Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20637.t1 | XP_024641666.1 | 93.5 | 643 | 42 | 0 | 1 | 643 | 1 | 643 | 0.00E+00 | 1229.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20637.t1 | Q9SGH6 | 71.5 | 636 | 180 | 1 | 9 | 643 | 4 | 639 | 1.2e-277 | 956.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20637.t1 | A0A072U5H0 | 93.2 | 603 | 41 | 0 | 41 | 643 | 19 | 621 | 0.0e+00 | 1152.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050384 | MS.gene20637 | 0.800118 | 1.67E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene20637 | 0.821333 | 4.27E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene20637 | 0.814794 | 1.29E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene20637 | 0.817159 | 3.81E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene20637 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene20637 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene20637 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene20637 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene20637 | 0.842984 | 1.85E-58 | -1.69E-46 |
| MS.gene054554 | MS.gene20637 | 0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene20637 | 0.802505 | 5.43E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene20637 | 0.826402 | 2.77E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93781 | MS.gene20637 | PPI |
| MS.gene040150 | MS.gene20637 | PPI |
| MS.gene62619 | MS.gene20637 | PPI |
| MS.gene95891 | MS.gene20637 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20637.t1 | MTR_6g007770 | 94.693 | 603 | 32 | 0 | 41 | 643 | 19 | 621 | 0.0 | 1194 |
| MS.gene20637.t1 | MTR_6g007767 | 81.804 | 643 | 117 | 0 | 1 | 643 | 1 | 643 | 0.0 | 1132 |
| MS.gene20637.t1 | MTR_6g007763 | 79.257 | 646 | 129 | 3 | 1 | 643 | 1 | 644 | 0.0 | 1067 |
| MS.gene20637.t1 | MTR_6g007767 | 81.547 | 569 | 105 | 0 | 1 | 569 | 1 | 569 | 0.0 | 996 |
| MS.gene20637.t1 | MTR_6g007767 | 83.268 | 508 | 85 | 0 | 136 | 643 | 1 | 508 | 0.0 | 903 |
| MS.gene20637.t1 | MTR_8g106800 | 63.183 | 622 | 222 | 2 | 22 | 640 | 12 | 629 | 0.0 | 799 |
| MS.gene20637.t1 | MTR_6g007767 | 80.952 | 420 | 80 | 0 | 1 | 420 | 1 | 420 | 0.0 | 744 |
| MS.gene20637.t1 | MTR_6g007767 | 80.523 | 421 | 82 | 0 | 1 | 421 | 1 | 421 | 0.0 | 742 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20637.t1 | AT3G01420 | 72.327 | 636 | 175 | 1 | 9 | 643 | 4 | 639 | 0.0 | 971 |
| MS.gene20637.t1 | AT1G73680 | 64.677 | 620 | 217 | 2 | 21 | 640 | 11 | 628 | 0.0 | 832 |
| MS.gene20637.t1 | AT1G73680 | 63.434 | 629 | 219 | 4 | 21 | 640 | 11 | 637 | 0.0 | 818 |
| MS.gene20637.t1 | AT1G73680 | 66.023 | 518 | 175 | 1 | 123 | 640 | 3 | 519 | 0.0 | 711 |
| MS.gene20637.t1 | AT1G73680 | 66.737 | 475 | 157 | 1 | 166 | 640 | 1 | 474 | 0.0 | 662 |
Find 151 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTCATGGAAATCTTTA+TGG | 0.101346 | 6.3:-3904199 | None:intergenic |
| TTGCTACTCCATCTTCATTT+TGG | 0.160377 | 6.3:-3906663 | None:intergenic |
| TTTATTTAGGTATGGATTAT+TGG | 0.165781 | 6.3:+3907351 | MS.gene20637:intron |
| TCTCTTGGGCCTATTGTATT+TGG | 0.181493 | 6.3:+3905008 | MS.gene20637:CDS |
| CTTCAAGTGCTTTCTCTGTT+TGG | 0.185040 | 6.3:+3909144 | MS.gene20637:CDS |
| CATTGTGTTCTTGAATAAAA+AGG | 0.197269 | 6.3:-3906735 | None:intergenic |
| TATTGATACCTATTTCAAAA+TGG | 0.222014 | 6.3:+3908469 | MS.gene20637:CDS |
| GGCTGGTGTCTCAACTTTGC+AGG | 0.228515 | 6.3:+3906711 | MS.gene20637:CDS |
| GGAATTGGATTGTCTTTGTT+TGG | 0.229305 | 6.3:-3909176 | None:intergenic |
| TGCAAGAGCATTAGTGTCTA+TGG | 0.246157 | 6.3:+3908168 | MS.gene20637:CDS |
| GAATTGGATTGTCTTTGTTT+GGG | 0.253532 | 6.3:-3909175 | None:intergenic |
| GTTCTATATGGATAATCATT+AGG | 0.263833 | 6.3:-3905105 | None:intergenic |
| TTATTTAGGTATGGATTATT+GGG | 0.264621 | 6.3:+3907352 | MS.gene20637:intron |
| TTCAAGTGCTTTCTCTGTTT+GGG | 0.278891 | 6.3:+3909145 | MS.gene20637:CDS |
| TCTTCTGAATTGGTTATATC+TGG | 0.284000 | 6.3:-3908439 | None:intergenic |
| AATTCTTCAGTTAGAGAGTA+TGG | 0.287850 | 6.3:-3907463 | None:intergenic |
| GAAGATGGAGTAGCAATTTC+AGG | 0.292686 | 6.3:+3906670 | MS.gene20637:CDS |
| TAATAAATGATGCAGTTTAT+AGG | 0.295800 | 6.3:+3908397 | MS.gene20637:intron |
| TATTGTAACAAGATTTCTAA+TGG | 0.300529 | 6.3:-3904159 | None:intergenic |
| TGAGGAGACATACACCAAAA+AGG | 0.300584 | 6.3:+3909037 | MS.gene20637:CDS |
| GCACCGTTTACCTGTTCTCT+TGG | 0.305249 | 6.3:+3904993 | MS.gene20637:CDS |
| AAAACTGACACTTTGCTTGC+AGG | 0.315806 | 6.3:+3906982 | MS.gene20637:CDS |
| TTTCCATCAGCAGTTCTATA+TGG | 0.317935 | 6.3:-3905117 | None:intergenic |
| ATGGATAGTTTCCAAGTGTT+AGG | 0.324477 | 6.3:-3908210 | None:intergenic |
| ATAATAATGCTCTTCTGAAT+TGG | 0.331174 | 6.3:-3908449 | None:intergenic |
| CATCTATGTTCTGTGGTACT+AGG | 0.336758 | 6.3:-3908246 | None:intergenic |
| AATAAATGATGCAGTTTATA+GGG | 0.338380 | 6.3:+3908398 | MS.gene20637:intron |
| GGTGGTGGCCACAAAACTTT+TGG | 0.347715 | 6.3:+3905453 | MS.gene20637:CDS |
| TTGCAGGCATGCGTGGAAAT+TGG | 0.352398 | 6.3:+3906998 | MS.gene20637:CDS |
| GAACACAACTGAAAGTTTAA+AGG | 0.353592 | 6.3:+3909073 | MS.gene20637:CDS |
| ATACGAAGATAAAGTGGAAT+TGG | 0.356112 | 6.3:-3909191 | None:intergenic |
| GACAAACAGCTGTAGGAGTT+AGG | 0.366038 | 6.3:+3905076 | MS.gene20637:CDS |
| AAGAAATTCAAGGACACGTT+TGG | 0.370488 | 6.3:+3907376 | MS.gene20637:CDS |
| TTCTATATGGATAATCATTA+GGG | 0.374278 | 6.3:-3905104 | None:intergenic |
| TCTATGGGTCATCAAACTTC+TGG | 0.375181 | 6.3:+3908184 | MS.gene20637:CDS |
