Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26505.t1 | XP_013458415.1 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.00E+00 | 1238 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26505.t1 | Q94BY4 | 69.5 | 637 | 162 | 5 | 10 | 618 | 9 | 641 | 8.4e-252 | 870.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26505.t1 | A0A072USY2 | 98.7 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0e+00 | 1238.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051819 | MS.gene26505 | 0.895111 | 1.31E-75 | -1.69E-46 |
| MS.gene057093 | MS.gene26505 | 0.806836 | 6.78E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26505 | MS.gene68984 | PPI |
| MS.gene26505 | MS.gene012669 | PPI |
| MS.gene68863 | MS.gene26505 | PPI |
| MS.gene26505 | MS.gene042158 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26505.t1 | MTR_4g125460 | 98.716 | 623 | 8 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1291 |
| MS.gene26505.t1 | MTR_4g125460 | 99.156 | 474 | 4 | 0 | 150 | 623 | 11 | 484 | 0.0 | 988 |
| MS.gene26505.t1 | MTR_4g019210 | 49.363 | 628 | 290 | 7 | 1 | 617 | 11 | 621 | 0.0 | 624 |
| MS.gene26505.t1 | MTR_5g081690 | 58.373 | 418 | 174 | 0 | 201 | 618 | 94 | 511 | 0.0 | 554 |
| MS.gene26505.t1 | MTR_5g064620 | 47.706 | 436 | 206 | 8 | 201 | 620 | 85 | 514 | 6.96e-137 | 410 |
| MS.gene26505.t1 | MTR_3g096020 | 47.454 | 432 | 214 | 6 | 199 | 620 | 161 | 589 | 2.43e-136 | 411 |
| MS.gene26505.t1 | MTR_4g082310 | 48.232 | 396 | 198 | 5 | 228 | 618 | 97 | 490 | 4.93e-134 | 402 |
| MS.gene26505.t1 | MTR_5g042200 | 48.492 | 398 | 198 | 5 | 228 | 620 | 85 | 480 | 1.26e-133 | 400 |
| MS.gene26505.t1 | MTR_3g099480 | 47.073 | 427 | 213 | 6 | 201 | 617 | 114 | 537 | 8.78e-133 | 400 |
| MS.gene26505.t1 | MTR_2g059350 | 49.235 | 392 | 190 | 5 | 227 | 611 | 114 | 503 | 1.76e-130 | 393 |
| MS.gene26505.t1 | MTR_4g110030 | 49.367 | 395 | 185 | 6 | 227 | 611 | 115 | 504 | 1.82e-130 | 393 |
| MS.gene26505.t1 | MTR_6g016015 | 48.724 | 392 | 192 | 5 | 227 | 611 | 114 | 503 | 3.81e-130 | 392 |
| MS.gene26505.t1 | MTR_4g100810 | 38.876 | 427 | 237 | 11 | 201 | 618 | 79 | 490 | 8.86e-92 | 294 |
| MS.gene26505.t1 | MTR_3g115220 | 39.059 | 425 | 239 | 11 | 201 | 618 | 82 | 493 | 1.60e-88 | 286 |
| MS.gene26505.t1 | MTR_3g086570 | 36.384 | 448 | 248 | 12 | 195 | 617 | 112 | 547 | 1.92e-88 | 285 |
| MS.gene26505.t1 | MTR_5g099010 | 37.875 | 433 | 240 | 10 | 201 | 622 | 90 | 504 | 2.60e-87 | 283 |
| MS.gene26505.t1 | MTR_3g026650 | 36.706 | 425 | 253 | 7 | 200 | 617 | 141 | 556 | 1.26e-86 | 281 |
| MS.gene26505.t1 | MTR_1g031590 | 36.626 | 486 | 266 | 16 | 155 | 617 | 80 | 546 | 8.34e-86 | 278 |
| MS.gene26505.t1 | MTR_5g012770 | 37.963 | 432 | 235 | 11 | 195 | 618 | 89 | 495 | 1.29e-85 | 276 |
| MS.gene26505.t1 | MTR_4g084570 | 37.029 | 451 | 246 | 14 | 194 | 622 | 118 | 552 | 1.83e-84 | 275 |
| MS.gene26505.t1 | MTR_4g023030 | 36.279 | 430 | 254 | 8 | 197 | 617 | 198 | 616 | 7.30e-81 | 267 |
| MS.gene26505.t1 | MTR_3g005340 | 36.795 | 443 | 239 | 13 | 196 | 618 | 124 | 545 | 6.19e-79 | 261 |
| MS.gene26505.t1 | MTR_5g032100 | 34.632 | 462 | 249 | 11 | 196 | 618 | 55 | 502 | 9.27e-79 | 258 |
| MS.gene26505.t1 | MTR_3g100310 | 35.000 | 460 | 246 | 12 | 199 | 619 | 72 | 517 | 2.78e-76 | 252 |
| MS.gene26505.t1 | MTR_3g026650 | 37.822 | 349 | 208 | 5 | 200 | 541 | 141 | 487 | 7.22e-75 | 248 |
| MS.gene26505.t1 | MTR_1g102030 | 36.712 | 444 | 236 | 13 | 201 | 619 | 61 | 484 | 1.12e-74 | 248 |
| MS.gene26505.t1 | MTR_5g059260 | 36.879 | 423 | 237 | 12 | 216 | 617 | 146 | 559 | 1.23e-72 | 244 |
| MS.gene26505.t1 | MTR_4g010990 | 33.958 | 427 | 247 | 12 | 199 | 620 | 45 | 441 | 4.57e-64 | 218 |
| MS.gene26505.t1 | MTR_3g086570 | 37.267 | 322 | 175 | 8 | 195 | 492 | 112 | 430 | 7.90e-64 | 217 |
| MS.gene26505.t1 | MTR_2g016470 | 32.118 | 439 | 240 | 10 | 227 | 618 | 188 | 615 | 4.58e-63 | 219 |
| MS.gene26505.t1 | MTR_4g010990 | 33.508 | 382 | 220 | 11 | 243 | 620 | 1 | 352 | 8.71e-56 | 193 |
| MS.gene26505.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 38 | 494 | 1.92e-55 | 196 |
| MS.gene26505.t1 | MTR_1g101990 | 39.116 | 294 | 159 | 9 | 332 | 619 | 1 | 280 | 3.80e-55 | 190 |
| MS.gene26505.t1 | MTR_4g132590 | 29.574 | 470 | 267 | 12 | 201 | 619 | 137 | 593 | 2.09e-54 | 195 |
| MS.gene26505.t1 | MTR_3g026650 | 37.548 | 261 | 155 | 4 | 200 | 454 | 141 | 399 | 8.00e-51 | 181 |
| MS.gene26505.t1 | MTR_3g092590 | 30.982 | 326 | 208 | 6 | 197 | 505 | 58 | 383 | 3.10e-38 | 149 |
| MS.gene26505.t1 | MTR_3g092590 | 30.675 | 326 | 209 | 6 | 197 | 505 | 58 | 383 | 4.72e-38 | 150 |
| MS.gene26505.t1 | MTR_7g017330 | 31.757 | 296 | 184 | 7 | 226 | 504 | 96 | 390 | 9.04e-37 | 146 |
| MS.gene26505.t1 | MTR_7g064210 | 43.023 | 172 | 79 | 5 | 345 | 503 | 25 | 190 | 8.75e-34 | 134 |
| MS.gene26505.t1 | MTR_1g007390 | 29.217 | 332 | 212 | 7 | 197 | 505 | 58 | 389 | 1.98e-31 | 130 |
| MS.gene26505.t1 | MTR_1g101985 | 46.078 | 102 | 55 | 0 | 201 | 302 | 61 | 162 | 1.50e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26505.t1 | AT5G35570 | 70.047 | 641 | 152 | 7 | 10 | 618 | 9 | 641 | 0.0 | 899 |
| MS.gene26505.t1 | AT2G37980 | 66.187 | 417 | 141 | 0 | 201 | 617 | 199 | 615 | 0.0 | 618 |
| MS.gene26505.t1 | AT3G54100 | 51.180 | 551 | 247 | 5 | 75 | 617 | 75 | 611 | 0.0 | 597 |
| MS.gene26505.t1 | AT5G01100 | 61.593 | 427 | 160 | 2 | 196 | 619 | 185 | 610 | 0.0 | 582 |
| MS.gene26505.t1 | AT1G14020 | 50.505 | 396 | 189 | 5 | 228 | 618 | 91 | 484 | 5.88e-139 | 414 |
| MS.gene26505.t1 | AT5G15740 | 50.513 | 390 | 184 | 5 | 229 | 611 | 107 | 494 | 1.64e-133 | 400 |
| MS.gene26505.t1 | AT2G03280 | 48.974 | 390 | 192 | 5 | 228 | 611 | 88 | 476 | 6.82e-130 | 390 |
| MS.gene26505.t1 | AT1G22460 | 44.907 | 432 | 227 | 6 | 201 | 623 | 134 | 563 | 1.85e-128 | 390 |
| MS.gene26505.t1 | AT3G02250 | 48.724 | 392 | 192 | 5 | 227 | 611 | 105 | 494 | 3.65e-128 | 387 |
| MS.gene26505.t1 | AT5G64600 | 44.780 | 431 | 225 | 6 | 200 | 620 | 90 | 517 | 8.24e-126 | 381 |
| MS.gene26505.t1 | AT2G03280 | 45.803 | 417 | 192 | 6 | 228 | 611 | 88 | 503 | 1.25e-123 | 375 |
