTATTGA+AGG | + | chr4.4:598696-598715 | None:intergenic | 25.0% |
| !!! | TGCATAAGGATATATTTTGA+AGG | - | chr4.4:598386-598405 | MS.gene040150:intron | 25.0% |
| AAACAAAACAGAGTCTTTGA+AGG | - | chr4.4:599563-599582 | MS.gene040150:intron | 30.0% | |
| AAATCTTCCCACTTACTAAT+TGG | + | chr4.4:599222-599241 | None:intergenic | 30.0% | |
| AAGGCTTTCAAAAATAGGAA+TGG | - | chr4.4:598900-598919 | MS.gene040150:intron | 30.0% | |
| AATCTTCCCACTTACTAATT+GGG | + | chr4.4:599221-599240 | None:intergenic | 30.0% | |
| AATGATCCCAATTAGTAAGT+GGG | - | chr4.4:599212-599231 | MS.gene040150:intron | 30.0% | |
| AATTAAACTACTTACCACCA+AGG | + | chr4.4:597568-597587 | None:intergenic | 30.0% | |
| ACAGAAATGATAGGAAAACA+AGG | - | chr4.4:598871-598890 | MS.gene040150:intron | 30.0% | |
| AGAAATGATAGGAAAACAAG+GGG | - | chr4.4:598873-598892 | MS.gene040150:intron | 30.0% | |
| AGATTTAACAGATGATCAAG+AGG | - | chr4.4:599236-599255 | MS.gene040150:CDS | 30.0% | |
| AGCTATGTATGTTTAGATTC+GGG | + | chr4.4:597285-597304 | None:intergenic | 30.0% | |
| ATATATGGGAACAATGAGAA+GGG | - | chr4.4:597924-597943 | MS.gene040150:intron | 30.0% | |
| CAGAAATGATAGGAAAACAA+GGG | - | chr4.4:598872-598891 | MS.gene040150:intron | 30.0% | |
| CAGCTATGTATGTTTAGATT+CGG | + | chr4.4:597286-597305 | None:intergenic | 30.0% | |
| CATTATGCAAGAAATGCAAT+TGG | + | chr4.4:597409-597428 | None:intergenic | 30.0% | |
| GAACCATCAAATTTAAAAGG+TGG | + | chr4.4:597785-597804 | None:intergenic | 30.0% | |
| GGTATGTATTTCTTAGGATT+TGG | + | chr4.4:599669-599688 | None:intergenic | 30.0% | |
| GTTTATAGAGATAGAGAAAG+GGG | - | chr4.4:599153-599172 | MS.gene040150:intron | 30.0% | |
| TAAGGAACTGATGTAACAAA+GGG | - | chr4.4:597671-597690 | MS.gene040150:intron | 30.0% | |
| TAATGATCCCAATTAGTAAG+TGG | - | chr4.4:599211-599230 | MS.gene040150:intron | 30.0% | |
| TACAGTTCATGATTCATGAT+TGG | - | chr4.4:597086-597105 | MS.gene040150:CDS | 30.0% | |
| TATCTTCACAAGTGTTTACA+TGG | + | chr4.4:597649-597668 | None:intergenic | 30.0% | |
| TGATTGGATTGATCATTTAG+AGG | - | chr4.4:597102-597121 | MS.gene040150:CDS | 30.0% | |
| TGCATTTCTTGCATAATGTT+TGG | - | chr4.4:597411-597430 | MS.gene040150:intron | 30.0% | |
| TTAAGGAACTGATGTAACAA+AGG | - | chr4.4:597670-597689 | MS.gene040150:intron | 30.0% | |
| TTTCCTATCATTTCTGTCAT+TGG | + | chr4.4:598868-598887 | None:intergenic | 30.0% | |
| ! | AACTTTCATTTTCTTTTGGC+AGG | - | chr4.4:598460-598479 | MS.gene040150:intron | 30.0% |
| ! | AGAAAAGTATGGTATCAAAG+AGG | + | chr4.4:596490-596509 | None:intergenic | 30.0% |
| ! | GAAAAGTATGGTATCAAAGA+GGG | + | chr4.4:596489-596508 | None:intergenic | 30.0% |
| ! | TATGTAGGTGATACATTTTG+TGG | - | chr4.4:596630-596649 | MS.gene040150:intron | 30.0% |
| ! | TCTTGCATAATGTTTGGAAT+AGG | - | chr4.4:597417-597436 | MS.gene040150:CDS | 30.0% |
