AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042158

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042158.t1 MTR_4g132590 96.239 585 16 3 1 583 8 588 0.0 1142
MS.gene042158.t1 MTR_4g132590 98.566 488 7 0 96 583 2 489 0.0 999
MS.gene042158.t1 MTR_2g016470 59.081 479 185 6 112 583 137 611 0.0 583
MS.gene042158.t1 MTR_1g031590 37.527 461 246 11 133 588 125 548 1.61e-93 299
MS.gene042158.t1 MTR_4g084570 38.158 456 240 11 133 583 126 544 1.22e-92 297
MS.gene042158.t1 MTR_3g005340 37.581 463 239 12 139 584 118 547 3.41e-92 296
MS.gene042158.t1 MTR_3g086570 36.817 421 228 9 128 541 114 503 1.44e-91 294
MS.gene042158.t1 MTR_5g059260 37.916 451 234 9 146 581 140 559 9.19e-89 288
MS.gene042158.t1 MTR_5g032100 37.020 443 255 10 144 579 70 495 2.48e-87 281
MS.gene042158.t1 MTR_4g100810 36.913 447 224 12 122 561 69 464 2.58e-87 282
MS.gene042158.t1 MTR_3g100310 35.165 455 265 10 139 579 71 509 1.00e-86 280
MS.gene042158.t1 MTR_5g099010 38.131 396 198 7 162 557 122 470 2.54e-85 278
MS.gene042158.t1 MTR_3g115220 36.867 415 212 7 147 557 95 463 1.57e-82 271
MS.gene042158.t1 MTR_5g012770 36.971 449 208 13 123 561 86 469 2.11e-82 268
MS.gene042158.t1 MTR_4g082310 38.424 406 205 8 156 559 94 456 1.11e-81 266
MS.gene042158.t1 MTR_5g042200 37.931 406 207 8 156 559 82 444 3.98e-80 262
MS.gene042158.t1 MTR_5g064620 37.143 420 202 10 133 543 86 452 1.29e-76 254
MS.gene042158.t1 MTR_3g099480 36.667 420 201 10 133 543 115 478 1.49e-75 251
MS.gene042158.t1 MTR_3g086570 36.023 347 186 7 128 467 114 431 8.20e-74 244
MS.gene042158.t1 MTR_2g059350 36.700 406 207 10 159 559 115 475 3.79e-73 244
MS.gene042158.t1 MTR_4g110030 36.228 403 213 8 159 559 116 476 5.25e-73 244
MS.gene042158.t1 MTR_6g016015 35.452 409 208 9 159 559 115 475 1.19e-72 243
MS.gene042158.t1 MTR_3g096020 32.662 447 252 8 128 573 159 557 8.32e-64 221
MS.gene042158.t1 MTR_1g102030 32.409 469 251 13 131 581 60 480 5.98e-62 214
MS.gene042158.t1 MTR_4g125460 28.986 483 287 12 106 583 35 466 1.01e-60 210
MS.gene042158.t1 MTR_4g125460 28.986 483 287 12 106 583 174 605 1.87e-59 210
MS.gene042158.t1 MTR_5g081690 28.662 471 277 12 132 594 94 513 6.65e-58 204
MS.gene042158.t1 MTR_4g019210 32.828 396 218 9 159 552 232 581 1.01e-57 206
MS.gene042158.t1 MTR_3g026650 29.953 424 242 11 162 579 176 550 2.94e-48 178
MS.gene042158.t1 MTR_4g023030 30.586 461 261 15 129 579 199 610 1.53e-46 174
MS.gene042158.t1 MTR_3g026650 31.054 351 194 7 162 509 176 481 3.50e-42 159
MS.gene042158.t1 MTR_4g132680 45.417 240 40 10 253 487 1 154 4.23e-40 144
MS.gene042158.t1 MTR_1g095680 73.684 114 12 2 297 410 16 111 1.42e-38 138
MS.gene042158.t1 MTR_1g101990 32.803 314 161 8 275 581 6 276 9.42e-38 142
MS.gene042158.t1 MTR_4g010990 28.841 371 201 11 159 523 75 388 4.60e-37 144
MS.gene042158.t1 MTR_7g017330 29.275 345 195 8 146 478 83 390 4.82e-36 144
MS.gene042158.t1 MTR_4g010990 27.606 355 194 11 175 523 2 299 1.13e-30 124
MS.gene042158.t1 MTR_3g092590 29.972 357 206 10 131 478 61 382 6.90e-30 125
MS.gene042158.t1 MTR_3g092590 30.330 333 187 9 155 478 86 382 1.01e-29 125
MS.gene042158.t1 MTR_3g026650 30.224 268 139 7 162 426 176 398 4.64e-26 111
MS.gene042158.t1 MTR_1g007390 28.909 339 190 10 155 478 86 388 2.71e-24 108
MS.gene042158.t1 MTR_7g064210 34.518 197 95 4 278 471 24 189 2.18e-23 103
MS.gene042158.t1 MTR_1g101985 43.925 107 56 3 131 235 60 164 1.50e-21 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042158.t1 AT1G62330 66.549 565 164 6 44 583 82 646 0.0 748
MS.gene042158.t1 AT1G11990 62.480 613 193 7 6 588 7 612 0.0 739
MS.gene042158.t1 AT1G11990 60.000 620 175 7 6 588 7 590 0.0 703
MS.gene042158.t1 AT1G29200 51.184 549 249 7 42 583 70 606 0.0 537
MS.gene042158.t1 AT1G29200 56.159 479 199 4 112 583 16 490 0.0 531
MS.gene042158.t1 AT1G29200 56.159 479 199 4 112 583 16 490 0.0 531
MS.gene042158.t1 AT1G29200 59.048 420 168 2 164 583 1 416 1.08e-172 498
MS.gene042158.t1 AT5G65470 36.653 472 277 12 114 579 41 496 4.36e-93 296
MS.gene042158.t1 AT3G26370 37.089 426 229 9 134 552 128 521 1.15e-92 297
MS.gene042158.t1 AT2G01480 37.838 444 236 9 141 579 137 545 5.09e-91 293
MS.gene042158.t1 AT4G38390 37.931 435 219 8 128 558 90 477 1.63e-90 291
MS.gene042158.t1 AT1G35510 37.054 448 245 8 142 583 142 558 3.28e-88 286
MS.gene042158.t1 AT4G24530 36.501 463 260 13 128 579 71 510 4.94e-88 284
MS.gene042158.t1 AT1G14970 37.500 424 230 8 159 579 9 400 1.27e-87 279
MS.gene042158.t1 AT1G14970 36.795 443 236 10 144 579 21 426 1.81e-87 280
MS.gene042158.t1 AT2G01480 39.109 404 209 7 141 541 137 506 5.58e-87 281
MS.gene042158.t1 AT1G14970 36.795 443 236 10 144 579 141 546 3.95e-86 280
MS.gene042158.t1 AT4G16650 35.833 480 243 13 123 594 84 506 3.28e-83 272
MS.gene042158.t1 AT4G16650 35.833 480 243 13 123 594 84 506 3.28e-83 272
MS.gene042158.t1 AT2G03280 37.931 406 207 7 156 559 85 447 9.09e-82 266
MS.gene042158.t1 AT1G76270 31.977 516 272 11 50 561 21 461 4.53e-81 267
MS.gene042158.t1 AT1G14020 38.670 406 204 8 156 559 88 450 6.51e-81 265
MS.gene042158.t1 AT1G38065 35.431 429 237 8 159 579 26 422 6.87e-81 263
MS.gene042158.t1 AT1G38065 35.431 429 237 8 159 579 36 432 9.22e-81 263
MS.gene042158.t1 AT1G38131 35.431 429 237 8 159 579 155 551 1.09e-79 264
MS.gene042158.t1 AT1G20550 34.404 436 229 9 128 557 76 460 1.69e-79 263
MS.gene042158.t1 AT5G15740 36.905 420 216 11 159 575 106 479 1.05e-77 256
MS.gene042158.t1 AT3G02250 36.730 422 214 11 159 575 106 479 6.09e-76 252
MS.gene042158.t1 AT2G03280 35.566 433 207 8 156 559 85 474 1.05e-75 251
MS.gene042158.t1 AT5G64600 32.861 423 229 7 130 543 79 455 1.02e-67 230
MS.gene042158.t1 AT1G22460 34.383 413 214 10 133 540 135 495 6.28e-67 229
MS.gene042158.t1 AT1G04910 31.818 484 264 12 116 581 37 472 8.99e-66 225
MS.gene042158.t1 AT5G01100 28.988 514 301 12 48 558 119 571 1.66e-60 213
MS.gene042158.t1 AT2G37980 29.645 479 270 13 117 583 180 603 7.02e-59 209
MS.gene042158.t1 AT3G26370 36.667 270 138 4 134 397 128 370 2.37e-58 201
MS.gene042158.t1 AT3G54100 29.748 437 251 11 132 562 195 581 4.34e-58 207
MS.gene042158.t1 AT5G35570 30.480 479 275 14 133 607 225 649 4.01e-57 204
MS.gene042158.t1 AT2G44500 32.151 423 235 9 132 548 146 522 3.07e-54 195
MS.gene042158.t1 AT3G07900 29.978 457 264 12 132 579 157 566 6.76e-53 191
MS.gene042158.t1 AT5G63390 28.846 468 277 13 129 587 130 550 2.16e-46 172
MS.gene042158.t1 AT1G52630 28.788 396 218 12 132 521 46 383 1.57e-38 148
MS.gene042158.t1 AT3G30300 30.448 335 186 9 154 478 95 392 2.93e-36 145
MS.gene042158.t1 AT3G30300 30.448 335 186 9 154 478 95 392 2.93e-36 145
MS.gene042158.t1 AT3G03810 30.874 366 191 10 131 478 60 381 1.62e-34 139
MS.gene042158.t1 AT3G03810 30.874 366 191 10 131 478 60 381 1.62e-34 139
MS.gene042158.t1 AT1G52630 28.000 350 193 9 175 521 2 295 7.28e-32 127
MS.gene042158.t1 AT2G44500 30.897 301 159 7 132 426 146 403 3.41e-31 127

Find 160 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCAAGTTGTTCACTTTAT+TGG 0.051460 8.3:-1386502 MS.gene042158:CDS