| MS.gene26505.t1 | AT5G63390 | 38.009 | 442 | 257 | 8 | 190 | 623 | 122 | 554 | 5.37e-93 | 298 |
| MS.gene26505.t1 | AT1G20550 | 37.923 | 443 | 244 | 12 | 186 | 618 | 69 | 490 | 2.24e-88 | 286 |
| MS.gene26505.t1 | AT3G26370 | 37.621 | 412 | 227 | 9 | 227 | 619 | 157 | 557 | 7.22e-88 | 284 |
| MS.gene26505.t1 | AT1G76270 | 38.283 | 431 | 237 | 12 | 199 | 618 | 75 | 487 | 1.62e-87 | 283 |
| MS.gene26505.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.44e-87 | 282 |
| MS.gene26505.t1 | AT4G16650 | 40.421 | 428 | 229 | 12 | 201 | 618 | 93 | 504 | 2.44e-87 | 282 |
| MS.gene26505.t1 | AT4G38390 | 37.241 | 435 | 248 | 10 | 199 | 623 | 92 | 511 | 1.93e-86 | 280 |
| MS.gene26505.t1 | AT1G04910 | 36.703 | 455 | 246 | 12 | 174 | 618 | 53 | 475 | 4.66e-85 | 276 |
| MS.gene26505.t1 | AT2G44500 | 37.011 | 435 | 253 | 10 | 199 | 623 | 144 | 567 | 5.36e-84 | 274 |
| MS.gene26505.t1 | AT1G35510 | 33.929 | 560 | 317 | 15 | 79 | 618 | 31 | 557 | 2.24e-83 | 273 |
| MS.gene26505.t1 | AT1G14970 | 35.714 | 448 | 254 | 12 | 195 | 622 | 4 | 437 | 2.94e-82 | 266 |
| MS.gene26505.t1 | AT1G14970 | 37.440 | 414 | 229 | 10 | 228 | 622 | 9 | 411 | 3.79e-82 | 265 |
| MS.gene26505.t1 | AT3G07900 | 34.182 | 550 | 297 | 19 | 105 | 617 | 51 | 572 | 3.94e-82 | 270 |
| MS.gene26505.t1 | AT5G65470 | 35.637 | 463 | 243 | 13 | 196 | 617 | 54 | 502 | 2.02e-81 | 266 |
| MS.gene26505.t1 | AT4G24530 | 35.217 | 460 | 247 | 11 | 198 | 619 | 72 | 518 | 3.25e-81 | 265 |
| MS.gene26505.t1 | AT1G14970 | 35.892 | 443 | 250 | 12 | 200 | 622 | 129 | 557 | 2.16e-80 | 265 |
| MS.gene26505.t1 | AT1G38065 | 36.721 | 433 | 243 | 13 | 206 | 617 | 6 | 428 | 2.51e-80 | 261 |
| MS.gene26505.t1 | AT1G38065 | 37.046 | 413 | 231 | 11 | 226 | 617 | 34 | 438 | 3.70e-80 | 261 |
| MS.gene26505.t1 | AT1G38131 | 35.892 | 482 | 259 | 17 | 170 | 617 | 92 | 557 | 3.73e-79 | 262 |
| MS.gene26505.t1 | AT2G01480 | 37.108 | 415 | 231 | 10 | 227 | 622 | 153 | 556 | 2.19e-78 | 259 |
| MS.gene26505.t1 | AT2G01480 | 39.394 | 363 | 198 | 8 | 227 | 570 | 153 | 512 | 1.60e-73 | 245 |
| MS.gene26505.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.79e-63 | 217 |
| MS.gene26505.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 44 | 494 | 2.79e-63 | 217 |
| MS.gene26505.t1 | AT1G29200 | 32.692 | 468 | 252 | 13 | 197 | 618 | 160 | 610 | 2.45e-62 | 218 |
| MS.gene26505.t1 | AT1G62330 | 30.480 | 479 | 264 | 13 | 193 | 617 | 186 | 649 | 8.44e-62 | 217 |
| MS.gene26505.t1 | AT1G11990 | 32.579 | 442 | 257 | 13 | 201 | 617 | 163 | 588 | 2.29e-60 | 212 |
| MS.gene26505.t1 | AT1G52630 | 35.027 | 374 | 229 | 10 | 200 | 570 | 45 | 407 | 1.53e-59 | 206 |
| MS.gene26505.t1 | AT1G29200 | 32.870 | 432 | 232 | 11 | 233 | 618 | 1 | 420 | 2.71e-58 | 202 |
| MS.gene26505.t1 | AT1G11990 | 29.352 | 494 | 271 | 14 | 186 | 617 | 133 | 610 | 8.00e-54 | 194 |
| MS.gene26505.t1 | AT1G52630 | 33.939 | 330 | 205 | 9 | 243 | 570 | 1 | 319 | 7.49e-50 | 177 |
| MS.gene26505.t1 | AT2G44500 | 39.098 | 266 | 149 | 7 | 199 | 455 | 144 | 405 | 8.03e-50 | 179 |
| MS.gene26505.t1 | AT3G26370 | 40.367 | 218 | 118 | 3 | 227 | 434 | 157 | 372 | 4.60e-48 | 173 |
| MS.gene26505.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 3.77e-38 | 150 |
| MS.gene26505.t1 | AT3G30300 | 31.864 | 295 | 185 | 7 | 226 | 504 | 98 | 392 | 3.77e-38 | 150 |
| MS.gene26505.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.88e-37 | 147 |
| MS.gene26505.t1 | AT3G03810 | 29.394 | 330 | 216 | 6 | 193 | 505 | 53 | 382 | 3.88e-37 | 147 |
Find 145 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTGCCCTTCATTTA+AGG | 0.061402 | 8.1:-6740719 | MS.gene26505:intron |
| CTTAGTTTCTGTATGGATTT+TGG | 0.094858 | 8.1:+6740834 | None:intergenic |
| GAATCCATTGCTGTAGATTT+TGG | 0.128439 | 8.1:-6743700 | MS.gene26505:CDS |
| TTGTGGGGTTTGTTTGTTTA+TGG | 0.153331 | 8.1:-6743632 | MS.gene26505:CDS |
| TCAGCTCCAGTTGAAGAATT+TGG | 0.157549 | 8.1:-6740780 | MS.gene26505:CDS |
| ATATATTTGTAGTGGCTTTA+AGG | 0.177091 | 8.1:-6741309 | MS.gene26505:intron |
| AGATCACTTTGTGCTGATTT+AGG | 0.226086 | 8.1:+6740898 | None:intergenic |
| TGTGGGGTTTGTTTGTTTAT+GGG | 0.262109 | 8.1:-6743631 | MS.gene26505:CDS |
| GAAGTTTCCCTCGGAGTTAA+TGG | 0.272926 | 8.1:+6740423 | None:intergenic |
| CTCTAACACTTCTTCCGATC+TGG | 0.279645 | 8.1:+6743813 | None:intergenic |
| TTACACTTACGATGGAAATA+TGG | 0.280890 | 8.1:-6740178 | MS.gene26505:CDS |
| TTATTACTTGTCTGGATTGA+TGG | 0.287803 | 8.1:+6740110 | None:intergenic |
| AAAGATATGCTTGCATTTAC+TGG | 0.303129 | 8.1:-6740564 | MS.gene26505:CDS |
| GCCTAAATCAGATGAGATTT+GGG | 0.307013 | 8.1:-6741932 | MS.gene26505:CDS |
| GTTACCTTGGACCAAGATAT+TGG | 0.310172 | 8.1:+6741182 | None:intergenic |
| TAAAAGCTTTCTTCTAGCTT+TGG | 0.313521 | 8.1:+6739828 | None:intergenic |
| TATATTCTTGTAAATGCTAA+TGG | 0.320383 | 8.1:-6741957 | MS.gene26505:CDS |
| GGCCTAAATCAGATGAGATT+TGG | 0.323892 | 8.1:-6741933 | MS.gene26505:CDS |
| TGGACGAAGGAAACATTTCT+TGG | 0.328674 | 8.1:-6739929 | MS.gene26505:CDS |
| ATGCATAACCAAGGGATCTT+TGG | 0.337730 | 8.1:+6742363 | None:intergenic |
| TTATGAATTTATTACTTGTC+TGG | 0.340259 | 8.1:+6740102 | None:intergenic |
| AGAACCTCTGTCTTGTAATA+AGG | 0.342668 | 8.1:+6740927 | None:intergenic |
| GCTCACGACGGCGGCGCCGC+TGG | 0.353800 | 8.1:+6743885 | None:intergenic |
| CCCCAAATCTCATCTGATTT+AGG | 0.364358 | 8.1:+6741931 | None:intergenic |
| CATGTTTCTCAGAGAGTTCA+TGG | 0.366893 | 8.1:-6743757 | MS.gene26505:CDS |
| ATATTCTTGTAAATGCTAAT+GGG | 0.370728 | 8.1:-6741956 | MS.gene26505:CDS |
| TTGTTTCCAAATTCTTCAAC+TGG | 0.375807 | 8.1:+6740774 | None:intergenic |
| CTCTTGATCATACCTCGTAC+TGG | 0.377344 | 8.1:-6741770 | MS.gene26505:CDS |
| GTTCTTAAGATTTGTGCTAC+TGG | 0.378409 | 8.1:-6743607 | MS.gene26505:CDS |
| GCTGGCGTTGTTGCGTTTGA+AGG | 0.378895 | 8.1:+6743903 | None:intergenic |
| ATTTCACTCATACTGATTCC+CGG | 0.381505 | 8.1:-6740875 | MS.gene26505:CDS |
| ATTTGTGCTACTGGTTGGCT+TGG | 0.404875 | 8.1:-6743598 | MS.gene26505:CDS |
| ACGGCATCTTAGTTTCTGTA+TGG | 0.405367 | 8.1:+6740827 | None:intergenic |
| GATCCCTTGGTTATGCATAT+AGG | 0.412263 | 8.1:-6742358 | MS.gene26505:CDS |