| ! | TTTTTGTGTTCTTTGCTTAC+AGG | - | chr4.4:598211-598230 | MS.gene040150:intron | 30.0% |
| !!! | ACATTAAGGTTTTGGAGAAT+TGG | + | chr4.4:597372-597391 | None:intergenic | 30.0% |
| !!! | TATTTTGGCTTGGAATCTTA+TGG | - | chr4.4:599439-599458 | MS.gene040150:CDS | 30.0% |
| AAACTGAAGATCTCAGAAGA+TGG | - | chr4.4:597978-597997 | MS.gene040150:intron | 35.0% | |
| AACTCTTCAGTAAGCGAATA+GGG | + | chr4.4:598588-598607 | None:intergenic | 35.0% | |
| AACTGAAGATCTCAGAAGAT+GGG | - | chr4.4:597979-597998 | MS.gene040150:intron | 35.0% | |
| AAGAGTTCACGAGTGTTTAT+AGG | - | chr4.4:598601-598620 | MS.gene040150:CDS | 35.0% | |
| AATAAACAAAGCCTGCAGAA+GGG | + | chr4.4:598072-598091 | None:intergenic | 35.0% | |
| ACTCTATAGGTATGCAAGAT+TGG | - | chr4.4:598262-598281 | MS.gene040150:intron | 35.0% | |
| AGAGTAAGGACATTCAAAGA+GGG | - | chr4.4:597954-597973 | MS.gene040150:intron | 35.0% | |
| AGCTGTATCTGATGTAACAA+AGG | - | chr4.4:597301-597320 | MS.gene040150:intron | 35.0% | |
| AGTTCAGCAAACAGGATTAT+TGG | - | chr4.4:597835-597854 | MS.gene040150:CDS | 35.0% | |
| AGTTGCTCATCATCAAAATC+AGG | + | chr4.4:598245-598264 | None:intergenic | 35.0% | |
| ATGCTGAGAAGAAGATCAAA+GGG | - | chr4.4:599325-599344 | MS.gene040150:CDS | 35.0% | |
| CATCAATATCATGTGCAATG+AGG | + | chr4.4:599002-599021 | None:intergenic | 35.0% | |
| CTACAGTCCAATCAATTGTA+TGG | + | chr4.4:598313-598332 | None:intergenic | 35.0% | |
| CTCATTGCACATGATATTGA+TGG | - | chr4.4:599000-599019 | MS.gene040150:CDS | 35.0% | |
| CTCCGACGACTTTAAATTAT+GGG | - | chr4.4:596875-596894 | MS.gene040150:CDS | 35.0% | |
| CTTTATGGAACTTTCCAACA+TGG | - | chr4.4:598968-598987 | MS.gene040150:intron | 35.0% | |
| GAGCAAATGTTAGTATCCAT+GGG | - | chr4.4:598922-598941 | MS.gene040150:intron | 35.0% | |
| GATATATGGGAACAATGAGA+AGG | - | chr4.4:597923-597942 | MS.gene040150:intron | 35.0% | |
| GCTGTATCTGATGTAACAAA+GGG | - | chr4.4:597302-597321 | MS.gene040150:intron | 35.0% | |
| GGTATGTGAATTATTAGGGA+TGG | - | chr4.4:597894-597913 | MS.gene040150:intron | 35.0% | |
| TAATAAACAAAGCCTGCAGA+AGG | + | chr4.4:598073-598092 | None:intergenic | 35.0% | |
| TAGGAAAACAAGGGGAAAAA+AGG | - | chr4.4:598881-598900 | MS.gene040150:intron | 35.0% | |
| TCCAAAACATACACAAACGA+AGG | - | chr4.4:599528-599547 | MS.gene040150:intron | 35.0% | |
| TCCGACGACTTTAAATTATG+GGG | - | chr4.4:596876-596895 | MS.gene040150:CDS | 35.0% | |
| ! | ACCCCATAATTTAAAGTCGT+CGG | + | chr4.4:596880-596899 | None:intergenic | 35.0% |
| ! | ACCTTCGTTTGTGTATGTTT+TGG | + | chr4.4:599532-599551 | None:intergenic | 35.0% |
| ! | AGTTTGGCTTCCAAAACATT+AGG | - | chr4.4:597539-597558 | MS.gene040150:CDS | 35.0% |
| ! | ATCCAATTTTCAGTCATCTC+AGG | + | chr4.4:599609-599628 | None:intergenic | 35.0% |