ACACTACTGTACATAAATTT+TGG 0.080188 8.3:+1387555 None:intergenic
TTCTCTTTAGTGACTAATTT+AGG 0.115144 8.3:+1385637 None:intergenic
GCTCATTCCTTATGTGAATT+TGG 0.129244 8.3:-1386069 MS.gene042158:CDS
CCTTGGTCCCTGCTTCTTCT+TGG 0.143948 8.3:-1387995 MS.gene042158:CDS
ACCAGCAGTTTCTTGTATTC+TGG 0.171103 8.3:+1386254 None:intergenic
GTTGTTCACTTTATTGGATT+TGG 0.172106 8.3:-1386496 MS.gene042158:CDS
CTAGCAAGCCTGCGCTTATT+TGG 0.201176 8.3:+1385216 None:intergenic
CTCATTCCTTATGTGAATTT+GGG 0.207573 8.3:-1386068 MS.gene042158:CDS
CTCTCTTTCTATTTCCCTTC+AGG 0.222156 8.3:-1388870 MS.gene042158:intron
TCCATTTGGAGAATTAAATT+TGG 0.226569 8.3:-1386166 MS.gene042158:CDS
AGGAAGTAATGGATACATTT+TGG 0.228640 8.3:-1387793 MS.gene042158:CDS
CATGTTCTGATCAGCGAAAT+TGG 0.231747 8.3:-1387968 MS.gene042158:CDS
CGCGGGCATGCAGGTCTTAT+TGG 0.239648 8.3:-1386213 MS.gene042158:CDS
CGGCATCTTGTTGGTCCATT+TGG 0.257656 8.3:-1386180 MS.gene042158:CDS
GAGGAACGAAGTGATGATTT+AGG 0.262756 8.3:+1388890 None:intergenic
AGGAAGTCAGCTTTCATCTT+TGG 0.272921 8.3:-1385289 MS.gene042158:CDS
CTTCCTTCTCCTTCTCGTTA+TGG 0.276961 8.3:-1389030 MS.gene042158:CDS
TCTCTTTAGTGACTAATTTA+GGG 0.277243 8.3:+1385638 None:intergenic
TGGTTCGGAGTACGTGAATT+TGG 0.279306 8.3:+1389103 None:intergenic
ATCCTCATGCTTGCTGCTCT+TGG 0.290890 8.3:-1385745 MS.gene042158:CDS
GCATTTGCCATGACTGATTC+AGG 0.299740 8.3:-1385309 MS.gene042158:CDS
TCAATGCCAGTGCAGGAAAA+TGG 0.307253 8.3:+1386001 None:intergenic
TTGTTCACTTTATTGGATTT+GGG 0.312165 8.3:-1386495 MS.gene042158:CDS
GGTTCCTGCCACAAATCTTT+TGG 0.321484 8.3:+1388017 None:intergenic
CCAGCAGTTTCTTGTATTCT+GGG 0.323818 8.3:+1386255 None:intergenic
CATGAAAGCTTCAAAATACT+TGG 0.326457 8.3:-1386124 MS.gene042158:CDS
TCTGGTTATCGAATATATTA+TGG 0.330083 8.3:-1385264 MS.gene042158:CDS
TCCCTCACTATCCGAATATC+AGG 0.331934 8.3:+1386736 None:intergenic
ACTCCTTAGGGACAGGGACG+GGG 0.334299 8.3:+1383663 None:intergenic
CGCTTATTTGGACGTATTGT+TGG 0.334892 8.3:+1385228 None:intergenic
CAGCTTTCATCTTTGGTGTC+TGG 0.339290 8.3:-1385282 MS.gene042158:CDS
TAAGCCTAGGCCTACTCCTT+AGG 0.345393 8.3:+1383650 None:intergenic
CTCCTTAGGGACAGGGACGG+GGG 0.346526 8.3:+1383664 None:intergenic
ACCTGCAGCTCAAATGGTAT+TGG 0.362625 8.3:+1386454 None:intergenic
TACTCCTTAGGGACAGGGAC+GGG 0.368831 8.3:+1383662 None:intergenic
ACAACTTGACTCCTGATATT+CGG 0.369431 8.3:-1386747 MS.gene042158:CDS
TCCAAATTTAATTCTCCAAA+TGG 0.380795 8.3:+1386165 None:intergenic
CGAAGAAGAGAGGAAAGAAT+TGG 0.381135 8.3:-1386040 MS.gene042158:CDS
GTATTCTGGGAACAAATTGC+AGG 0.383617 8.3:+1386268 None:intergenic
GTAGCTGGTTCTAATTTGTA+TGG 0.388082 8.3:-1385697 MS.gene042158:CDS
CCAAAGTTGAATTGAGTAAC+CGG 0.388733 8.3:+1387583 None:intergenic
CTGCTGGTTTGCTTCTTAAG+AGG 0.406111 8.3:-1386239 MS.gene042158:CDS
AGAAGGAAGATGATCTGATT+CGG 0.406728 8.3:+1389044 None:intergenic
GCAGGCATGTCACCAACATC+AGG 0.412343 8.3:+1383692 None:intergenic
GGCATTGGCTGCCCATGCAT+TGG 0.418411 8.3:-1388176 MS.gene042158:CDS
ATTTGCTAATTATTCATCTC+AGG 0.422687 8.3:-1385587 MS.gene042158:intron
CACATACATTCTTTACACCT+TGG 0.424505 8.3:+1385075 None:intergenic
GAAGGAAGATGATCTGATTC+GGG 0.432766 8.3:+1389045 None:intergenic
TCCAATACCATTTGAGCTGC+AGG 0.433289 8.3:-1386455 MS.gene042158:intron
AGATGATCTGATTCGGGAGC+TGG 0.434581 8.3:+1389051 None:intergenic
CCATTGGATCGGCATCTTGT+TGG 0.435710 8.3:-1386189 MS.gene042158:CDS
TTGATTGATCCCACCATTTG+CGG 0.436523 8.3:+1387767 None:intergenic
ATATTTACCTGCAGCTCAAA+TGG 0.439821 8.3:+1386448 None:intergenic
TACCTTCTCCTTCAGAGCTC+AGG 0.441729 8.3:-1385804 MS.gene042158:CDS
CCGGTTACTCAATTCAACTT+TGG 0.444063 8.3:-1387583 MS.gene042158:CDS
TCCTTAGGGACAGGGACGGG+GGG 0.446828 8.3:+1383665 None:intergenic
CCTTCAGAGCTCAGGTCTGA+AGG 0.450269 8.3:-1385796 MS.gene042158:CDS
GTATAATTCCATAGTCAATT+CGG 0.459391 8.3:-1386799 MS.gene042158:intron
TGCAGGTCTTATTGGACCAT+TGG 0.462153 8.3:-1386205 MS.gene042158:CDS
TCAATTCGGAGACATCTATC+AGG 0.463228 8.3:-1386785 MS.gene042158:CDS
CTTCATAGGCTGTGCTGCCT+CGG 0.466333 8.3:-1385334 MS.gene042158:CDS
CAGCGAAATTGGGAACCTAA+TGG 0.469885 8.3:-1387957 MS.gene042158:intron
ATGTTCTGATCAGCGAAATT+GGG 0.470735 8.3:-1387967 MS.gene042158:CDS
TCTATTGTAGTTAGCAGCAC+TGG 0.472992 8.3:-1385358 MS.gene042158:intron
AGATTTGTGGCAGGAACCCT+TGG 0.473935 8.3:-1388012 MS.gene042158:CDS
AGCATGAGGATGGATTCTTC+AGG 0.476449 8.3:+1385757 None:intergenic
GTGAATTTGGTGAGCTGGAA+CGG 0.477372 8.3:+1389116 None:intergenic
AATTTATGTACAGTAGTGTA+TGG 0.478683 8.3:-1387551 MS.gene042158:CDS
AAGCCTAGGCCTACTCCTTA+GGG 0.480503 8.3:+1383651 None:intergenic
ACTGAGTATTCTTGAAGTAA+TGG 0.484424 8.3:+1383286 None:intergenic
ATGGATTCTTCAGGTGTCAA+TGG 0.485741 8.3:+1385766 None:intergenic
AAGAGGTTGCGCGGGCATGC+AGG 0.489665 8.3:-1386222 MS.gene042158:CDS
ACTACAGTCTTTGGACTTGG+AGG 0.490902 8.3:-1386701 MS.gene042158:CDS
CGAAGTGATGATTTAGGAGG+TGG 0.492133 8.3:+1388896 None:intergenic
TGAGATGAATAATTAGCAAA+TGG 0.493642 8.3:+1385589 None:intergenic
TGGTGGGATCAATCAACAAC+GGG 0.501801 8.3:-1387760 MS.gene042158:CDS
GTAATGCTGTTGTCGTGGCC+CGG 0.505025 8.3:-1387602 MS.gene042158:CDS
CGGGAGCTGGAGAGCCGGCT+CGG 0.505261 8.3:+1389064 None:intergenic
AAAACTACAGTCTTTGGACT+TGG 0.507383 8.3:-1386704 MS.gene042158:CDS
AGCCGGCTCGGACCGAGTCT+CGG 0.508114 8.3:+1389076 None:intergenic
TCTTTGGACTTGGAGGCAAT+CGG 0.510862 8.3:-1386694 MS.gene042158:CDS
AAGACAAACATATTTGTAGC+TGG 0.511487 8.3:-1385712 MS.gene042158:CDS
TTAGCAGCACTGGACTTCAT+AGG 0.513025 8.3:-1385348 MS.gene042158:CDS
CTATAAACACTTCTTGCCTT+AGG 0.515636 8.3:+1385102 None:intergenic
CCGAGTCTCGGAGAATGGTT+CGG 0.516767 8.3:+1389088 None:intergenic
CCTTCAGACCTGAGCTCTGA+AGG 0.519070 8.3:+1385796 None:intergenic
TCGGACCGAGTCTCGGAGAA+TGG 0.524446 8.3:+1389083 None:intergenic
GTATGGAGGTCGCTCACGGT+TGG 0.525649 8.3:-1385680 MS.gene042158:CDS
GCTTGCATTTCTCTAAAACC+TGG 0.525861 8.3:-1383734 MS.gene042158:CDS
AAGAGCAGCAAGCATGAGGA+TGG 0.526483 8.3:+1385747 None:intergenic
TATATACCTCTGCCAATGCA+TGG 0.527491 8.3:+1388164 None:intergenic
ACTACAATAGAAGGAAGTAA+TGG 0.530681 8.3:-1387804 MS.gene042158:intron
CATGGTGTCCAAGAAGAAGC+AGG 0.531478 8.3:+1387987 None:intergenic
TAGGCCTACTCCTTAGGGAC+AGG 0.531483 8.3:+1383656 None:intergenic
CTACAAATATGTTTGTCTTG+CGG 0.533769 8.3:+1385716 None:intergenic
AGTACGTGAATTTGGTGAGC+TGG 0.540415 8.3:+1389111 None:intergenic
CTCCGAGACTCGGTCCGAGC+CGG 0.542444 8.3:-1389078 MS.gene042158:CDS
GTCTTATTGGACCATTGGAT+CGG 0.546272 8.3:-1386200 MS.gene042158:CDS
AACGTGAACCAAAAGATTTG+TGG 0.547039 8.3:-1388025 MS.gene042158:CDS
CCTTCTCGTTATGGTATCGA+AGG 0.548368 8.3:-1389021 MS.gene042158:CDS
CCAGGTAACAGATGTTGACA+TGG 0.548508 8.3:-1386581 MS.gene042158:intron
TATTGGATTTGGGAATCGCT+TGG 0.548541 8.3:-1386485 MS.gene042158:CDS
TGCTTCTTAAGAGGTTGCGC+GGG 0.551538 8.3:-1386230 MS.gene042158:CDS
GGGAAATTATGCAAGGATGT+TGG 0.555862 8.3:-1388197 MS.gene042158:CDS
TATCGAATATATTATGGTGG+AGG 0.560012 8.3:-1385258 MS.gene042158:CDS
CCCAGAATACAAGAAACTGC+TGG 0.564118 8.3:-1386255 MS.gene042158:CDS