| CAGGTGATGTTCGTAATAGT+TGG | 0.375562 | 6.3:+3906689 | MS.gene20637:CDS |
| CCATTGACAAGCTTGGAATA+TGG | 0.378143 | 6.3:+3904971 | MS.gene20637:CDS |
| TTGGCATACTCTTTGATTAG+TGG | 0.381268 | 6.3:-3907574 | None:intergenic |
| AGGGATGGAAGTGTGATATA+TGG | 0.381936 | 6.3:+3906562 | MS.gene20637:intron |
| TTCAATTTATGATACATGAT+TGG | 0.382105 | 6.3:+3905533 | MS.gene20637:CDS |
| GAAGGAGGCTAGAGGCTGAT+AGG | 0.395767 | 6.3:+3908994 | MS.gene20637:intron |
| AAAGTATTGGAAGAGGTATA+TGG | 0.396188 | 6.3:+3908522 | MS.gene20637:CDS |
| ACATGATTGGATAGACCATT+TGG | 0.400463 | 6.3:+3905546 | MS.gene20637:CDS |
| GTGGCCACCACCATAGGGTC+TGG | 0.404951 | 6.3:-3905442 | None:intergenic |
| CAAAGATTCACACTATAGAT+TGG | 0.406140 | 6.3:+3906944 | MS.gene20637:CDS |
| GGAAGTCAAGGGTCTTTCAT+TGG | 0.407694 | 6.3:+3905168 | MS.gene20637:CDS |
| TCTTTACCGCCATGCTAGAT+TGG | 0.408691 | 6.3:+3906903 | MS.gene20637:CDS |
| CACCGTTTACCTGTTCTCTT+GGG | 0.408694 | 6.3:+3904994 | MS.gene20637:CDS |
| CTTAGTCAAATTGATTAACT+AGG | 0.410409 | 6.3:-3909215 | None:intergenic |
| AAGAATTTGTCAGTGTCTAT+AGG | 0.411562 | 6.3:+3907479 | MS.gene20637:CDS |
| ATTGATACCTATTTCAAAAT+GGG | 0.416616 | 6.3:+3908470 | MS.gene20637:CDS |
| CATGGCAGAGAAGAAGATAA+AGG | 0.425013 | 6.3:+3908581 | MS.gene20637:CDS |
| TCTCTCAAATGCAAAGAATC+AGG | 0.426183 | 6.3:-3907517 | None:intergenic |
| ATTGTAACAAGATTTCTAAT+GGG | 0.427560 | 6.3:-3904158 | None:intergenic |
| GGAAGATTTGACAGATGATA+AGG | 0.428815 | 6.3:+3908491 | MS.gene20637:CDS |
| CATGTTGGTGACGCTATCTT+AGG | 0.437122 | 6.3:+3907400 | MS.gene20637:CDS |
| AGGTGATGTTCGTAATAGTT+GGG | 0.441309 | 6.3:+3906690 | MS.gene20637:CDS |
| CGTTGAAGAGGTTGTATTGT+TGG | 0.442142 | 6.3:-3905050 | None:intergenic |
| TACAATAGGCCCAAGAGAAC+AGG | 0.445679 | 6.3:-3905003 | None:intergenic |
| CCATTTGGAGGACACTAATC+AGG | 0.454160 | 6.3:+3905561 | MS.gene20637:CDS |
| CGCTATCTTAGGTGGATTGG+TGG | 0.458715 | 6.3:+3907411 | MS.gene20637:CDS |
| ATTCCTATGAATGATCTGAT+TGG | 0.459502 | 6.3:+3908109 | MS.gene20637:CDS |
| TTCCAGCACTTTCATTGAAA+GGG | 0.464817 | 6.3:-3905149 | None:intergenic |
| ATTCACTCCATTGACAAGCT+TGG | 0.465544 | 6.3:+3904964 | MS.gene20637:CDS |
| CTTCCAGCACTTTCATTGAA+AGG | 0.467301 | 6.3:-3905150 | None:intergenic |
| GGTTGTATTGTTGGTGAAGA+TGG | 0.472509 | 6.3:-3905041 | None:intergenic |
| TAAGGAAGTAATCAAAGTAT+TGG | 0.476469 | 6.3:+3908509 | MS.gene20637:CDS |
| GTCTAATGGCCAAATACAAT+AGG | 0.476494 | 6.3:-3905017 | None:intergenic |
| GACCCTTTCAATGAAAGTGC+TGG | 0.479861 | 6.3:+3905147 | MS.gene20637:CDS |
| GAAAAGAAAAGCATCTATGA+TGG | 0.487650 | 6.3:-3904234 | None:intergenic |
| CTAGTACCACAGAACATAGA+TGG | 0.488409 | 6.3:+3908247 | MS.gene20637:CDS |
| ACTTTATTAGAAGGAATATC+CGG | 0.488477 | 6.3:+3906864 | MS.gene20637:intron |
| AGTCCAATCAGATCATTCAT+AGG | 0.489257 | 6.3:-3908112 | None:intergenic |
| TATTCCTTGTCATGGCATCT+AGG | 0.490057 | 6.3:+3908634 | MS.gene20637:CDS |
| CCATATTCCAAGCTTGTCAA+TGG | 0.491674 | 6.3:-3904971 | None:intergenic |
| TGGATAGTTTCCAAGTGTTA+GGG | 0.492607 | 6.3:-3908209 | None:intergenic |
| ACTTCTGGTGCCCTAACACT+TGG | 0.493264 | 6.3:+3908199 | MS.gene20637:CDS |
| ATGGCAGAGAAGAAGATAAA+GGG | 0.494420 | 6.3:+3908582 | MS.gene20637:CDS |
| ACTAGGTTTCTGAGAAATGA+TGG | 0.495166 | 6.3:-3908229 | None:intergenic |
| AATTGGATTGTCTTTGTTTG+GGG | 0.496370 | 6.3:-3909174 | None:intergenic |
| ACCTTGTCCTTCTGATCCAC+AGG | 0.498358 | 6.3:-3905204 | None:intergenic |
| AGATCTTCATCTTCCAAGTC+CGG | 0.500138 | 6.3:-3906883 | None:intergenic |
| ACCCTAATCCAAAATGAAGA+TGG | 0.502805 | 6.3:+3906655 | MS.gene20637:CDS |
| TCAATGTGTTAGCAGCTGCT+TGG | 0.503391 | 6.3:+3905509 | MS.gene20637:CDS |
| GGCCCAAGAGAACAGGTAAA+CGG | 0.506089 | 6.3:-3904996 | None:intergenic |
| TGAATTGTTTCCCATTGCCC+TGG | 0.506808 | 6.3:-3905489 | None:intergenic |
| CTGTTTGTCCAACGTTGAAG+AGG | 0.509107 | 6.3:-3905062 | None:intergenic |
| AATGAAAGTGCTGGAAGTCA+AGG | 0.509134 | 6.3:+3905156 | MS.gene20637:CDS |
| CCTGATTAGTGTCCTCCAAA+TGG | 0.509333 | 6.3:-3905561 | None:intergenic |
| TTAGAAGGAATATCCGGACT+TGG | 0.511639 | 6.3:+3906870 | MS.gene20637:intron |
| ACAAACAGCTGTAGGAGTTA+GGG | 0.512018 | 6.3:+3905077 | MS.gene20637:CDS |
| CTAGGAATACGAAGATAAAG+TGG | 0.513359 | 6.3:-3909197 | None:intergenic |
| ATTATTGGGGAAGAAATTCA+AGG | 0.514441 | 6.3:+3907366 | MS.gene20637:CDS |
| GTTGTTGAAGCCAGACCCTA+TGG | 0.516727 | 6.3:+3905432 | MS.gene20637:intron |
| GCATACTCTTTGATTAGTGG+TGG | 0.519980 | 6.3:-3907571 | None:intergenic |
| GTGATTGATCGTCACCATCC+AGG | 0.520313 | 6.3:+3909098 | MS.gene20637:CDS |
| AAGACAAAGGAAATTCCAAC+GGG | 0.522014 | 6.3:+3905829 | MS.gene20637:CDS |
| AGTAATCAAAGTATTGGAAG+AGG | 0.523415 | 6.3:+3908515 | MS.gene20637:CDS |
| GCAAGAGCATTAGTGTCTAT+GGG | 0.528313 | 6.3:+3908169 | MS.gene20637:CDS |
| TGACGCTATCTTAGGTGGAT+TGG | 0.529693 | 6.3:+3907408 | MS.gene20637:CDS |
| ATGAATAAAGCAGATAATCA+TGG | 0.533460 | 6.3:+3907436 | MS.gene20637:CDS |
| TGCAAATCCTATTGATGACA+AGG | 0.535889 | 6.3:-3908149 | None:intergenic |
| TATCCATATAGAACTGCTGA+TGG | 0.540566 | 6.3:+3905114 | MS.gene20637:CDS |
| TTCATGGAAATCTTTATGGA+AGG | 0.547176 | 6.3:-3904195 | None:intergenic |
| TATTCTTCCTGTGGATCAGA+AGG | 0.548821 | 6.3:+3905197 | MS.gene20637:CDS |
| CAATACAACCTCTTCAACGT+TGG | 0.548944 | 6.3:+3905054 | MS.gene20637:CDS |
| TGCTGTTTGTGATGCTCTCA+AGG | 0.550296 | 6.3:+3906756 | MS.gene20637:CDS |