| ! | GAAGATTTAGTTCAGCAAAC+AGG | - | chr4.4:597827-597846 | MS.gene040150:CDS | 35.0% |
| ! | TACAAAAGCATGCTTGCAAA+AGG | + | chr4.4:599083-599102 | None:intergenic | 35.0% |
| ! | TCATTTTCTTTTGGCAGGTA+TGG | - | chr4.4:598465-598484 | MS.gene040150:intron | 35.0% |
| ! | TCCAATTTTCAGTCATCTCA+GGG | + | chr4.4:599608-599627 | None:intergenic | 35.0% |
| ! | TGCATAATGTTTGGAATAGG+TGG | - | chr4.4:597420-597439 | MS.gene040150:CDS | 35.0% |
| ! | TGGAATCTTATGGTTTTCTG+TGG | - | chr4.4:599449-599468 | MS.gene040150:CDS | 35.0% |
| ! | TTTGGCAGGTATGGATTTTT+GGG | - | chr4.4:598474-598493 | MS.gene040150:intron | 35.0% |
| ! | TTTTGGCAGGTATGGATTTT+TGG | - | chr4.4:598473-598492 | MS.gene040150:intron | 35.0% |
| !! | GGATATATTTTGAAGGAGAC+AGG | - | chr4.4:598393-598412 | MS.gene040150:intron | 35.0% |
| !! | TAGTGGATTAGTTGGTCTTA+AGG | - | chr4.4:598542-598561 | MS.gene040150:intron | 35.0% |
| !! | TCAACATGATAGCTTGTTCA+TGG | - | chr4.4:597062-597081 | MS.gene040150:CDS | 35.0% |
| !! | TTGATGATGAGCAACTCTAT+AGG | - | chr4.4:598249-598268 | MS.gene040150:intron | 35.0% |
| !!! | ACACAAACGAAGGTTTTGAA+TGG | - | chr4.4:599538-599557 | MS.gene040150:intron | 35.0% |
| !!! | CACAAACGAAGGTTTTGAAT+GGG | - | chr4.4:599539-599558 | MS.gene040150:intron | 35.0% |
| !!! | TAAGGTTTTGGAGAATTGGT+TGG | + | chr4.4:597368-597387 | None:intergenic | 35.0% |
| AAAACATTAGGACTCCTTGG+TGG | - | chr4.4:597551-597570 | MS.gene040150:CDS | 40.0% | |
| AAAACGCGCATTAATTTCCG+AGG | + | chr4.4:598195-598214 | None:intergenic | 40.0% | |
| ACACTATGCATATCGTACTC+CGG | - | chr4.4:596783-596802 | MS.gene040150:CDS | 40.0% | |
| ACCAACTAATCCACTAAGCT+CGG | + | chr4.4:598538-598557 | None:intergenic | 40.0% | |
| AGAAAGAGCTTCATAGACAC+AGG | - | chr4.4:597031-597050 | MS.gene040150:intron | 40.0% | |
| ATTTCGAACATCACCGGATA+CGG | + | chr4.4:598033-598052 | None:intergenic | 40.0% | |
| CAGAGTAAGGACATTCAAAG+AGG | - | chr4.4:597953-597972 | MS.gene040150:intron | 40.0% | |
| CATAAAGTAACAGCACCACA+TGG | + | chr4.4:598955-598974 | None:intergenic | 40.0% | |
| CATGCTGAGAAGAAGATCAA+AGG | - | chr4.4:599324-599343 | MS.gene040150:CDS | 40.0% | |
| CATTTGTCTTCTCCTGTTGT+AGG | + | chr4.4:598672-598691 | None:intergenic | 40.0% | |
| CCATGAATTTCGAACATCAC+CGG | + | chr4.4:598039-598058 | None:intergenic | 40.0% | |
| CCTCCGACGACTTTAAATTA+TGG | - | chr4.4:596874-596893 | MS.gene040150:CDS | 40.0% | |
| CGGTGATGTTCGAAATTCAT+GGG | - | chr4.4:598037-598056 | MS.gene040150:CDS | 40.0% | |
| CGTTACAATCTGTTGCATGT+TGG | - | chr4.4:596730-596749 | MS.gene040150:CDS | 40.0% | |
| CTGTGGTGACTATGATGTTT+AGG | - | chr4.4:599466-599485 | MS.gene040150:CDS | 40.0% | |
| CTTCTTGAGCATGATGAGAA+AGG | - | chr4.4:598002-598021 | MS.gene040150:CDS | 40.0% | |
| CTTTGATCTTCTTCTCAGCA+TGG | + | chr4.4:599326-599345 | None:intergenic | 40.0% | |