GGCTGCCCATGCATTGGCAG+AGG 0.565876 8.3:-1388170 MS.gene042158:intron
CTTCAGAGCTCAGGTCTGAA+GGG 0.566401 8.3:-1385795 MS.gene042158:CDS
CAATTTCGCTGATCAGAACA+TGG 0.567181 8.3:+1387969 None:intergenic
ATGTGTTTCAAGTAAAAGCT+CGG 0.568622 8.3:+1386544 None:intergenic
TCATTCCTTATGTGAATTTG+GGG 0.569061 8.3:-1386067 MS.gene042158:CDS
CTCCTGATATTCGGATAGTG+AGG 0.572428 8.3:-1386738 MS.gene042158:CDS
ATTTGTATGGAGGTCGCTCA+CGG 0.580220 8.3:-1385684 MS.gene042158:CDS
TTATGCAAGGATGTTGGCAT+TGG 0.580228 8.3:-1388191 MS.gene042158:CDS
CACGAGAATATCCCTGATGT+TGG 0.580610 8.3:-1383704 MS.gene042158:CDS
TTGCTTCTTAAGAGGTTGCG+CGG 0.584549 8.3:-1386231 MS.gene042158:CDS
AGAGAACTTACTTTCTTCAG+CGG 0.584628 8.3:-1385620 MS.gene042158:CDS
ATATACCTCTGCCAATGCAT+GGG 0.584882 8.3:+1388165 None:intergenic
GACTAATTTAGGGTACAAGC+TGG 0.588710 8.3:+1385648 None:intergenic
CCGAACCATTCTCCGAGACT+CGG 0.588983 8.3:-1389088 MS.gene042158:CDS
TATGAGAATTGAAACCTGAA+GGG 0.590645 8.3:+1388856 None:intergenic
CTACTCCTTAGGGACAGGGA+CGG 0.590918 8.3:+1383661 None:intergenic
GCTGGTTCTAATTTGTATGG+AGG 0.591032 8.3:-1385694 MS.gene042158:CDS
TGATTCGGGAGCTGGAGAGC+CGG 0.592818 8.3:+1389059 None:intergenic
CTGAAGGGAAATAGAAAGAG+AGG 0.593454 8.3:+1388871 None:intergenic
TATTCTGGGAACAAATTGCA+GGG 0.594650 8.3:+1386269 None:intergenic
CCAACAAGATGCCGATCCAA+TGG 0.595281 8.3:+1386189 None:intergenic
TTTCAAGTAAAAGCTCGGCT+TGG 0.597881 8.3:+1386549 None:intergenic
CGCAGAAGGGAAATTATGCA+AGG 0.598798 8.3:-1388204 MS.gene042158:CDS
ATACCATAACGAGAAGGAGA+AGG 0.599116 8.3:+1389027 None:intergenic
AGCCAAGAGCAGCAAGCATG+AGG 0.599771 8.3:+1385743 None:intergenic
CAAGAAGAAGCAGGGACCAA+GGG 0.600590 8.3:+1387996 None:intergenic
AGATGTTGACATGGGAAAGG+AGG 0.602228 8.3:-1386572 MS.gene042158:CDS
CTGACTTCCTGAATCAGTCA+TGG 0.602436 8.3:+1385302 None:intergenic
ACATGTACAGACAAGGCCTA+AGG 0.603476 8.3:-1385118 MS.gene042158:CDS
CCAAGAAGAAGCAGGGACCA+AGG 0.605073 8.3:+1387995 None:intergenic
CAATACGTCCAAATAAGCGC+AGG 0.605551 8.3:-1385224 MS.gene042158:CDS
GTTCAGGTATGGACGTAGAT+CGG 0.606473 8.3:-1389141 None:intergenic
AACAGATGTTGACATGGGAA+AGG 0.607086 8.3:-1386575 MS.gene042158:CDS
TGAACCAAAAGATTTGTGGC+AGG 0.613832 8.3:-1388021 MS.gene042158:CDS
CAAAGTTGAATTGAGTAACC+GGG 0.614622 8.3:+1387584 None:intergenic
GAACGAAGTGATGATTTAGG+AGG 0.616658 8.3:+1388893 None:intergenic
CCTTCGATACCATAACGAGA+AGG 0.620271 8.3:+1389021 None:intergenic
TCCTGATATTCGGATAGTGA+GGG 0.625925 8.3:-1386737 MS.gene042158:CDS
CAGGCATGTCACCAACATCA+GGG 0.634487 8.3:+1383693 None:intergenic
GGTTATCGAATATATTATGG+TGG 0.638956 8.3:-1385261 MS.gene042158:CDS
CATTCCTTATGTGAATTTGG+GGG 0.642456 8.3:-1386066 MS.gene042158:CDS
AGTCATGGCAAATGCATCCG+AGG 0.654270 8.3:+1385317 None:intergenic
ATGGTGTCCAAGAAGAAGCA+GGG 0.657952 8.3:+1387988 None:intergenic
GGTTTGTAATGCTGTTGTCG+TGG 0.662245 8.3:-1387607 MS.gene042158:CDS
ATGGTGGGATCAATCAACAA+CGG 0.673611 8.3:-1387761 MS.gene042158:CDS
TCTCAGATTTGAAATTGACA+TGG 0.677789 8.3:-1386094 MS.gene042158:CDS
CAGGTAACAGATGTTGACAT+GGG 0.679242 8.3:-1386580 MS.gene042158:CDS
ATTCGGAGACATCTATCAGG+AGG 0.682186 8.3:-1386782 MS.gene042158:CDS
GACCTGAGCTCTGAAGGAGA+AGG 0.682474 8.3:+1385802 None:intergenic
GAAGTGTTTATAGATATCCA+AGG 0.690681 8.3:-1385092 MS.gene042158:CDS
AAACTAAACATGTACAGACA+AGG 0.694433 8.3:-1385125 MS.gene042158:CDS
GTAGTGTATGGAGAGATACA+AGG 0.697044 8.3:-1387539 MS.gene042158:intron
AGGCCTACTCCTTAGGGACA+GGG 0.698651 8.3:+1383657 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATAAGTTAAATTGA+CGG + chr8.3:1385576-1385595 None:intergenic 10.0%
!! AACAAATATAAATAAAGTAA+GGG - chr8.3:1388078-1388097 MS.gene042158:intron 10.0%
!! TAACAAATATAAATAAAGTA+AGG - chr8.3:1388077-1388096 MS.gene042158:intron 10.0%
!!! ACAATTTAATTTATTTACAT+AGG - chr8.3:1387354-1387373 MS.gene042158:intron 10.0%
!!! ATTTTGAAACAAATTTTTTT+TGG + chr8.3:1385321-1385340 None:intergenic 10.0%
!!! TAAAGAATAATTGTTTATTT+TGG - chr8.3:1388207-1388226 MS.gene042158:CDS 10.0%
!!! TATTTCTAAATCATATATTA+TGG - chr8.3:1387815-1387834 MS.gene042158:intron 10.0%
!! AAAACAAAAACAAAAACAAT+TGG - chr8.3:1387653-1387672 MS.gene042158:intron 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8.3:1385449-1385468 None:intergenic 15.0%
!! AATAATTTCTATAGATAGAT+AGG + chr8.3:1383608-1383627 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8.3:1385448-1385467 MS.gene042158:intron 15.0%
!! CATAGTTATTATTACTTTAT+GGG + chr8.3:1388271-1388290 None:intergenic 15.0%
!! TCTAACAATTAAATACAAAT+AGG + chr8.3:1385793-1385812 None:intergenic 15.0%
!! TTAAAAATACTTACTACTTA+TGG + chr8.3:1388141-1388160 None:intergenic 15.0%
!!! ACTTGATTTTTAAGTATAAT+AGG + chr8.3:1385888-1385907 None:intergenic 15.0%
!!! ATAAGATTTATCAACAATTT+TGG - chr8.3:1385099-1385118 MS.gene042158:CDS 15.0%
!!! TAAGATTTATCAACAATTTT+GGG - chr8.3:1385100-1385119 MS.gene042158:CDS 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8.3:1385425-1385444 None:intergenic 15.0%
!!! TTCTGATATTTATTTTTTCA+GGG - chr8.3:1384143-1384162 MS.gene042158:intron 15.0%
!!! TTTCTGATATTTATTTTTTC+AGG - chr8.3:1384142-1384161 MS.gene042158:intron 15.0%
!! AAAACAACATAAGAAGATAT+TGG - chr8.3:1388894-1388913 MS.gene042158:CDS 20.0%
!! AAACCTAATATTTAGTTACT+GGG - chr8.3:1384969-1384988 MS.gene042158:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8.3:1385439-1385458 MS.gene042158:intron 20.0%
!! AAATAAAATCAAGCAAAAAG+AGG + chr8.3:1387800-1387819 None:intergenic 20.0%
!! AAATTTAATTCAACCAATTC+TGG + chr8.3:1385060-1385079 None:intergenic 20.0%
!! AATGATTAAGAGAAAGATAA+TGG + chr8.3:1385482-1385501 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8.3:1385362-1385381 None:intergenic 20.0%
!! CCATAAAGTAATAATAACTA+TGG - chr8.3:1388269-1388288 MS.gene042158:intron 20.0%
!! CCATAGTTATTATTACTTTA+TGG + chr8.3:1388272-1388291 None:intergenic 20.0%
!! TGTGAATGAAAAATTATCAA+AGG + chr8.3:1388629-1388648 None:intergenic 20.0%
!! TTAAATGCTTATAGTGTAAT+CGG + chr8.3:1384064-1384083 None:intergenic 20.0%
!!! AAATGTTTAGTTTTGAAATG+AGG - chr8.3:1388871-1388890 MS.gene042158:CDS 20.0%
!!! AAGATTTATCAACAATTTTG+GGG - chr8.3:1385101-1385120 MS.gene042158:CDS 20.0%
!!! CATCAAATAAAAAGTACATA+GGG + chr8.3:1384949-1384968 None:intergenic 20.0%
!!! CTACTTTGATTTAAAGTAAT+TGG - chr8.3:1386559-1386578 MS.gene042158:CDS 20.0%
!!! GTTTAATAGTTTAACTTGTT+TGG - chr8.3:1383730-1383749 MS.gene042158:CDS 20.0%
!!! TAAGCTTTATCTTAAATGAT+TGG - chr8.3:1384742-1384761 MS.gene042158:intron 20.0%
!!! TATAAGCTATTTCTATAACA+AGG + chr8.3:1384021-1384040 None:intergenic 20.0%
!!! TCATCAAATAAAAAGTACAT+AGG + chr8.3:1384950-1384969 None:intergenic 20.0%
!!! TTTCAACAATTATTTTGAGA+GGG + chr8.3:1389010-1389029 None:intergenic 20.0%
!!! TTTTCAACAATTATTTTGAG+AGG + chr8.3:1389011-1389030 None:intergenic 20.0%
! AACAATGCTACAAATTACAA+TGG + chr8.3:1387395-1387414 None:intergenic 25.0%
! AACTTATTCGTGTATTTGTT+GGG - chr8.3:1385176-1385195 MS.gene042158:CDS 25.0%
! AATTTATGTACAGTAGTGTA+TGG - chr8.3:1384851-1384870 MS.gene042158:intron 25.0%