| TTGATGCCAGATATGTGATA+TGG | 0.414143 | 8.1:-6741835 | MS.gene26505:intron |
| GATGTATTTGTGAAACAAAA+AGG | 0.414230 | 8.1:-6739788 | MS.gene26505:CDS |
| TGAAGAATTTGGAAACAAAC+TGG | 0.414484 | 8.1:-6740769 | MS.gene26505:CDS |
| GAGGAATGAGAGAAAATGTT+GGG | 0.415495 | 8.1:+6740297 | None:intergenic |
| CAAAGGCTGTACAAGGTCAT+AGG | 0.418033 | 8.1:-6740155 | MS.gene26505:CDS |
| TCTCCCGACTCTCTTAGATA+TGG | 0.420573 | 8.1:+6739855 | None:intergenic |
| AGCGGCGCCGCCGTCGTGAG+CGG | 0.421522 | 8.1:-6743883 | MS.gene26505:CDS |
| GGCGCCGCCGTCGTGAGCGG+CGG | 0.429371 | 8.1:-6743880 | MS.gene26505:CDS |
| CTTAAATGAAGGGCAAGATA+AGG | 0.435686 | 8.1:+6740720 | None:intergenic |
| TGATGACCATGCTTCGAAAC+AGG | 0.444891 | 8.1:+6743790 | None:intergenic |
| TTATTCAGGAATCAGAAGTC+TGG | 0.451320 | 8.1:-6742158 | MS.gene26505:intron |
| ACTCTAAAGACGGTAGAAAC+AGG | 0.453735 | 8.1:-6742311 | MS.gene26505:CDS |
| AGTTCATGGTGGAGTTGTGA+AGG | 0.456224 | 8.1:-6743743 | MS.gene26505:CDS |
| GTGGTAATGTCTCTACTATA+TGG | 0.459710 | 8.1:+6741240 | None:intergenic |
| TTAAGATTTGTGCTACTGGT+TGG | 0.473916 | 8.1:-6743603 | MS.gene26505:CDS |
| ACCAAGTGCTCTAAGTAGTA+AGG | 0.476802 | 8.1:+6740401 | None:intergenic |
| AGAGGAATGAGAGAAAATGT+TGG | 0.478418 | 8.1:+6740296 | None:intergenic |
| ATTTAGATTATCAATTCCAT+TGG | 0.478712 | 8.1:+6742394 | None:intergenic |
| TGCGCCGCCGCTCACGACGG+CGG | 0.479810 | 8.1:+6743876 | None:intergenic |
| TCTAACACTTCTTCCGATCT+GGG | 0.482101 | 8.1:+6743814 | None:intergenic |
| TCCTTACTACTTAGAGCACT+TGG | 0.482113 | 8.1:-6740402 | MS.gene26505:CDS |
| TTCTAGAGAGATCGATACAT+TGG | 0.484943 | 8.1:+6742109 | None:intergenic |
| GTCAACAGTCCACGTTTCTC+CGG | 0.492159 | 8.1:-6743949 | MS.gene26505:CDS |
| ACCAGGATTTACCTCGTAGC+TGG | 0.496065 | 8.1:-6740366 | MS.gene26505:CDS |
| GACTGAGCACGGCGAGTCAT+CGG | 0.499416 | 8.1:+6743925 | None:intergenic |
| CACTTTGTGCTGATTTAGGA+GGG | 0.499730 | 8.1:+6740902 | None:intergenic |
| AATGCCATTGTTAGCAAGCC+GGG | 0.500019 | 8.1:+6740857 | None:intergenic |
| ATGTAACTTACCTTAAATGA+AGG | 0.501429 | 8.1:+6740709 | None:intergenic |
| AATCATCAAAACATGTTGGC+TGG | 0.502313 | 8.1:-6740240 | MS.gene26505:CDS |
| TGTTAAACTTGTTGATCAGT+TGG | 0.504716 | 8.1:-6739949 | MS.gene26505:CDS |
| CTCGTAGCTGGAGAAGCATA+TGG | 0.507275 | 8.1:-6740354 | MS.gene26505:CDS |
| TCCAGCTACGAGGTAAATCC+TGG | 0.509294 | 8.1:+6740365 | None:intergenic |
| GCTGGAGAAGCATATGGAAG+AGG | 0.516557 | 8.1:-6740348 | MS.gene26505:CDS |
| GCTCCATATCTAAGAGAGTC+GGG | 0.517325 | 8.1:-6739858 | MS.gene26505:CDS |
| ACATTACCACCTACCTATGC+TGG | 0.518139 | 8.1:-6741227 | MS.gene26505:CDS |
| TCTAGAGAGATCGATACATT+GGG | 0.518334 | 8.1:+6742110 | None:intergenic |
| TTAGAGCCTGTTTCGAAGCA+TGG | 0.520711 | 8.1:-6743796 | MS.gene26505:CDS |
| GCTTTAAGGATTTGTTTGAC+TGG | 0.524080 | 8.1:-6741295 | MS.gene26505:CDS |
| TGCGATATGAAGTTGGTCAC+TGG | 0.528729 | 8.1:-6740494 | MS.gene26505:CDS |
| GAATGCCATTGTTAGCAAGC+CGG | 0.531220 | 8.1:+6740856 | None:intergenic |
| CAAGAATCATCAAAACATGT+TGG | 0.532621 | 8.1:-6740244 | MS.gene26505:CDS |
| TCACTTTGTGCTGATTTAGG+AGG | 0.533556 | 8.1:+6740901 | None:intergenic |
| CTAGTGGACCAAAGATCCCT+TGG | 0.537712 | 8.1:-6742371 | MS.gene26505:CDS |
| AAGAGATTAATGGGACTGAA+AGG | 0.537759 | 8.1:-6740464 | MS.gene26505:CDS |
| AAATCCAAAATCTACAGCAA+TGG | 0.538935 | 8.1:+6743696 | None:intergenic |
| AAGAAATACGTCACTCTGAA+GGG | 0.538954 | 8.1:+6740200 | None:intergenic |
| TTTGTTTCACAAATACATCC+TGG | 0.544979 | 8.1:+6739792 | None:intergenic |
| TCTTGATCATACCTCGTACT+GGG | 0.547240 | 8.1:-6741769 | MS.gene26505:CDS |
| GTTCATGGTGGAGTTGTGAA+GGG | 0.550601 | 8.1:-6743742 | MS.gene26505:CDS |
| TATTCTTGTAAATGCTAATG+GGG | 0.555729 | 8.1:-6741955 | MS.gene26505:CDS |
| AAAGAAATACGTCACTCTGA+AGG | 0.556265 | 8.1:+6740199 | None:intergenic |
| GAGTGCGCCGCCGCTCACGA+CGG | 0.556672 | 8.1:+6743873 | None:intergenic |
| GACTCGCTGTGAAACTCCAT+CGG | 0.558940 | 8.1:+6743969 | None:intergenic |
| AGGCAGATGCGATATGAAGT+TGG | 0.559121 | 8.1:-6740501 | MS.gene26505:CDS |
| AACTCCAATATCTTGGTCCA+AGG | 0.559526 | 8.1:-6741186 | MS.gene26505:intron |
| AATTGATAATCTAAATCTAG+TGG | 0.566115 | 8.1:-6742387 | MS.gene26505:CDS |
| TGCGTTTGAAGGACTGAGCA+CGG | 0.566234 | 8.1:+6743914 | None:intergenic |
| GCAAATCAACTCACCCAGAT+CGG | 0.567377 | 8.1:-6743827 | MS.gene26505:CDS |
| GTATCTAGAATGCAGCAGAA+TGG | 0.567600 | 8.1:-6740747 | MS.gene26505:CDS |
| TTCTCTGAATCAAATTCCGA+TGG | 0.568476 | 8.1:-6743985 | MS.gene26505:CDS |
| GTATTTCTTTACACTTACGA+TGG | 0.568480 | 8.1:-6740186 | MS.gene26505:CDS |
| AATATGGCAAAGGCTGTACA+AGG | 0.568533 | 8.1:-6740162 | MS.gene26505:CDS |
| TGTAACTTACCTTAAATGAA+GGG | 0.580244 | 8.1:+6740710 | None:intergenic |
| AGGTAAATCCTGGTGTGTGA+TGG | 0.580546 | 8.1:+6740375 | None:intergenic |
| TGCTCCATATCTAAGAGAGT+CGG | 0.582757 | 8.1:-6739859 | MS.gene26505:CDS |
| ACTGAAAGGAGATTGCTTGG+TGG | 0.582839 | 8.1:-6740450 | MS.gene26505:CDS |
| GGGACTGAAAGGAGATTGCT+TGG | 0.582857 | 8.1:-6740453 | MS.gene26505:CDS |
| TGCTGTTGCTAAGATTATGA+AGG | 0.586237 | 8.1:-6741811 | MS.gene26505:CDS |
| CAGGAACTATCTGACTCCAA+TGG | 0.586261 | 8.1:-6742410 | MS.gene26505:CDS |
| CCTCGTACTGGGCTGATCAG+AGG | 0.593327 | 8.1:-6741758 | MS.gene26505:intron |
| TCACAAATACATCCTGGCAG+AGG | 0.595231 | 8.1:+6739798 | None:intergenic |
| ACGGTAGAAACAGGAGTAGG+TGG | 0.604533 | 8.1:-6742302 | MS.gene26505:CDS |
| CTTGTTGATCAGTTGGACGA+AGG | 0.609235 | 8.1:-6739942 | MS.gene26505:CDS |
| TATGCATATAGGAGTCAAGA+AGG | 0.609346 | 8.1:-6742347 | MS.gene26505:CDS |
| ATTTACAAGAATATATCCGT+TGG | 0.609999 | 8.1:+6741965 | None:intergenic |
| GAGTTCTCACTTTAGCAGTG+TGG | 0.611281 | 8.1:+6742276 | None:intergenic |
| TACGAGGTATGATCAAGAGA+AGG | 0.612224 | 8.1:+6741774 | None:intergenic |
| GAACGGCTGAATTCCAGCAT+AGG | 0.612438 | 8.1:+6741214 | None:intergenic |
| TAGGAGTCAAGAAGGAGATG+TGG | 0.612654 | 8.1:-6742339 | MS.gene26505:CDS |
| CATGAACTCTCTGAGAAACA+TGG | 0.613005 | 8.1:+6743758 | None:intergenic |
| ATATGAAGTTGGTCACTGGA+AGG | 0.616768 | 8.1:-6740490 | MS.gene26505:CDS |
| AGGAATGAGAGAAAATGTTG+GGG | 0.617224 | 8.1:+6740298 | None:intergenic |