| GAAAGAGCTTCATAGACACA+GGG | - | chr4.4:597032-597051 | MS.gene040150:intron | 40.0% | |
| GAACTCTTCAGTAAGCGAAT+AGG | + | chr4.4:598589-598608 | None:intergenic | 40.0% | |
| GGAGCAAATGTTAGTATCCA+TGG | - | chr4.4:598921-598940 | MS.gene040150:intron | 40.0% | |
| GGGCAATATACTTGGGAATT+AGG | - | chr4.4:596692-596711 | MS.gene040150:intron | 40.0% | |
| GGTTATTGAAGCTCTCAAAG+AGG | - | chr4.4:599257-599276 | MS.gene040150:CDS | 40.0% | |
| GTGCCAATGACAGAAATGAT+AGG | - | chr4.4:598862-598881 | MS.gene040150:intron | 40.0% | |
| TACAATCTGTTGCATGTTGG+AGG | - | chr4.4:596733-596752 | MS.gene040150:CDS | 40.0% | |
| TCAACTGGTAAGTCTGCATA+AGG | - | chr4.4:598372-598391 | MS.gene040150:intron | 40.0% | |
| TCATTTAGAGGACACTGAAC+AGG | - | chr4.4:597114-597133 | MS.gene040150:CDS | 40.0% | |
| TCCAAAACATTAGGACTCCT+TGG | - | chr4.4:597548-597567 | MS.gene040150:CDS | 40.0% | |
| TCCCTGAGATGACTGAAAAT+TGG | - | chr4.4:599604-599623 | MS.gene040150:intron | 40.0% | |
| TCTTTGTGATCATGGCTTCA+AGG | - | chr4.4:599376-599395 | MS.gene040150:CDS | 40.0% | |
| TGGTGACTATGATGTTTAGG+AGG | - | chr4.4:599469-599488 | MS.gene040150:intron | 40.0% | |
| TTGTAGGCTTGATGTTTCGA+AGG | + | chr4.4:598656-598675 | None:intergenic | 40.0% | |
| TTGTGGACAAAATTGTGCTG+TGG | - | chr4.4:596647-596666 | MS.gene040150:intron | 40.0% | |
| TTGTTGGGGGCAATATACTT+GGG | - | chr4.4:596685-596704 | MS.gene040150:intron | 40.0% | |
| ! | AAGGGTGTAGAGAAAAGAGA+AGG | + | chr4.4:596428-596447 | None:intergenic | 40.0% |
| ! | ACCAAGGAGTCCTAATGTTT+TGG | + | chr4.4:597552-597571 | None:intergenic | 40.0% |
| ! | AGGGATGGAAGTGTGATATA+TGG | - | chr4.4:597909-597928 | MS.gene040150:intron | 40.0% |
| ! | ATAAGCTTCCAGTGTTGTTG+GGG | - | chr4.4:596671-596690 | MS.gene040150:intron | 40.0% |
| ! | ATACTCTTTTGGCATCCATG+AGG | - | chr4.4:598348-598367 | MS.gene040150:intron | 40.0% |
| ! | CATAAGCTTCCAGTGTTGTT+GGG | - | chr4.4:596670-596689 | MS.gene040150:intron | 40.0% |
| ! | CCATAATTTAAAGTCGTCGG+AGG | + | chr4.4:596877-596896 | None:intergenic | 40.0% |
| ! | CTTTGAAGGATGTGATTGAC+AGG | - | chr4.4:599577-599596 | MS.gene040150:intron | 40.0% |
| ! | GGGATGGAAGTGTGATATAT+GGG | - | chr4.4:597910-597929 | MS.gene040150:intron | 40.0% |
| ! | GGTATCAAAGAGGGTCATTT+TGG | + | chr4.4:596480-596499 | None:intergenic | 40.0% |
| ! | TGATGATGATGTTGAGAAGC+TGG | - | chr4.4:599284-599303 | MS.gene040150:CDS | 40.0% |
| ! | TTGGCAGGTATGGATTTTTG+GGG | - | chr4.4:598475-598494 | MS.gene040150:intron | 40.0% |
| !! | CATGTGGTGCTGTTACTTTA+TGG | - | chr4.4:598953-598972 | MS.gene040150:intron | 40.0% |
| !!! | ACTGCACTCATTTTTTGCCT+CGG | - | chr4.4:598175-598194 | MS.gene040150:CDS | 40.0% |
| AAGACCTGATCCAGTTGACA+TGG | - | chr4.4:599029-599048 | MS.gene040150:CDS | 45.0% | |