! AGCTGTAAGTAATTCAAAAT+GGG + chr8.3:1389039-1389058 None:intergenic 25.0%
! AGTATTCTTTGATCAAGTAA+AGG - chr8.3:1389136-1389155 MS.gene042158:CDS 25.0%
! AGTTTAATATAGTTCAAGCA+AGG + chr8.3:1383899-1383918 None:intergenic 25.0%
! ATCAAATATTTCGATTTCCA+AGG + chr8.3:1388182-1388201 None:intergenic 25.0%
! ATGTCGTAATAAACAATCTA+AGG + chr8.3:1383636-1383655 None:intergenic 25.0%
! CATATATTATGGTAAAGTAG+TGG - chr8.3:1387826-1387845 MS.gene042158:intron 25.0%
! GAAAATTGAAAACTTTGCTA+TGG + chr8.3:1384317-1384336 None:intergenic 25.0%
! GAAACCTAATATTTAGTTAC+TGG - chr8.3:1384968-1384987 MS.gene042158:intron 25.0%
! GTATAATTCCATAGTCAATT+CGG - chr8.3:1385603-1385622 MS.gene042158:CDS 25.0%
! TAACTTATTCGTGTATTTGT+TGG - chr8.3:1385175-1385194 MS.gene042158:CDS 25.0%
! TAGCTGTAAGTAATTCAAAA+TGG + chr8.3:1389040-1389059 None:intergenic 25.0%
! TAGCTGTAAGTATTCTTTAT+CGG - chr8.3:1384665-1384684 MS.gene042158:intron 25.0%
! TCCAAATTTAATTCTCCAAA+TGG + chr8.3:1386240-1386259 None:intergenic 25.0%
! TCCATTTGGAGAATTAAATT+TGG - chr8.3:1386236-1386255 MS.gene042158:CDS 25.0%
! TCTCTTTAGTGACTAATTTA+GGG + chr8.3:1386767-1386786 None:intergenic 25.0%
! TCTGGTTATCGAATATATTA+TGG - chr8.3:1387138-1387157 MS.gene042158:intron 25.0%
! TGAAAAACACTACAATAGAA+TGG - chr8.3:1387217-1387236 MS.gene042158:intron 25.0%
! TGACAGTAAGTAACAATTTA+CGG + chr8.3:1383786-1383805 None:intergenic 25.0%
! TGAGATGAATAATTAGCAAA+TGG + chr8.3:1386816-1386835 None:intergenic 25.0%
! TTCTCTTTAGTGACTAATTT+AGG + chr8.3:1386768-1386787 None:intergenic 25.0%
! TTGTTCACTTTATTGGATTT+GGG - chr8.3:1385907-1385926 MS.gene042158:intron 25.0%
! TTTATAGTTGCTTCTACTAT+TGG - chr8.3:1388951-1388970 MS.gene042158:CDS 25.0%
!! AATCAAGTTGTTCACTTTAT+TGG - chr8.3:1385900-1385919 MS.gene042158:intron 25.0%
!! ACACTACTGTACATAAATTT+TGG + chr8.3:1384850-1384869 None:intergenic 25.0%
!! AGATTTATCAACAATTTTGG+GGG - chr8.3:1385102-1385121 MS.gene042158:CDS 25.0%
!! AGTTTAATTAGCTTACTACA+AGG + chr8.3:1385757-1385776 None:intergenic 25.0%
!! ATTTGCTAATTATTCATCTC+AGG - chr8.3:1386815-1386834 MS.gene042158:intron 25.0%
!! CAATTAGGAAAAGCATAATA+GGG + chr8.3:1386071-1386090 None:intergenic 25.0%
!! CACTACTGTACATAAATTTT+GGG + chr8.3:1384849-1384868 None:intergenic 25.0%
!! GTTTAATTAGCTTACTACAA+GGG + chr8.3:1385756-1385775 None:intergenic 25.0%
!! TATTATGCTTTTCCTAATTG+AGG - chr8.3:1386071-1386090 MS.gene042158:CDS 25.0%
!! TCAATTAGGAAAAGCATAAT+AGG + chr8.3:1386072-1386091 None:intergenic 25.0%
!!! CAGTTGGTAAAAAAAACAAT+AGG + chr8.3:1388031-1388050 None:intergenic 25.0%
!!! GATTTTTAAGTATAATAGGC+AGG + chr8.3:1385884-1385903 None:intergenic 25.0%
!!! TGTTTTTGTTTTAGTTGTGT+GGG + chr8.3:1387645-1387664 None:intergenic 25.0%
!!! TTCAACAATTATTTTGAGAG+GGG + chr8.3:1389009-1389028 None:intergenic 25.0%
!!! TTGTTTTTGTTTTAGTTGTG+TGG + chr8.3:1387646-1387665 None:intergenic 25.0%
AAAAAACACAAGGCATGAAA+AGG - chr8.3:1388826-1388845 MS.gene042158:intron 30.0%
AAACAGGATTTACTGTAACA+AGG + chr8.3:1386902-1386921 None:intergenic 30.0%
AAACTAAACATGTACAGACA+AGG - chr8.3:1387277-1387296 MS.gene042158:intron 30.0%
AAGACAAACATATTTGTAGC+TGG - chr8.3:1386690-1386709 MS.gene042158:CDS 30.0%
AATTGTTAGAAGACTTTACC+AGG - chr8.3:1385803-1385822 MS.gene042158:CDS 30.0%
ACAACACTTCTGAATCATTT+GGG - chr8.3:1384688-1384707 MS.gene042158:intron 30.0%
ACAACATAAGAAGATATTGG+TGG - chr8.3:1388897-1388916 MS.gene042158:CDS 30.0%
ACATTACTGTTAACAGACTA+AGG - chr8.3:1387494-1387513 MS.gene042158:intron 30.0%
ACTAAGAAAAAAACGCAGAA+GGG - chr8.3:1384185-1384204 MS.gene042158:intron 30.0%
ACTACAATAGAAGGAAGTAA+TGG - chr8.3:1384598-1384617 MS.gene042158:intron 30.0%
ACTATATCAAGCAAGTACAT+AGG - chr8.3:1383937-1383956 MS.gene042158:intron 30.0%
ACTGAGTATTCTTGAAGTAA+TGG + chr8.3:1389119-1389138 None:intergenic 30.0%
ATATGAGAATTGAAACCTGA+AGG + chr8.3:1383550-1383569 None:intergenic 30.0%
CACCAAAGTAAAAAAACACA+AGG - chr8.3:1388816-1388835 MS.gene042158:intron 30.0%
CATGAAAGCTTCAAAATACT+TGG - chr8.3:1386278-1386297 MS.gene042158:CDS 30.0%
CTACAAATATGTTTGTCTTG+CGG + chr8.3:1386689-1386708 None:intergenic 30.0%
CTAGCAACAAACATTATACT+CGG - chr8.3:1388526-1388545 MS.gene042158:intron 30.0%
CTCATTCCTTATGTGAATTT+GGG - chr8.3:1386334-1386353 MS.gene042158:intron 30.0%
CTGTAAGTAATTCAAAATGG+GGG + chr8.3:1389037-1389056 None:intergenic 30.0%
CTTACTGTCATAAGTTCTTA+TGG - chr8.3:1383796-1383815 MS.gene042158:intron 30.0%
GAAATTTGATCAACCAGAAT+TGG - chr8.3:1385044-1385063 MS.gene042158:intron 30.0%
GCTGTAAGTAATTCAAAATG+GGG + chr8.3:1389038-1389057 None:intergenic 30.0%
GGCTAAATTGATTAATCCAT+AGG - chr8.3:1387448-1387467 MS.gene042158:intron 30.0%
GGCTTATATAACTACAAACT+AGG + chr8.3:1384280-1384299 None:intergenic 30.0%
GGTTATCGAATATATTATGG+TGG - chr8.3:1387141-1387160 MS.gene042158:intron 30.0%
GTTCAAAAGGAAACAGATAT+AGG + chr8.3:1384110-1384129 None:intergenic 30.0%
GTTGTTCACTTTATTGGATT+TGG - chr8.3:1385906-1385925 MS.gene042158:intron 30.0%
TAAAACAAGAATGCTAGAAG+TGG + chr8.3:1385157-1385176 None:intergenic 30.0%
TAAAATCAAGCAAAAAGAGG+TGG + chr8.3:1387797-1387816 None:intergenic 30.0%
TAATGACAATGAGAGAGAAA+TGG + chr8.3:1384900-1384919 None:intergenic 30.0%
TACTAAGAAAAAAACGCAGA+AGG - chr8.3:1384184-1384203 MS.gene042158:intron 30.0%
TATCCAAGTTAAGTTCATTG+TGG + chr8.3:1388484-1388503 None:intergenic 30.0%
TATCGAATATATTATGGTGG+AGG - chr8.3:1387144-1387163 MS.gene042158:intron 30.0%
TATGAGAATTGAAACCTGAA+GGG + chr8.3:1383549-1383568 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr8.3:1383831-1383850 MS.gene042158:intron 30.0%
TCACCCAGTAACTAAATATT+AGG + chr8.3:1384975-1384994 None:intergenic 30.0%
TCATTCCTTATGTGAATTTG+GGG - chr8.3:1386335-1386354 MS.gene042158:intron 30.0%
TCCATAGCTGCAAAAAAAAA+AGG - chr8.3:1384523-1384542 MS.gene042158:intron 30.0%
TCCTAAAAAACTACAGTCTT+TGG - chr8.3:1385692-1385711 MS.gene042158:CDS 30.0%
TGTAAGTAATTCAAAATGGG+GGG + chr8.3:1389036-1389055 None:intergenic 30.0%
TTAAATGATTGGCGTCATTT+GGG - chr8.3:1384753-1384772 MS.gene042158:intron 30.0%
TTCTACTCTACTACAATAGA+AGG - chr8.3:1384589-1384608 MS.gene042158:intron 30.0%
TTGTGATGTCTAATTATCGA+AGG + chr8.3:1385980-1385999 None:intergenic 30.0%
! AACTAGTTCTTCACTTATAC+TGG - chr8.3:1386466-1386485 MS.gene042158:CDS 30.0%
! AATTTTCAGTAACTCTGACT+TGG - chr8.3:1384330-1384349 MS.gene042158:intron 30.0%
! ACTTATTCGTGTATTTGTTG+GGG - chr8.3:1385177-1385196 MS.gene042158:CDS 30.0%
! ATGTGTTTCAAGTAAAAGCT+CGG + chr8.3:1385861-1385880 None:intergenic 30.0%
! ATTTTCAGTAACTCTGACTT+GGG - chr8.3:1384331-1384350 MS.gene042158:intron 30.0%
! CTTCTAACTAGCTTAAACTA+TGG + chr8.3:1383858-1383877 None:intergenic 30.0%
! GAAGTGTTTATAGATATCCA+AGG - chr8.3:1387310-1387329 MS.gene042158:intron 30.0%
! TAGTCTTTTGATGAATGACA+CGG - chr8.3:1387014-1387033 MS.gene042158:intron 30.0%
! TCTCAGATTTGAAATTGACA+TGG - chr8.3:1386308-1386327 MS.gene042158:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8.3:1385531-1385550 MS.gene042158:intron 30.0%