| TTGGTGAAGATGGCGTCTAA+TGG | 0.550915 | 6.3:-3905031 | None:intergenic |
| AGTGTGAGGACTTTCAAAGA+TGG | 0.553993 | 6.3:+3906607 | MS.gene20637:CDS |
| AATGATCTGATTGGACTACC+AGG | 0.562984 | 6.3:+3908118 | MS.gene20637:CDS |
| ACTTTGCTTGCAGGCATGCG+TGG | 0.565616 | 6.3:+3906991 | MS.gene20637:CDS |
| GTGTGAGGACTTTCAAAGAT+GGG | 0.567956 | 6.3:+3906608 | MS.gene20637:CDS |
| AGAGATATATCTGCCACCCC+AGG | 0.569935 | 6.3:+3907535 | MS.gene20637:CDS |
| ATTCAAGTTCTTGAAGACAA+AGG | 0.574896 | 6.3:+3905816 | MS.gene20637:CDS |
| ATTCTTACCACCAAGGTGTA+CGG | 0.577040 | 6.3:-3905885 | None:intergenic |
| TGATTGGATAGACCATTTGG+AGG | 0.577305 | 6.3:+3905549 | MS.gene20637:CDS |
| AAGGACACGTTTGGACATGT+TGG | 0.577672 | 6.3:+3907385 | MS.gene20637:CDS |
| TGGAAGAAATATTCTTCCTG+TGG | 0.579019 | 6.3:+3905188 | MS.gene20637:CDS |
| GTTGGTGACGCTATCTTAGG+TGG | 0.581025 | 6.3:+3907403 | MS.gene20637:CDS |
| CAGTTTATAGGGATAGAGAG+AGG | 0.581334 | 6.3:+3908409 | MS.gene20637:intron |
| GATGTTCGTAATAGTTGGGC+TGG | 0.581972 | 6.3:+3906694 | MS.gene20637:CDS |
| TTGATCTGATAGAAACCCGT+TGG | 0.590712 | 6.3:-3905844 | None:intergenic |
| TCTGTGCCATCTATGTTCTG+TGG | 0.595744 | 6.3:-3908253 | None:intergenic |
| CATTGGCTTGCAACTTCACG+TGG | 0.599180 | 6.3:-3905781 | None:intergenic |
| CAAACATCCGTACACCTTGG+TGG | 0.599441 | 6.3:+3905878 | MS.gene20637:CDS |
| TATTTAGGTATGGATTATTG+GGG | 0.600656 | 6.3:+3907353 | MS.gene20637:intron |
| GGTATATGGCAATGATGTTG+AGG | 0.601911 | 6.3:+3908536 | MS.gene20637:CDS |
| TGATACACTAGTGGGTCTCA+TGG | 0.602913 | 6.3:+3908563 | MS.gene20637:CDS |
| GAAGACAAAGGAAATTCCAA+CGG | 0.603567 | 6.3:+3905828 | MS.gene20637:CDS |
| CACAGAAAGATCTGATCATG+TGG | 0.608280 | 6.3:+3908270 | MS.gene20637:CDS |
| ATGAAAGTGCTGGAAGTCAA+GGG | 0.608733 | 6.3:+3905157 | MS.gene20637:CDS |
| GAGGAGCTTGATACACTAGT+GGG | 0.609778 | 6.3:+3908555 | MS.gene20637:CDS |
| ATGCAAACATCCGTACACCT+TGG | 0.610700 | 6.3:+3905875 | MS.gene20637:CDS |
| ATCCAGGAATGACAGAAAAG+TGG | 0.610750 | 6.3:+3909114 | MS.gene20637:CDS |
| GCTATCTTAGGTGGATTGGT+GGG | 0.616010 | 6.3:+3907412 | MS.gene20637:CDS |
| TGCACTTTGAAGGAGGCTAG+AGG | 0.616682 | 6.3:+3908986 | MS.gene20637:intron |
| TCAAATGCAAAGAATCAGGT+AGG | 0.617720 | 6.3:-3907513 | None:intergenic |
| CTGAAGTCACCAATCTAGCA+TGG | 0.617787 | 6.3:-3906912 | None:intergenic |
| GAAGCCAGACCCTATGGTGG+TGG | 0.622175 | 6.3:+3905438 | MS.gene20637:CDS |
| ATTGGATTGTCTTTGTTTGG+GGG | 0.624854 | 6.3:-3909173 | None:intergenic |
| TTTCACAAGCAACTTCAATG+AGG | 0.625396 | 6.3:+3909019 | MS.gene20637:CDS |
| TCCTGTGGATCAGAAGGACA+AGG | 0.625807 | 6.3:+3905203 | MS.gene20637:CDS |
| TTTACCTAGATGCCATGACA+AGG | 0.626815 | 6.3:-3908638 | None:intergenic |
| TGAGGAGCTTGATACACTAG+TGG | 0.630078 | 6.3:+3908554 | MS.gene20637:CDS |
| GGTTTCTATCAGATCAAGAG+TGG | 0.632501 | 6.3:+3905850 | MS.gene20637:CDS |
| AACGTTGGACAAACAGCTGT+AGG | 0.633142 | 6.3:+3905069 | MS.gene20637:CDS |
| GGAAAATATTCTTACCACCA+AGG | 0.641196 | 6.3:-3905892 | None:intergenic |
| AAGATCTGATCATGTGGACA+TGG | 0.657118 | 6.3:+3908276 | MS.gene20637:CDS |
| GTTGAAGCCAGACCCTATGG+TGG | 0.716852 | 6.3:+3905435 | MS.gene20637:CDS |
| TCACACTATAGATTGGACTG+TGG | 0.742224 | 6.3:+3906951 | MS.gene20637:CDS |
| AAGTCACCAATCTAGCATGG+CGG | 0.759736 | 6.3:-3906909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATGAAATTAAATAAATAA+AGG | + | chr6.3:3907921-3907940 | MS.gene20637:intron | 10.0% |
| !!! | CAAAAAAATTGATTTTATTT+AGG | + | chr6.3:3907338-3907357 | MS.gene20637:intron | 10.0% |
| !!! | TTTAATTTGTTAAAAAATGA+AGG | - | chr6.3:3906343-3906362 | None:intergenic | 10.0% |
| !! | AAAATTGCAAAATTTCAAAT+GGG | - | chr6.3:3907644-3907663 | None:intergenic | 15.0% |
| !! | AAATATCTCAAATATTATGA+AGG | - | chr6.3:3908704-3908723 | None:intergenic | 15.0% |
| !! | AATTACTAAACAAAATTAGA+TGG | - | chr6.3:3906462-3906481 | None:intergenic | 15.0% |
| !! | ATAAAATAATTATACACGAA+CGG | - | chr6.3:3907090-3907109 | None:intergenic | 15.0% |
| !! | ATCAACTTTAAATAATATGA+TGG | + | chr6.3:3905598-3905617 | MS.gene20637:intron | 15.0% |
| !! | ATTATATATATGTCACTATA+GGG | - | chr6.3:3904644-3904663 | None:intergenic | 15.0% |
| !! | ATTTAATTAGTATACTTTGT+AGG | - | chr6.3:3907218-3907237 | None:intergenic | 15.0% |
| !! | CTTAATAATAAACATACATA+GGG | + | chr6.3:3904306-3904325 | MS.gene20637:intron | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+TGG | - | chr6.3:3907684-3907703 | None:intergenic | 15.0% |
| !! | TTACTATACTTATATTGTTT+AGG | - | chr6.3:3907283-3907302 | None:intergenic | 15.0% |
| !!! | AAATCAATTTTTTTGAAACA+TGG | - | chr6.3:3907333-3907352 | None:intergenic | 15.0% |
| !!! | AAATTGATTTTATTTAGGTA+TGG | + | chr6.3:3907343-3907362 | MS.gene20637:intron | 15.0% |
| !!! | AATAAATAAAGGTATAATAG+CGG | + | chr6.3:3907932-3907951 | MS.gene20637:intron | 15.0% |
| !!! | ATAAGTTTTTTTACACTTTT+AGG | + | chr6.3:3904367-3904386 | MS.gene20637:intron | 15.0% |
| !!! | CTAAAAAATGTTATATCTTT+TGG | + | chr6.3:3908075-3908094 | MS.gene20637:intron | 15.0% |
| !!! | CTATATGAAATTCTTTTTAA+TGG | + | chr6.3:3904929-3904948 | MS.gene20637:intron | 15.0% |
| !!! | TAAGTTTTTTTACACTTTTA+GGG | + | chr6.3:3904368-3904387 | MS.gene20637:intron | 15.0% |
| !!! | TATAGTCTTAAAAAGTTTTA+GGG | - | chr6.3:3905389-3905408 | None:intergenic | 15.0% |
| !!! | TCTTGTTTTATATGATTTTT+GGG | + | chr6.3:3906142-3906161 | MS.gene20637:intron | 15.0% |
| !!! | TTCTTGTTTTATATGATTTT+TGG | + | chr6.3:3906141-3906160 | MS.gene20637:intron | 15.0% |