| AAGTAACAGCACCACATGGT+TGG | + | chr4.4:598951-598970 | None:intergenic | 45.0% | |
| ACTACCGATCAAGTGATCGT+CGG | + | chr4.4:596827-596846 | None:intergenic | 45.0% | |
| AGAAGGGAATGAGCAGAGTA+AGG | - | chr4.4:597940-597959 | MS.gene040150:intron | 45.0% | |
| ATAGAGAAAGGGGAGTTGCA+AGG | - | chr4.4:599163-599182 | MS.gene040150:intron | 45.0% | |
| ATGAGGTTCCTTAGCCATGT+TGG | + | chr4.4:598985-599004 | None:intergenic | 45.0% | |
| ATGAGTGCAGTGGCAGAAAA+TGG | + | chr4.4:598166-598185 | None:intergenic | 45.0% | |
| CCAACTAATCCACTAAGCTC+GGG | + | chr4.4:598537-598556 | None:intergenic | 45.0% | |
| CCGGTGATGTTCGAAATTCA+TGG | - | chr4.4:598036-598055 | MS.gene040150:CDS | 45.0% | |
| CGAAACATCAAGCCTACAAC+AGG | - | chr4.4:598657-598676 | MS.gene040150:CDS | 45.0% | |
| CTCAAGTGCATTCTCTGTGT+GGG | - | chr4.4:599635-599654 | MS.gene040150:CDS | 45.0% | |
| CTTAAGGAGCCAAGAGATCA+TGG | - | chr4.4:598558-598577 | MS.gene040150:CDS | 45.0% | |
| CTTTCTTGCTAGAAGCTTCG+AGG | + | chr4.4:597017-597036 | None:intergenic | 45.0% | |
| GACTTACCAGTTGATCCTCA+TGG | + | chr4.4:598366-598385 | None:intergenic | 45.0% | |
| GAGGCAAAAAATGAGTGCAG+TGG | + | chr4.4:598176-598195 | None:intergenic | 45.0% | |
| GATCACTTGATCGGTAGTCA+GGG | - | chr4.4:596829-596848 | MS.gene040150:CDS | 45.0% | |
| GATGTAACAAAGGGACACGA+TGG | - | chr4.4:597311-597330 | MS.gene040150:intron | 45.0% | |
| GATGTTCGAAATTCATGGGC+TGG | - | chr4.4:598041-598060 | MS.gene040150:CDS | 45.0% | |
| GCATAAGCTTCCAGTGTTGT+TGG | - | chr4.4:596669-596688 | MS.gene040150:intron | 45.0% | |
| GGAACTTTCCAACATGGCTA+AGG | - | chr4.4:598974-598993 | MS.gene040150:intron | 45.0% | |
| GGCTCTTCACACATGAAGTT+TGG | - | chr4.4:597523-597542 | MS.gene040150:CDS | 45.0% | |
| GGTAGTCAGGGAACTATCAT+TGG | - | chr4.4:596841-596860 | MS.gene040150:CDS | 45.0% | |
| GTTGACATGGCTACTATGGA+AGG | - | chr4.4:599042-599061 | MS.gene040150:CDS | 45.0% | |
| GTTGTTGGGGGCAATATACT+TGG | - | chr4.4:596684-596703 | MS.gene040150:intron | 45.0% | |
| TAGGGAACTCCATGATCTCT+TGG | + | chr4.4:598570-598589 | None:intergenic | 45.0% | |
| TATATTGCCCCCAACAACAC+TGG | + | chr4.4:596682-596701 | None:intergenic | 45.0% | |
| TCCAGTTGACATGGCTACTA+TGG | - | chr4.4:599038-599057 | MS.gene040150:CDS | 45.0% | |
| TCCATAGTAGCCATGTCAAC+TGG | + | chr4.4:599042-599061 | None:intergenic | 45.0% | |
| TTTCGAACATCACCGGATAC+GGG | + | chr4.4:598032-598051 | None:intergenic | 45.0% | |
| ! | GAGAAGCTGGACTTGATAGT+TGG | - | chr4.4:599297-599316 | MS.gene040150:CDS | 45.0% |
| ! | TAAGCTTCCAGTGTTGTTGG+GGG | - | chr4.4:596672-596691 | MS.gene040150:intron | 45.0% |
| !! | AGTGTGGTTCTGAATGCGAA+GGG | - | chr4.4:598809-598828 | MS.gene040150:intron | 45.0% |
| !! | GAGAAAGGTATTCCCGTATC+CGG | - | chr4.4:598017-598036 | MS.gene040150:CDS | 45.0% |