!! GCACATTTTAGAAATCAAAG+AGG + chr8.3:1387703-1387722 None:intergenic 30.0%
!!! AGGAAGTAATGGATACATTT+TGG - chr8.3:1384609-1384628 MS.gene042158:intron 30.0%
!!! CAAGTATTTTGAAGCTTTCA+TGG + chr8.3:1386280-1386299 None:intergenic 30.0%
!!! TCCAAAGACTGTAGTTTTTT+AGG + chr8.3:1385696-1385715 None:intergenic 30.0%
!!! TGCCTTGTGTTTTTTTACTT+TGG + chr8.3:1388821-1388840 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8.3:1385530-1385549 None:intergenic 30.0%
!!! TTGTTGCTAGCTTACTTTTT+AGG + chr8.3:1388516-1388535 None:intergenic 30.0%
!!! TTTTTGGTTTTTAACCTGCA+AGG + chr8.3:1388422-1388441 None:intergenic 30.0%
AAAACTACAGTCTTTGGACT+TGG - chr8.3:1385698-1385717 MS.gene042158:CDS 35.0%
AACGCCAAACGTTTAATATG+AGG + chr8.3:1386963-1386982 None:intergenic 35.0%
AACGTGAACCAAAAGATTTG+TGG - chr8.3:1384377-1384396 MS.gene042158:intron 35.0%
AATGCATGTAATCATTGCCT+TGG - chr8.3:1388162-1388181 MS.gene042158:intron 35.0%
ACAACTTGACTCCTGATATT+CGG - chr8.3:1385655-1385674 MS.gene042158:CDS 35.0%
AGAAGGAAGATGATCTGATT+CGG + chr8.3:1383361-1383380 None:intergenic 35.0%
AGAGAACTTACTTTCTTCAG+CGG - chr8.3:1386782-1386801 MS.gene042158:CDS 35.0%
ATATTTACCTGCAGCTCAAA+TGG + chr8.3:1385957-1385976 None:intergenic 35.0%
ATGTTCTGATCAGCGAAATT+GGG - chr8.3:1384435-1384454 MS.gene042158:intron 35.0%
CAAAGTTGAATTGAGTAACC+GGG + chr8.3:1384821-1384840 None:intergenic 35.0%
CACATACATTCTTTACACCT+TGG + chr8.3:1387330-1387349 None:intergenic 35.0%
CATTCCTTATGTGAATTTGG+GGG - chr8.3:1386336-1386355 MS.gene042158:intron 35.0%
CCAAAGTTGAATTGAGTAAC+CGG + chr8.3:1384822-1384841 None:intergenic 35.0%
CTATAAACACTTCTTGCCTT+AGG + chr8.3:1387303-1387322 None:intergenic 35.0%
CTGTAACAAGGAGCTTAATT+AGG + chr8.3:1386890-1386909 None:intergenic 35.0%
CTTAAATGATTGGCGTCATT+TGG - chr8.3:1384752-1384771 MS.gene042158:intron 35.0%
GACAACACTTCTGAATCATT+TGG - chr8.3:1384687-1384706 MS.gene042158:intron 35.0%
GACACTTGTGAGATTTCTTA+TGG - chr8.3:1383657-1383676 MS.gene042158:intron 35.0%
GCTCATTCCTTATGTGAATT+TGG - chr8.3:1386333-1386352 MS.gene042158:intron 35.0%
GGAGCATATTAAAATTGGCA+TGG + chr8.3:1388988-1389007 None:intergenic 35.0%
GTAGAAGCAACTATAAAACC+TGG + chr8.3:1388948-1388967 None:intergenic 35.0%
GTGGAGAAATTGATTACTAG+CGG - chr8.3:1385002-1385021 MS.gene042158:intron 35.0%
GTTAGTACTCTTACTCAGTA+TGG + chr8.3:1384558-1384577 None:intergenic 35.0%
GTTTGAAGAGTTGAGATCAA+CGG + chr8.3:1388347-1388366 None:intergenic 35.0%
TAGACTGATACTTGTTCAGT+TGG + chr8.3:1388047-1388066 None:intergenic 35.0%
TCAATTTAGCCAGAAGAAGA+CGG + chr8.3:1387439-1387458 None:intergenic 35.0%
TCTAGATGAAGTCCTCAATT+AGG + chr8.3:1386086-1386105 None:intergenic 35.0%
TGCTCCTCATATTAAACGTT+TGG - chr8.3:1386956-1386975 MS.gene042158:intron 35.0%
TTAAACGTTTGGCGTTATTG+AGG - chr8.3:1386967-1386986 MS.gene042158:intron 35.0%
TTCATTCACAATCAACAGTG+TGG - chr8.3:1388639-1388658 MS.gene042158:intron 35.0%
! AATTAGCTTACTACAAGGGA+AGG + chr8.3:1385752-1385771 None:intergenic 35.0%
! ACACAACAGACTTGTTCAAA+AGG + chr8.3:1384123-1384142 None:intergenic 35.0%
! ACATGAAAAGTGCACAAAAC+AGG + chr8.3:1386918-1386937 None:intergenic 35.0%
! ACTTTGCTATGGCAAACAAT+TGG + chr8.3:1384306-1384325 None:intergenic 35.0%
! AGAGGGGAGCATATTAAAAT+TGG + chr8.3:1388993-1389012 None:intergenic 35.0%
! ATATTCTCGTGTGTTTTTCC+AGG + chr8.3:1388689-1388708 None:intergenic 35.0%
! ATTAGCTTACTACAAGGGAA+GGG + chr8.3:1385751-1385770 None:intergenic 35.0%
! CATAAGAAGATATTGGTGGT+TGG - chr8.3:1388901-1388920 MS.gene042158:CDS 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr8.3:1385400-1385419 None:intergenic 35.0%
! TATTCTGGGAACAAATTGCA+GGG + chr8.3:1386136-1386155 None:intergenic 35.0%
! TATTGAGGACCGGATTATTT+TGG - chr8.3:1386982-1387001 MS.gene042158:intron 35.0%
! TGACTTGGGTATTTCACATT+TGG - chr8.3:1384345-1384364 MS.gene042158:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8.3:1385396-1385415 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8.3:1385295-1385314 None:intergenic 35.0%
!! GTAGCTGGTTCTAATTTGTA+TGG - chr8.3:1386705-1386724 MS.gene042158:CDS 35.0%
!! GTGTTTTTGAACAGAGAATG+AGG - chr8.3:1387241-1387260 MS.gene042158:intron 35.0%
!! TAATAACAGTAGAGCATTGC+CGG + chr8.3:1386031-1386050 None:intergenic 35.0%
!! TATCAACAATTTTGGGGGAT+GGG - chr8.3:1385107-1385126 MS.gene042158:CDS 35.0%
!! TTATCAACAATTTTGGGGGA+TGG - chr8.3:1385106-1385125 MS.gene042158:CDS 35.0%
!!! GCCTTTTTTTTTTGCAGCTA+TGG + chr8.3:1384527-1384546 None:intergenic 35.0%
!!! TACATTTTGGTTACCGCAAA+TGG - chr8.3:1384622-1384641 MS.gene042158:intron 35.0%
AAAGCCATGAACTACAGATG+TGG + chr8.3:1385259-1385278 None:intergenic 40.0%
AAATTGGCATGGAAACTGCA+AGG + chr8.3:1388977-1388996 None:intergenic 40.0%
AACAGATGTTGACATGGGAA+AGG - chr8.3:1385827-1385846 MS.gene042158:intron 40.0%
AAGGATATGCAGATAGTGAC+TGG + chr8.3:1388403-1388422 None:intergenic 40.0%
AATGACCAAAGCTCTTTCGA+AGG + chr8.3:1388374-1388393 None:intergenic 40.0%
ACAGCAGCACCAAAATAATC+CGG + chr8.3:1386994-1387013 None:intergenic 40.0%
ACCAGCAGTTTCTTGTATTC+TGG + chr8.3:1386151-1386170 None:intergenic 40.0%
AGATGTCTCCGAATTGACTA+TGG + chr8.3:1385614-1385633 None:intergenic 40.0%
AGGAAGTCAGCTTTCATCTT+TGG - chr8.3:1387113-1387132 MS.gene042158:intron 40.0%
ATACCATAACGAGAAGGAGA+AGG + chr8.3:1383378-1383397 None:intergenic 40.0%
ATATACCTCTGCCAATGCAT+GGG + chr8.3:1384240-1384259 None:intergenic 40.0%
ATGACCAAAGCTCTTTCGAA+GGG + chr8.3:1388373-1388392 None:intergenic 40.0%
ATGGATTCTTCAGGTGTCAA+TGG + chr8.3:1386639-1386658 None:intergenic 40.0%
ATTATACTCGGTCTGATTGC+AGG - chr8.3:1388538-1388557 MS.gene042158:intron 40.0%
CAATCAGCACAATCAACATC+AGG + chr8.3:1389063-1389082 None:intergenic 40.0%
CAATTTAGCCAGAAGAAGAC+GGG + chr8.3:1387438-1387457 None:intergenic 40.0%
CAATTTCGCTGATCAGAACA+TGG + chr8.3:1384436-1384455 None:intergenic 40.0%
CAGGTAACAGATGTTGACAT+GGG - chr8.3:1385822-1385841 MS.gene042158:intron 40.0%
CATGATCTGATTCTTTAGCC+CGG - chr8.3:1386009-1386028 MS.gene042158:CDS 40.0%
CATGTTCTGATCAGCGAAAT+TGG - chr8.3:1384434-1384453 MS.gene042158:intron 40.0%
CCAGCAGTTTCTTGTATTCT+GGG + chr8.3:1386150-1386169 None:intergenic 40.0%
CCGGTTACTCAATTCAACTT+TGG - chr8.3:1384819-1384838 MS.gene042158:intron 40.0%
CGAAGAAGAGAGGAAAGAAT+TGG - chr8.3:1386362-1386381 MS.gene042158:intron 40.0%
CGCTTATTTGGACGTATTGT+TGG + chr8.3:1387177-1387196 None:intergenic 40.0%
CTCTCTTTCTATTTCCCTTC+AGG - chr8.3:1383532-1383551 MS.gene042158:intron 40.0%
CTGAAGGGAAATAGAAAGAG+AGG + chr8.3:1383534-1383553 None:intergenic 40.0%
GAACGAAGTGATGATTTAGG+AGG + chr8.3:1383512-1383531 None:intergenic 40.0%
GAAGAGAGCTTGAATCAAAG+TGG + chr8.3:1387752-1387771 None:intergenic 40.0%
GAAGGAAGATGATCTGATTC+GGG + chr8.3:1383360-1383379 None:intergenic 40.0%
GAGGAACGAAGTGATGATTT+AGG + chr8.3:1383515-1383534 None:intergenic 40.0%
GCACCACAATGAACTTAACT+TGG - chr8.3:1388478-1388497 MS.gene042158:intron 40.0%
GCTATGGCAAACAATTGGAA+AGG + chr8.3:1384301-1384320 None:intergenic 40.0%
GCTTAAACTATGGACCTGTT+TGG + chr8.3:1383848-1383867 None:intergenic 40.0%