| TTCAAACGCAACAACGCCAG+CGG | 0.618988 | 8.1:-6743901 | MS.gene26505:CDS |
| AGTAGTAAGGAAGTTTCCCT+CGG | 0.625299 | 8.1:+6740414 | None:intergenic |
| TGGCTGTCCATTAACTCCGA+GGG | 0.625425 | 8.1:-6740430 | MS.gene26505:CDS |
| TTAGATATGGAGCACCGTCA+CGG | 0.628621 | 8.1:+6739868 | None:intergenic |
| GACTCCTATATGCATAACCA+AGG | 0.629127 | 8.1:+6742354 | None:intergenic |
| ACTTTGTGCTGATTTAGGAG+GGG | 0.633477 | 8.1:+6740903 | None:intergenic |
| GATTCCCGGCTTGCTAACAA+TGG | 0.643017 | 8.1:-6740861 | MS.gene26505:CDS |
| TCTACAGCAATGGATTCAAG+TGG | 0.648308 | 8.1:+6743706 | None:intergenic |
| TCAATGCTCTGTAGTTTACA+CGG | 0.649185 | 8.1:+6740808 | None:intergenic |
| AGCACGGCGAGTCATCGGAC+CGG | 0.656467 | 8.1:+6743930 | None:intergenic |
| GGTTCCTTATTACAAGACAG+AGG | 0.658750 | 8.1:-6740931 | MS.gene26505:CDS |
| CTCATCTTCAGAAGACAGAG+AGG | 0.659368 | 8.1:+6740278 | None:intergenic |
| GTCATCGGACCGGAGAAACG+TGG | 0.662543 | 8.1:+6743940 | None:intergenic |
| CCTCTGATCAGCCCAGTACG+AGG | 0.668444 | 8.1:+6741758 | None:intergenic |
| TGAATTCCAGCATAGGTAGG+TGG | 0.669854 | 8.1:+6741221 | None:intergenic |
| ACTCCTATATGCATAACCAA+GGG | 0.670117 | 8.1:+6742355 | None:intergenic |
| TTACGATGGAAATATGGCAA+AGG | 0.670267 | 8.1:-6740172 | MS.gene26505:CDS |
| GTGCTAGATGCAAAGACCAA+CGG | 0.675801 | 8.1:-6741981 | MS.gene26505:CDS |
| GTGGCTGTCCATTAACTCCG+AGG | 0.677303 | 8.1:-6740431 | MS.gene26505:CDS |
| AAGACGGTAGAAACAGGAGT+AGG | 0.677819 | 8.1:-6742305 | MS.gene26505:CDS |
| AGGAAGTATGAAATATCTCG+AGG | 0.678236 | 8.1:-6740328 | MS.gene26505:CDS |
| GGCTGAATTCCAGCATAGGT+AGG | 0.679350 | 8.1:+6741218 | None:intergenic |
| ATTCTTGTAAATGCTAATGG+GGG | 0.683438 | 8.1:-6741954 | MS.gene26505:CDS |
| TGTGGAACGAACTCTAAAGA+CGG | 0.684864 | 8.1:-6742321 | MS.gene26505:CDS |
| CAGAAGAAGATGAAGAACTG+AGG | 0.686563 | 8.1:-6740521 | MS.gene26505:CDS |
| CCTAAATCAGATGAGATTTG+GGG | 0.710208 | 8.1:-6741931 | MS.gene26505:intron |
| CATATGCTTCTCCAGCTACG+AGG | 0.722282 | 8.1:+6740355 | None:intergenic |
| AAACTTCATAGAGACCGTGA+CGG | 0.726293 | 8.1:-6739882 | MS.gene26505:CDS |
| GTTTCTCAGAGAGTTCATGG+TGG | 0.759850 | 8.1:-6743754 | MS.gene26505:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTTACTTTTTATC+AGG | - | chr8.1:6741344-6741363 | MS.gene26505:intron | 10.0% |
| !! | AATTTATAGTGTTTATTTAC+AGG | - | chr8.1:6742821-6742840 | MS.gene26505:intron | 15.0% |
| !! | AGTAAAATAATTTACTTAGT+AGG | + | chr8.1:6741337-6741356 | None:intergenic | 15.0% |
| !! | TTTAACAATGTTTCAAATTA+CGG | - | chr8.1:6742792-6742811 | MS.gene26505:intron | 15.0% |
| !!! | AATTTGAAACATTGTTAAAA+GGG | + | chr8.1:6742791-6742810 | None:intergenic | 15.0% |
| !!! | TAATTTGAAACATTGTTAAA+AGG | + | chr8.1:6742792-6742811 | None:intergenic | 15.0% |
| !! | AAAAAATTATTGAAAGTGAG+TGG | + | chr8.1:6741767-6741786 | None:intergenic | 20.0% |
| !! | AAATCTTGTATCAACTAATA+TGG | + | chr8.1:6742146-6742165 | None:intergenic | 20.0% |
| !! | AATATTTAAGCACTTCAAAA+TGG | + | chr8.1:6740471-6740490 | None:intergenic | 20.0% |
| !! | AGAATTAGATAGATCATTAT+CGG | - | chr8.1:6740901-6740920 | MS.gene26505:CDS | 20.0% |
| !! | AGCTATCTTATTAGTTATAA+TGG | - | chr8.1:6740757-6740776 | MS.gene26505:CDS | 20.0% |
| !! | ATAACTAATAAGATAGCTAT+GGG | + | chr8.1:6740755-6740774 | None:intergenic | 20.0% |
| !! | ATATTCTTGTAAATGCTAAT+GGG | - | chr8.1:6741817-6741836 | MS.gene26505:CDS | 20.0% |
| !! | ATTTAGATTATCAATTCCAT+TGG | + | chr8.1:6741382-6741401 | None:intergenic | 20.0% |
| !! | CTATCTTATTAGTTATAATG+GGG | - | chr8.1:6740759-6740778 | MS.gene26505:CDS | 20.0% |
| !! | GCTATCTTATTAGTTATAAT+GGG | - | chr8.1:6740758-6740777 | MS.gene26505:CDS | 20.0% |
| !! | TATAACTAATAAGATAGCTA+TGG | + | chr8.1:6740756-6740775 | None:intergenic | 20.0% |
| !! | TATATTCTTGTAAATGCTAA+TGG | - | chr8.1:6741816-6741835 | MS.gene26505:CDS | 20.0% |
| !! | TCTGATGTTATATTATAAGA+AGG | - | chr8.1:6741880-6741899 | MS.gene26505:intron | 20.0% |
| !! | TTATGAATTTATTACTTGTC+TGG | + | chr8.1:6743674-6743693 | None:intergenic | 20.0% |
| !! | TTGTTTCAATATATTTGTAG+TGG | - | chr8.1:6742456-6742475 | MS.gene26505:intron | 20.0% |
| !!! | AATTGATAATCTAAATCTAG+TGG | - | chr8.1:6741386-6741405 | MS.gene26505:intron | 20.0% |
| !!! | ATTAAATAAATTTTGAGCAC+AGG | + | chr8.1:6742622-6742641 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTTTTGGATTTTA+TGG | - | chr8.1:6740423-6740442 | MS.gene26505:CDS | 20.0% |
| ! | AAACAAAAGAAAGTAATGCA+AGG | + | chr8.1:6741278-6741297 | None:intergenic | 25.0% |
| ! | AATGATGTTTATGACACATA+AGG | + | chr8.1:6742720-6742739 | None:intergenic | 25.0% |
| ! | ATAATACAATTGAATCCACA+TGG | - | chr8.1:6743100-6743119 | MS.gene26505:intron | 25.0% |
| ! | ATGTAACTTACCTTAAATGA+AGG | + | chr8.1:6743067-6743086 | None:intergenic | 25.0% |
| ! | ATGTTATATTATAAGAAGGC+AGG | - | chr8.1:6741884-6741903 | MS.gene26505:intron | 25.0% |
| ! | ATTGAAAATACGAAAACACT+TGG | + | chr8.1:6741123-6741142 | None:intergenic | 25.0% |
| ! | ATTTACAAGAATATATCCGT+TGG | + | chr8.1:6741811-6741830 | None:intergenic | 25.0% |
| ! | CAAATTGTGAAAATTCCAAA+TGG | - | chr8.1:6741183-6741202 | MS.gene26505:intron | 25.0% |
| ! | CATTGAAATCAGTTTATACT+GGG | + | chr8.1:6743783-6743802 | None:intergenic | 25.0% |
| ! | GATGTATTTGTGAAACAAAA+AGG | - | chr8.1:6743985-6744004 | MS.gene26505:CDS | 25.0% |
| ! | GTATATCCAAACAAACATTA+AGG | + | chr8.1:6740948-6740967 | None:intergenic | 25.0% |
| ! | GTCAAAAAAGCTAAATTTCT+AGG | + | chr8.1:6742238-6742257 | None:intergenic | 25.0% |
| ! | TAATCTATATCTCAAGTTTG+TGG | - | chr8.1:6741520-6741539 | MS.gene26505:intron | 25.0% |
| ! | TATTCTTGTAAATGCTAATG+GGG | - | chr8.1:6741818-6741837 | MS.gene26505:CDS | 25.0% |
| ! | TGTAACTTACCTTAAATGAA+GGG | + | chr8.1:6743066-6743085 | None:intergenic | 25.0% |
| !! | ATATATTTGTAGTGGCTTTA+AGG | - | chr8.1:6742464-6742483 | MS.gene26505:intron | 25.0% |
| !! | TAAATGGTATGTTCACATTT+TGG | + | chr8.1:6740857-6740876 | None:intergenic | 25.0% |
| !! | TTGCATTACTTTCTTTTGTT+TGG | - | chr8.1:6741277-6741296 | MS.gene26505:CDS | 25.0% |
| !! | TTTTGGATTTTATGGTGTTT+TGG | - | chr8.1:6740431-6740450 | MS.gene26505:CDS | 25.0% |