| !! | TAGTGTGGTTCTGAATGCGA+AGG | - | chr4.4:598808-598827 | MS.gene040150:intron | 45.0% |
| !! | TCATTTTGGCCACAAGAGGT+TGG | + | chr4.4:596466-596485 | None:intergenic | 45.0% |
| !! | CATATATAATTAATAAATAT+TGG | + | chr4.4:597141-597160 | None:intergenic | 5.0% |
| CGATCACTTGATCGGTAGTC+AGG | - | chr4.4:596828-596847 | MS.gene040150:CDS | 50.0% | |
| CTACCGATCAAGTGATCGTC+GGG | + | chr4.4:596826-596845 | None:intergenic | 50.0% | |
| GCTCAAGTGCATTCTCTGTG+TGG | - | chr4.4:599634-599653 | MS.gene040150:CDS | 50.0% | |
| GCTCCTGATGGTTACTCAAG+CGG | - | chr4.4:597451-597470 | MS.gene040150:CDS | 50.0% | |
| GTAGCCATGTCAACTGGATC+AGG | + | chr4.4:599036-599055 | None:intergenic | 50.0% | |
| GTCAGGGAACTATCATTGGC+CGG | - | chr4.4:596845-596864 | MS.gene040150:CDS | 50.0% | |
| GTGGAAATCAGTGCTCCTGA+TGG | - | chr4.4:597439-597458 | MS.gene040150:CDS | 50.0% | |
| TAACAGCACCACATGGTTGG+TGG | + | chr4.4:598948-598967 | None:intergenic | 50.0% | |
| TACCGATCAAGTGATCGTCG+GGG | + | chr4.4:596825-596844 | None:intergenic | 50.0% | |
| TATGCATATCGTACTCCGGC+AGG | - | chr4.4:596787-596806 | MS.gene040150:CDS | 50.0% | |
| TCTACACCCTTCATTCACCC+TGG | - | chr4.4:596437-596456 | MS.gene040150:CDS | 50.0% | |
| TGGAGACCAGGGTGAATGAA+GGG | + | chr4.4:596446-596465 | None:intergenic | 50.0% | |
| TGGCATCCATGAGGATCAAC+TGG | - | chr4.4:598357-598376 | MS.gene040150:intron | 50.0% | |
| TTGCATGTTGGAGGAGTGAG+TGG | - | chr4.4:596742-596761 | MS.gene040150:CDS | 50.0% | |
| TTGGAGACCAGGGTGAATGA+AGG | + | chr4.4:596447-596466 | None:intergenic | 50.0% | |
| TTTCGAAGGACAAGCTCCTC+AGG | + | chr4.4:598642-598661 | None:intergenic | 50.0% | |
| ! | AAGTCGTCGGAGGCATATTC+CGG | + | chr4.4:596867-596886 | None:intergenic | 50.0% |
| !! | AGGGTCATTTTGGCCACAAG+AGG | + | chr4.4:596470-596489 | None:intergenic | 50.0% |
| !! | CCCGAGCTTAGTGGATTAGT+TGG | - | chr4.4:598534-598553 | MS.gene040150:intron | 50.0% |
| !!! | ATTTTGGGACCCGAGCTTAG+TGG | - | chr4.4:598525-598544 | MS.gene040150:intron | 50.0% |
| CACCCCGACGATCACTTGAT+CGG | - | chr4.4:596820-596839 | MS.gene040150:CDS | 55.0% | |
| CAGCCGCTTGAGTAACCATC+AGG | + | chr4.4:597457-597476 | None:intergenic | 55.0% | |
| CCACAAGAGGTTGGAGACCA+GGG | + | chr4.4:596457-596476 | None:intergenic | 55.0% | |
| GATGCATGCACTCTTGCCTG+AGG | - | chr4.4:598623-598642 | MS.gene040150:CDS | 55.0% | |
| ! | GGCTGGTTATTCCCTTCTGC+AGG | - | chr4.4:598058-598077 | MS.gene040150:CDS | 55.0% |
| CCCTGGTCTCCAACCTCTTG+TGG | - | chr4.4:596454-596473 | MS.gene040150:CDS | 60.0% | |
| CGATCAAGTGATCGTCGGGG+TGG | + | chr4.4:596822-596841 | None:intergenic | 60.0% | |
| GCCACAAGAGGTTGGAGACC+AGG | + | chr4.4:596458-596477 | None:intergenic | 60.0% | |
| GTTAGACCCTCACCCTGCAC+TGG | - | chr4.4:596988-597007 | MS.gene040150:intron | 60.0% | |