| !!! | TTTTATTGTACTTTATTAGA+AGG | + | chr6.3:3906855-3906874 | MS.gene20637:intron | 15.0% |
| !!! | TTTTCAAAAAATAAAAAGTG+TGG | + | chr6.3:3905342-3905361 | MS.gene20637:intron | 15.0% |
| !! | AACTTTAAATAATATGATGG+TGG | + | chr6.3:3905601-3905620 | MS.gene20637:intron | 20.0% |
| !! | AAGTTAAAAATATCAAAGGA+TGG | + | chr6.3:3906631-3906650 | MS.gene20637:CDS | 20.0% |
| !! | AATAAATGATGCAGTTTATA+GGG | + | chr6.3:3908398-3908417 | MS.gene20637:intron | 20.0% |
| !! | AATAAGTTATTTATCCAAGT+AGG | + | chr6.3:3904590-3904609 | MS.gene20637:intron | 20.0% |
| !! | AATTTCATATAGTTAGTTAG+AGG | - | chr6.3:3904921-3904940 | None:intergenic | 20.0% |
| !! | ACTTTAGTTAAGAGAATATT+TGG | + | chr6.3:3905279-3905298 | MS.gene20637:intron | 20.0% |
| !! | ATTGATACCTATTTCAAAAT+GGG | + | chr6.3:3908470-3908489 | MS.gene20637:CDS | 20.0% |
| !! | ATTGTAACAAGATTTCTAAT+GGG | - | chr6.3:3904161-3904180 | None:intergenic | 20.0% |
| !! | ATTGTGTTCTTGAATAAAAA+GGG | - | chr6.3:3906737-3906756 | None:intergenic | 20.0% |
| !! | CAAAATTGCAAAATTTCAAA+TGG | - | chr6.3:3907645-3907664 | None:intergenic | 20.0% |
| !! | CATGAAACTATATGATAAAA+GGG | + | chr6.3:3906543-3906562 | MS.gene20637:intron | 20.0% |
| !! | CCTATGTATGTTTATTATTA+AGG | - | chr6.3:3904308-3904327 | None:intergenic | 20.0% |
| !! | CCTTAATAATAAACATACAT+AGG | + | chr6.3:3904305-3904324 | MS.gene20637:intron | 20.0% |
| !! | CTAGTAAAATAAACACATTA+TGG | + | chr6.3:3908946-3908965 | MS.gene20637:intron | 20.0% |
| !! | GATTATATATATGTCACTAT+AGG | - | chr6.3:3904645-3904664 | None:intergenic | 20.0% |
| !! | TAATAAATGATGCAGTTTAT+AGG | + | chr6.3:3908397-3908416 | MS.gene20637:intron | 20.0% |
| !! | TATTGATACCTATTTCAAAA+TGG | + | chr6.3:3908469-3908488 | MS.gene20637:CDS | 20.0% |
| !! | TATTGTAACAAGATTTCTAA+TGG | - | chr6.3:3904162-3904181 | None:intergenic | 20.0% |
| !! | TCAATTAATGCTTATGTATA+TGG | - | chr6.3:3905916-3905935 | None:intergenic | 20.0% |
| !! | TGTATGTTTATTATTAAGGA+AGG | - | chr6.3:3904304-3904323 | None:intergenic | 20.0% |
| !! | TTCAATTTATGATACATGAT+TGG | + | chr6.3:3905533-3905552 | MS.gene20637:CDS | 20.0% |
| !! | TTCTATATGGATAATCATTA+GGG | - | chr6.3:3905107-3905126 | None:intergenic | 20.0% |
| !!! | AATGTTGTTTTTATGTATCT+AGG | + | chr6.3:3906435-3906454 | MS.gene20637:intron | 20.0% |
| !!! | ACTCAATTTTGCTAAAATAA+TGG | - | chr6.3:3904620-3904639 | None:intergenic | 20.0% |
| !!! | ACTTTTTAAGACTATACAAT+TGG | + | chr6.3:3905393-3905412 | MS.gene20637:intron | 20.0% |
| !!! | CAGTTTTAAAAATCAAACAT+TGG | + | chr6.3:3906293-3906312 | MS.gene20637:intron | 20.0% |
| !!! | CTTGTTTTATATGATTTTTG+GGG | + | chr6.3:3906143-3906162 | MS.gene20637:intron | 20.0% |
| !!! | GTATAGTCTTAAAAAGTTTT+AGG | - | chr6.3:3905390-3905409 | None:intergenic | 20.0% |
| !!! | TAATTTTTATACAGTTCTCA+AGG | + | chr6.3:3908872-3908891 | MS.gene20637:intron | 20.0% |
| !!! | TATATCTTTTGGTATTATAC+AGG | + | chr6.3:3908086-3908105 | MS.gene20637:intron | 20.0% |
| !!! | TGATTTTTAAAACTGTTTCA+GGG | - | chr6.3:3906288-3906307 | None:intergenic | 20.0% |
| !!! | TTAATTTGATGCATATAGTT+AGG | - | chr6.3:3906792-3906811 | None:intergenic | 20.0% |
| !!! | TTATTTAGGTATGGATTATT+GGG | + | chr6.3:3907352-3907371 | MS.gene20637:intron | 20.0% |
| !!! | TTGATTTTTAAAACTGTTTC+AGG | - | chr6.3:3906289-3906308 | None:intergenic | 20.0% |
| !!! | TTGTTTTATATGATTTTTGG+GGG | + | chr6.3:3906144-3906163 | MS.gene20637:intron | 20.0% |
| !!! | TTTATTTAGGTATGGATTAT+TGG | + | chr6.3:3907351-3907370 | MS.gene20637:intron | 20.0% |
| !!! | TTTTTCATCATAAGCTATTT+TGG | - | chr6.3:3904462-3904481 | None:intergenic | 20.0% |
| ! | AAACTATATGATAAAAGGGA+TGG | + | chr6.3:3906547-3906566 | MS.gene20637:intron | 25.0% |
| ! | AAACTCGAAAAATTAACTAG+AGG | - | chr6.3:3907055-3907074 | None:intergenic | 25.0% |
| ! | AAATATGGTCAAAGTAAGTT+AGG | - | chr6.3:3907669-3907688 | None:intergenic | 25.0% |
| ! | AACTCGAAAAATTAACTAGA+GGG | - | chr6.3:3907054-3907073 | None:intergenic | 25.0% |
| ! | ACCTTTATTAACTGTATTAG+TGG | + | chr6.3:3907886-3907905 | MS.gene20637:intron | 25.0% |
| ! | ACTTTATTAGAAGGAATATC+CGG | + | chr6.3:3906864-3906883 | MS.gene20637:intron | 25.0% |
| ! | ACTTTGTAAACTCAAGATAA+AGG | - | chr6.3:3906371-3906390 | None:intergenic | 25.0% |
| ! | ATAATAATGCTCTTCTGAAT+TGG | - | chr6.3:3908452-3908471 | None:intergenic | 25.0% |
| ! | ATATGTTTATCTTCATTCTG+CGG | + | chr6.3:3904745-3904764 | MS.gene20637:intron | 25.0% |
| ! | ATCCATATATGATTGAAGAA+TGG | + | chr6.3:3905944-3905963 | MS.gene20637:intron | 25.0% |
| ! | ATGAATAAAGCAGATAATCA+TGG | + | chr6.3:3907436-3907455 | MS.gene20637:CDS | 25.0% |
| ! | CATTGTGTTCTTGAATAAAA+AGG | - | chr6.3:3906738-3906757 | None:intergenic | 25.0% |
| ! | CTTTGTAAACTCAAGATAAA+GGG | - | chr6.3:3906370-3906389 | None:intergenic | 25.0% |
| ! | GCATGAAACTATATGATAAA+AGG | + | chr6.3:3906542-3906561 | MS.gene20637:intron | 25.0% |
| ! | GTTCTATATGGATAATCATT+AGG | - | chr6.3:3905108-3905127 | None:intergenic | 25.0% |
| ! | TAAGGAAGTAATCAAAGTAT+TGG | + | chr6.3:3908509-3908528 | MS.gene20637:CDS | 25.0% |
| ! | TATATAATCACAAGTCATGT+AGG | + | chr6.3:3904656-3904675 | MS.gene20637:intron | 25.0% |
| ! | TCCACTAATACAGTTAATAA+AGG | - | chr6.3:3907890-3907909 | None:intergenic | 25.0% |
| ! | TGGGAAGTTAAAAATATCAA+AGG | + | chr6.3:3906627-3906646 | MS.gene20637:CDS | 25.0% |
| ! | TGTTTATTATTAAGGAAGGA+AGG | - | chr6.3:3904300-3904319 | None:intergenic | 25.0% |