| !!! | AAGTTTGCTGTTTTTGTTTT+TGG | - | chr8.1:6740414-6740433 | MS.gene26505:CDS | 25.0% |
| !!! | ATAAGATTGAGCTTTTTCAA+TGG | + | chr8.1:6740206-6740225 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATGATTCTTGAA+AGG | + | chr8.1:6743527-6743546 | None:intergenic | 25.0% |
| !!! | ATTTGTTTGGTTTTCAATGT+AGG | - | chr8.1:6741548-6741567 | MS.gene26505:intron | 25.0% |
| !!! | CAAAGTTTGCTTTTTTATTC+AGG | - | chr8.1:6741601-6741620 | MS.gene26505:intron | 25.0% |
| !!! | CATTTGGAATTTTCACAATT+TGG | + | chr8.1:6741185-6741204 | None:intergenic | 25.0% |
| !!! | GAAGAGTTCTGTTTTTTTTT+TGG | - | chr8.1:6740313-6740332 | MS.gene26505:CDS | 25.0% |
| !!! | TGCATTACTTTCTTTTGTTT+GGG | - | chr8.1:6741278-6741297 | MS.gene26505:CDS | 25.0% |
| !!! | TGTGGAATTTTTTTTGACAT+TGG | + | chr8.1:6742754-6742773 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGTAATTAGTGTG+TGG | - | chr8.1:6740327-6740346 | MS.gene26505:CDS | 25.0% |
| AAAGATATGCTTGCATTTAC+TGG | - | chr8.1:6743209-6743228 | MS.gene26505:intron | 30.0% | |
| AAATCCAAAATCTACAGCAA+TGG | + | chr8.1:6740080-6740099 | None:intergenic | 30.0% | |
| AAATTATTGAAAGTGAGTGG+AGG | + | chr8.1:6741764-6741783 | None:intergenic | 30.0% | |
| AACAAAGAAGAGATAGAGTA+AGG | + | chr8.1:6743178-6743197 | None:intergenic | 30.0% | |
| AATTATTGAAAGTGAGTGGA+GGG | + | chr8.1:6741763-6741782 | None:intergenic | 30.0% | |
| ATTCTTGTAAATGCTAATGG+GGG | - | chr8.1:6741819-6741838 | MS.gene26505:CDS | 30.0% | |
| ATTGTATCTTACACTGCAAA+GGG | - | chr8.1:6740249-6740268 | MS.gene26505:CDS | 30.0% | |
| CAAGAATCATCAAAACATGT+TGG | - | chr8.1:6743529-6743548 | MS.gene26505:intron | 30.0% | |
| CCATTGAAATCAGTTTATAC+TGG | + | chr8.1:6743784-6743803 | None:intergenic | 30.0% | |
| CTATAACATCATGCTTTGTA+TGG | - | chr8.1:6740379-6740398 | MS.gene26505:CDS | 30.0% | |
| CTATATAAAGACAAGATGGA+TGG | + | chr8.1:6742673-6742692 | None:intergenic | 30.0% | |
| CTTTCTTACCTCTTTAGATT+TGG | - | chr8.1:6742049-6742068 | MS.gene26505:intron | 30.0% | |
| GAAAACTAGTTATAGCTTTC+TGG | + | chr8.1:6742345-6742364 | None:intergenic | 30.0% | |
| GAACATACCATTTAGTAGTA+GGG | - | chr8.1:6740863-6740882 | MS.gene26505:CDS | 30.0% | |
| GATCTCATTATAAATCCATG+TGG | + | chr8.1:6743118-6743137 | None:intergenic | 30.0% | |
| GGAAGGAAAAAGAGATTAAT+GGG | - | chr8.1:6743300-6743319 | MS.gene26505:intron | 30.0% | |
| GTATTTCTTTACACTTACGA+TGG | - | chr8.1:6743587-6743606 | MS.gene26505:CDS | 30.0% | |
| TACAAAGCATGATGTTATAG+TGG | + | chr8.1:6740379-6740398 | None:intergenic | 30.0% | |
| TAGAGTAAGGTGATTAGAAA+TGG | + | chr8.1:6743165-6743184 | None:intergenic | 30.0% | |
| TCTCAAAAACTCCAATATCT+TGG | - | chr8.1:6742580-6742599 | MS.gene26505:intron | 30.0% | |
| TGAAAAAGCTCAATCTTATC+AGG | - | chr8.1:6740207-6740226 | MS.gene26505:CDS | 30.0% | |
| TGAACATACCATTTAGTAGT+AGG | - | chr8.1:6740862-6740881 | MS.gene26505:CDS | 30.0% | |
| TGAAGAATTTGGAAACAAAC+TGG | - | chr8.1:6743004-6743023 | MS.gene26505:intron | 30.0% | |
| TGGAAGGAAAAAGAGATTAA+TGG | - | chr8.1:6743299-6743318 | MS.gene26505:intron | 30.0% | |
| TGTGAAAATTCCAAATGGTA+GGG | - | chr8.1:6741188-6741207 | MS.gene26505:CDS | 30.0% | |
| TTACACTTACGATGGAAATA+TGG | - | chr8.1:6743595-6743614 | MS.gene26505:CDS | 30.0% | |
| TTATATTATAAGAAGGCAGG+CGG | - | chr8.1:6741887-6741906 | MS.gene26505:intron | 30.0% | |
| TTATTACTTGTCTGGATTGA+TGG | + | chr8.1:6743666-6743685 | None:intergenic | 30.0% | |
| TTGTGAAAATTCCAAATGGT+AGG | - | chr8.1:6741187-6741206 | MS.gene26505:CDS | 30.0% | |
| TTGTTTCCAAATTCTTCAAC+TGG | + | chr8.1:6743002-6743021 | None:intergenic | 30.0% | |
| TTTAGAGAGAAGAAAAAGCT+TGG | - | chr8.1:6740097-6740116 | MS.gene26505:intron | 30.0% | |
| TTTGTTTCACAAATACATCC+TGG | + | chr8.1:6743984-6744003 | None:intergenic | 30.0% | |
| ! | ACAATCATCCCAACTTTTAA+AGG | - | chr8.1:6742305-6742324 | MS.gene26505:CDS | 30.0% |
| ! | ACACCATACCAACTTTTATA+TGG | - | chr8.1:6741085-6741104 | MS.gene26505:intron | 30.0% |
| ! | ATGCTTTTATGCAATCAACT+AGG | - | chr8.1:6740670-6740689 | MS.gene26505:intron | 30.0% |
| ! | CAATCATCCCAACTTTTAAA+GGG | - | chr8.1:6742306-6742325 | MS.gene26505:CDS | 30.0% |
| ! | CAATCTTCCCTTTAAAAGTT+GGG | + | chr8.1:6742316-6742335 | None:intergenic | 30.0% |
| ! | CCAGTATAAACTGATTTCAA+TGG | - | chr8.1:6743781-6743800 | MS.gene26505:CDS | 30.0% |
| ! | CTTAGTTTCTGTATGGATTT+TGG | + | chr8.1:6742942-6742961 | None:intergenic | 30.0% |
| ! | CTTCTAACATGAAGTTTTTG+CGG | - | chr8.1:6743712-6743731 | MS.gene26505:CDS | 30.0% |
| ! | GCATTTTATTGATACACTGA+AGG | - | chr8.1:6742503-6742522 | MS.gene26505:intron | 30.0% |
| ! | TAAATTTTGAGCACAGGTTA+TGG | + | chr8.1:6742616-6742635 | None:intergenic | 30.0% |
| ! | TGTTAGTAATTTTTGTTGCG+TGG | - | chr8.1:6740641-6740660 | MS.gene26505:intron | 30.0% |
| !! | GATATTGGAGTTTTTGAGAA+CGG | + | chr8.1:6742579-6742598 | None:intergenic | 30.0% |
| !! | GCATTACTTTCTTTTGTTTG+GGG | - | chr8.1:6741279-6741298 | MS.gene26505:CDS | 30.0% |
| !! | GTTTGTGGACTTAATTTGTT+TGG | - | chr8.1:6741535-6741554 | MS.gene26505:intron | 30.0% |
| !! | TAAAAGCTTTCTTCTAGCTT+TGG | + | chr8.1:6743948-6743967 | None:intergenic | 30.0% |
| !! | TGTTAAACTTGTTGATCAGT+TGG | - | chr8.1:6743824-6743843 | MS.gene26505:CDS | 30.0% |
| !!! | AAAGGGTCAATTCAGTTTTT+TGG | - | chr8.1:6740266-6740285 | MS.gene26505:CDS | 30.0% |
| !!! | TCTATGAAGTTTTTTCACCT+TGG | + | chr8.1:6743883-6743902 | None:intergenic | 30.0% |
| AAAGAAATACGTCACTCTGA+AGG | + | chr8.1:6743577-6743596 | None:intergenic | 35.0% | |
| AAGAAATACGTCACTCTGAA+GGG | + | chr8.1:6743576-6743595 | None:intergenic | 35.0% | |
| AAGAGATTAATGGGACTGAA+AGG | - | chr8.1:6743309-6743328 | MS.gene26505:intron | 35.0% | |
| AATCATCAAAACATGTTGGC+TGG | - | chr8.1:6743533-6743552 | MS.gene26505:intron | 35.0% | |
| ACTCCTATATGCATAACCAA+GGG | + | chr8.1:6741421-6741440 | None:intergenic | 35.0% | |
| AGAACCTCTGTCTTGTAATA+AGG | + | chr8.1:6742849-6742868 | None:intergenic | 35.0% | |
| AGAAGAAAAAGCTTGGACAT+TGG | - | chr8.1:6740104-6740123 | MS.gene26505:intron | 35.0% | |