GGGAAATTATGCAAGGATGT+TGG - chr8.3:1384205-1384224 MS.gene042158:intron 40.0%
GGTGTAAAGAATGTATGTGC+AGG - chr8.3:1387331-1387350 MS.gene042158:intron 40.0%
GTAGTGTATGGAGAGATACA+AGG - chr8.3:1384863-1384882 MS.gene042158:intron 40.0%
GTTCAGACACACATACCATT+AGG + chr8.3:1384463-1384482 None:intergenic 40.0%
TATATACCTCTGCCAATGCA+TGG + chr8.3:1384241-1384260 None:intergenic 40.0%
TATTGGATTTGGGAATCGCT+TGG - chr8.3:1385917-1385936 MS.gene042158:intron 40.0%
TCAATTCGGAGACATCTATC+AGG - chr8.3:1385617-1385636 MS.gene042158:CDS 40.0%
TCCTGATATTCGGATAGTGA+GGG - chr8.3:1385665-1385684 MS.gene042158:CDS 40.0%
TCTATTGTAGTTAGCAGCAC+TGG - chr8.3:1387044-1387063 MS.gene042158:intron 40.0%
TGAACCAAAAGATTTGTGGC+AGG - chr8.3:1384381-1384400 MS.gene042158:intron 40.0%
TTATGCAAGGATGTTGGCAT+TGG - chr8.3:1384211-1384230 MS.gene042158:intron 40.0%
TTGATTGATCCCACCATTTG+CGG + chr8.3:1384638-1384657 None:intergenic 40.0%
! AGCAAGTACATAGGCTTTTC+AGG - chr8.3:1383946-1383965 MS.gene042158:intron 40.0%
! ATCCATAGGTTGACTTTGCA+TGG - chr8.3:1387462-1387481 MS.gene042158:intron 40.0%
! ATGGTGGGATCAATCAACAA+CGG - chr8.3:1384641-1384660 MS.gene042158:intron 40.0%
! CGTGTATTTGTTGGGGAAAA+TGG - chr8.3:1385184-1385203 MS.gene042158:CDS 40.0%
! GACTAATTTAGGGTACAAGC+TGG + chr8.3:1386757-1386776 None:intergenic 40.0%
! GTAAAGTAGTGGAGAGAAGA+AGG - chr8.3:1387837-1387856 MS.gene042158:intron 40.0%
! GTATTCTGGGAACAAATTGC+AGG + chr8.3:1386137-1386156 None:intergenic 40.0%
! GTCTTATTGGACCATTGGAT+CGG - chr8.3:1386202-1386221 MS.gene042158:CDS 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8.3:1385397-1385416 None:intergenic 40.0%
! TCCATAGGTTGACTTTGCAT+GGG - chr8.3:1387463-1387482 MS.gene042158:intron 40.0%
! TTTCAAGTAAAAGCTCGGCT+TGG + chr8.3:1385856-1385875 None:intergenic 40.0%
! TTTTTCATCAATGCCAGTGC+AGG + chr8.3:1386411-1386430 None:intergenic 40.0%
!! AACTCTGAAGCTCATCATAC+TGG + chr8.3:1387541-1387560 None:intergenic 40.0%
!! AATAACAGTAGAGCATTGCC+GGG + chr8.3:1386030-1386049 None:intergenic 40.0%
!! GCTGGTTCTAATTTGTATGG+AGG - chr8.3:1386708-1386727 MS.gene042158:CDS 40.0%
!! GCTTGCATTTCTCTAAAACC+TGG - chr8.3:1388668-1388687 MS.gene042158:intron 40.0%
!! TGTAGCTAACTTGTTCTTCC+AGG - chr8.3:1388927-1388946 MS.gene042158:CDS 40.0%
!! TTTTGGTTACCGCAAATGGT+GGG - chr8.3:1384626-1384645 MS.gene042158:intron 40.0%
!!! ATTTTGGTTACCGCAAATGG+TGG - chr8.3:1384625-1384644 MS.gene042158:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8.3:1385535-1385554 MS.gene042158:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8.3:1385554-1385535 None:intergenic 40.0%
ACATGTACAGACAAGGCCTA+AGG - chr8.3:1387284-1387303 MS.gene042158:intron 45.0%
ACCTGCAGCTCAAATGGTAT+TGG + chr8.3:1385951-1385970 None:intergenic 45.0%
ACTACAGTCTTTGGACTTGG+AGG - chr8.3:1385701-1385720 MS.gene042158:CDS 45.0%
AGATGTTGACATGGGAAAGG+AGG - chr8.3:1385830-1385849 MS.gene042158:intron 45.0%
ATGGTGTCCAAGAAGAAGCA+GGG + chr8.3:1384417-1384436 None:intergenic 45.0%
ATTCGGAGACATCTATCAGG+AGG - chr8.3:1385620-1385639 MS.gene042158:CDS 45.0%
ATTTGTATGGAGGTCGCTCA+CGG - chr8.3:1386718-1386737 MS.gene042158:CDS 45.0%
CAATACGTCCAAATAAGCGC+AGG - chr8.3:1387178-1387197 MS.gene042158:intron 45.0%
CACGAGAATATCCCTGATGT+TGG - chr8.3:1388698-1388717 MS.gene042158:intron 45.0%
CACTATCTGCATATCCTTGC+AGG - chr8.3:1388405-1388424 MS.gene042158:intron 45.0%
CAGCGAAATTGGGAACCTAA+TGG - chr8.3:1384445-1384464 MS.gene042158:intron 45.0%
CCAGGTAACAGATGTTGACA+TGG - chr8.3:1385821-1385840 MS.gene042158:intron 45.0%
CCATGTCAACATCTGTTACC+TGG + chr8.3:1385824-1385843 None:intergenic 45.0%
CCCAGAATACAAGAAACTGC+TGG - chr8.3:1386147-1386166 MS.gene042158:CDS 45.0%
CCTTCGATACCATAACGAGA+AGG + chr8.3:1383384-1383403 None:intergenic 45.0%
CGAAGTGATGATTTAGGAGG+TGG + chr8.3:1383509-1383528 None:intergenic 45.0%
CGCAGAAGGGAAATTATGCA+AGG - chr8.3:1384198-1384217 MS.gene042158:intron 45.0%
CTCCTGATATTCGGATAGTG+AGG - chr8.3:1385664-1385683 MS.gene042158:CDS 45.0%
CTGACTTCCTGAATCAGTCA+TGG + chr8.3:1387103-1387122 None:intergenic 45.0%
CTTCCTTCTCCTTCTCGTTA+TGG - chr8.3:1383372-1383391 MS.gene042158:intron 45.0%
CTTTCCCTTCGAAAGAGCTT+TGG - chr8.3:1388366-1388385 MS.gene042158:intron 45.0%
GATGCCACATCTGTAGTTCA+TGG - chr8.3:1385252-1385271 MS.gene042158:CDS 45.0%
GGTTTGTAATGCTGTTGTCG+TGG - chr8.3:1384795-1384814 MS.gene042158:intron 45.0%
GTTACTGGGTGAATGATCAG+TGG - chr8.3:1384983-1385002 MS.gene042158:intron 45.0%
TCAATGCCAGTGCAGGAAAA+TGG + chr8.3:1386404-1386423 None:intergenic 45.0%
TCCAATACCATTTGAGCTGC+AGG - chr8.3:1385947-1385966 MS.gene042158:intron 45.0%
TCCCATGCAAAGTCAACCTA+TGG + chr8.3:1387467-1387486 None:intergenic 45.0%
TCCCTCACTATCCGAATATC+AGG + chr8.3:1385669-1385688 None:intergenic 45.0%
TCCTTATGTGAATTTGGGGG+AGG - chr8.3:1386339-1386358 MS.gene042158:intron 45.0%
TCTTTGGACTTGGAGGCAAT+CGG - chr8.3:1385708-1385727 MS.gene042158:CDS 45.0%
TGGTGGGATCAATCAACAAC+GGG - chr8.3:1384642-1384661 MS.gene042158:intron 45.0%
TTGCTTCTTAAGAGGTTGCG+CGG - chr8.3:1386171-1386190 MS.gene042158:CDS 45.0%
! AGCATGAGGATGGATTCTTC+AGG + chr8.3:1386648-1386667 None:intergenic 45.0%
! AGTACGTGAATTTGGTGAGC+TGG + chr8.3:1383294-1383313 None:intergenic 45.0%
! CCTTCTCGTTATGGTATCGA+AGG - chr8.3:1383381-1383400 MS.gene042158:intron 45.0%
! CTACAGATGTGGCATCGAAA+TGG + chr8.3:1385248-1385267 None:intergenic 45.0%
! GCATTTGCCATGACTGATTC+AGG - chr8.3:1387093-1387112 MS.gene042158:intron 45.0%
! GGCACTGAGGATTATCGAAA+AGG + chr8.3:1387776-1387795 None:intergenic 45.0%
! GGTTCCTGCCACAAATCTTT+TGG + chr8.3:1384388-1384407 None:intergenic 45.0%
! GTGAATTTGGTGAGCTGGAA+CGG + chr8.3:1383289-1383308 None:intergenic 45.0%
! TGAGATCCATTTTCCTGCAC+TGG - chr8.3:1386395-1386414 MS.gene042158:intron 45.0%
! TGGTTCGGAGTACGTGAATT+TGG + chr8.3:1383302-1383321 None:intergenic 45.0%
! TTAGCAGCACTGGACTTCAT+AGG - chr8.3:1387054-1387073 MS.gene042158:intron 45.0%
!! ATGGATCTTAAAGAGTGCCC+CGG + chr8.3:1388122-1388141 None:intergenic 45.0%
!! CAGCTTTCATCTTTGGTGTC+TGG - chr8.3:1387120-1387139 MS.gene042158:intron 45.0%
!! CTGCTGGTTTGCTTCTTAAG+AGG - chr8.3:1386163-1386182 MS.gene042158:CDS 45.0%
!! GCACGAAGGGTACAACTTTT+TGG + chr8.3:1388438-1388457 None:intergenic 45.0%
!! TGCAGGTCTTATTGGACCAT+TGG - chr8.3:1386197-1386216 MS.gene042158:CDS 45.0%
!!! AGAGTTTTGAGGTGCACGAA+GGG + chr8.3:1388451-1388470 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8.3:1385534-1385553 MS.gene042158:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8.3:1385553-1385534 None:intergenic 45.0%
AAACGTTAACGAGTGCCTCC+GGG - chr8.3:1388101-1388120 MS.gene042158:intron 50.0%
AAGAGCAGCAAGCATGAGGA+TGG + chr8.3:1386658-1386677 None:intergenic 50.0%
AAGCCTAGGCCTACTCCTTA+GGG + chr8.3:1388754-1388773 None:intergenic 50.0%
AAGGAGTAGGCCTAGGCTTA+GGG - chr8.3:1388755-1388774 MS.gene042158:intron 50.0%
AGATTTGTGGCAGGAACCCT+TGG - chr8.3:1384390-1384409 MS.gene042158:intron 50.0%
AGCAAAAAGAGGTGGCACTG+AGG + chr8.3:1387789-1387808 None:intergenic 50.0%