| ! | TTAAGCTCAAAATTATGCAT+TGG | + | chr6.3:3907805-3907824 | MS.gene20637:intron | 25.0% |
| ! | TTCCATTCTTCAATCATATA+TGG | - | chr6.3:3905949-3905968 | None:intergenic | 25.0% |
| !! | AAGAACTTGAATGATTTTAG+TGG | - | chr6.3:3905808-3905827 | None:intergenic | 25.0% |
| !! | AGTTAATGACCATTTTACAA+CGG | + | chr6.3:3905991-3906010 | MS.gene20637:intron | 25.0% |
| !! | ATGCACAAAGTATTATACTA+GGG | + | chr6.3:3908908-3908927 | MS.gene20637:intron | 25.0% |
| !! | ATGTTGGTGCAAAAATATTT+TGG | - | chr6.3:3907596-3907615 | None:intergenic | 25.0% |
| !! | TATTTAGGTATGGATTATTG+GGG | + | chr6.3:3907353-3907372 | MS.gene20637:intron | 25.0% |
| !! | TTTTGTAATATTCCTTGTCA+TGG | + | chr6.3:3908626-3908645 | MS.gene20637:CDS | 25.0% |
| !!! | AAATCTTCCCATTTTGAAAT+AGG | - | chr6.3:3908480-3908499 | None:intergenic | 25.0% |
| !!! | TTCCTATTGATTTGAAACTA+TGG | + | chr6.3:3906399-3906418 | MS.gene20637:intron | 25.0% |
| AAAATAATGGTATGCCTACT+TGG | - | chr6.3:3904607-3904626 | None:intergenic | 30.0% | |
| AAAATCAAACATTGGACAAC+TGG | + | chr6.3:3906301-3906320 | MS.gene20637:intron | 30.0% | |
| AAGAATTTGTCAGTGTCTAT+AGG | + | chr6.3:3907479-3907498 | MS.gene20637:CDS | 30.0% | |
| AATTCTTCAGTTAGAGAGTA+TGG | - | chr6.3:3907466-3907485 | None:intergenic | 30.0% | |
| ATACGAAGATAAAGTGGAAT+TGG | - | chr6.3:3909194-3909213 | None:intergenic | 30.0% | |
| ATCGACAACCAATTATCTTA+GGG | - | chr6.3:3908817-3908836 | None:intergenic | 30.0% | |
| ATTATTGGGGAAGAAATTCA+AGG | + | chr6.3:3907366-3907385 | MS.gene20637:CDS | 30.0% | |
| ATTCCTATGAATGATCTGAT+TGG | + | chr6.3:3908109-3908128 | MS.gene20637:CDS | 30.0% | |
| CAAAGATTCACACTATAGAT+TGG | + | chr6.3:3906944-3906963 | MS.gene20637:CDS | 30.0% | |
| CTACTTCATGGAAATCTTTA+TGG | - | chr6.3:3904202-3904221 | None:intergenic | 30.0% | |
| GAAAAAACCTTGTCATCAAT+AGG | + | chr6.3:3908142-3908161 | MS.gene20637:CDS | 30.0% | |
| GAACACAACTGAAAGTTTAA+AGG | + | chr6.3:3909073-3909092 | MS.gene20637:CDS | 30.0% | |
| GATTAATTACACATGTAGCA+AGG | - | chr6.3:3904799-3904818 | None:intergenic | 30.0% | |
| TACAGTTCTCAAGGAATATT+AGG | + | chr6.3:3908881-3908900 | MS.gene20637:intron | 30.0% | |
| TAGAATTCCCCTAAGATAAT+TGG | + | chr6.3:3908806-3908825 | MS.gene20637:intron | 30.0% | |
| TCTTCTGAATTGGTTATATC+TGG | - | chr6.3:3908442-3908461 | None:intergenic | 30.0% | |
| TGCCATAGTTTCAAATCAAT+AGG | - | chr6.3:3906404-3906423 | None:intergenic | 30.0% | |
| TTCATGGAAATCTTTATGGA+AGG | - | chr6.3:3904198-3904217 | None:intergenic | 30.0% | |
| ! | AATTGGATTGTCTTTGTTTG+GGG | - | chr6.3:3909177-3909196 | None:intergenic | 30.0% |
| ! | ACATTTTCTTCACTACTTCA+TGG | - | chr6.3:3904214-3904233 | None:intergenic | 30.0% |
| ! | AGTGTGGACTAAAAATGTTA+AGG | + | chr6.3:3905358-3905377 | MS.gene20637:intron | 30.0% |
| ! | ATTCAAGTTCTTGAAGACAA+AGG | + | chr6.3:3905816-3905835 | MS.gene20637:CDS | 30.0% |
| ! | CAGCATAGGACAAATTTTTA+TGG | + | chr6.3:3906107-3906126 | MS.gene20637:intron | 30.0% |
| ! | CATGCACAAAGTATTATACT+AGG | + | chr6.3:3908907-3908926 | MS.gene20637:intron | 30.0% |
| ! | GAATTGGATTGTCTTTGTTT+GGG | - | chr6.3:3909178-3909197 | None:intergenic | 30.0% |
| ! | TCCATCTTCATTTTGGATTA+GGG | - | chr6.3:3906659-3906678 | None:intergenic | 30.0% |
| ! | TTTTCTCTCCAAAAGTTTTG+TGG | - | chr6.3:3905464-3905483 | None:intergenic | 30.0% |
| !! | AAAGTATTGGAAGAGGTATA+TGG | + | chr6.3:3908522-3908541 | MS.gene20637:CDS | 30.0% |
| !! | AGTAATCAAAGTATTGGAAG+AGG | + | chr6.3:3908515-3908534 | MS.gene20637:CDS | 30.0% |
| !! | GAAAAGAAAAGCATCTATGA+TGG | - | chr6.3:3904237-3904256 | None:intergenic | 30.0% |
| !! | GGATAATATAGTTGAGTTGA+TGG | - | chr6.3:3904279-3904298 | None:intergenic | 30.0% |
| !! | GTTTTAGACAACTTATACGT+GGG | + | chr6.3:3906184-3906203 | MS.gene20637:intron | 30.0% |
| !! | TAATATAGTTGAGTTGATGG+AGG | - | chr6.3:3904276-3904295 | None:intergenic | 30.0% |
| !! | TGAATGATTTTAGTGGACAT+TGG | - | chr6.3:3905801-3905820 | None:intergenic | 30.0% |
| !! | TGTTTTAGACAACTTATACG+TGG | + | chr6.3:3906183-3906202 | MS.gene20637:intron | 30.0% |
| !!! | AAGTGGCAATTATTTTGAGA+CGG | + | chr6.3:3907987-3908006 | MS.gene20637:intron | 30.0% |
| AAGAAATTCAAGGACACGTT+TGG | + | chr6.3:3907376-3907395 | MS.gene20637:CDS | 35.0% | |
| AAGACAAAGGAAATTCCAAC+GGG | + | chr6.3:3905829-3905848 | MS.gene20637:CDS | 35.0% | |
| ACATGATTGGATAGACCATT+TGG | + | chr6.3:3905546-3905565 | MS.gene20637:CDS | 35.0% | |
| ACCCTAATCCAAAATGAAGA+TGG | + | chr6.3:3906655-3906674 | MS.gene20637:CDS | 35.0% | |
| AGGTGATGTTCGTAATAGTT+GGG | + | chr6.3:3906690-3906709 | MS.gene20637:CDS | 35.0% | |
| AGTCCAATCAGATCATTCAT+AGG | - | chr6.3:3908115-3908134 | None:intergenic | 35.0% | |
| ATATAGATATTTGCGTGTCC+TGG | + | chr6.3:3908774-3908793 | MS.gene20637:intron | 35.0% | |
| ATGGATAGTTTCCAAGTGTT+AGG | - | chr6.3:3908213-3908232 | None:intergenic | 35.0% | |
| ATGGCAGAGAAGAAGATAAA+GGG | + | chr6.3:3908582-3908601 | MS.gene20637:CDS | 35.0% | |
| CAAAAAGTTGTGTTGTGGTT+TGG | + | chr6.3:3906208-3906227 | MS.gene20637:intron | 35.0% | |
| CATCGACAACCAATTATCTT+AGG | - | chr6.3:3908818-3908837 | None:intergenic | 35.0% | |
| CTAGGAATACGAAGATAAAG+TGG | - | chr6.3:3909200-3909219 | None:intergenic | 35.0% | |
| GAAGACAAAGGAAATTCCAA+CGG | + | chr6.3:3905828-3905847 | MS.gene20637:CDS | 35.0% | |
| GGAAAATATTCTTACCACCA+AGG | - | chr6.3:3905895-3905914 | None:intergenic | 35.0% | |