| AGAGGAATGAGAGAAAATGT+TGG | + | chr8.1:6743480-6743499 | None:intergenic | 35.0% | |
| AGGAATGAGAGAAAATGTTG+GGG | + | chr8.1:6743478-6743497 | None:intergenic | 35.0% | |
| AGGGATGCAATTATTTGATG+TGG | + | chr8.1:6742772-6742791 | None:intergenic | 35.0% | |
| CCAATCATCCAAATCTAAAG+AGG | + | chr8.1:6742060-6742079 | None:intergenic | 35.0% | |
| CCATCTTGTCTTTATATAGC+CGG | - | chr8.1:6742674-6742693 | MS.gene26505:intron | 35.0% | |
| CCTAAATCAGATGAGATTTG+GGG | - | chr8.1:6741842-6741861 | MS.gene26505:intron | 35.0% | |
| CCTCTTTAGATTTGGATGAT+TGG | - | chr8.1:6742057-6742076 | MS.gene26505:intron | 35.0% | |
| CGGCTAAGTTGTTAAGTAAA+CGG | - | chr8.1:6742694-6742713 | MS.gene26505:intron | 35.0% | |
| CGTTTACTTAACAACTTAGC+CGG | + | chr8.1:6742696-6742715 | None:intergenic | 35.0% | |
| CTCAACTGCATAATAGGAAA+AGG | + | chr8.1:6741727-6741746 | None:intergenic | 35.0% | |
| CTTAAATGAAGGGCAAGATA+AGG | + | chr8.1:6743056-6743075 | None:intergenic | 35.0% | |
| CTTATCTTGCCCTTCATTTA+AGG | - | chr8.1:6743054-6743073 | MS.gene26505:intron | 35.0% | |
| GAGGAATGAGAGAAAATGTT+GGG | + | chr8.1:6743479-6743498 | None:intergenic | 35.0% | |
| GATTGTATCTTACACTGCAA+AGG | - | chr8.1:6740248-6740267 | MS.gene26505:CDS | 35.0% | |
| GATTTACCACATTCTTGTTG+AGG | - | chr8.1:6742643-6742662 | MS.gene26505:intron | 35.0% | |
| GCCTAAATCAGATGAGATTT+GGG | - | chr8.1:6741841-6741860 | MS.gene26505:intron | 35.0% | |
| GGAATACTCAACTGCATAAT+AGG | + | chr8.1:6741733-6741752 | None:intergenic | 35.0% | |
| GGGATGATTGTCTAAAGAAA+AGG | + | chr8.1:6742296-6742315 | None:intergenic | 35.0% | |
| GTTAAATGGATCCAAACTTG+TGG | + | chr8.1:6740987-6741006 | None:intergenic | 35.0% | |
| GTTCTTAAGATTTGTGCTAC+TGG | - | chr8.1:6740166-6740185 | MS.gene26505:CDS | 35.0% | |
| GTTGTCCACCATATAAAAGT+TGG | + | chr8.1:6741096-6741115 | None:intergenic | 35.0% | |
| TACACGCCTTAATGTTTGTT+TGG | - | chr8.1:6740939-6740958 | MS.gene26505:intron | 35.0% | |
| TATGCATATAGGAGTCAAGA+AGG | - | chr8.1:6741426-6741445 | MS.gene26505:intron | 35.0% | |
| TCAATGCTCTGTAGTTTACA+CGG | + | chr8.1:6742968-6742987 | None:intergenic | 35.0% | |
| TCTAGAGAGATCGATACATT+GGG | + | chr8.1:6741666-6741685 | None:intergenic | 35.0% | |
| TGCTGTTGCTAAGATTATGA+AGG | - | chr8.1:6741962-6741981 | MS.gene26505:CDS | 35.0% | |
| TTACGATGGAAATATGGCAA+AGG | - | chr8.1:6743601-6743620 | MS.gene26505:CDS | 35.0% | |
| TTATTCAGGAATCAGAAGTC+TGG | - | chr8.1:6741615-6741634 | MS.gene26505:intron | 35.0% | |
| TTCTCTGAATCAAATTCCGA+TGG | - | chr8.1:6739788-6739807 | MS.gene26505:CDS | 35.0% | |
| TTGATGCCAGATATGTGATA+TGG | - | chr8.1:6741938-6741957 | MS.gene26505:CDS | 35.0% | |
| ! | AGGAAGTATGAAATATCTCG+AGG | - | chr8.1:6743445-6743464 | MS.gene26505:intron | 35.0% |
| ! | CCATACCAACTTTTATATGG+TGG | - | chr8.1:6741088-6741107 | MS.gene26505:intron | 35.0% |
| ! | GAATCCATTGCTGTAGATTT+TGG | - | chr8.1:6740073-6740092 | MS.gene26505:intron | 35.0% |
| ! | GCAATCTTCCCTTTAAAAGT+TGG | + | chr8.1:6742317-6742336 | None:intergenic | 35.0% |
| ! | GTCATTTGTTAATGTGTGCA+AGG | - | chr8.1:6740497-6740516 | MS.gene26505:CDS | 35.0% |
| ! | GTGGTAATGTCTCTACTATA+TGG | + | chr8.1:6742536-6742555 | None:intergenic | 35.0% |
| ! | TATAATGGGGTGAAGAACTT+AGG | - | chr8.1:6740772-6740791 | MS.gene26505:CDS | 35.0% |
| ! | TGGGTGAAATTTTCACTGTT+GGG | + | chr8.1:6741647-6741666 | None:intergenic | 35.0% |
| ! | TGTGGGGTTTGTTTGTTTAT+GGG | - | chr8.1:6740142-6740161 | MS.gene26505:CDS | 35.0% |
| ! | TTAAGATTTGTGCTACTGGT+TGG | - | chr8.1:6740170-6740189 | MS.gene26505:CDS | 35.0% |
| ! | TTCTAGAGAGATCGATACAT+TGG | + | chr8.1:6741667-6741686 | None:intergenic | 35.0% |
| ! | TTGACTCGAAAAGTAAAAGC+TGG | + | chr8.1:6740559-6740578 | None:intergenic | 35.0% |
| ! | TTGGGTGAAATTTTCACTGT+TGG | + | chr8.1:6741648-6741667 | None:intergenic | 35.0% |
| ! | TTGTGGGGTTTGTTTGTTTA+TGG | - | chr8.1:6740141-6740160 | MS.gene26505:CDS | 35.0% |
| !! | ACTTTCTTTTGTTTGGGGAT+TGG | - | chr8.1:6741284-6741303 | MS.gene26505:CDS | 35.0% |
| !! | AGAAAAGGCTTTGAAATCGA+TGG | + | chr8.1:6742281-6742300 | None:intergenic | 35.0% |
| !! | AGATCACTTTGTGCTGATTT+AGG | + | chr8.1:6742878-6742897 | None:intergenic | 35.0% |
| !! | ATTTCACTCATACTGATTCC+CGG | - | chr8.1:6742898-6742917 | MS.gene26505:intron | 35.0% |
| !! | CCACCATATAAAAGTTGGTA+TGG | + | chr8.1:6741091-6741110 | None:intergenic | 35.0% |
| !! | GCTTTAAGGATTTGTTTGAC+TGG | - | chr8.1:6742478-6742497 | MS.gene26505:intron | 35.0% |
| !!! | GATGTTTTTGGTGTTTTGTG+GGG | - | chr8.1:6740126-6740145 | MS.gene26505:CDS | 35.0% |
| !!! | GGATGTTTTTGGTGTTTTGT+GGG | - | chr8.1:6740125-6740144 | MS.gene26505:CDS | 35.0% |
| !!! | TGGATGTTTTTGGTGTTTTG+TGG | - | chr8.1:6740124-6740143 | MS.gene26505:CDS | 35.0% |
| AAACTTCATAGAGACCGTGA+CGG | - | chr8.1:6743891-6743910 | MS.gene26505:CDS | 40.0% | |
| AAATGGATCCAAACTTGTGG+TGG | + | chr8.1:6740984-6741003 | None:intergenic | 40.0% | |
| AACTCCAATATCTTGGTCCA+AGG | - | chr8.1:6742587-6742606 | MS.gene26505:intron | 40.0% | |
| AATATGGCAAAGGCTGTACA+AGG | - | chr8.1:6743611-6743630 | MS.gene26505:CDS | 40.0% | |
| AATTCCAAATGGTAGGGAGA+TGG | - | chr8.1:6741194-6741213 | MS.gene26505:CDS | 40.0% | |
| ACGGCATCTTAGTTTCTGTA+TGG | + | chr8.1:6742949-6742968 | None:intergenic | 40.0% | |
| AGTAGTAAGGAAGTTTCCCT+CGG | + | chr8.1:6743362-6743381 | None:intergenic | 40.0% | |
| AGTTTGGATCCATTTAACCG+TGG | - | chr8.1:6740989-6741008 | MS.gene26505:intron | 40.0% | |
| ATGCATAACCAAGGGATCTT+TGG | + | chr8.1:6741413-6741432 | None:intergenic | 40.0% | |
| CAGAAGAAGATGAAGAACTG+AGG | - | chr8.1:6743252-6743271 | MS.gene26505:intron | 40.0% | |
| CAGCAACCATATCACATATC+TGG | + | chr8.1:6741947-6741966 | None:intergenic | 40.0% | |
| CATGTTTCTCAGAGAGTTCA+TGG | - | chr8.1:6740016-6740035 | MS.gene26505:intron | 40.0% | |
| CCCCAAATCTCATCTGATTT+AGG | + | chr8.1:6741845-6741864 | None:intergenic | 40.0% | |
| CCGGCTATATAAAGACAAGA+TGG | + | chr8.1:6742677-6742696 | None:intergenic | 40.0% | |
| GACTCCTATATGCATAACCA+AGG | + | chr8.1:6741422-6741441 | None:intergenic | 40.0% | |
| GATCCATTTAACCGTGGAAA+TGG | - | chr8.1:6740995-6741014 | MS.gene26505:intron | 40.0% | |