| TCCATGGGCCACCAACCATG+TGG | - | chr4.4:598937-598956 | MS.gene040150:intron | 60.0% | |
| !! | ACCACATGGTTGGTGGCCCA+TGG | + | chr4.4:598941-598960 | None:intergenic | 60.0% |
| AGACCCTCACCCTGCACTGG+TGG | - | chr4.4:596991-597010 | MS.gene040150:intron | 65.0% | |
| AGCTTCGAGGCCACCAGTGC+AGG | + | chr4.4:597004-597023 | None:intergenic | 65.0% | |
| AGGCCACCAGTGCAGGGTGA+GGG | + | chr4.4:596997-597016 | None:intergenic | 65.0% | |
| GCTTCGAGGCCACCAGTGCA+GGG | + | chr4.4:597003-597022 | None:intergenic | 65.0% | |
| GAGGCCACCAGTGCAGGGTG+AGG | + | chr4.4:596998-597017 | None:intergenic | 70.0% | |
| GGGTGGTTGCACGTGCCTGC+CGG | + | chr4.4:596805-596824 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 596419 | 599704 | 596419 | ID=MS.gene040150 |
| chr4.4 | mRNA | 596419 | 599704 | 596419 | ID=MS.gene040150.t1;Parent=MS.gene040150 |
| chr4.4 | exon | 599612 | 599704 | 599612 | ID=MS.gene040150.t1.exon1;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 599612 | 599704 | 599612 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 599226 | 599486 | 599226 | ID=MS.gene040150.t1.exon2;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 599226 | 599486 | 599226 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 598988 | 599137 | 598988 | ID=MS.gene040150.t1.exon3;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 598988 | 599137 | 598988 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 598551 | 598684 | 598551 | ID=MS.gene040150.t1.exon4;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 598551 | 598684 | 598551 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 597999 | 598212 | 597999 | ID=MS.gene040150.t1.exon5;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 597999 | 598212 | 597999 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 597745 | 597890 | 597745 | ID=MS.gene040150.t1.exon6;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 597745 | 597890 | 597745 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 597414 | 597641 | 597414 | ID=MS.gene040150.t1.exon7;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 597414 | 597641 | 597414 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 597060 | 597262 | 597060 | ID=MS.gene040150.t1.exon8;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 597060 | 597262 | 597060 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 596726 | 596969 | 596726 | ID=MS.gene040150.t1.exon9;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 596726 | 596969 | 596726 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| chr4.4 | exon | 596419 | 596635 | 596419 | ID=MS.gene040150.t1.exon10;Parent=MS.gene040150.t1 |
| chr4.4 | CDS | 596419 | 596635 | 596419 | ID=cds.MS.gene040150.t1;Parent=MS.gene040150.t1 |
| Gene Sequence |
| Protein sequence |