AGTCATGGCAAATGCATCCG+AGG + chr8.3:1387088-1387107 None:intergenic 50.0%
CAAGAAGAAGCAGGGACCAA+GGG + chr8.3:1384409-1384428 None:intergenic 50.0%
CACTCATTCCCGTCTTCTTC+TGG - chr8.3:1387427-1387446 MS.gene042158:intron 50.0%
CAGAAGAAGACGGGAATGAG+TGG + chr8.3:1387429-1387448 None:intergenic 50.0%
CAGGCATGTCACCAACATCA+GGG + chr8.3:1388712-1388731 None:intergenic 50.0%
CATGGTGTCCAAGAAGAAGC+AGG + chr8.3:1384418-1384437 None:intergenic 50.0%
CCAACAAGATGCCGATCCAA+TGG + chr8.3:1386216-1386235 None:intergenic 50.0%
CCATTGGATCGGCATCTTGT+TGG - chr8.3:1386213-1386232 MS.gene042158:CDS 50.0%
CGGCATCTTGTTGGTCCATT+TGG - chr8.3:1386222-1386241 MS.gene042158:CDS 50.0%
CGTGCACCTCAAAACTCTCT+TGG - chr8.3:1388453-1388472 MS.gene042158:intron 50.0%
CGTTTGGCGTTATTGAGGAC+CGG - chr8.3:1386972-1386991 MS.gene042158:intron 50.0%
CTAGCAAGCCTGCGCTTATT+TGG + chr8.3:1387189-1387208 None:intergenic 50.0%
CTTCAGAGCTCAGGTCTGAA+GGG - chr8.3:1386607-1386626 MS.gene042158:intron 50.0%
GAAACGTTAACGAGTGCCTC+CGG - chr8.3:1388100-1388119 MS.gene042158:intron 50.0%
GCCTCCCCCAAATTCACATA+AGG + chr8.3:1386343-1386362 None:intergenic 50.0%
GGCTGATTGTGAGTTGCAAC+AGG - chr8.3:1384774-1384793 MS.gene042158:intron 50.0%
TAAGCCTAGGCCTACTCCTT+AGG + chr8.3:1388755-1388774 None:intergenic 50.0%
TAAGGAGTAGGCCTAGGCTT+AGG - chr8.3:1388754-1388773 MS.gene042158:intron 50.0%
TACCTTCTCCTTCAGAGCTC+AGG - chr8.3:1386598-1386617 MS.gene042158:intron 50.0%
TGCTTCTTAAGAGGTTGCGC+GGG - chr8.3:1386172-1386191 MS.gene042158:CDS 50.0%
! ATCCTCATGCTTGCTGCTCT+TGG - chr8.3:1386657-1386676 MS.gene042158:intron 50.0%
! GTGCAGCCAAGAGAGTTTTG+AGG + chr8.3:1388462-1388481 None:intergenic 50.0%
!! AATGCTTAAAGAGTGCCCCG+GGG - chr8.3:1388230-1388249 MS.gene042158:CDS 50.0%
!! AGATGATCTGATTCGGGAGC+TGG + chr8.3:1383354-1383373 None:intergenic 50.0%
!! GAATGCTTAAAGAGTGCCCC+GGG - chr8.3:1388229-1388248 MS.gene042158:CDS 50.0%
!! GGAATGCTTAAAGAGTGCCC+CGG - chr8.3:1388228-1388247 MS.gene042158:CDS 50.0%
!!! GAGAGTTTTGAGGTGCACGA+AGG + chr8.3:1388452-1388471 None:intergenic 50.0%
AACGTTAACGAGTGCCTCCG+GGG - chr8.3:1388102-1388121 MS.gene042158:intron 55.0%
AGCCAAGAGCAGCAAGCATG+AGG + chr8.3:1386662-1386681 None:intergenic 55.0%
AGGCCTACTCCTTAGGGACA+GGG + chr8.3:1388748-1388767 None:intergenic 55.0%
CCAAGAAGAAGCAGGGACCA+AGG + chr8.3:1384410-1384429 None:intergenic 55.0%
CCGAACCATTCTCCGAGACT+CGG - chr8.3:1383314-1383333 MS.gene042158:intron 55.0%
CCGAGTCTCGGAGAATGGTT+CGG + chr8.3:1383317-1383336 None:intergenic 55.0%
CCTTCAGAGCTCAGGTCTGA+AGG - chr8.3:1386606-1386625 MS.gene042158:intron 55.0%
CCTTGGTCCCTGCTTCTTCT+TGG - chr8.3:1384407-1384426 MS.gene042158:intron 55.0%
CTAAGCTGCTCCCTAAGCCT+AGG + chr8.3:1388768-1388787 None:intergenic 55.0%
CTACTCCTTAGGGACAGGGA+CGG + chr8.3:1388744-1388763 None:intergenic 55.0%
CTTCATAGGCTGTGCTGCCT+CGG - chr8.3:1387068-1387087 MS.gene042158:intron 55.0%
GCAGGCATGTCACCAACATC+AGG + chr8.3:1388713-1388732 None:intergenic 55.0%
GTAATGCTGTTGTCGTGGCC+CGG - chr8.3:1384800-1384819 MS.gene042158:intron 55.0%
TACTCCTTAGGGACAGGGAC+GGG + chr8.3:1388743-1388762 None:intergenic 55.0%
TAGGCCTACTCCTTAGGGAC+AGG + chr8.3:1388749-1388768 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCG+GGG + chr8.3:1388248-1388267 None:intergenic 55.0%
TGTCCCTAAGGAGTAGGCCT+AGG - chr8.3:1388748-1388767 MS.gene042158:intron 55.0%
! CCTTCAGACCTGAGCTCTGA+AGG + chr8.3:1386609-1386628 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+GGG + chr8.3:1388249-1388268 None:intergenic 55.0%
!! GACCTGAGCTCTGAAGGAGA+AGG + chr8.3:1386603-1386622 None:intergenic 55.0%
!! GATCTTAAAGAGTGCCCCGG+AGG + chr8.3:1388119-1388138 None:intergenic 55.0%
!! GGTCTTGTTAACGAGTGCCC+CGG + chr8.3:1388250-1388269 None:intergenic 55.0%
ACTCCTTAGGGACAGGGACG+GGG + chr8.3:1388742-1388761 None:intergenic 60.0%
CGTCCCTGTCCCTAAGGAGT+AGG - chr8.3:1388742-1388761 MS.gene042158:intron 60.0%
GTATGGAGGTCGCTCACGGT+TGG - chr8.3:1386722-1386741 MS.gene042158:CDS 60.0%
TCGGACCGAGTCTCGGAGAA+TGG + chr8.3:1383322-1383341 None:intergenic 60.0%
TTGGGGGAGGCGAAGAAGAG+AGG - chr8.3:1386352-1386371 MS.gene042158:intron 60.0%
! CGCGGGCATGCAGGTCTTAT+TGG - chr8.3:1386189-1386208 MS.gene042158:CDS 60.0%
! TGATTCGGGAGCTGGAGAGC+CGG + chr8.3:1383346-1383365 None:intergenic 60.0%
!! GGCATTGGCTGCCCATGCAT+TGG - chr8.3:1384226-1384245 MS.gene042158:intron 60.0%
AAGAGGTTGCGCGGGCATGC+AGG - chr8.3:1386180-1386199 MS.gene042158:CDS 65.0%
CTCCTTAGGGACAGGGACGG+GGG + chr8.3:1388741-1388760 None:intergenic 65.0%
TCCTTAGGGACAGGGACGGG+GGG + chr8.3:1388740-1388759 None:intergenic 65.0%
! GGCTGCCCATGCATTGGCAG+AGG - chr8.3:1384232-1384251 MS.gene042158:intron 65.0%
! CTCCGAGACTCGGTCCGAGC+CGG - chr8.3:1383324-1383343 MS.gene042158:intron 70.0%
!! AGCCGGCTCGGACCGAGTCT+CGG + chr8.3:1383329-1383348 None:intergenic 70.0%
ACAGGGACGGGGGGCTCTGC+AGG + chr8.3:1388731-1388750 None:intergenic 75.0%
CGGGAGCTGGAGAGCCGGCT+CGG + chr8.3:1383341-1383360 None:intergenic 75.0%
GCCCCCCGTCCCTGTCCCTA+AGG - chr8.3:1388736-1388755 MS.gene042158:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 1383269 1389155 1383269 ID=MS.gene042158
chr8.3 mRNA 1383269 1389155 1383269 ID=MS.gene042158.t1;Parent=MS.gene042158
chr8.3 exon 1388871 1389155 1388871 ID=MS.gene042158.t1.exon1;Parent=MS.gene042158.t1
chr8.3 CDS 1388871 1389155 1388871 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1388171 1388260 1388171 ID=MS.gene042158.t1.exon2;Parent=MS.gene042158.t1
chr8.3 CDS 1388171 1388260 1388171 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1387958 1388051 1387958 ID=MS.gene042158.t1.exon3;Parent=MS.gene042158.t1
chr8.3 CDS 1387958 1388051 1387958 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1387755 1387816 1387755 ID=MS.gene042158.t1.exon4;Parent=MS.gene042158.t1
chr8.3 CDS 1387755 1387816 1387755 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1387540 1387628 1387540 ID=MS.gene042158.t1.exon5;Parent=MS.gene042158.t1
chr8.3 CDS 1387540 1387628 1387540 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1386687 1386807 1386687 ID=MS.gene042158.t1.exon6;Parent=MS.gene042158.t1
chr8.3 CDS 1386687 1386807 1386687 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1386456 1386599 1386456 ID=MS.gene042158.t1.exon7;Parent=MS.gene042158.t1
chr8.3 CDS 1386456 1386599 1386456 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1385985 1386319 1385985 ID=MS.gene042158.t1.exon8;Parent=MS.gene042158.t1
chr8.3 CDS 1385985 1386319 1385985 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1385588 1385828 1385588 ID=MS.gene042158.t1.exon9;Parent=MS.gene042158.t1
chr8.3 CDS 1385588 1385828 1385588 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1385082 1385370 1385082 ID=MS.gene042158.t1.exon10;Parent=MS.gene042158.t1
chr8.3 CDS 1385082 1385370 1385082 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1383665 1383767 1383665 ID=MS.gene042158.t1.exon11;Parent=MS.gene042158.t1