| GATCCCTTGGTTATGCATAT+AGG | - | chr8.1:6741415-6741434 | MS.gene26505:intron | 40.0% | |
| GGCCTAAATCAGATGAGATT+TGG | - | chr8.1:6741840-6741859 | MS.gene26505:intron | 40.0% | |
| GGTTCCTTATTACAAGACAG+AGG | - | chr8.1:6742842-6742861 | MS.gene26505:intron | 40.0% | |
| GTGTGGATGTTTGTTCAAAG+TGG | - | chr8.1:6740344-6740363 | MS.gene26505:CDS | 40.0% | |
| GTTACCTTGGACCAAGATAT+TGG | + | chr8.1:6742594-6742613 | None:intergenic | 40.0% | |
| TACCACATTCTTGTTGAGGT+CGG | - | chr8.1:6742647-6742666 | MS.gene26505:intron | 40.0% | |
| TACGAGGTATGATCAAGAGA+AGG | + | chr8.1:6742002-6742021 | None:intergenic | 40.0% | |
| TCAGCTCCAGTTGAAGAATT+TGG | - | chr8.1:6742993-6743012 | MS.gene26505:intron | 40.0% | |
| TCTAACACTTCTTCCGATCT+GGG | + | chr8.1:6739962-6739981 | None:intergenic | 40.0% | |
| TCTCCATTTCCACGGTTAAA+TGG | + | chr8.1:6741001-6741020 | None:intergenic | 40.0% | |
| TCTTGATCATACCTCGTACT+GGG | - | chr8.1:6742004-6742023 | MS.gene26505:intron | 40.0% | |
| TGCAATCAACTAGGTTGCTT+TGG | - | chr8.1:6740679-6740698 | MS.gene26505:intron | 40.0% | |
| TGCTCCATATCTAAGAGAGT+CGG | - | chr8.1:6743914-6743933 | MS.gene26505:CDS | 40.0% | |
| TGGACGAAGGAAACATTTCT+TGG | - | chr8.1:6743844-6743863 | MS.gene26505:CDS | 40.0% | |
| TTGGAAAAAGTTCAGCTCCA+AGG | - | chr8.1:6743863-6743882 | MS.gene26505:CDS | 40.0% | |
| ! | AATCAACTAGGTTGCTTTGG+AGG | - | chr8.1:6740682-6740701 | MS.gene26505:intron | 40.0% |
| ! | ACCAAGTGCTCTAAGTAGTA+AGG | + | chr8.1:6743375-6743394 | None:intergenic | 40.0% |
| ! | ACCCATCACTTGATAGCAAA+AGG | + | chr8.1:6742387-6742406 | None:intergenic | 40.0% |
| ! | ACTCTAAAGACGGTAGAAAC+AGG | - | chr8.1:6741462-6741481 | MS.gene26505:intron | 40.0% |
| ! | ATATGAAGTTGGTCACTGGA+AGG | - | chr8.1:6743283-6743302 | MS.gene26505:intron | 40.0% |
| ! | CATGAACTCTCTGAGAAACA+TGG | + | chr8.1:6740018-6740037 | None:intergenic | 40.0% |
| ! | CCCATCACTTGATAGCAAAA+GGG | + | chr8.1:6742386-6742405 | None:intergenic | 40.0% |
| ! | GCTTGGACATTGGATGTTTT+TGG | - | chr8.1:6740114-6740133 | MS.gene26505:intron | 40.0% |
| ! | GTATCTAGAATGCAGCAGAA+TGG | - | chr8.1:6743026-6743045 | MS.gene26505:intron | 40.0% |
| ! | TCCTTACTACTTAGAGCACT+TGG | - | chr8.1:6743371-6743390 | MS.gene26505:intron | 40.0% |
| ! | TCTACAGCAATGGATTCAAG+TGG | + | chr8.1:6740070-6740089 | None:intergenic | 40.0% |
| ! | TGTGGAACGAACTCTAAAGA+CGG | - | chr8.1:6741452-6741471 | MS.gene26505:intron | 40.0% |
| ! | TTTTATGCAAATCCTCTGCC+AGG | - | chr8.1:6743963-6743982 | MS.gene26505:CDS | 40.0% |
| !! | ACCCTTTTGCTATCAAGTGA+TGG | - | chr8.1:6742382-6742401 | MS.gene26505:CDS | 40.0% |
| !! | ACTTTGTGCTGATTTAGGAG+GGG | + | chr8.1:6742873-6742892 | None:intergenic | 40.0% |
| !! | CACTTTGTGCTGATTTAGGA+GGG | + | chr8.1:6742874-6742893 | None:intergenic | 40.0% |
| !! | CCCTTTTGCTATCAAGTGAT+GGG | - | chr8.1:6742383-6742402 | MS.gene26505:CDS | 40.0% |
| !! | GATTTCAATGGTGTTGATGC+AGG | - | chr8.1:6743793-6743812 | MS.gene26505:CDS | 40.0% |
| !! | TCACTTTGTGCTGATTTAGG+AGG | + | chr8.1:6742875-6742894 | None:intergenic | 40.0% |
| !! | TTCTTTTGTTTGGGGATTGG+AGG | - | chr8.1:6741287-6741306 | MS.gene26505:CDS | 40.0% |
| AAGACGGTAGAAACAGGAGT+AGG | - | chr8.1:6741468-6741487 | MS.gene26505:intron | 45.0% | |
| AAGTGAGTGGAGGGATATCT+TGG | + | chr8.1:6741754-6741773 | None:intergenic | 45.0% | |
| AATGCCATTGTTAGCAAGCC+GGG | + | chr8.1:6742919-6742938 | None:intergenic | 45.0% | |
| ACATTACCACCTACCTATGC+TGG | - | chr8.1:6742546-6742565 | MS.gene26505:intron | 45.0% | |
| ACCATTTAGTAGTAGGGAGC+TGG | - | chr8.1:6740869-6740888 | MS.gene26505:CDS | 45.0% | |
| ACTGAAAGGAGATTGCTTGG+TGG | - | chr8.1:6743323-6743342 | MS.gene26505:intron | 45.0% | |
| ACTTGTCTCCACCACAAGTT+TGG | - | chr8.1:6740973-6740992 | MS.gene26505:intron | 45.0% | |
| AGCACAGGTTATGGTTACCT+TGG | + | chr8.1:6742607-6742626 | None:intergenic | 45.0% | |
| AGGCAGATGCGATATGAAGT+TGG | - | chr8.1:6743272-6743291 | MS.gene26505:intron | 45.0% | |
| AGGTAAATCCTGGTGTGTGA+TGG | + | chr8.1:6743401-6743420 | None:intergenic | 45.0% | |
| CAAAGGCTGTACAAGGTCAT+AGG | - | chr8.1:6743618-6743637 | MS.gene26505:CDS | 45.0% | |
| CAGGAACTATCTGACTCCAA+TGG | - | chr8.1:6741363-6741382 | MS.gene26505:intron | 45.0% | |
| CCATTTAGTAGTAGGGAGCT+GGG | - | chr8.1:6740870-6740889 | MS.gene26505:CDS | 45.0% | |
| CGATAGACCTGTTCAAAGCA+TGG | - | chr8.1:6742170-6742189 | MS.gene26505:intron | 45.0% | |
| CTCATCTTCAGAAGACAGAG+AGG | + | chr8.1:6743498-6743517 | None:intergenic | 45.0% | |
| CTCTAACACTTCTTCCGATC+TGG | + | chr8.1:6739963-6739982 | None:intergenic | 45.0% | |
| CTCTTGATCATACCTCGTAC+TGG | - | chr8.1:6742003-6742022 | MS.gene26505:intron | 45.0% | |
| CTTGTTGATCAGTTGGACGA+AGG | - | chr8.1:6743831-6743850 | MS.gene26505:CDS | 45.0% | |
| GAAGTTTCCCTCGGAGTTAA+TGG | + | chr8.1:6743353-6743372 | None:intergenic | 45.0% | |
| GAATGCCATTGTTAGCAAGC+CGG | + | chr8.1:6742920-6742939 | None:intergenic | 45.0% | |
| GAGTTCTCACTTTAGCAGTG+TGG | + | chr8.1:6741500-6741519 | None:intergenic | 45.0% | |
| GCAAATCAACTCACCCAGAT+CGG | - | chr8.1:6739946-6739965 | MS.gene26505:CDS | 45.0% | |
| GCTCCATATCTAAGAGAGTC+GGG | - | chr8.1:6743915-6743934 | MS.gene26505:CDS | 45.0% | |
| GTGCTAGATGCAAAGACCAA+CGG | - | chr8.1:6741792-6741811 | MS.gene26505:CDS | 45.0% | |
| GTTTCTCAGAGAGTTCATGG+TGG | - | chr8.1:6740019-6740038 | MS.gene26505:intron | 45.0% | |
| TAGGAGTCAAGAAGGAGATG+TGG | - | chr8.1:6741434-6741453 | MS.gene26505:intron | 45.0% | |
| TCACAAATACATCCTGGCAG+AGG | + | chr8.1:6743978-6743997 | None:intergenic | 45.0% | |
| TCTCCCGACTCTCTTAGATA+TGG | + | chr8.1:6743921-6743940 | None:intergenic | 45.0% | |
| TGAATTCCAGCATAGGTAGG+TGG | + | chr8.1:6742555-6742574 | None:intergenic | 45.0% | |
| TGATGACCATGCTTCGAAAC+AGG | + | chr8.1:6739986-6740005 | None:intergenic | 45.0% | |
| TTAGAGCCTGTTTCGAAGCA+TGG | - | chr8.1:6739977-6739996 | MS.gene26505:intron | 45.0% | |
| ! | ACAAAACGTGCGTCCACTTT+TGG | - | chr8.1:6741042-6741061 | MS.gene26505:intron | 45.0% |
| ! | AGTTCATGGTGGAGTTGTGA+AGG | - | chr8.1:6740030-6740049 | MS.gene26505:intron | 45.0% |