| GGAAGATTTGACAGATGATA+AGG | + | chr6.3:3908491-3908510 | MS.gene20637:CDS | 35.0% | |
| GGAATTGGATTGTCTTTGTT+TGG | - | chr6.3:3909179-3909198 | None:intergenic | 35.0% | |
| GTCTAATGGCCAAATACAAT+AGG | - | chr6.3:3905020-3905039 | None:intergenic | 35.0% | |
| TATCCATATAGAACTGCTGA+TGG | + | chr6.3:3905114-3905133 | MS.gene20637:CDS | 35.0% | |
| TCAAATGCAAAGAATCAGGT+AGG | - | chr6.3:3907516-3907535 | None:intergenic | 35.0% | |
| TCAACTGGGTCATGTATTAT+GGG | + | chr6.3:3907842-3907861 | MS.gene20637:intron | 35.0% | |
| TCATTGAGACCGTTGTAAAA+TGG | - | chr6.3:3906003-3906022 | None:intergenic | 35.0% | |
| TCGACAACCAATTATCTTAG+GGG | - | chr6.3:3908816-3908835 | None:intergenic | 35.0% | |
| TCTCTCAAATGCAAAGAATC+AGG | - | chr6.3:3907520-3907539 | None:intergenic | 35.0% | |
| TGAACTTTCATGCACTTTGA+AGG | + | chr6.3:3908976-3908995 | MS.gene20637:intron | 35.0% | |
| TGGAAGAAATATTCTTCCTG+TGG | + | chr6.3:3905188-3905207 | MS.gene20637:CDS | 35.0% | |
| TGGATAGTTTCCAAGTGTTA+GGG | - | chr6.3:3908212-3908231 | None:intergenic | 35.0% | |
| TTCAAATGGGTCATCTATTG+CGG | - | chr6.3:3907631-3907650 | None:intergenic | 35.0% | |
| TTCAAGTGCTTTCTCTGTTT+GGG | + | chr6.3:3909145-3909164 | MS.gene20637:CDS | 35.0% | |
| TTCCAGCACTTTCATTGAAA+GGG | - | chr6.3:3905152-3905171 | None:intergenic | 35.0% | |
| TTGGAGAGAAAAACATTCCA+GGG | + | chr6.3:3905472-3905491 | MS.gene20637:CDS | 35.0% | |
| TTGGCATACTCTTTGATTAG+TGG | - | chr6.3:3907577-3907596 | None:intergenic | 35.0% | |
| TTTCACAAGCAACTTCAATG+AGG | + | chr6.3:3909019-3909038 | MS.gene20637:CDS | 35.0% | |
| TTTCCATCAGCAGTTCTATA+TGG | - | chr6.3:3905120-3905139 | None:intergenic | 35.0% | |
| TTTGGAGAGAAAAACATTCC+AGG | + | chr6.3:3905471-3905490 | MS.gene20637:CDS | 35.0% | |
| ! | ACTAGGTTTCTGAGAAATGA+TGG | - | chr6.3:3908232-3908251 | None:intergenic | 35.0% |
| ! | ATGCATTGGTATGCGTAATA+GGG | + | chr6.3:3907819-3907838 | MS.gene20637:intron | 35.0% |
| ! | ATTGGATTGTCTTTGTTTGG+GGG | - | chr6.3:3909176-3909195 | None:intergenic | 35.0% |
| ! | CTCCATCTTCATTTTGGATT+AGG | - | chr6.3:3906660-3906679 | None:intergenic | 35.0% |
| ! | GCTGCATTGATATTACAAAG+TGG | + | chr6.3:3907970-3907989 | MS.gene20637:intron | 35.0% |
| ! | TATGCATTGGTATGCGTAAT+AGG | + | chr6.3:3907818-3907837 | MS.gene20637:intron | 35.0% |
| ! | TGCAAATCCTATTGATGACA+AGG | - | chr6.3:3908152-3908171 | None:intergenic | 35.0% |
| ! | TTGCTACTCCATCTTCATTT+TGG | - | chr6.3:3906666-3906685 | None:intergenic | 35.0% |
| ! | TTTAAAACTGTTTCAGGGAC+AGG | - | chr6.3:3906283-3906302 | None:intergenic | 35.0% |
| !! | CAAGCAAAGTGTCAGTTTTA+AGG | - | chr6.3:3906981-3907000 | None:intergenic | 35.0% |
| !!! | AAGAAGTTTTGAACAGTGTG+AGG | + | chr6.3:3906593-3906612 | MS.gene20637:CDS | 35.0% |
| AAAACTGACACTTTGCTTGC+AGG | + | chr6.3:3906982-3907001 | MS.gene20637:CDS | 40.0% | |
| AACACAAGGCATAACAGCAT+AGG | + | chr6.3:3906093-3906112 | MS.gene20637:intron | 40.0% | |
| AAGATCTGATCATGTGGACA+TGG | + | chr6.3:3908276-3908295 | MS.gene20637:CDS | 40.0% | |
| ACAAACAGCTGTAGGAGTTA+GGG | + | chr6.3:3905077-3905096 | MS.gene20637:CDS | 40.0% | |
| ACAACGGTCTCAATGAGATT+TGG | + | chr6.3:3906007-3906026 | MS.gene20637:intron | 40.0% | |
| ACACCAAAAAGGGTTTGCAA+TGG | + | chr6.3:3909048-3909067 | MS.gene20637:CDS | 40.0% | |
| AGAAAAACATTCCAGGGCAA+TGG | + | chr6.3:3905478-3905497 | MS.gene20637:CDS | 40.0% | |
| AGATCTTCATCTTCCAAGTC+CGG | - | chr6.3:3906886-3906905 | None:intergenic | 40.0% | |
| AGTGTGAGGACTTTCAAAGA+TGG | + | chr6.3:3906607-3906626 | MS.gene20637:CDS | 40.0% | |
| ATCCAGGAATGACAGAAAAG+TGG | + | chr6.3:3909114-3909133 | MS.gene20637:CDS | 40.0% | |
| ATTCACTCCATTGACAAGCT+TGG | + | chr6.3:3904964-3904983 | MS.gene20637:CDS | 40.0% | |
| ATTCTTACCACCAAGGTGTA+CGG | - | chr6.3:3905888-3905907 | None:intergenic | 40.0% | |
| CAATACAACCTCTTCAACGT+TGG | + | chr6.3:3905054-3905073 | MS.gene20637:CDS | 40.0% | |
| CACAGAAAGATCTGATCATG+TGG | + | chr6.3:3908270-3908289 | MS.gene20637:CDS | 40.0% | |
| CACCAAAAAGGGTTTGCAAT+GGG | + | chr6.3:3909049-3909068 | MS.gene20637:CDS | 40.0% | |
| CAGGTGATGTTCGTAATAGT+TGG | + | chr6.3:3906689-3906708 | MS.gene20637:CDS | 40.0% | |
| CAGTTTATAGGGATAGAGAG+AGG | + | chr6.3:3908409-3908428 | MS.gene20637:intron | 40.0% | |
| CATCTATGTTCTGTGGTACT+AGG | - | chr6.3:3908249-3908268 | None:intergenic | 40.0% | |
| CATGGCAGAGAAGAAGATAA+AGG | + | chr6.3:3908581-3908600 | MS.gene20637:CDS | 40.0% | |
| CCATATTCCAAGCTTGTCAA+TGG | - | chr6.3:3904974-3904993 | None:intergenic | 40.0% | |
| CCATTGACAAGCTTGGAATA+TGG | + | chr6.3:3904971-3904990 | MS.gene20637:CDS | 40.0% | |
| CGTTGAAGAGGTTGTATTGT+TGG | - | chr6.3:3905053-3905072 | None:intergenic | 40.0% | |
| CTAGTACCACAGAACATAGA+TGG | + | chr6.3:3908247-3908266 | MS.gene20637:CDS | 40.0% | |
| CTTCAAGTGCTTTCTCTGTT+TGG | + | chr6.3:3909144-3909163 | MS.gene20637:CDS | 40.0% | |
| CTTCCAGCACTTTCATTGAA+AGG | - | chr6.3:3905153-3905172 | None:intergenic | 40.0% | |
| GAAAAACATTCCAGGGCAAT+GGG | + | chr6.3:3905479-3905498 | MS.gene20637:CDS | 40.0% | |
| GAAGATGGAGTAGCAATTTC+AGG | + | chr6.3:3906670-3906689 | MS.gene20637:CDS | 40.0% | |
| GAGATTTGGACTTGTGTGTT+TGG | + | chr6.3:3906021-3906040 | MS.gene20637:intron | 40.0% | |
| GAGGAGACATACACCAAAAA+GGG | + | chr6.3:3909038-3909057 | MS.gene20637:CDS | 40.0% | |
| GCATACTCTTTGATTAGTGG+TGG | - | chr6.3:3907574-3907593 | None:intergenic | 40.0% | |