chr8.3 CDS 1383665 1383767 1383665 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
chr8.3 exon 1383269 1383326 1383269 ID=MS.gene042158.t1.exon12;Parent=MS.gene042158.t1
chr8.3 CDS 1383269 1383326 1383269 ID=cds.MS.gene042158.t1;Parent=MS.gene042158.t1
Gene Sequence

>MS.gene042158

ATGGACGTAGATCGGAACCGTTCCAGCTCACCAAATTCACGTACTCCGAACCATTCTCCGAGACTCGGTCCGAGCCGGCTCTCCAGCTCCCGAATCAGATCATCTTCCTTCTCCTTCTCGTTATGGTATCGAAGGAAACGAGCGAAAGTGATTTTAGCACTTATTGCGTTACTCGCTTTATTTTTCTTTGTGAATTATGTTATGCTTCTTCGTCTTCAACATCAACAACAACAAGATCCACCTCCTAAATCATCACTTCGTTCCTCTCTTTCTATTTCCCTTCAGGTTTCAATTCTCATATATTAATTAATTAATATTCGCATTTCATTTTTCATTCCTATCTATCTATAGAAATTATTTAGTACCTTAGATTGTTTATTACGACATAGACACTTGTGAGATTTCTTATGGAAACTGCTTATTATTTCAACTTATATATAGTTAGATATTAATTATAATTTGTTTAATAGTTTAACTTGTTTGGAAAACTTATGAAAATAAGCTATAAACAATGCCGTAAATTGTTACTTACTGTCATAAGTTCTTATGGCAGTAGATAAGCTCAAATAAGTCAATCCAAACAGGTCCATAGTTTAAGCTAGTTAGAAGTAATTCTAATTCTAACTACCTTGCTTGAACTATATTAAACTAATTCTAATTAATATCTAACTATATCAAGCAAGTACATAGGCTTTTCAGGATTACTTATGAAAATAGCTTATATGAAAACAGCTTGACTTTATTTTATACCTTGTTATAGAAATAGCTTATAGACAAGCAGTTATATGATAACCGATTACACTATAAGCATTTAATTAAGTTGTTTGTTGAAATTGTGCCTATATCTGTTTCCTTTTGAACAAGTCTGTTGTGTTTCTGATATTTATTTTTTCAGGGAAAATCGAACAAGAGTAGTACTAAGAAAAAAACGCAGAAGGGAAATTATGCAAGGATGTTGGCATTGGCTGCCCATGCATTGGCAGAGGTATATATTTTGAAGAAAATGTGCCTAGTTTGTAGTTATATAAGCCTTTCCAATTGTTTGCCATAGCAAAGTTTTCAATTTTCAGTAACTCTGACTTGGGTATTTCACATTTGGTACAGAACAAACGTGAACCAAAAGATTTGTGGCAGGAACCCTTGGTCCCTGCTTCTTCTTGGACACCATGTTCTGATCAGCGAAATTGGGAACCTAATGGTATGTGTGTCTGAACTGAACTTCAAAATTTGACAATTGTTTGTATTATATATCTGTCCATAGCTGCAAAAAAAAAAGGCTTATTAGTCCATACTGAGTAAGAGTACTAACAGTTTGCTCTCTTCTACTCTACTACAATAGAAGGAAGTAATGGATACATTTTGGTTACCGCAAATGGTGGGATCAATCAACAACGGGTAGCTGTAAGTATTCTTTATCGGACAACACTTCTGAATCATTTGGGATTAACTTATTTGAAATGAGAAAAAAATTAATAAGCTTTATCTTAAATGATTGGCGTCATTTGGGCTGATTGTGAGTTGCAACAGGTTTGTAATGCTGTTGTCGTGGCCCGGTTACTCAATTCAACTTTGGTTATCCCAAAATTTATGTACAGTAGTGTATGGAGAGATACAAGGTAACACTATGTCCATTTCTCTCTCATTGTCATTACTCACATAATTACTCTGTTTTGTTTTCCCTATGTACTTTTTATTTGATGAAACCTAATATTTAGTTACTGGGTGAATGATCAGTGGAGAAATTGATTACTAGCGGCATGTTATAGTATGCGTGTGAAATTTGATCAACCAGAATTGGTTGAATTAAATTTATTATTCAGATAAATAGTTATAAGATTTATCAACAATTTTGGGGGATGGGTTGAATATACGACTTTATACTTTACCACTTCTAGCATTCTTGTTTTAACTTATTCGTGTATTTGTTGGGGAAAATGGCTTATTTGAATCTCTAGTTTTAGCTTTTTCTTGTTGTACCATTTCGATGCCACATCTGTAGTTCATGGCTTTTCTATTACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAAATTTGTTTCAAAATGAGTGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTCAATTGTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAATAACCATTATCTTTCTCTTAATCATTGCATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGAGGGAGTATGATTTTGTGACCGTCAATTTAACTTATAAATTTTTATATTGTATAATTCCATAGTCAATTCGGAGACATCTATCAGGAGGAGCATTTTATTAACAACTTGACTCCTGATATTCGGATAGTGAGGGAGCTTCCTAAAAAACTACAGTCTTTGGACTTGGAGGCAATCGGCAGTGTTGTAAGTCACTCCCTTCCCTTGTAGTAAGCTAATTAAACTCAACGATATGAGTCCTATTTGTATTTAATTGTTAGAAGACTTTACCAGGTAACAGATGTTGACATGGGAAAGGAGGCCAAGCCGAGCTTTTACTTGAAACACATCCTGCCTATTATACTTAAAAATCAAGTTGTTCACTTTATTGGATTTGGGAATCGCTTGGCATTTGATCCAATACCATTTGAGCTGCAGGTAAATATCCTTCGATAATTAGACATCACAATCTAATTTTCATGATCTGATTCTTTAGCCCGGCAATGCTCTACTGTTATTAACTTTCTTAATCTCAAGCCCTATTATGCTTTTCCTAATTGAGGACTTCATCTAGAGACTTCGTTGCAGATGTAATTTTCACGCCCTGCAATTTGTTCCCAGAATACAAGAAACTGCTGGTTTGCTTCTTAAGAGGTTGCGCGGGCATGCAGGTCTTATTGGACCATTGGATCGGCATCTTGTTGGTCCATTTGGAGAATTAAATTTGGAGAAGAGTGAAAAAAGTTCCATGAAAGCTTCAAAATACTTGGCTTTACATCTCAGATTTGAAATTGACATGGTAGCTCATTCCTTATGTGAATTTGGGGGAGGCGAAGAAGAGAGGAAAGAATTGGAAGCATATCGTGAGATCCATTTTCCTGCACTGGCATTGATGAAAAATACTACTAAGTATGTATCACAATTTTTTTTATCTCAACTAGTTCTTCACTTATACTGGAAACACTTGTACTCGTCTTCTTTTAAACACAATAATTTTAATTTGTGATGAAAAATGTTTTGCTCTTTAGCTACTTTGATTTAAAGTAATTGGAGTTTTCTGTGCAGATTACCTTCTCCTTCAGAGCTCAGGTCTGAAGGGCTATGTCCATTGACACCTGAAGAATCCATCCTCATGCTTGCTGCTCTTGGCTTTAACCGCAAGACAAACATATTTGTAGCTGGTTCTAATTTGTATGGAGGTCGCTCACGGTTGGCTGCTTTGACCAGCTTGTACCCTAAATTAGTCACTAAAGAGAACTTACTTTCTTCAGCGGAACTCGAACCATTTGCTAATTATTCATCTCAGGTTTGCTGCTACAGTCATTCTTGTTTCATTTATTTCAATGATGTCACAAACCTAATTAAGCTCCTTGTTACAGTAAATCCTGTTTTGTGCACTTTTCATGTTCTATATGTTCTATAAATTGCTCCTCATATTAAACGTTTGGCGTTATTGAGGACCGGATTATTTTGGTGCTGCTGTTAGTCTTTTGATGAATGACACGGAATTATTTCTATTGTAGTTAGCAGCACTGGACTTCATAGGCTGTGCTGCCTCGGATGCATTTGCCATGACTGATTCAGGAAGTCAGCTTTCATCTTTGGTGTCTGGTTATCGAATATATTATGGTGGAGGAAGAATGCCAACAATACGTCCAAATAAGCGCAGGCTTGCTAGTATATTCATGAAAAACACTACAATAGAATGGCGTGTTTTTGAACAGAGAATGAGGAAAGCTGTCAGACAAACTAAACATGTACAGACAAGGCCTAAGGCAAGAAGTGTTTATAGATATCCAAGGTGTAAAGAATGTATGTGCAGGACAATTTAATTTATTTACATAGGCTTGATTGTAATTTTCCATTGTAATTTGTAGCATTGTTAATCATTATTGCCACTCATTCCCGTCTTCTTCTGGCTAAATTGATTAATCCATAGGTTGACTTTGCATGGGATTTATTTACATTACTGTTAACAGACTAAGGCAAGAAGTGTTTACGTCAGAACCAGTATGATGAGCTTCAGAGTTCAGATCATAGGGGTTTAGGAACAAAAAAATAGTGCATTCTGCAATTTCTTAACTATCTGTTGTCACAATCTCTTGCTCTTGCCCACACAACTAAAACAAAAACAAAAACAATTGGAAATTTGAAACTAAAACTCGTTCACCTCTTTGATTTCTAAAATGTGCAAATTTTGTTTATTCAATAAATTGTTCCACTTTGATTCAAGCTCTCTTCTCCTTTTCGATAATCCTCAGTGCCACCTCTTTTTGCTTGATTTTATTTCTAAATCATATATTATGGTAAAGTAGTGGAGAGAAGAAGGAAAAAAAAAAAAAACTGAAACAACATTAAAGTTTGTTGAATAAAGTTGTTACTTGATTACTTTGAAATGAAAACGTAAATTACAAATATATAGTGCAAAGCTATACACTTGCTTGCTAAATAGAAATAAACTTTGCAGTAAATCTTCTCTAAAGAGTAAATATCACGACCTATTGTTTTTTTTACCAACTGAACAAGTATCAGTCTAATCATTACAATAACAAATATAAATAAAGTAAGGGAAACGTTAACGAGTGCCTCCGGGGCACTCTTTAAGATCCATAAGTAGTAAGTATTTTTAAAAATGCATGTAATCATTGCCTTGGAAATCGAAATATTTGATTTTTTTAAAGAATAATTGTTTATTTTGGAATGCTTAAAGAGTGCCCCGGGGCACTCGTTAACAAGACCCATAAAGTAATAATAACTATGGTAAAAAATATCAATATTCTAACACTACTCGAGATTTTTCTTGAATACTTTCACCGTTGATCTCAACTCTTCAAACTTTCCCTTCGAAAGAGCTTTGGTCATTATATTTCCAGTCACTATCTGCATATCCTTGCAGGTTAAAAACCAAAAAGTTGTACCCTTCGTGCACCTCAAAACTCTCTTGGCTGCACCACAATGAACTTAACTTGGATAATGCATAAACCTAAAAAGTAAGCTAGCAACAAACATTATACTCGGTCTGATTGCAGGAAGATACAACAAACTTCTAATTATACTTTTATAAATAGAAGCATCTGCACTATTATCAACATCATCCTTTGATAATTTTTCATTCACAATCAACAGTGTGGAAACATGCTTGCATTTCTCTAAAACCTGGAAAAACACACGAGAATATCCCTGATGTTGGTGACATGCCTGCAGAGCCCCCCGTCCCTGTCCCTAAGGAGTAGGCCTAGGCTTAGGGAGCAGCTTAGTCATTAAATTATGTGTGCATCTATGTCTCACCAAAGTAAAAAAACACAAGGCATGAAAAGGAAATTCTAGTTTGTGACGCACAAAATGTTTAGTTTTGAAATGAGGAAAACAACATAAGAAGATATTGGTGGTTGGTTTTGTAGCTAACTTGTTCTTCCAGGTTTTATAGTTGCTTCTACTATTGGCCTTGCAGTTTCCATGCCAATTTTAATATGCTCCCCTCTCAAAATAATTGTTGAAAATACCCCCCATTTTGAATTACTTACAGCTACCTGATGTTGATTGTGCTGATTGTGAGTTGCAATACAGCTATGCGTTGTTGATGATCCATTACTTCAAGAATACTCAGTATTCTTTGATCAAGTAA
Protein sequence

>MS.gene042158.t1

MDVDRNRSSSPNSRTPNHSPRLGPSRLSSSRIRSSSFSFSLWYRRKRAKVILALIALLALFFFVNYVMLLRLQHQQQQDPPPKSSLRSSLSISLQGKSNKSSTKKKTQKGNYARMLALAAHALAENKREPKDLWQEPLVPASSWTPCSDQRNWEPNEGSNGYILVTANGGINQQRVAVCNAVVVARLLNSTLVIPKFMYSSVWRDTSQFGDIYQEEHFINNLTPDIRIVRELPKKLQSLDLEAIGSVVTDVDMGKEAKPSFYLKHILPIILKNQVVHFIGFGNRLAFDPIPFELQRLRCRCNFHALQFVPRIQETAGLLLKRLRGHAGLIGPLDRHLVGPFGELNLEKSEKSSMKASKYLALHLRFEIDMVAHSLCEFGGGEEERKELEAYREIHFPALALMKNTTKLPSPSELRSEGLCPLTPEESILMLAALGFNRKTNIFVAGSNLYGGRSRLAALTSLYPKLVTKENLLSSAELEPFANYSSQLAALDFIGCAASDAFAMTDSGSQLSSLVSGYRIYYGGGRMPTIRPNKRRLASIFMKNTTIEWRVFEQRMRKAVRQTKHVQTRPKARSVYRYPRCKELWKHACISLKPGKTHENIPDVGDMPAEPPVPVPKDYALLMIHYFKNTQYSLIK