| ! | ATTTGTGCTACTGGTTGGCT+TGG | - | chr8.1:6740175-6740194 | MS.gene26505:CDS | 45.0% |
| ! | GTTCATGGTGGAGTTGTGAA+GGG | - | chr8.1:6740031-6740050 | MS.gene26505:intron | 45.0% |
| ! | TGCGATATGAAGTTGGTCAC+TGG | - | chr8.1:6743279-6743298 | MS.gene26505:intron | 45.0% |
| ! | TGCTATGCCATGCTTTGAAC+AGG | + | chr8.1:6742180-6742199 | None:intergenic | 45.0% |
| !! | CAAAACGTGCGTCCACTTTT+GGG | - | chr8.1:6741043-6741062 | MS.gene26505:intron | 45.0% |
| !! | TTAGATATGGAGCACCGTCA+CGG | + | chr8.1:6743908-6743927 | None:intergenic | 45.0% |
| !! | TTGGTTTTCCATCACACACC+AGG | - | chr8.1:6743390-6743409 | MS.gene26505:intron | 45.0% |
| !!! | ATTTAATTTAATATAATCTT+TGG | - | chr8.1:6740291-6740310 | MS.gene26505:CDS | 5.0% |
| ACCAGGATTTACCTCGTAGC+TGG | - | chr8.1:6743407-6743426 | MS.gene26505:intron | 50.0% | |
| ACGGTAGAAACAGGAGTAGG+TGG | - | chr8.1:6741471-6741490 | MS.gene26505:intron | 50.0% | |
| CATATGCTTCTCCAGCTACG+AGG | + | chr8.1:6743421-6743440 | None:intergenic | 50.0% | |
| CCCAGCTCCCTACTACTAAA+TGG | + | chr8.1:6740873-6740892 | None:intergenic | 50.0% | |
| CCGTAGCTTCTCCATTTCCA+CGG | + | chr8.1:6741009-6741028 | None:intergenic | 50.0% | |
| CCGTGGAAATGGAGAAGCTA+CGG | - | chr8.1:6741006-6741025 | MS.gene26505:intron | 50.0% | |
| GAACGGCTGAATTCCAGCAT+AGG | + | chr8.1:6742562-6742581 | None:intergenic | 50.0% | |
| GACTCCATCTCCCTACCATT+TGG | + | chr8.1:6741201-6741220 | None:intergenic | 50.0% | |
| GACTCGCTGTGAAACTCCAT+CGG | + | chr8.1:6739807-6739826 | None:intergenic | 50.0% | |
| GGCTGAATTCCAGCATAGGT+AGG | + | chr8.1:6742558-6742577 | None:intergenic | 50.0% | |
| GGGACTGAAAGGAGATTGCT+TGG | - | chr8.1:6743320-6743339 | MS.gene26505:intron | 50.0% | |
| GTCAACAGTCCACGTTTCTC+CGG | - | chr8.1:6739824-6739843 | MS.gene26505:CDS | 50.0% | |
| TCCAGCTACGAGGTAAATCC+TGG | + | chr8.1:6743411-6743430 | None:intergenic | 50.0% | |
| TGCGTTTGAAGGACTGAGCA+CGG | + | chr8.1:6739862-6739881 | None:intergenic | 50.0% | |
| TGGCTGTCCATTAACTCCGA+GGG | - | chr8.1:6743343-6743362 | MS.gene26505:intron | 50.0% | |
| TTAGTAGTAGGGAGCTGGGA+AGG | - | chr8.1:6740874-6740893 | MS.gene26505:CDS | 50.0% | |
| TTCAAACGCAACAACGCCAG+CGG | - | chr8.1:6739872-6739891 | MS.gene26505:CDS | 50.0% | |
| TTGTTTGGGGATTGGAGGCA+GGG | - | chr8.1:6741292-6741311 | MS.gene26505:CDS | 50.0% | |
| TTTCAGCCGCTACCCAAAAG+TGG | + | chr8.1:6741058-6741077 | None:intergenic | 50.0% | |
| TTTGTTTGGGGATTGGAGGC+AGG | - | chr8.1:6741291-6741310 | MS.gene26505:CDS | 50.0% | |
| ! | CTAGTGGACCAAAGATCCCT+TGG | - | chr8.1:6741402-6741421 | MS.gene26505:intron | 50.0% |
| ! | CTCGTAGCTGGAGAAGCATA+TGG | - | chr8.1:6743419-6743438 | MS.gene26505:intron | 50.0% |
| ! | GCTGGAGAAGCATATGGAAG+AGG | - | chr8.1:6743425-6743444 | MS.gene26505:intron | 50.0% |
| !! | GATTCCCGGCTTGCTAACAA+TGG | - | chr8.1:6742912-6742931 | MS.gene26505:intron | 50.0% |
| GCTGGCGTTGTTGCGTTTGA+AGG | + | chr8.1:6739873-6739892 | None:intergenic | 55.0% | |
| GGCCGACCTCAACAAGAATG+TGG | + | chr8.1:6742652-6742671 | None:intergenic | 55.0% | |
| GTGGCTGTCCATTAACTCCG+AGG | - | chr8.1:6743342-6743361 | MS.gene26505:intron | 55.0% | |
| !! | GTGCGTCCACTTTTGGGTAG+CGG | - | chr8.1:6741049-6741068 | MS.gene26505:intron | 55.0% |
| CCTCGTACTGGGCTGATCAG+AGG | - | chr8.1:6742015-6742034 | MS.gene26505:intron | 60.0% | |
| CCTCTGATCAGCCCAGTACG+AGG | + | chr8.1:6742018-6742037 | None:intergenic | 60.0% | |
| GACTGAGCACGGCGAGTCAT+CGG | + | chr8.1:6739851-6739870 | None:intergenic | 60.0% | |
| GTCATCGGACCGGAGAAACG+TGG | + | chr8.1:6739836-6739855 | None:intergenic | 60.0% | |
| AGCACGGCGAGTCATCGGAC+CGG | + | chr8.1:6739846-6739865 | None:intergenic | 65.0% | |
| GAGTGCGCCGCCGCTCACGA+CGG | + | chr8.1:6739903-6739922 | None:intergenic | 75.0% | |
| ! | AGCGGCGCCGCCGTCGTGAG+CGG | - | chr8.1:6739890-6739909 | MS.gene26505:CDS | 80.0% |
| ! | TGCGCCGCCGCTCACGACGG+CGG | + | chr8.1:6739900-6739919 | None:intergenic | 80.0% |
| ! | GCTCACGACGGCGGCGCCGC+TGG | + | chr8.1:6739891-6739910 | None:intergenic | 85.0% |
| ! | GGCGCCGCCGTCGTGAGCGG+CGG | - | chr8.1:6739893-6739912 | MS.gene26505:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 6739779 | 6744016 | 6739779 | ID=MS.gene26505 |
| chr8.1 | mRNA | 6739779 | 6744016 | 6739779 | ID=MS.gene26505.t1;Parent=MS.gene26505 |
| chr8.1 | exon | 6743567 | 6744016 | 6743567 | ID=MS.gene26505.t1.exon1;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6743567 | 6744016 | 6743567 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6742286 | 6742429 | 6742286 | ID=MS.gene26505.t1.exon2;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6742286 | 6742429 | 6742286 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6742100 | 6742172 | 6742100 | ID=MS.gene26505.t1.exon3;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6742100 | 6742172 | 6742100 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6741932 | 6742002 | 6741932 | ID=MS.gene26505.t1.exon4;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6741932 | 6742002 | 6741932 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6741759 | 6741847 | 6741759 | ID=MS.gene26505.t1.exon5;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6741759 | 6741847 | 6741759 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6741187 | 6741319 | 6741187 | ID=MS.gene26505.t1.exon6;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6741187 | 6741319 | 6741187 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6740720 | 6740952 | 6740720 | ID=MS.gene26505.t1.exon7;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6740720 | 6740952 | 6740720 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6740117 | 6740593 | 6740117 | ID=MS.gene26505.t1.exon8;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6740117 | 6740593 | 6740117 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| chr8.1 | exon | 6739779 | 6739980 | 6739779 | ID=MS.gene26505.t1.exon9;Parent=MS.gene26505.t1 |
| chr8.1 | CDS | 6739779 | 6739980 | 6739779 | ID=cds.MS.gene26505.t1;Parent=MS.gene26505.t1 |
| Gene Sequence |
| Protein sequence |