| GGTATATGGCAATGATGTTG+AGG | + | chr6.3:3908536-3908555 | MS.gene20637:CDS | 40.0% | |
| GGTTTCTATCAGATCAAGAG+TGG | + | chr6.3:3905850-3905869 | MS.gene20637:CDS | 40.0% | |
| GTCAACTGGGTCATGTATTA+TGG | + | chr6.3:3907841-3907860 | MS.gene20637:intron | 40.0% | |
| GTGTGAGGACTTTCAAAGAT+GGG | + | chr6.3:3906608-3906627 | MS.gene20637:CDS | 40.0% | |
| TATGCGTAATAGGGTCAACT+GGG | + | chr6.3:3907828-3907847 | MS.gene20637:intron | 40.0% | |
| TATTCCTTGTCATGGCATCT+AGG | + | chr6.3:3908634-3908653 | MS.gene20637:CDS | 40.0% | |
| TATTCTTCCTGTGGATCAGA+AGG | + | chr6.3:3905197-3905216 | MS.gene20637:CDS | 40.0% | |
| TCAAATGGGTCATCTATTGC+GGG | - | chr6.3:3907630-3907649 | None:intergenic | 40.0% | |
| TCACACTATAGATTGGACTG+TGG | + | chr6.3:3906951-3906970 | MS.gene20637:CDS | 40.0% | |
| TCTATGGGTCATCAAACTTC+TGG | + | chr6.3:3908184-3908203 | MS.gene20637:CDS | 40.0% | |
| TCTCTTGGGCCTATTGTATT+TGG | + | chr6.3:3905008-3905027 | MS.gene20637:CDS | 40.0% | |
| TGAGGAGACATACACCAAAA+AGG | + | chr6.3:3909037-3909056 | MS.gene20637:CDS | 40.0% | |
| TGATTGGATAGACCATTTGG+AGG | + | chr6.3:3905549-3905568 | MS.gene20637:CDS | 40.0% | |
| TGGGACAAAAAGTTGTGTTG+TGG | + | chr6.3:3906203-3906222 | MS.gene20637:intron | 40.0% | |
| TTAGAAGGAATATCCGGACT+TGG | + | chr6.3:3906870-3906889 | MS.gene20637:intron | 40.0% | |
| TTGATCTGATAGAAACCCGT+TGG | - | chr6.3:3905847-3905866 | None:intergenic | 40.0% | |
| TTTACCTAGATGCCATGACA+AGG | - | chr6.3:3908641-3908660 | None:intergenic | 40.0% | |
| ! | ACTTTCATGCACTTTGAAGG+AGG | + | chr6.3:3908979-3908998 | MS.gene20637:intron | 40.0% |
| ! | ACTTTTCTGTCATTCCTGGA+TGG | - | chr6.3:3909115-3909134 | None:intergenic | 40.0% |
| ! | AGGGATGGAAGTGTGATATA+TGG | + | chr6.3:3906562-3906581 | MS.gene20637:intron | 40.0% |
| ! | GGTTGTATTGTTGGTGAAGA+TGG | - | chr6.3:3905044-3905063 | None:intergenic | 40.0% |
| !! | AACCACTTTTCTGTCATTCC+TGG | - | chr6.3:3909119-3909138 | None:intergenic | 40.0% |
| !! | AATGAAAGTGCTGGAAGTCA+AGG | + | chr6.3:3905156-3905175 | MS.gene20637:CDS | 40.0% |
| !! | ATAGTTGAGTTGATGGAGGA+GGG | - | chr6.3:3904272-3904291 | None:intergenic | 40.0% |
| !! | ATGAAAGTGCTGGAAGTCAA+GGG | + | chr6.3:3905157-3905176 | MS.gene20637:CDS | 40.0% |
| !! | GCAAGAGCATTAGTGTCTAT+GGG | + | chr6.3:3908169-3908188 | MS.gene20637:CDS | 40.0% |
| !! | TATAGTTGAGTTGATGGAGG+AGG | - | chr6.3:3904273-3904292 | None:intergenic | 40.0% |
| !! | TGCAAGAGCATTAGTGTCTA+TGG | + | chr6.3:3908168-3908187 | MS.gene20637:CDS | 40.0% |
| !!! | GTGGAGATTTGTTTTGTCCT+GGG | - | chr6.3:3907555-3907574 | None:intergenic | 40.0% |
| !!! | TGGAGATTTGTTTTGTCCTG+GGG | - | chr6.3:3907554-3907573 | None:intergenic | 40.0% |
| AACGTTGGACAAACAGCTGT+AGG | + | chr6.3:3905069-3905088 | MS.gene20637:CDS | 45.0% | |
| AAGGACACGTTTGGACATGT+TGG | + | chr6.3:3907385-3907404 | MS.gene20637:CDS | 45.0% | |
| AAGTCACCAATCTAGCATGG+CGG | - | chr6.3:3906912-3906931 | None:intergenic | 45.0% | |
| ACAGGACAAACTAGAGGCAA+GGG | - | chr6.3:3906265-3906284 | None:intergenic | 45.0% | |
| ACATGGCTGCTCTTGAAAGT+AGG | + | chr6.3:3908293-3908312 | MS.gene20637:intron | 45.0% | |
| ATGCAAACATCCGTACACCT+TGG | + | chr6.3:3905875-3905894 | MS.gene20637:CDS | 45.0% | |
| ATGCAGAACAGCACAACACA+AGG | + | chr6.3:3906079-3906098 | MS.gene20637:intron | 45.0% | |
| CACCGTTTACCTGTTCTCTT+GGG | + | chr6.3:3904994-3905013 | MS.gene20637:CDS | 45.0% | |
| CCATTTGGAGGACACTAATC+AGG | + | chr6.3:3905561-3905580 | MS.gene20637:CDS | 45.0% | |
| CCTGATTAGTGTCCTCCAAA+TGG | - | chr6.3:3905564-3905583 | None:intergenic | 45.0% | |
| CTGAAGTCACCAATCTAGCA+TGG | - | chr6.3:3906915-3906934 | None:intergenic | 45.0% | |
| CTGGGTCATGTATTATGGGA+CGG | + | chr6.3:3907846-3907865 | MS.gene20637:intron | 45.0% | |
| CTGTTTGTCCAACGTTGAAG+AGG | - | chr6.3:3905065-3905084 | None:intergenic | 45.0% | |
| GACAAACAGCTGTAGGAGTT+AGG | + | chr6.3:3905076-3905095 | MS.gene20637:CDS | 45.0% | |
| GAGGAGCTTGATACACTAGT+GGG | + | chr6.3:3908555-3908574 | MS.gene20637:CDS | 45.0% | |
| GATGTTCGTAATAGTTGGGC+TGG | + | chr6.3:3906694-3906713 | MS.gene20637:CDS | 45.0% | |
| GGAAGTCAAGGGTCTTTCAT+TGG | + | chr6.3:3905168-3905187 | MS.gene20637:CDS | 45.0% | |
| GGAATTCTAACTAGTGCTCC+AGG | - | chr6.3:3908795-3908814 | None:intergenic | 45.0% | |
| GGACACTAATCAGGTGCAAA+TGG | + | chr6.3:3905570-3905589 | MS.gene20637:intron | 45.0% | |
| GTATGCGTAATAGGGTCAAC+TGG | + | chr6.3:3907827-3907846 | MS.gene20637:intron | 45.0% | |
| GTCATGTATTATGGGACGGA+GGG | + | chr6.3:3907850-3907869 | MS.gene20637:intron | 45.0% | |
| TACAATAGGCCCAAGAGAAC+AGG | - | chr6.3:3905006-3905025 | None:intergenic | 45.0% | |
| TCAATGTGTTAGCAGCTGCT+TGG | + | chr6.3:3905509-3905528 | MS.gene20637:CDS | 45.0% | |
| TCACAAGTCATGTAGGCACT+CGG | + | chr6.3:3904663-3904682 | MS.gene20637:intron | 45.0% | |
| TCTGTGCCATCTATGTTCTG+TGG | - | chr6.3:3908256-3908275 | None:intergenic | 45.0% | |
| TCTTTACCGCCATGCTAGAT+TGG | + | chr6.3:3906903-3906922 | MS.gene20637:CDS | 45.0% | |
| TGAATTGTTTCCCATTGCCC+TGG | - | chr6.3:3905492-3905511 | None:intergenic | 45.0% | |
| TGACGCTATCTTAGGTGGAT+TGG | + | chr6.3:3907408-3907427 | MS.gene20637:CDS | 45.0% | |
| TGAGGAGCTTGATACACTAG+TGG | + | chr6.3:3908554-3908573 | MS.gene20637:CDS | 45.0% | |
| TTGGTGAAGATGGCGTCTAA+TGG | - | chr6.3:3905034-3905053 | None:intergenic | 45.0% | |
| ! | CACCCATTGCAAACCCTTTT+TGG | - | chr6.3:3909054-3909073 | None:intergenic | 45.0% |
| ! | GACCCTTTCAATGAAAGTGC+TGG | + | chr6.3:3905147-3905166 | MS.gene20637:CDS | 45.0% |
| ! | TGATACACTAGTGGGTCTCA+TGG | + | chr6.3:3908563-3908582 | MS.gene20637:CDS | 45.0% |
| ! | TGCTGTTTGTGATGCTCTCA+AGG | + | chr6.3:3906756-3906775 | MS.gene20637:CDS | 45.0% |
| !! | CATGTTGGTGACGCTATCTT+AGG | + | chr6.3:3907400-3907419 | MS.gene20637:CDS | 45.0% |
| !! | GCTATCTTAGGTGGATTGGT+GGG | + | chr6.3:3907412-3907431 | MS.gene20637:CDS | 45.0% |
| !!! | AGATTTGTTTTGTCCTGGGG+TGG | - | chr6.3:3907551-3907570 | None:intergenic | 45.0% |
| !!! | GGTGGAGATTTGTTTTGTCC+TGG | - | chr6.3:3907556-3907575 | None:intergenic | 45.0% |
| ACCTTGTCCTTCTGATCCAC+AGG | - | chr6.3:3905207-3905226 | None:intergenic | 50.0% | |
| ACTTCTGGTGCCCTAACACT+TGG | + | chr6.3:3908199-3908218 | MS.gene20637:CDS | 50.0% | |
| AGAGATATATCTGCCACCCC+AGG | + | chr6.3:3907535-3907554 | MS.gene20637:CDS | 50.0% | |
| ATGGGTCATCTATTGCGGGA+CGG | - | chr6.3:3907626-3907645 | None:intergenic | 50.0% | |
| CAAACATCCGTACACCTTGG+TGG | + | chr6.3:3905878-3905897 | MS.gene20637:CDS | 50.0% | |
| GACAGGACAAACTAGAGGCA+AGG | - | chr6.3:3906266-3906285 | None:intergenic | 50.0% | |
| GCACCGTTTACCTGTTCTCT+TGG | + | chr6.3:3904993-3905012 | MS.gene20637:CDS | 50.0% | |
| GGCCCAAGAGAACAGGTAAA+CGG | - | chr6.3:3904999-3905018 | None:intergenic | 50.0% | |
| GGTCATGTATTATGGGACGG+AGG | + | chr6.3:3907849-3907868 | MS.gene20637:intron | 50.0% | |
| GTGATTGATCGTCACCATCC+AGG | + | chr6.3:3909098-3909117 | MS.gene20637:CDS | 50.0% | |
| GTTGTTGAAGCCAGACCCTA+TGG | + | chr6.3:3905432-3905451 | MS.gene20637:intron | 50.0% | |
| TCAGGGACAGGACAAACTAG+AGG | - | chr6.3:3906271-3906290 | None:intergenic | 50.0% | |
| TCCTGTGGATCAGAAGGACA+AGG | + | chr6.3:3905203-3905222 | MS.gene20637:CDS | 50.0% | |
| TTGCAGGCATGCGTGGAAAT+TGG | + | chr6.3:3906998-3907017 | MS.gene20637:CDS | 50.0% | |
| ! | GTTTTGTGGCCACCACCATA+GGG | - | chr6.3:3905450-3905469 | None:intergenic | 50.0% |
| ! | TGCACTTTGAAGGAGGCTAG+AGG | + | chr6.3:3908986-3909005 | MS.gene20637:intron | 50.0% |
| !! | AGTTTTGTGGCCACCACCAT+AGG | - | chr6.3:3905451-3905470 | None:intergenic | 50.0% |
| !! | CATTGGCTTGCAACTTCACG+TGG | - | chr6.3:3905784-3905803 | None:intergenic | 50.0% |
| !! | CGCTATCTTAGGTGGATTGG+TGG | + | chr6.3:3907411-3907430 | MS.gene20637:CDS | 50.0% |
| !! | GGTGGTGGCCACAAAACTTT+TGG | + | chr6.3:3905453-3905472 | MS.gene20637:CDS | 50.0% |
| !! | GTTGGTGACGCTATCTTAGG+TGG | + | chr6.3:3907403-3907422 | MS.gene20637:CDS | 50.0% |
| ACTTTGCTTGCAGGCATGCG+TGG | + | chr6.3:3906991-3907010 | MS.gene20637:CDS | 55.0% | |
| GAAGGAGGCTAGAGGCTGAT+AGG | + | chr6.3:3908994-3909013 | MS.gene20637:intron | 55.0% | |
| GGCTGGTGTCTCAACTTTGC+AGG | + | chr6.3:3906711-3906730 | MS.gene20637:CDS | 55.0% | |
| GTCATCTATTGCGGGACGGA+GGG | - | chr6.3:3907622-3907641 | None:intergenic | 55.0% | |
| GTTGAAGCCAGACCCTATGG+TGG | + | chr6.3:3905435-3905454 | MS.gene20637:CDS | 55.0% | |
| GAAGCCAGACCCTATGGTGG+TGG | + | chr6.3:3905438-3905457 | MS.gene20637:CDS | 60.0% | |
| GGTCATCTATTGCGGGACGG+AGG | - | chr6.3:3907623-3907642 | None:intergenic | 60.0% | |
| GCGGGACGGAGGGAGAATGT+TGG | - | chr6.3:3907612-3907631 | None:intergenic | 65.0% | |
| GTGGCCACCACCATAGGGTC+TGG | - | chr6.3:3905445-3905464 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 3904137 | 3909223 | 3904137 | ID=MS.gene20637 |
| chr6.3 | mRNA | 3904137 | 3909223 | 3904137 | ID=MS.gene20637.t1;Parent=MS.gene20637 |
| chr6.3 | exon | 3904137 | 3904259 | 3904137 | ID=MS.gene20637.t1.exon1;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3904137 | 3904259 | 3904137 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3904961 | 3905224 | 3904961 | ID=MS.gene20637.t1.exon2;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3904961 | 3905224 | 3904961 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3905433 | 3905582 | 3905433 | ID=MS.gene20637.t1.exon3;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3905433 | 3905582 | 3905433 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3905766 | 3905899 | 3905766 | ID=MS.gene20637.t1.exon4;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3905766 | 3905899 | 3905766 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3906564 | 3906777 | 3906564 | ID=MS.gene20637.t1.exon5;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3906564 | 3906777 | 3906564 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3906874 | 3907019 | 3906874 | ID=MS.gene20637.t1.exon6;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3906874 | 3907019 | 3906874 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3907360 | 3907587 | 3907360 | ID=MS.gene20637.t1.exon7;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3907360 | 3907587 | 3907360 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3908108 | 3908310 | 3908108 | ID=MS.gene20637.t1.exon8;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3908108 | 3908310 | 3908108 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3908412 | 3908655 | 3908412 | ID=MS.gene20637.t1.exon9;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3908412 | 3908655 | 3908412 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| chr6.3 | exon | 3908998 | 3909223 | 3908998 | ID=MS.gene20637.t1.exon10;Parent=MS.gene20637.t1 |
| chr6.3 | CDS | 3908998 | 3909223 | 3908998 | ID=cds.MS.gene20637.t1;Parent=MS.gene20637.t1 |
| Gene Sequence |
| Protein sequence |
